HEADER VIRUS 05-SEP-23 8QGR TITLE STOPPER PROTEIN OF PHAGE 812 IN CLOSED CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN; COMPND 3 CHAIN: B; COMPND 4 SYNONYM: STOPPER PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS PHAGE 812; SOURCE 3 ORGANISM_TAXID: 307898; SOURCE 4 STRAIN: K1-420; SOURCE 5 GENE: 812_097, 812_099, 812A_099, 812F1_099, K1/420_099, K1_099; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET22T KEYWDS PHAGE, NECK, CONNECTOR, VIRUS EXPDTA X-RAY DIFFRACTION AUTHOR Z.CIENIKOVA,B.POPELAROVA,P.PLEVKA REVDAT 1 11-SEP-24 8QGR 0 JRNL AUTH Z.CIENIKOVA,J.NOVACEK,M.SIBOROVA,B.POPELAROVA,T.FUZIK, JRNL AUTH 2 M.BENESIK,P.BARDY,P.PLEVKA JRNL TITL GENOME ANCHORING, RETENTION, AND RELEASE BY NECK PROTEINS OF JRNL TITL 2 HERELLEVIRIDAE PHAGE 812 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0411 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.16 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 16649 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.802 REMARK 3 FREE R VALUE TEST SET COUNT : 1632 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1075 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.75 REMARK 3 BIN R VALUE (WORKING SET) : 0.2260 REMARK 3 BIN FREE R VALUE SET COUNT : 119 REMARK 3 BIN FREE R VALUE : 0.2690 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1815 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 146 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.37500 REMARK 3 B22 (A**2) : -1.37500 REMARK 3 B33 (A**2) : 4.46000 REMARK 3 B12 (A**2) : -0.68700 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.226 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.180 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.127 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.096 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1852 ; 0.004 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 1788 ; 0.000 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2504 ; 1.223 ; 1.665 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4127 ; 0.393 ; 1.576 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 218 ; 5.954 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 12 ; 3.017 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 347 ;11.680 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 281 ; 0.056 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2113 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 399 ; 0.000 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 332 ; 0.213 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 82 ; 0.178 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 922 ; 0.179 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 120 ; 0.199 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 881 ; 2.129 ; 3.105 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 881 ; 2.128 ; 3.105 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1096 ; 3.431 ; 5.535 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1097 ; 