HEADER OXIDOREDUCTASE 06-SEP-23 8QH4 TITLE CRYSTAL STRUCTURE OF REDUCED RESPIRATORY COMPLEX I SUBUNITS NUOEF FROM TITLE 2 AQUIFEX AEOLICUS BOUND TO OXIDIZED 3-ACETYLPYRIDINE ADENINE TITLE 3 DINUCLEOTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NADH-QUINONE OXIDOREDUCTASE SUBUNIT E; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: NADH DEHYDROGENASE I SUBUNIT E,NDH-1 SUBUNIT E; COMPND 5 EC: 7.1.1.-; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: NADH-QUINONE OXIDOREDUCTASE SUBUNIT F; COMPND 9 CHAIN: B, D; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES; COMPND 12 OTHER_DETAILS: SEQUENCE AGHHHHHH WAS ADDED TO THE C-TERMINUS VIA COMPND 13 MOLECULAR BIOLOGY TECHNIQUES TO ALLOW FOR AFFINITY PURIFICATION SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AQUIFEX AEOLICUS VF5; SOURCE 3 ORGANISM_TAXID: 224324; SOURCE 4 GENE: NUOE, AQ_574; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI B; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 37762; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-28B(+); SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: AQUIFEX AEOLICUS VF5; SOURCE 12 ORGANISM_TAXID: 224324; SOURCE 13 GENE: NUOF; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI B; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 37762; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2(DE3); SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PET-28B(+) KEYWDS COMPLEX I, RESPIRATORY CHAIN, 3-ACETYLPYRIDINE DINUCLEOTIDE, NADH- KEYWDS 2 BINDING, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR D.WOHLWEND,T.FRIEDRICH REVDAT 1 03-APR-24 8QH4 0 JRNL AUTH D.WOHLWEND,L.MERONO,S.BUCKA,K.RITTER,H.J.JESSEN,T.FRIEDRICH JRNL TITL STRUCTURES OF 3-ACETYLPYRIDINE ADENINE DINUCLEOTIDE AND JRNL TITL 2 ADP-RIBOSE BOUND TO THE ELECTRON INPUT MODULE OF RESPIRATORY JRNL TITL 3 COMPLEX I. JRNL REF STRUCTURE 2024 JRNL REFN ISSN 0969-2126 JRNL PMID 38503292 JRNL DOI 10.1016/J.STR.2024.02.013 REMARK 2 REMARK 2 RESOLUTION. 1.96 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0352 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.96 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.15 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 101256 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.181 REMARK 3 FREE R VALUE TEST SET COUNT : 5246 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.96 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.01 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7068 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2470 REMARK 3 BIN FREE R VALUE SET COUNT : 396 REMARK 3 BIN FREE R VALUE : 0.2610 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9084 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 214 REMARK 3 SOLVENT ATOMS : 872 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.86 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.58300 REMARK 3 B22 (A**2) : 1.35500 REMARK 3 B33 (A**2) : -0.77200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.165 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.146 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.112 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.850 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 9571 ; 0.005 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 8731 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 12981 ; 1.152 ; 1.651 REMARK 3 BOND ANGLES OTHERS (DEGREES): 20399 ; 0.400 ; 1.571 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1150 ; 6.208 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 53 ; 7.223 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1618 ;13.620 