HEADER TRANSFERASE 05-SEP-23 8QGG TITLE CRYSTAL STRUCTURE OF NAD KINASE 1 FROM LISTERIA MONOCYTOGENES IN TITLE 2 COMPLEX WITH A DI-ADENOSINE DERIVATIVE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NAD KINASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ATP-DEPENDENT NAD KINASE; COMPND 5 EC: 2.7.1.23; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES EGD-E; SOURCE 3 ORGANISM_TAXID: 169963; SOURCE 4 GENE: NADK1, LMO0968; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS TETRAMERIC NAD-KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.GELIN,G.LABESSE,C.LIONNE REVDAT 1 19-MAR-25 8QGG 0 JRNL AUTH M.GELIN,G.LABESSE,D.CLEMENT,S.POCHET,C.LIONNE,C.LESEIGNEUR, JRNL AUTH 2 V.HUTEAU JRNL TITL CRYSTAL STRUCTURE OF NAD KINASE 1 FROM LISTERIA JRNL TITL 2 MONOCYTOGENES IN COMPLEX WITH A DI-ADENOSINE DERIVATIVE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.59 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.1_4122 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.59 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 55.55 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 69703 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 3439 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 55.5500 - 4.6500 0.97 2661 147 0.1952 0.1793 REMARK 3 2 4.6500 - 3.6900 0.94 2601 121 0.1559 0.1927 REMARK 3 3 3.6900 - 3.2300 0.92 2525 132 0.1679 0.1980 REMARK 3 4 3.2300 - 2.9300 0.95 2611 115 0.1966 0.2454 REMARK 3 5 2.9300 - 2.7200 0.95 2589 125 0.1938 0.2443 REMARK 3 6 2.7200 - 2.5600 0.95 2594 128 0.1791 0.2625 REMARK 3 7 2.5600 - 2.4300 0.97 2664 154 0.1633 0.1962 REMARK 3 8 2.4300 - 2.3300 0.98 2628 142 0.1671 0.2359 REMARK 3 9 2.3300 - 2.2400 0.97 2721 117 0.1656 0.2198 REMARK 3 10 2.2400 - 2.1600 0.98 2649 145 0.1635 0.2412 REMARK 3 11 2.1600 - 2.0900 0.97 2666 140 0.1619 0.2195 REMARK 3 12 2.0900 - 2.0300 0.97 2630 145 0.1544 0.2263 REMARK 3 13 2.0300 - 1.9800 0.97 2728 107 0.1513 0.2120 REMARK 3 14 1.9800 - 1.9300 0.97 2670 124 0.1566 0.1689 REMARK 3 15 1.9300 - 1.8900 0.97 2643 153 0.1911 0.2727 REMARK 3 16 1.8900 - 1.8500 0.97 2654 138 0.1744 0.2229 REMARK 3 17 1.8500 - 1.8100 0.98 2663 118 0.1699 0.2236 REMARK 3 18 1.8100 - 1.7800 0.98 2693 118 0.1975 0.2259 REMARK 3 19 1.7800 - 1.7400 0.98 2655 179 0.1946 0.2667 REMARK 3 20 1.7400 - 1.7100 0.97 2658 169 0.2015 0.2749 REMARK 3 21 1.7100 - 1.6900 0.98 2674 147 0.2213 0.2830 REMARK 3 22 1.6900 - 1.6600 0.98 2649 128 0.2255 0.2836 REMARK 3 23 1.6600 - 1.6400 0.98 2721 110 0.2494 0.2782 REMARK 3 24 1.6400 - 1.6100 0.98 2646 167 0.2479 0.3023 REMARK 3 25 1.6100 - 1.5900 0.99 2671 170 0.2706 0.2904 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.187 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.930 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.62 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2228 REMARK 3 ANGLE : 0.845 3020 REMARK 3 CHIRALITY : 0.056 325 REMARK 3 PLANARITY : 0.006 413 REMARK 3 DIHEDRAL : 15.340 847 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8QGG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-SEP-23. REMARK 100 THE DEPOSITION ID IS D_1292133166. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-MAR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.8-5.