3.430 ; 5.537 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 971 ; 2.798 ; 3.572 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 972 ; 2.796 ; 3.573 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1408 ; 4.721 ; 6.372 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1409 ; 4.719 ; 6.372 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 8QGR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-SEP-23. REMARK 100 THE DEPOSITION ID IS D_1292132334. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-MAY-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : SI(111) SINGLE-CRYSTAL CHANNEL REMARK 200 -CUT REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 2016-11-01 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16664 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 37.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 11.70 REMARK 200 R MERGE (I) : 0.13000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.2600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.68900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.210 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6 M NACL, 8% PEG 6000, 20% GLYCEROL, REMARK 280 3% DEXTRAN SULPHATE SODIUM, PH 8.0, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 6 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z REMARK 290 6555 X-Y,X,Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 5 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 LYS B 3 REMARK 465 PRO B 4 REMARK 465 TYR B 5 REMARK 465 MET B 6 REMARK 465 ILE B 7 REMARK 465 GLY B 8 REMARK 465 ALA B 9 REMARK 465 ASN B 10 REMARK 465 SER B 11 REMARK 465 ASN B 12 REMARK 465 PRO B 13 REMARK 465 ASN B 14 REMARK 465 VAL B 15 REMARK 465 ILE B 16 REMARK 465 ASN B 17 REMARK 465 LYS B 18 REMARK 465 SER B 19 REMARK 465 THR B 20 REMARK 465 THR B 21 REMARK 465 TYR B 22 REMARK 465 THR B 23 REMARK 465 THR B 24 REMARK 465 THR B 25 REMARK 465 THR B 26 REMARK 465 GLN B 27 REMARK 465 ALA B 28 REMARK 465 ASP B 29 REMARK 465 GLU B 30 REMARK 465 GLN B 31 REMARK 465 ASP B 32 REMARK 465 LYS B 33 REMARK 465 PRO B 34 REMARK 465 LYS B 35 REMARK 465 TYR B 36 REMARK 465 THR B 37 REMARK 465 THR B 38 REMARK 465 ARG B 39 REMARK 465 LEU B 40 REMARK 465 GLN B 224 REMARK 465 TYR B 225 REMARK 465 THR B 226 REMARK 465 LYS B 227 REMARK 465 PHE B 228 REMARK 465 ASN B 229 REMARK 465 GLN B 230 REMARK 465 PRO B 231 REMARK 465 LYS B 232 REMARK 465 SER B 233 REMARK 465 LYS B 234 REMARK 465 PHE B 235 REMARK 465 GLU B 236 REMARK 465 GLY B 261 REMARK 465 ILE B 262 REMARK 465 ALA B 277 REMARK 465 SER B 278 REMARK 465 ASN B 279 REMARK 465 PRO B 280 REMARK 465 SER B 281 REMARK 465 ASN B 282 REMARK 465 LEU B 283 REMARK 465 GLY B 284 REMARK 465 GLY B 285 REMARK 465 PHE B 286 REMARK 465 PHE B 287 REMARK 465 GLY B 288 REMARK 465 GLY B 289 REMARK 465 ALA B 290 REMARK 465 PHE B 291 REMARK 465 LYS B 292 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG B 133 -19.77 83.56 REMARK 500 TYR B 163 -35.32 77.