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1379 ; 0.059 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 10804 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1854 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1991 ; 0.215 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 57 ; 0.146 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 4634 ; 0.181 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 753 ; 0.158 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.137 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 10 ; 0.154 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4600 ; 0.666 ; 1.361 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 4600 ; 0.665 ; 1.362 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5750 ; 1.108 ; 2.036 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 5751 ; 1.108 ; 2.037 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4971 ; 0.972 ; 1.543 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 4944 ; 0.891 ; 1.516 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 7203 ; 1.573 ; 2.271 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 7162 ; 1.477 ; 2.228 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 200 REMARK 3 ORIGIN FOR THE GROUP (A): 27.2857 -10.6863 -60.2711 REMARK 3 T TENSOR REMARK 3 T11: 0.3182 T22: 0.0444 REMARK 3 T33: 0.1051 T12: -0.0160 REMARK 3 T13: -0.0722 T23: -0.0296 REMARK 3 L TENSOR REMARK 3 L11: 2.2848 L22: 0.9419 REMARK 3 L33: 1.6348 L12: -0.7627 REMARK 3 L13: 0.4923 L23: -0.0404 REMARK 3 S TENSOR REMARK 3 S11: 0.1942 S12: 0.1987 S13: -0.4724 REMARK 3 S21: -0.0957 S22: -0.0113 S23: 0.1587 REMARK 3 S31: 0.5629 S32: -0.0142 S33: -0.1829 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 0 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 ORIGIN FOR THE GROUP (A): 25.7723 12.5877 -54.5443 REMARK 3 T TENSOR REMARK 3 T11: 0.0954 T22: 0.0095 REMARK 3 T33: 0.0104 T12: -0.0099 REMARK 3 T13: -0.0044 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 1.3729 L22: 0.3684 REMARK 3 L33: 1.7666 L12: 0.0429 REMARK 3 L13: -0.1933 L23: -0.1662 REMARK 3 S TENSOR REMARK 3 S11: 0.0277 S12: 0.0352 S13: 0.0859 REMARK 3 S21: 0.0002 S22: 0.0519 S23: -0.0091 REMARK 3 S31: -0.1038 S32: -0.0249 S33: -0.0796 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 0 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 ORIGIN FOR THE GROUP (A): -4.1465 11.0901 -12.5482 REMARK 3 T TENSOR REMARK 3 T11: 0.2620 T22: 0.0617 REMARK 3 T33: 0.1303 T12: -0.0059 REMARK 3 T13: 0.0520 T23: -0.0556 REMARK 3 L TENSOR REMARK 3 L11: 2.8452 L22: 0.8861 REMARK 3 L33: 1.4495 L12: 0.6289 REMARK 3 L13: -0.3748 L23: -0.0306 REMARK 3 S TENSOR REMARK 3 S11: 0.1776 S12: -0.3060 S13: 0.5981 REMARK 3 S21: 0.0773 S22: -0.0653 S23: 0.1576 REMARK 3 S31: -0.4599 S32: 0.0492 S33: -0.1124 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 0 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 ORIGIN FOR THE GROUP (A): -5.6849 -11.9744 -18.6271 REMARK 3 T TENSOR REMARK 3 T11: 0.1073 T22: 0.0181 REMARK 3 T33: 0.0143 T12: 0.0276 REMARK 3 T13: -0.0061 T23: -0.0017 REMARK 3 L TENSOR REMARK 3 L11: 1.6655 L22: 0.3535 REMARK 3 L33: 1.5326 L12: -0.0305 REMARK 3 L13: 0.4650 L23: -0.0864 REMARK 3 S TENSOR REMARK 3 S11: 0.1026 S12: 0.0240 S13: -0.1398 REMARK 3 S21: -0.0070 S22: -0.0175 S23: -0.0063 REMARK 3 S31: 0.1279 S32: 0.0927 S33: -0.0851 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 8QH4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-SEP-23. REMARK 100 THE DEPOSITION ID IS D_1292133244. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-AUG-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.3 - 7.