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96546 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 69703 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.282 REMARK 200 RESOLUTION RANGE LOW (A) : 55.550 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.03200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.59 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.62 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 1.08500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX, PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30 MM NABR, 220 MM KCITRATE, GLYCEROL REMARK 280 6%, 15-16% W/V PEG400, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 31.44900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.13950 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 59.19300 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 31.44900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.13950 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 59.19300 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 31.44900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 37.13950 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 59.19300 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 31.44900 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 37.13950 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 59.19300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 62.89800 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 62.89800 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 111 REMARK 465 GLY A 112 REMARK 465 LYS A 113 REMARK 465 LEU A 265 REMARK 465 GLU A 266 REMARK 465 HIS A 267 REMARK 465 HIS A 268 REMARK 465 HIS A 269 REMARK 465 HIS A 270 REMARK 465 HIS A 271 REMARK 465 HIS A 272 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 85 CG CD CE NZ REMARK 470 LYS A 108 CG CD CE NZ REMARK 470 GLN A 232 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 94 12.45 57.10 REMARK 500 ASN A 122 -68.23 -100.38 REMARK 500 ALA A 162 -129.06 -106.75 REMARK 500 ALA A 185 71.46 43.59 REMARK 500 HIS A 204 -10.61 79.29 REMARK 500 ASN A 213 -82.41 -125.51 REMARK 500 ASP A 222 -130.30 56.52 REMARK 500 GLU A 233 142.88 -170.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8A9V RELATED DB: PDB DBREF 8QGG A 1 264 UNP Q8Y8D7 NADK1_LISMO 1 264 SEQADV 8QGG LEU A 265 UNP Q8Y8D7 EXPRESSION TAG SEQADV 8QGG GLU A 266 UNP Q8Y8D7 EXPRESSION TAG SEQADV 8QGG HIS A 267 UNP Q8Y8D7 EXPRESSION TAG SEQADV 8QGG HIS A 268 UNP Q8Y8D7 EXPRESSION TAG SEQADV 8QGG HIS A 269 UNP Q8Y8D7 EXPRESSION TAG SEQADV 8QGG HIS A 270 UNP Q8Y8D7 EXPRESSION TAG SEQADV 8QGG HIS A 271 UNP Q8Y8D7 EXPRESSION TAG SEQADV 8QGG HIS A 272 UNP Q8Y8D7 EXPRESSION TAG SEQRES 1 A 272 MET LYS TYR MET ILE THR SER LYS GLY ASP GLU LYS SER SEQRES 2 A 272 ASP LEU LEU ARG LEU ASN MET ILE ALA GLY PHE GLY GLU SEQRES 3 A 272 TYR ASP MET GLU TYR ASP ASP VAL GLU PRO GLU ILE VAL SEQRES 4 A 272 ILE SER ILE GLY GLY ASP GLY THR PHE LEU SER ALA PHE SEQRES 5 A 272 HIS GLN TYR GLU GLU ARG LEU ASP GLU ILE ALA PHE ILE SEQRES 6 A 272 GLY ILE HIS THR GLY HIS LEU GLY PHE TYR ALA ASP TRP SEQRES 7 A 272 ARG PRO ALA GLU ALA ASP LYS LEU VAL LYS LEU LEU ALA SEQRES 8 A 272 LYS GLY GLU TYR GLN LYS VAL SER TYR PRO LEU LEU LYS SEQRES 9 A 272 THR THR VAL LYS TYR GLY ILE GLY LYS LYS GLU ALA THR SEQRES 10 A 272 TYR LEU ALA LEU ASN GLU SER THR VAL LYS SER SER GLY SEQRES 11 A 272 GLY PRO PHE VAL VAL ASP VAL VAL ILE ASN ASP ILE HIS SEQRES 12 A 272 PHE GLU ARG PHE ARG GLY ASP GLY LEU CYS MET SER THR SEQRES 13 A 272 PRO SER GLY THR THR ALA TYR ASN LYS SER LEU GLY GLY SEQRES 14 A 272 ALA LEU MET HIS PRO SER ILE GLU ALA MET GLN LEU THR SEQRES 15 A 272 GLU MET ALA SER ILE ASN ASN ARG VAL TYR ARG THR ILE SEQRES 16 A 272 GLY SER PRO LEU VAL PHE PRO LYS HIS HIS VAL VAL SER SEQRES 17 A 272 LEU GLN PRO VAL ASN ASP LYS ASP PHE GLN ILE SER VAL SEQRES 18 A 272 ASP HIS LEU SER ILE LEU HIS ARG ASP VAL GLN GLU ILE SEQRES 19 A 272 ARG TYR GLU VAL SER ALA LYS LYS ILE HIS PHE ALA ARG SEQRES 20 A 272 PHE ARG SER PHE PRO PHE TRP ARG ARG VAL HIS ASP SER SEQRES 21 A 272 PHE ILE GLU ASP LEU GLU HIS HIS