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 66 SG REMARK 620 2 CYS B 68 SG 111.5 REMARK 620 3 CYS B 80 SG 104.8 110.6 REMARK 620 4 CYS B 83 SG 112.9 108.5 108.4 REMARK 620 N 1 2 3 DBREF 8QGR B 1 292 UNP A1YTN7 A1YTN7_9CAUD 1 292 SEQRES 1 B 292 MET GLU LYS PRO TYR MET ILE GLY ALA ASN SER ASN PRO SEQRES 2 B 292 ASN VAL ILE ASN LYS SER THR THR TYR THR THR THR THR SEQRES 3 B 292 GLN ALA ASP GLU GLN ASP LYS PRO LYS TYR THR THR ARG SEQRES 4 B 292 LEU GLU PHE ASP THR ILE ASP MET ILE ARG PHE ILE ASN SEQRES 5 B 292 ASP ARG GLY ILE LYS VAL LEU TRP GLU GLU ALA TYR PHE SEQRES 6 B 292 CYS PRO CYS LEU ASN PRO ASP THR GLY HIS PRO ARG VAL SEQRES 7 B 292 ASP CYS PRO ARG CYS HIS GLY LYS GLY ILE ALA TYR LEU SEQRES 8 B 292 PRO PRO LYS GLU THR ILE MET ALA ILE GLN SER GLN GLU SEQRES 9 B 292 LYS GLY THR ASN GLN LEU ASP ILE GLY ILE LEU ASP THR SEQRES 10 B 292 GLY THR ALA ILE GLY THR THR GLN LEU GLU LYS ARG ILE SEQRES 11 B 292 SER TYR ARG ASP ARG PHE THR VAL PRO GLU VAL LEU MET SEQRES 12 B 292 PRO GLN GLN MET ILE TYR PHE VAL ASN LYS ASP ARG ILE SEQRES 13 B 292 LYS LYS GLY ILE PRO LEU TYR TYR ASP VAL LYS GLU ILE SEQRES 14 B 292 THR TYR ILE ALA THR GLN ASP GLY THR VAL TYR GLU GLU SEQRES 15 B 292 ASP TYR GLU ILE LYS ASN ASN ARG LEU TYR LEU ASN GLU SEQRES 16 B 292 LYS TYR GLU ASN HIS THR VAL THR LEU LYS ILE LEU MET SEQRES 17 B 292 THR LEU ARG TYR VAL VAL SER ASP ILE LEU LYS GLU SER SEQRES 18 B 292 ARG TYR GLN TYR THR LYS PHE ASN GLN PRO LYS SER LYS SEQRES 19 B 292 PHE GLU ASN LEU PRO GLN LYS LEU LEU LEU LYS ARG GLU SEQRES 20 B 292 ASP VAL ILE VAL LEU GLN ASP PRO TYR LYS VAL ASN ASP SEQRES 21 B 292 GLY ILE GLU GLU ASP LEU GLU ILE GLN VAL ASP ASP PRO SEQRES 22 B 292 LYS ALA SER ALA SER ASN PRO SER ASN LEU GLY GLY PHE SEQRES 23 B 292 PHE GLY GLY ALA PHE LYS HET ZN B 301 1 HETNAM ZN ZINC ION FORMUL 2 ZN ZN 2+ FORMUL 3 HOH *146(H2 O) HELIX 1 AA1 GLU B 41 GLY B 55 1 15 HELIX 2 AA2 GLU B 104 ASN B 108 5 5 HELIX 3 AA3 ASP B 111 ASP B 116 1 6 HELIX 4 AA4 ASN B 152 GLY B 159 1 8 HELIX 5 AA5 TYR B 180 GLU B 182 5 3 HELIX 6 AA6 GLU B 195 GLU B 198 5 4 HELIX 7 AA7 ASP B 248 ILE B 250 5 3 SHEET 1 AA1 9 GLY B 177 THR B 178 0 SHEET 2 AA1 9 VAL B 166 THR B 174 -1 N THR B 174 O GLY B 177 SHEET 3 AA1 9 THR B 201 LEU B 218 -1 O THR B 203 N ALA B 173 SHEET 4 AA1 9 PRO B 239 ARG B 246 -1 O LYS B 241 N LEU B 218 SHEET 5 AA1 9 THR B 119 GLN B 125 -1 N ALA B 120 O LEU B 244 SHEET 6 AA1 9 LYS B 94 GLN B 101 -1 N GLN B 101 O ILE B 121 SHEET 7 AA1 9 ILE B 56 GLU B 61 -1 N TRP B 60 O LYS B 94 SHEET 8 AA1 9 ARG B 135 PHE B 150 -1 O ARG B 135 N GLU B 61 SHEET 9 AA1 9 THR B 201 LEU B 218 -1 O MET B 208 N MET B 143 SHEET 1 AA2 2 ALA B 63 PHE B 65 0 SHEET 2 AA2 2 ILE B 88 TYR B 90 -1 O ALA B 89 N TYR B 64 SHEET 1 AA3 3 ILE B 160 PRO B 161 0 SHEET 2 AA3 3 ARG B 190 LEU B 193 -1 O LEU B 191 N ILE B 160 SHEET 3 AA3 3 TYR B 184 LYS B 187 -1 N GLU B 185 O TYR B 192 LINK SG CYS B 66 ZN ZN B 301 1555 1555 2.30 LINK SG CYS B 68 ZN ZN B 301 1555 1555 2.30 LINK SG CYS B 80 ZN ZN B 301 1555 1555 2.34 LINK SG CYS B 83 ZN ZN B 301 1555 1555 2.34 