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.9 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 102156 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.960 REMARK 200 RESOLUTION RANGE LOW (A) : 48.153 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.96 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.99 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC 5.8.0352 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRISODIUM CITRATE, AMMONIUM SULFATE, REMARK 280 SODIUM CHLORIDE, TRIS, BISTRIS, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 281K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.76350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 95.00500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 58.30950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 95.00500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.76350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 58.30950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PHE A 2 REMARK 465 LYS A 3 REMARK 465 THR A 4 REMARK 465 MET B 1 REMARK 465 LYS B 419 REMARK 465 LYS B 420 REMARK 465 SER B 421 REMARK 465 ALA B 422 REMARK 465 SER B 423 REMARK 465 LEU B 424 REMARK 465 PRO B 425 REMARK 465 LEU B 426 REMARK 465 ALA B 427 REMARK 465 GLY B 428 REMARK 465 HIS B 429 REMARK 465 HIS B 430 REMARK 465 HIS B 431 REMARK 465 HIS B 432 REMARK 465 HIS B 433 REMARK 465 HIS B 434 REMARK 465 MET C 1 REMARK 465 PHE C 2 REMARK 465 LYS C 3 REMARK 465 THR C 4 REMARK 465 GLU C 5 REMARK 465 MET D 1 REMARK 465 LYS D 420 REMARK 465 SER D 421 REMARK 465 ALA D 422 REMARK 465 SER D 423 REMARK 465 LEU D 424 REMARK 465 PRO D 425 REMARK 465 LEU D 426 REMARK 465 ALA D 427 REMARK 465 GLY D 428 REMARK 465 HIS D 429 REMARK 465 HIS D 430 REMARK 465 HIS D 431 REMARK 465 HIS D 432 REMARK 465 HIS D 433 REMARK 465 HIS D 434 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR B 240 CD2 CE1 CE2 CZ OH REMARK 470 LYS D 36 CD CE NZ REMARK 470 LYS D 75 CD CE NZ REMARK 470 LYS D 153 NZ REMARK 470 LYS D 160 CE NZ REMARK 470 PRO D 199 CG REMARK 470 LYS D 209 CD CE NZ REMARK 470 LYS D 419 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU D 33 O HOH D 601 2.12 REMARK 500 O HOH B 838 O HOH B 852 2.13 REMARK 500 NH1 ARG A 158 O HOH A 301 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG A 158 OE1 GLN D 41 1655 2.02 REMARK 500 O HOH B 917 O HOH D 894 2554 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 127 123.74 -35.19 REMARK 500 ALA A 130 42.56 -140.70 REMARK 500 ASN A 140 -120.68 48.41 REMARK 500 MET B 18 -89.04 -119.58 REMARK 500 GLU B 95 96.29 0.47 REMARK 500 PHE B 101 24.62 -142.82 REMARK 500 TYR B 138 61.80 -112.78 REMARK 500 ALA B 177 33.35 -155.21 REMARK 500 MET B 309 53.40 -90.57 REMARK 500 THR B 390 -1.45 74.63 REMARK 500 TYR C 43 -178.29 -176.43 REMARK 500 ALA C 130 38.66 -143.15 REMARK 500 ASN C 140 -121.66 48.26 REMARK 500 MET D 18 -85.83 -120.54 REMARK 500 GLU D 95 89.26 6.65 REMARK 500 PHE D 101 25.69 -145.02 REMARK 500 TYR D 138 64.15 -112.20 REMARK 500 ALA D 177 33.40 -148.04 REMARK 500 THR D 390 -0.98 71.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 27 0.08 SIDE CHAIN REMARK 500 ARG C 82 0.12 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C 409 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH C 410 DISTANCE = 5.96 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 A3D B 503 REMARK 610 A3D D 503 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 201 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 86 SG REMARK 620 2 FES A 201 S1 105.4 REMARK 620 3 FES A 201 S2 116.6 104.8 REMARK 620 4 CYS A 91 SG 103.1 119.1 108.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 201 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 127 SG REMARK 620 2 FES A 201 S1 112.2 REMARK 620 3 FES A 201 S2 114.9 104.4 REMARK 620 4 CYS A 131 SG 89.3 120.8 115.