HIS HIS HIS HIS HET CIT A 301 13 HET GOL A 302 6 HET UJT A 303 45 HETNAM CIT CITRIC ACID HETNAM GOL GLYCEROL HETNAM UJT (2~{R},3~{R},4~{S},5~{R})-2-(6-AMINOPURIN-9-YL)-5-[[3- HETNAM 2 UJT [6-AZANYL-9-[(2~{R},3~{R},4~{S},5~{R})-5- HETNAM 3 UJT (HYDROXYMETHYL)-3,4-BIS(OXIDANYL)OXOLAN-2-YL]PURIN-8- HETNAM 4 UJT YL]PROP-2-YNYL-(3-OXIDANYLPROPYL)AMINO]METHYL]OXOLANE- HETNAM 5 UJT 3,4-DIOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 CIT C6 H8 O7 FORMUL 3 GOL C3 H8 O3 FORMUL 4 UJT C26 H33 N11 O8 FORMUL 5 HOH *98(H2 O) HELIX 1 AA1 ASP A 10 GLY A 25 1 16 HELIX 2 AA2 GLY A 44 TYR A 55 1 12 HELIX 3 AA3 GLU A 56 ILE A 62 5 7 HELIX 4 AA4 ARG A 79 ALA A 81 5 3 HELIX 5 AA5 GLU A 82 GLY A 93 1 12 HELIX 6 AA6 PRO A 157 THR A 161 5 5 HELIX 7 AA7 ALA A 162 LEU A 167 1 6 HELIX 8 AA8 PRO A 252 ILE A 262 1 11 SHEET 1 AA1 4 GLU A 30 TYR A 31 0 SHEET 2 AA1 4 LYS A 2 SER A 7 1 N TYR A 3 O GLU A 30 SHEET 3 AA1 4 ILE A 38 GLY A 43 1 O ILE A 40 N THR A 6 SHEET 4 AA1 4 ALA A 63 HIS A 68 1 O ILE A 67 N SER A 41 SHEET 1 AA2 8 GLU A 115 ALA A 120 0 SHEET 2 AA2 8 GLN A 96 TYR A 109 -1 N VAL A 107 O ALA A 116 SHEET 3 AA2 8 VAL A 231 ARG A 247 -1 O PHE A 245 N VAL A 98 SHEET 4 AA2 8 VAL A 207 PRO A 211 -1 N LEU A 209 O ILE A 234 SHEET 5 AA2 8 PHE A 133 ILE A 139 -1 N VAL A 138 O SER A 208 SHEET 6 AA2 8 ILE A 142 SER A 155 -1 O GLU A 145 N VAL A 137 SHEET 7 AA2 8 ALA A 178 SER A 186 -1 O THR A 182 N CYS A 153 SHEET 8 AA2 8 LEU A 199 PRO A 202 -1 O LEU A 199 N LEU A 181 SHEET 1 AA3 9 GLU A 115 ALA A 120 0 SHEET 2 AA3 9 GLN A 96 TYR A 109 -1 N VAL A 107 O ALA A 116 SHEET 3 AA3 9 VAL A 231 ARG A 247 -1 O PHE A 245 N VAL A 98 SHEET 4 AA3 9 VAL A 207 PRO A 211 -1 N LEU A 209 O ILE A 234 SHEET 5 AA3 9 PHE A 133 ILE A 139 -1 N VAL A 138 O SER A 208 SHEET 6 AA3 9 ILE A 142 SER A 155 -1 O GLU A 145 N VAL A 137 SHEET 7 AA3 9 GLU A 123 SER A 128 -1 N SER A 124 O MET A 154 SHEET 8 AA3 9 PHE A 217 VAL A 221 -1 O GLN A 218 N LYS A 127 SHEET 9 AA3 9 LEU A 224 HIS A 228 -1 O HIS A 228 N PHE A 217 CRYST1 62.898 74.279 118.386 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015899 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013463 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008447 0.00000 CONECT 2108 2109 2110 2111 CONECT 2109 2108 CONECT 2110 2108 CONECT 2111 2108 2112 CONECT 2112 2111 2113 2114 2118 CONECT 2113 2112 CONECT 2114 2112 2115 CONECT 2115 2114 2116 2117 CONECT 2116 2115 CONECT 2117 2115 CONECT 2118 2112 2119 2120 CONECT 2119 2118 CONECT 2120 2118 CONECT 2121 2122 2123 CONECT 2122 2121 CONECT 2123 2121 2124 2125 CONECT 2124 2123 CONECT 2125 2123 2126 CONECT 2126 2125 CONECT 2127 2133 2145 CONECT 2128 2136 2164 CONECT 2129 2131 2164 CONECT 2130 2133 2142 CONECT 2131 2129 2147 CONECT 2132 2147 CONECT 2133 2127 2130 CONECT 2134 2160 CONECT 2135 2137 2146 2162 CONECT 2136 2128 2146 2161 CONECT 2137 2135 2140 2142 CONECT 2138 2142 2143 2145 CONECT 2139 2159 CONECT 2140 2137 2143 CONECT 2141 2158 CONECT 2142 2130 2137 2138 CONECT 2143 2138 2140 CONECT 2144 2145 CONECT 2145 2127 2138 2144 CONECT 2146 2135 2136 CONECT 2147 2131 2132 CONECT 2148 2149 2164 CONECT 2149 2148 2150 CONECT 2150 2149 2151 CONECT 2151 2150 2163 2165 CONECT 2152 2153 2155 2165 CONECT 2153 2152 2166 2167 CONECT 2154 2167 2168 CONECT 2155 2152 2163 2168 CONECT 2156 2160 2163 2169 CONECT 2157 2158 2159 2169 CONECT 2158 2141 2157 CONECT 2159 2139 2157 2160 CONECT 2160 2134 2156 2159 CONECT 2161 2136 2162 2170 CONECT 2162 2135 2161 2171 CONECT 2163 2151 2155 2156 CONECT 2164 2128 2129 2148 CONECT 2165 2151 2152 CONECT 2166 2153 CONECT 2167 2153 2154 CONECT 2168 2154 2155 CONECT 2169 2156 2157 CONECT 2170 2161 CONECT 2171 2162 MASTER 292 0 3 8 21 0 0 6 2240 1 64 21 END