CRYST1 93.366 93.366 122.531 90.00 90.00 120.00 P 6 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010711 0.006184 0.000000 0.00000 SCALE2 0.000000 0.012367 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008161 0.00000 TER 1816 SER B 276 HETATM 1817 ZN ZN B 301 21.900 28.411 18.505 1.00 23.83 ZN0 HETATM 1818 O HOH B 401 22.625 13.614 6.226 1.00 46.26 O0 HETATM 1819 O HOH B 402 16.707 10.046 40.308 1.00 34.85 O0 HETATM 1820 O HOH B 403 47.202 17.405 24.077 1.00 21.24 O0 HETATM 1821 O HOH B 404 24.942 15.321 4.811 1.00 63.93 O0 HETATM 1822 O HOH B 405 13.806 9.365 31.470 1.00 36.75 O0 HETATM 1823 O HOH B 406 46.743 5.705 12.960 1.00 49.61 O0 HETATM 1824 O HOH B 407 45.589 8.832 25.970 1.00 34.50 O0 HETATM 1825 O HOH B 408 45.206 5.218 17.873 1.00 30.05 O0 HETATM 1826 O HOH B 409 37.120 24.905 15.647 1.00 45.64 O0 HETATM 1827 O HOH B 410 23.724 25.102 35.294 1.00 22.27 O0 HETATM 1828 O HOH B 411 13.910 35.447 34.576 1.00 40.13 O0 HETATM 1829 O HOH B 412 43.381 23.170 23.867 1.00 50.32 O0 HETATM 1830 O HOH B 413 17.578 22.832 28.466 1.00 24.51 O0 HETATM 1831 O HOH B 414 48.602 8.942 19.550 1.00 24.26 O0 HETATM 1832 O HOH B 415 2.159 8.090 48.137 1.00 47.87 O0 HETATM 1833 O HOH B 416 32.356 18.502 14.128 1.00 29.32 O0 HETATM 1834 O HOH B 417 5.781 13.966 48.569 1.00 49.71 O0 HETATM 1835 O HOH B 418 56.311 15.433 21.354 1.00 29.19 O0 HETATM 1836 O HOH B 419 20.048 16.998 48.314 1.00 31.85 O0 HETATM 1837 O HOH B 420 35.337 21.433 29.455 1.00 31.31 O0 HETATM 1838 O HOH B 421 32.685 20.015 38.102 1.00 49.91 O0 HETATM 1839 O HOH B 422 44.401 10.595 27.785 1.00 24.40 O0 HETATM 1840 O HOH B 423 26.676 20.480 16.642 1.00 34.11 O0 HETATM 1841 O HOH B 424 -0.055 21.335 38.188 1.00 47.99 O0 HETATM 1842 O HOH B 425 41.850 18.555 15.260 1.00 28.64 O0 HETATM 1843 O HOH B 426 33.718 27.499 25.364 1.00 42.34 O0 HETATM 1844 O HOH B 427 31.922 23.981 29.981 1.00 45.81 O0 HETATM 1845 O HOH B 428 33.639 3.419 34.392 1.00 21.40 O0 HETATM 1846 O HOH B 429 17.801 32.585 12.938 1.00 27.44 O0 HETATM 1847 O HOH B 430 24.310 29.317 25.860 1.00 21.45 O0 HETATM 1848 O HOH B 431 7.312 24.648 43.216 1.00 29.66 O0 HETATM 1849 O HOH B 432 13.573 17.594 46.377 1.00 27.89 O0 HETATM 1850 O HOH B 433 14.573 19.310 57.289 1.00 47.70 O0 HETATM 1851 O HOH B 434 15.553 27.398 19.366 1.00 25.41 O0 HETATM 1852 O HOH B 435 24.474 3.600 22.158 1.00 50.64 O0 HETATM 1853 O HOH B 436 26.159 6.236 17.054 1.00 35.91 O0 HETATM 1854 O HOH B 437 37.491 3.220 11.511 1.00 35.78 O0 HETATM 1855 O HOH B 438 37.255 29.469 25.253 1.00 22.54 O0 HETATM 1856 O HOH B 439 30.330 20.257 14.467 1.00 36.73 O0 HETATM 1857 O HOH B 440 33.815 4.681 24.516 1.00 18.23 O0 HETATM 1858 O HOH B 441 36.762 25.298 19.777 1.00 38.57 O0 HETATM 1859 O HOH B 442 25.751 15.477 33.237 1.00 18.04 O0 HETATM 1860 O HOH B 443 4.274 27.850 32.872 1.00 25.09 O0 HETATM 1861 O HOH B 444 25.218 29.836 30.769 1.00 26.77 O0 HETATM 1862 O HOH B 445 9.555 27.286 39.384 1.00 22.53 O0 HETATM 1863 O HOH B 446 25.321 5.860 1.982 1.00 62.06 