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 510 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 396 O REMARK 620 2 GLY B 178 O 122.0 REMARK 620 3 GLU B 345 OE2 127.9 109.8 REMARK 620 4 HOH B 894 O 99.9 88.8 86.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 507 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 52 OE2 REMARK 620 2 HOH B 736 O 108.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 509 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 94 OD1 REMARK 620 2 ALA B 179 O 111.6 REMARK 620 3 HOH B 715 O 116.4 125.9 REMARK 620 4 HOH B 766 O 125.1 84.7 87.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 506 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 97 OE1 REMARK 620 2 A3D B 503 O2D 136.2 REMARK 620 3 HOH B 841 O 79.8 130.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 501 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 347 SG REMARK 620 2 SF4 B 501 S2 103.3 REMARK 620 3 SF4 B 501 S3 115.9 104.2 REMARK 620 4 SF4 B 501 S4 122.8 105.6 103.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 501 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 350 SG REMARK 620 2 SF4 B 501 S1 116.7 REMARK 620 3 SF4 B 501 S2 116.8 104.1 REMARK 620 4 SF4 B 501 S3 107.6 105.7 104.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 501 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 353 SG REMARK 620 2 SF4 B 501 S1 109.8 REMARK 620 3 SF4 B 501 S3 106.7 106.1 REMARK 620 4 SF4 B 501 S4 125.5 104.8 102.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 501 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 393 SG REMARK 620 2 SF4 B 501 S1 116.8 REMARK 620 3 SF4 B 501 S2 118.5 103.6 REMARK 620 4 SF4 B 501 S4 107.2 104.4 104.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES C 201 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 86 SG REMARK 620 2 FES C 201 S1 104.3 REMARK 620 3 FES C 201 S2 117.1 104.7 REMARK 620 4 CYS C 91 SG 104.3 118.4 108.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 204 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER C 88 OG REMARK 620 2 GLN C 126 OE1 82.4 REMARK 620 3 HOH D 699 O 112.4 108.9 REMARK 620 4 HOH D 785 O 79.5 136.1 115.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES C 201 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 127 SG REMARK 620 2 FES C 201 S1 112.4 REMARK 620 3 FES C 201 S2 114.3 104.5 REMARK 620 4 CYS C 131 SG 89.2 120.5 115.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K D 509 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 97 OE1 REMARK 620 2 A3D D 503 O2D 132.8 REMARK 620 3 HOH D 839 O 76.3 138.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA D 507 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 108 OE1 REMARK 620 2 HOH D 639 O 118.2 REMARK 620 3 HOH D 824 O 110.8 80.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA D 508 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 170 OE1 REMARK 620 2 GLU D 170 OE2 46.3 REMARK 620 3 HOH D 801 O 126.7 85.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 D 501 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 347 SG REMARK 620 2 SF4 D 501 S2 104.4 REMARK 620 3 SF4 D 501 S3 115.0 104.2 REMARK 620 4 SF4 D 501 S4 123.5 105.7 102.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 D 501 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 350 SG REMARK 620 2 SF4 D 501 S1 117.0 REMARK 620 3 SF4 D 501 S2 116.6 104.1 REMARK 620 4 SF4 D 501 S3 107.2 105.4 105.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 D 501 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 353 SG REMARK 620 2 SF4 D 501 S1 110.2 REMARK 620 3 SF4 D 501 S3 106.5 105.9 REMARK 620 4 SF4 D 501 S4 124.6 105.2 102.