O0 HETATM 1864 O HOH B 447 30.955 16.046 14.661 1.00 23.86 O0 HETATM 1865 O HOH B 448 41.835 7.021 33.177 1.00 46.40 O0 HETATM 1866 O HOH B 449 25.982 21.297 25.229 1.00 39.80 O0 HETATM 1867 O HOH B 450 40.947 -0.062 22.700 1.00 25.99 O0 HETATM 1868 O HOH B 451 2.900 19.151 36.795 1.00 20.26 O0 HETATM 1869 O HOH B 452 28.774 14.078 20.791 1.00 27.82 O0 HETATM 1870 O HOH B 453 21.079 32.032 34.835 1.00 28.63 O0 HETATM 1871 O HOH B 454 28.115 18.952 15.325 1.00 31.29 O0 HETATM 1872 O HOH B 455 6.591 18.659 49.009 1.00 44.13 O0 HETATM 1873 O HOH B 456 23.084 3.347 17.802 1.00 35.56 O0 HETATM 1874 O HOH B 457 0.068 23.346 43.679 1.00 37.17 O0 HETATM 1875 O HOH B 458 48.999 1.655 19.609 1.00 33.62 O0 HETATM 1876 O HOH B 459 5.260 16.224 35.540 1.00 23.10 O0 HETATM 1877 O HOH B 460 18.048 27.538 47.766 1.00 41.78 O0 HETATM 1878 O HOH B 461 38.816 15.986 15.835 1.00 28.57 O0 HETATM 1879 O HOH B 462 2.263 20.428 39.151 1.00 38.15 O0 HETATM 1880 O HOH B 463 26.891 24.151 33.046 1.00 31.96 O0 HETATM 1881 O HOH B 464 29.601 25.061 19.259 1.00 32.54 O0 HETATM 1882 O HOH B 465 27.098 26.921 12.901 1.00 47.23 O0 HETATM 1883 O HOH B 466 27.940 13.800 23.238 1.00 26.27 O0 HETATM 1884 O HOH B 467 28.142 18.076 31.892 1.00 20.06 O0 HETATM 1885 O HOH B 468 49.425 4.268 20.791 1.00 43.58 O0 HETATM 1886 O HOH B 469 28.301 21.095 44.198 1.00 26.92 O0 HETATM 1887 O HOH B 470 19.824 7.055 28.066 1.00 33.65 O0 HETATM 1888 O HOH B 471 20.271 5.927 31.375 1.00 32.13 O0 HETATM 1889 O HOH B 472 43.005 9.220 29.185 1.00 40.49 O0 HETATM 1890 O HOH B 473 50.106 14.093 11.512 1.00 40.56 O0 HETATM 1891 O HOH B 474 17.955 0.567 26.853 1.00 51.26 O0 HETATM 1892 O HOH B 475 36.725 22.204 27.147 1.00 26.42 O0 HETATM 1893 O HOH B 476 28.461 22.346 18.067 1.00 44.03 O0 HETATM 1894 O HOH B 477 25.451 32.987 28.701 1.00 29.97 O0 HETATM 1895 O HOH B 478 25.071 12.816 33.669 1.00 23.85 O0 HETATM 1896 O HOH B 479 41.868 -0.383 20.015 1.00 32.77 O0 HETATM 1897 O HOH B 480 27.453 21.065 48.228 1.00 36.98 O0 HETATM 1898 O HOH B 481 30.425 20.676 22.789 1.00 23.44 O0 HETATM 1899 O HOH B 482 23.525 1.844 20.244 1.00 41.91 O0 HETATM 1900 O HOH B 483 37.465 12.557 5.713 1.00 50.54 O0 HETATM 1901 O HOH B 484 19.918 34.417 34.692 1.00 33.01 O0 HETATM 1902 O HOH B 485 34.709 15.742 6.142 1.00 37.37 O0 HETATM 1903 O HOH B 486 41.555 22.833 13.619 1.00 43.06 O0 HETATM 1904 O HOH B 487 38.470 25.114 26.554 1.00 25.37 O0 HETATM 1905 O HOH B 488 6.073 25.355 25.595 1.00 22.53 O0 HETATM 1906 O HOH B 489 16.393 26.450 57.597 1.00 47.09 O0 HETATM 1907 O HOH B 490 43.614 6.387 26.609 1.00 30.45 O0 HETATM 1908 O HOH B 491 15.949 10.222 47.425 1.00 31.17 O0 HETATM 1909 O HOH B 492 46.751 17.949 13.130 1.00 38.97 O0 HETATM 1910 O HOH B 493 11.840 33.934 35.404 1.00 25.84 O0 HETATM 1911 O HOH B 494 50.293 2.359 23.211 1.00 38.93 O0 HETATM 1912 O HOH B 495 40.670 4.317 32.354 1.00 40.90 O0 HETATM 1913 O HOH B 496 47.829 1.189 22.269 1.00 26.64 O0 HETATM 1914 O HOH B 497 34.741 7.771 33.100 1.00 26.64 O0 HETATM 1915 