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 D 501 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 393 SG REMARK 620 2 SF4 D 501 S1 117.8 REMARK 620 3 SF4 D 501 S2 117.4 103.9 REMARK 620 4 SF4 D 501 S4 107.9 104.0 104.3 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8QG1 RELATED DB: PDB REMARK 900 8QG1 CONTAINS THE SAME, BUT OXIDIZED PROTEIN COMPLEXED WITH ADP- REMARK 900 RIBOSE DBREF 8QH4 A 1 160 UNP O66842 NUOE_AQUAE 1 160 DBREF 8QH4 B 1 426 UNP O66841 NUOF_AQUAE 1 426 DBREF 8QH4 C 1 160 UNP O66842 NUOE_AQUAE 1 160 DBREF 8QH4 D 1 426 UNP O66841 NUOF_AQUAE 1 426 SEQADV 8QH4 ALA B 427 UNP O66841 EXPRESSION TAG SEQADV 8QH4 GLY B 428 UNP O66841 EXPRESSION TAG SEQADV 8QH4 HIS B 429 UNP O66841 EXPRESSION TAG SEQADV 8QH4 HIS B 430 UNP O66841 EXPRESSION TAG SEQADV 8QH4 HIS B 431 UNP O66841 EXPRESSION TAG SEQADV 8QH4 HIS B 432 UNP O66841 EXPRESSION TAG SEQADV 8QH4 HIS B 433 UNP O66841 EXPRESSION TAG SEQADV 8QH4 HIS B 434 UNP O66841 EXPRESSION TAG SEQADV 8QH4 ALA D 427 UNP O66841 EXPRESSION TAG SEQADV 8QH4 GLY D 428 UNP O66841 EXPRESSION TAG SEQADV 8QH4 HIS D 429 UNP O66841 EXPRESSION TAG SEQADV 8QH4 HIS D 430 UNP O66841 EXPRESSION TAG SEQADV 8QH4 HIS D 431 UNP O66841 EXPRESSION TAG SEQADV 8QH4 HIS D 432 UNP O66841 EXPRESSION TAG SEQADV 8QH4 HIS D 433 UNP O66841 EXPRESSION TAG SEQADV 8QH4 HIS D 434 UNP O66841 EXPRESSION TAG SEQRES 1 A 160 MET PHE LYS THR GLU PHE GLU PHE PRO GLU GLU LEU LYS SEQRES 2 A 160 THR LYS LEU GLN GLU HIS ILE ASN TYR PHE PRO LYS LYS SEQRES 3 A 160 ARG GLN ALA ILE LEU LEU CYS LEU HIS GLU ILE GLN ASN SEQRES 4 A 160 TYR TYR GLY TYR ILE PRO PRO GLU SER LEU LYS PRO LEU SEQRES 5 A 160 ALA ASP MET LEU GLU LEU PRO LEU ASN HIS VAL GLU GLY SEQRES 6 A 160 VAL VAL ALA PHE TYR ASP MET PHE ASP ARG GLU ASP LYS SEQRES 7 A 160 ALA LYS TYR ARG ILE ARG VAL CYS VAL SER ILE VAL CYS SEQRES 8 A 160 HIS LEU MET GLY THR ASN LYS LEU LEU LYS ALA LEU GLU SEQRES 9 A 160 ASN ILE LEU GLY ILE LYS PRO GLY GLU VAL THR PRO ASP SEQRES 10 A 160 GLY LYS PHE LYS ILE VAL PRO VAL GLN CYS LEU GLY ALA SEQRES 11 A 160 CYS SER GLU ALA PRO VAL PHE MET VAL ASN ASP ASP GLU SEQRES 12 A 160 TYR LYS PHE GLU SER GLU VAL GLN LEU ASN GLU ILE LEU SEQRES 13 A 160 SER ARG TYR THR SEQRES 1 B 434 MET ARG SER TYR PRO ALA ILE PRO ARG ILE TYR ALA GLU SEQRES 2 B 434 THR THR LEU ASN MET LEU LEU LYS ARG ALA LYS LYS PRO SEQRES 3 B 434 ARG VAL HIS SER ILE ASP GLU TYR LEU LYS ASP GLY GLY SEQRES 4 B 434 TYR GLN ALA LEU GLU LYS ALA LEU ASN MET SER PRO GLU SEQRES 5 B 434 GLU ILE ILE ASP TRP VAL ASP LYS SER THR LEU ARG GLY SEQRES 6 B 434 ARG GLY GLY ALA GLY PHE PRO THR GLY LYS LYS TRP LYS SEQRES 7 B 434 PHE ALA VAL GLN ASN PRO GLY PRO ARG TYR PHE ILE CYS SEQRES 8 B 434 ASN ALA ASP GLU SER GLU PRO GLY THR PHE LYS ASP ARG SEQRES 9 B 434 ILE ILE ILE GLU ARG ASP PRO HIS LEU LEU ILE GLU GLY SEQRES 10 B 434 ILE ILE ILE SER SER TYR ALA ILE GLY ALA ASN GLU ALA SEQRES 11 B 434 TYR ILE TYR ILE ARG GLY GLU TYR PRO ALA GLY TYR TYR SEQRES 12 B 434 ILE LEU ARG ASP ALA ILE GLU GLU ALA LYS LYS LYS GLY SEQRES 13 B 434 PHE LEU GLY LYS ASN ILE LEU GLY SER GLY PHE ASP LEU SEQRES 14 B 434 GLU ILE TYR VAL ALA ARG GLY ALA GLY ALA TYR ILE CYS SEQRES 15 B 434 GLY GLU GLU THR ALA LEU ILE GLU SER LEU GLU GLY LYS SEQRES 16 B 434 ARG GLY HIS PRO ARG LEU LYS PRO PRO TYR PRO VAL GLN SEQRES 17 B 434 LYS GLY LEU TRP GLY LYS PRO THR VAL VAL ASN ASN VAL SEQRES 18 B 434 GLU THR ILE ALA ASN VAL PRO PHE ILE ILE SER MET GLY SEQRES 19 B 434 TRP GLU GLU TYR ARG TYR ILE GLY PRO SER ASP TYR ALA SEQRES 20 B 434 GLY PRO LYS LEU PHE PRO VAL SER GLY LYS VAL LYS LYS SEQRES 21 B 434 PRO GLY VAL TYR GLU LEU PRO MET ASN THR THR LEU ARG SEQRES 22 B 434 GLU VAL ILE PHE LYS TYR ALA GLY GLY THR LEU GLY ASN SEQRES 23 B 434 LYS LYS VAL LYS ALA VAL PHE SER GLY ALA LEU ASP CYS SEQRES 24 B 434 PHE SER SER GLU GLU LEU ASP ILE PRO MET ASP TYR SER SEQRES 25 B 434 PRO LEU GLY PHE GLY GLY THR GLY THR VAL ILE VAL LEU SEQRES 26 B 434 THR GLU GLU ASP ASP ILE VAL GLU ALA ALA LEU LYS ILE SEQRES 27 B 434 ALA GLU PHE TYR GLU HIS GLU THR CYS GLY GLN CYS THR SEQRES 28 B 434 PRO CYS ARG VAL GLY CYS TYR GLU GLN ALA ASN LEU LEU SEQRES 29 B 434 GLU LYS ILE TYR LYS GLY GLU ALA THR GLU GLN ASP TRP SEQRES 30 B 434 GLU GLY PHE ASP PHE VAL ASN ARG ASN ILE GLN PRO THR SEQRES 31 B 434 SER ILE CYS GLY LEU GLY ALA VAL ALA GLY ARG LEU ILE SEQRES 32 B 434 ARG GLN THR LEU GLU LYS PHE PRO GLU GLU TRP GLU LYS SEQRES 33 B 434 TYR ARG LYS LYS SER ALA SER LEU PRO LEU ALA GLY HIS SEQRES 34 B 434 HIS HIS HIS HIS HIS SEQRES 1 C 160 MET PHE LYS THR GLU PHE GLU PHE PRO GLU GLU LEU LYS SEQRES 2 C 160 THR LYS LEU GLN GLU HIS ILE ASN TYR PHE PRO LYS LYS SEQRES 3 C 160 ARG GLN ALA ILE LEU LEU CYS LEU HIS GLU ILE GLN ASN SEQRES 4 C 160 TYR TYR GLY TYR ILE PRO PRO GLU SER LEU LYS PRO LEU SEQRES 5 C 160 ALA ASP MET LEU GLU LEU PRO LEU ASN HIS VAL GLU GLY SEQRES 6 C 160 VAL VAL ALA PHE TYR ASP MET PHE ASP ARG GLU ASP LYS SEQRES 7 C 160 ALA LYS TYR ARG ILE ARG VAL CYS VAL SER ILE VAL CYS SEQRES 8 C 160 HIS LEU MET GLY THR ASN LYS LEU LEU LYS ALA LEU GLU SEQRES 9 C 160 ASN ILE LEU GLY ILE LYS PRO GLY GLU VAL THR PRO ASP SEQRES 10 C 160 GLY LYS PHE LYS ILE VAL PRO VAL GLN CYS LEU GLY ALA SEQRES 11 C 160 CYS SER GLU ALA PRO VAL PHE MET VAL ASN ASP ASP GLU SEQRES 12 C 160 TYR LYS PHE GLU SER GLU VAL GLN LEU ASN GLU ILE LEU SEQRES 13 C 160 SER ARG TYR THR SEQRES 1 D 434 MET ARG SER TYR PRO ALA ILE PRO ARG ILE TYR ALA GLU SEQRES 2 D 434 THR THR LEU ASN MET LEU LEU LYS ARG ALA LYS LYS PRO SEQRES 3 D 434 ARG VAL HIS SER ILE ASP GLU TYR LEU LYS ASP GLY GLY SEQRES 4 D 434 TYR GLN ALA LEU GLU LYS ALA LEU ASN MET SER PRO GLU SEQRES 5 D 434 GLU ILE ILE ASP TRP VAL ASP LYS SER THR LEU ARG GLY SEQRES 6 D 434 ARG GLY GLY ALA GLY PHE PRO THR GLY LYS LYS TRP LYS SEQRES 7 D 434 PHE ALA VAL GLN ASN PRO GLY PRO ARG TYR PHE ILE CYS SEQRES 8 D 434 ASN ALA ASP GLU SER GLU PRO GLY THR PHE LYS ASP ARG SEQRES 9 D 434 ILE ILE ILE GLU ARG ASP PRO HIS LEU LEU ILE GLU GLY SEQRES 10 D 434 ILE ILE ILE SER SER TYR ALA ILE GLY ALA ASN GLU ALA SEQRES 11 D 434 TYR ILE TYR ILE ARG GLY GLU TYR PRO ALA GLY TYR TYR SEQRES 12 D 434 ILE LEU ARG ASP ALA ILE GLU GLU ALA LYS LYS LYS GLY SEQRES 13 D 434 PHE LEU GLY LYS ASN ILE LEU GLY SER GLY PHE ASP LEU SEQRES 14 D 434 GLU ILE TYR VAL ALA ARG GLY ALA GLY ALA TYR ILE CYS SEQRES 15 D 434 GLY GLU GLU THR ALA LEU ILE GLU SER LEU GLU GLY LYS SEQRES 16 D 434 ARG GLY HIS PRO ARG LEU LYS PRO PRO TYR PRO VAL GLN SEQRES 17 D 434 LYS GLY LEU TRP GLY LYS PRO THR VAL VAL ASN ASN VAL SEQRES 18 D 434 GLU THR ILE ALA ASN VAL PRO PHE ILE ILE SER MET GLY SEQRES 19 D 434 TRP GLU GLU TYR ARG TYR ILE GLY PRO SER ASP TYR ALA SEQRES 20 D 434 GLY PRO LYS LEU PHE PRO VAL SER GLY LYS VAL LYS LYS SEQRES 21 D 434 PRO GLY VAL TYR GLU LEU PRO MET ASN THR THR LEU ARG SEQRES 22 D 434 GLU VAL ILE PHE LYS TYR ALA GLY GLY THR LEU GLY ASN SEQRES 23 D 434 LYS LYS VAL LYS ALA VAL PHE SER GLY ALA LEU ASP CYS SEQRES 24 D 434 PHE SER SER GLU GLU LEU ASP ILE PRO MET ASP TYR SER SEQRES 25 D 434 PRO LEU GLY PHE GLY GLY THR GLY THR VAL ILE VAL LEU SEQRES 26 D 434 THR GLU GLU ASP ASP ILE VAL GLU ALA ALA LEU LYS ILE SEQRES 27 D 434 ALA GLU PHE TYR GLU HIS GLU THR CYS GLY GLN CYS THR SEQRES 28 D 434 PRO CYS ARG VAL GLY CYS TYR GLU GLN ALA ASN LEU LEU SEQRES 29 D 434 GLU LYS ILE TYR LYS GLY GLU ALA