O HOH B 498 17.770 19.456 20.018 1.00 35.52 O0 HETATM 1916 O HOH B 499 41.817 14.529 31.095 1.00 35.85 O0 HETATM 1917 O HOH B 500 49.810 10.258 26.430 1.00 35.20 O0 HETATM 1918 O HOH B 501 11.308 35.695 37.739 1.00 26.75 O0 HETATM 1919 O HOH B 502 19.978 -2.709 23.828 1.00 55.35 O0 HETATM 1920 O HOH B 503 2.612 19.016 41.583 1.00 26.70 O0 HETATM 1921 O HOH B 504 13.915 4.100 32.188 1.00 33.58 O0 HETATM 1922 O HOH B 505 43.008 14.819 28.918 1.00 41.95 O0 HETATM 1923 O HOH B 506 34.423 7.601 4.264 1.00 60.09 O0 HETATM 1924 O HOH B 507 22.654 20.153 28.763 1.00 31.31 O0 HETATM 1925 O HOH B 508 51.661 12.669 24.853 1.00 28.83 O0 HETATM 1926 O HOH B 509 23.704 9.396 21.917 1.00 27.67 O0 HETATM 1927 O HOH B 510 45.499 16.407 25.587 1.00 32.71 O0 HETATM 1928 O HOH B 511 31.855 10.543 8.922 1.00 52.69 O0 HETATM 1929 O HOH B 512 -0.436 21.711 42.019 1.00 35.47 O0 HETATM 1930 O HOH B 513 47.557 16.967 17.833 1.00 39.42 O0 HETATM 1931 O HOH B 514 50.083 4.118 27.522 1.00 39.43 O0 HETATM 1932 O HOH B 515 22.540 33.375 15.359 1.00 30.68 O0 HETATM 1933 O HOH B 516 43.435 18.461 26.304 1.00 23.74 O0 HETATM 1934 O HOH B 517 34.410 24.843 15.931 1.00 41.01 O0 HETATM 1935 O HOH B 518 48.431 18.099 22.342 1.00 34.30 O0 HETATM 1936 O HOH B 519 26.035 33.575 41.940 1.00 32.54 O0 HETATM 1937 O HOH B 520 30.167 22.461 20.559 1.00 42.12 O0 HETATM 1938 O HOH B 521 5.903 8.437 52.220 1.00 51.21 O0 HETATM 1939 O HOH B 522 25.701 29.299 27.993 1.00 35.73 O0 HETATM 1940 O HOH B 523 26.056 5.885 20.972 1.00 37.13 O0 HETATM 1941 O HOH B 524 53.548 16.616 18.435 1.00 43.39 O0 HETATM 1942 O HOH B 525 29.270 23.963 29.087 1.00 54.42 O0 HETATM 1943 O HOH B 526 18.636 10.938 45.570 1.00 51.49 O0 HETATM 1944 O HOH B 527 46.392 19.618 24.574 1.00 35.42 O0 HETATM 1945 O HOH B 528 30.861 23.589 36.678 1.00 41.90 O0 HETATM 1946 O HOH B 529 39.408 28.071 25.189 1.00 46.88 O0 HETATM 1947 O HOH B 530 21.809 -4.376 25.353 1.00 35.49 O0 HETATM 1948 O HOH B 531 14.132 38.200 35.461 1.00 32.79 O0 HETATM 1949 O HOH B 532 50.169 6.665 19.020 1.00 33.79 O0 HETATM 1950 O HOH B 533 45.613 18.366 18.099 1.00 43.54 O0 HETATM 1951 O HOH B 534 39.268 18.572 29.926 1.00 40.78 O0 HETATM 1952 O HOH B 535 24.761 31.452 16.251 1.00 26.56 O0 HETATM 1953 O HOH B 536 15.548 2.298 33.634 1.00 41.40 O0 HETATM 1954 O HOH B 537 26.583 29.822 14.031 1.00 36.30 O0 HETATM 1955 O HOH B 538 51.224 6.659 16.395 1.00 41.62 O0 HETATM 1956 O HOH B 539 17.635 20.219 27.119 1.00 24.74 O0 HETATM 1957 O HOH B 540 47.935 8.073 27.141 1.00 33.57 O0 HETATM 1958 O HOH B 541 35.670 19.615 38.596 1.00 44.31 O0 HETATM 1959 O HOH B 542 49.028 21.787 23.726 1.00 39.74 O0 HETATM 1960 O HOH B 543 20.871 18.494 24.436 1.00 39.24 O0 HETATM 1961 O HOH B 544 27.805 31.463 30.322 1.00 44.68 O0 HETATM 1962 O HOH B 545 52.685 13.450 12.968 1.00 48.03 O0 HETATM 1963 O HOH B 546 20.676 18.946 27.640 1.00 38.94 O0 CONECT 226 1817 CONECT 239 1817 CONECT 330 1817 CONECT 354 1817 CONECT 1817 226 239 330 354 MASTER 395 0 1 7 14 0 0 6 1962 1 5 23 END