THR GLU GLN ASP TRP SEQRES 30 D 434 GLU GLY PHE ASP PHE VAL ASN ARG ASN ILE GLN PRO THR SEQRES 31 D 434 SER ILE CYS GLY LEU GLY ALA VAL ALA GLY ARG LEU ILE SEQRES 32 D 434 ARG GLN THR LEU GLU LYS PHE PRO GLU GLU TRP GLU LYS SEQRES 33 D 434 TYR ARG LYS LYS SER ALA SER LEU PRO LEU ALA GLY HIS SEQRES 34 D 434 HIS HIS HIS HIS HIS HET FES A 201 4 HET SO4 A 202 5 HET SO4 A 203 5 HET SF4 B 501 8 HET FNR B 502 31 HET A3D B 503 36 HET GOL B 504 6 HET SO4 B 505 5 HET NA B 506 1 HET NA B 507 1 HET NA B 508 1 HET NA B 509 1 HET NA B 510 1 HET FES C 201 4 HET SO4 C 202 5 HET SO4 C 203 5 HET NA C 204 1 HET SF4 D 501 8 HET FNR D 502 31 HET A3D D 503 36 HET GOL D 504 6 HET SO4 D 505 5 HET SO4 D 506 5 HET NA D 507 1 HET NA D 508 1 HET K D 509 1 HETNAM FES FE2/S2 (INORGANIC) CLUSTER HETNAM SO4 SULFATE ION HETNAM SF4 IRON/SULFUR CLUSTER HETNAM FNR 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H- HETNAM 2 FNR BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D- HETNAM 3 FNR RIBITOL HETNAM A3D 3-ACETYLPYRIDINE ADENINE DINUCLEOTIDE HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETNAM K POTASSIUM ION HETSYN FNR TWO ELECTRON REDUCED FLAVIN MONONUCLEOTIDE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 FES 2(FE2 S2) FORMUL 6 SO4 7(O4 S 2-) FORMUL 8 SF4 2(FE4 S4) FORMUL 9 FNR 2(C17 H23 N4 O9 P) FORMUL 10 A3D 2(C22 H28 N6 O14 P2) FORMUL 11 GOL 2(C3 H8 O3) FORMUL 13 NA 8(NA 1+) FORMUL 30 K K 1+ FORMUL 31 HOH *872(H2 O) HELIX 1 AA1 PRO A 9 PHE A 23 1 15 HELIX 2 AA2 LYS A 25 GLN A 28 5 4 HELIX 3 AA3 ALA A 29 GLY A 42 1 14 HELIX 4 AA4 PRO A 45 GLU A 47 5 3 HELIX 5 AA5 SER A 48 GLU A 57 1 10 HELIX 6 AA6 PRO A 59 TYR A 70 1 12 HELIX 7 AA7 SER A 88 GLY A 95 1 8 HELIX 8 AA8 GLY A 95 GLY A 108 1 14 HELIX 9 AA9 ALA A 130 ALA A 134 5 5 HELIX 10 AB1 SER A 148 ARG A 158 1 11 HELIX 11 AB2 SER B 30 ASP B 37 1 8 HELIX 12 AB3 TYR B 40 LEU B 47 1 8 HELIX 13 AB4 SER B 50 SER B 61 1 12 HELIX 14 AB5 PRO B 72 GLN B 82 1 11 HELIX 15 AB6 PHE B 101 ASP B 110 1 10 HELIX 16 AB7 ASP B 110 GLY B 126 1 17 HELIX 17 AB8 TYR B 138 LYS B 155 1 18 HELIX 18 AB9 ASN B 161 SER B 165 5 5 HELIX 19 AC1 ALA B 179 GLY B 183 5 5 HELIX 20 AC2 GLU B 184 GLU B 193 1 10 HELIX 21 AC3 GLY B 210 LYS B 214 5 5 HELIX 22 AC4 VAL B 221 GLY B 234 1 14 HELIX 23 AC5 GLY B 234 TYR B 240 1 7 HELIX 24 AC6 THR B 271 LYS B 278 1 8 HELIX 25 AC7 THR B 283 LYS B 287 5 5 HELIX 26 AC8 GLU B 303 LEU B 305 5 3 HELIX 27 AC9 ASP B 330 THR B 346 1 17 HELIX 28 AD1 CYS B 350 LYS B 369 1 20 HELIX 29 AD2 THR B 373 ARG B 385 1 13 HELIX 30 AD3 CYS B 393 ALA B 399 1 7 HELIX 31 AD4 GLY B 400 PHE B 410 1 11 HELIX 32 AD5 PHE B 410 TYR B 417 1 8 HELIX 33 AD6 PRO C 9 PHE C 23 1 15 HELIX 34 AD7 LYS C 25 GLN C 28 5 4 HELIX 35 AD8 ALA C 29 GLY C 42 1 14 HELIX 36 AD9 PRO C 45 GLU C 47 5 3 HELIX 37 AE1 SER C 48 GLU C 57 1 10 HELIX 38 AE2 PRO C 59 TYR C 70 1 12 HELIX 39 AE3 SER C 88 GLY C 95 1 8 HELIX 40 AE4 GLY C 95 GLY C 108 1 14 HELIX 41 AE5 ALA C 130 ALA C 134 5 5 HELIX 42 AE6 SER C 148 SER C 157 1 10 HELIX 43 AE7 SER D 30 ASP D 37 1 8 HELIX 44 AE8 TYR D 40 ASN D 48 1 9 HELIX 45 AE9 SER D 50 SER D 61 1 12 HELIX 46 AF1 PRO D 72 GLN D 82 1 11 HELIX 47 AF2 PHE D 101 ASP D 110 1 10 HELIX 48 AF3 ASP D 110 GLY D 126 1 17 HELIX 49 AF4 TYR D 138 LYS D 155 1 18 HELIX 50 AF5 ASN D 161 SER D 165 5 5 HELIX 51 AF6 ALA D 179 GLY D 183 5 5 HELIX 52 AF7 GLU D 184 GLU D 193 1 10 HELIX 53 AF8 GLY D 210 LYS D 214 5 5 HELIX 54 AF9 VAL D 221 ASN D 226 1 6 HELIX 55 AG1 ASN D 226 GLY D 234 1 9 HELIX 56 AG2 GLY D 234 TYR D 240 1 7 HELIX 57 AG3 THR D 271 LYS D 278 1 8 HELIX 58 AG4 THR D 283 LYS D 287 5 5 HELIX 59 AG5 GLU D 303 LEU D 305 5 3 HELIX 60 AG6 ASP D 330 THR D 346 1 17 HELIX 61 AG7 CYS D 350 LYS D 369 1 20 HELIX 62 AG8 THR D 373 ARG D 385 1 13 HELIX 63 AG9 CYS D 393 ALA D 399 1 7 HELIX 64 AH1 GLY D 400 PHE D 410 1 11 HELIX 65 AH2 PHE D 410 LYS D 419 1 10 SHEET 1 AA1 4 PHE A 120 VAL A 125 0 SHEET 2 AA1 4 TYR A 81 CYS A 86 1 N ILE A 83 O VAL A 123 SHEET 3 AA1 4 VAL A 136 VAL A 139 -1 O MET A 138 N ARG A 84 SHEET 4 AA1 4 ASP A 142 LYS A 145 -1 O TYR A 144 N PHE A 137 SHEET 1 AA2 6 TYR B 11 THR B 14 0 SHEET 2 AA2 6 GLY B 262 PRO B 267 1 O GLU B 265 N GLU B 13 SHEET 3 AA2 6 PRO B 249 GLY B 256 -1 N VAL B 254 O GLY B 262 SHEET 4 AA2 6 VAL B 322 THR B 326 1 O VAL B 322 N SER B 255 SHEET 5 AA2 6 VAL B 289 SER B 294 -1 N ALA B 291 O LEU B 325 SHEET 6 AA2 6 ASP B 298 SER B 301 -1 O PHE B 300 N VAL B 292 SHEET 1 AA3 4 GLU B 170 ARG B 175 0 SHEET 2 AA3 4 ALA B 127 ILE B 134 1 N ILE B 132 O ALA B 174 SHEET 3 AA3 4 ARG B 87 ALA B 93 1 N CYS B 91 O TYR B 131 SHEET 4 AA3 4 THR B 216 ASN B 220 1 O VAL B 217 N ILE B 90 SHEET 1 AA4 4 PHE C 120 VAL C 125 0 SHEET 2 AA4 4 TYR C 81 CYS C 86 1 N ILE C 83 O LYS C 121 SHEET 3 AA4 4 VAL C 136 VAL C 139 -1 O MET C 138 N ARG C 84 SHEET 4 AA4 4 ASP C 142 LYS C 145 -1 O TYR C 144 N PHE C 137 SHEET 1 AA5 6 ALA D 12 THR D 14 0 SHEET 2 AA5 6 GLY D 262 LEU D 266 1 O GLU D 265 N GLU D 13 SHEET 3 AA5 6 LYS D 250 GLY D 256 -1 N VAL D 254 O GLY D 262 SHEET 4 AA5 6 VAL D 322 THR D 326 1 O VAL D 322 N SER D 255 SHEET 5 AA5 6 VAL D 289 SER D 294 -1 N LYS D 290 O LEU D 325 SHEET 6 AA5 6 ASP D 298 SER D 301 -1 O PHE D 300 N VAL D 292 SHEET 1 AA6 4 GLU D 170 ARG D 175 0 SHEET 2 AA6 4 ALA D 127 ILE D 134 1 N ILE D 132 O ALA D 174 SHEET 3 AA6 4 ARG D 87 ALA D 93 1 N CYS D 91 O TYR D 131 SHEET 4 AA6 4 THR D 216 ASN D 220 1 O ASN D 219 N ASN D 92 LINK SG CYS A 86 FE1 FES A 201 1555 1555 2.32 LINK SG CYS A 91 FE1 FES A 201 1555 1555 2.34 LINK SG CYS A 127 FE2 FES A 201 1555 1555 2.38 LINK SG CYS A 131 FE2 FES A 201 1555 1555 2.32 LINK O HOH A 396 NA NA B 510 1555 1555 2.64 LINK OE2 GLU B 52 NA NA B 507 1555 1555 2.40 LINK OD1 ASP B 94 NA NA B 509 1555 1555 2.45 LINK OE1 GLU B 97 NA NA B 506 1555 1555 2.49 LINK OE1 GLU B 150 NA NA B 508 1555 1555 2.07 LINK O GLY B 178 NA NA B 510 1555 1555 2.49 LINK O ALA B 179 NA NA B 509 1555 1555 2.83 LINK OE2 GLU B 345 NA NA B 510 1555 1555 2.73 LINK SG CYS B 347 FE1 SF4 B 501 1555 1555 2.26 LINK SG CYS B 350 FE4 SF4 B 501 1555 1555 2.25 LINK SG CYS B 353 FE2 SF4 B 501 1555 1555 2.31 LINK SG CYS B 393 FE3 SF4 B 501 1555 1555 2.28 LINK O2D A3D B 503 NA NA B 506 1555 1555 2.57 LINK NA NA B 506 O HOH B 841 1555 1555 2.86 LINK NA NA B 507 O HOH B 736 1555 1555 2.55 LINK NA NA B 509 O HOH B 715 1555 1555 2.70 LINK NA NA B 509 O HOH B 766 1555 1555 2.73 LINK NA NA B 510 O HOH B 894 1555 1555 2.82 LINK SG CYS C 86 FE1 FES C 201 1555 1555 2.34 LINK OG SER C 88 NA NA C 204 1555 1555 2.92 LINK SG CYS C 91 FE1 FES C 201 1555 1555 2.34 LINK OE1 GLN C 126 NA NA C 204 1555 1555 2.46 LINK SG CYS C 127 FE2 FES C 201 1555 1555 2.37 LINK SG CYS C 131 FE2 FES C 201 1555 1555 2.35 LINK NA NA C 204 O HOH D 699 1555 1555 2.92 LINK NA NA C 204 O HOH D 785 1555 1555 2.78 LINK OE1 GLU D 97 K K D 509 1555 1555 2.67 LINK OE1 GLU D 108 NA NA D 507 1555 1555 2.35 LINK OE1 GLU D 170 NA NA D 508 1555 1555 3.05 LINK OE2 GLU D 170 NA NA D 508 1555 1555 2.18 LINK SG CYS D 347 FE1 SF4 D 501 1555 1555 2.30 LINK SG CYS D 350 FE4 SF4 D 501 1555 1555 2.25 LINK SG CYS D 353 FE2 SF4 D 501 1555 1555 2.25 LINK SG CYS D 393 FE3 SF4 D 501 1555 1555 2.28 LINK O2D A3D D 503 K K D 509 1555 1555 2.71 LINK NA NA D 507 O HOH D 639 1555 1555 2.58 LINK NA NA D 507 O HOH D 824 1555 1555 2.73 LINK NA NA D 508 O HOH D 801 1555 1555 2.50 LINK K K D 509 O HOH D 839 1555 1555 2.77 CISPEP 1 ALA A 134 PRO A 135 0 -3.87 CISPEP 2 GLY B 85 PRO B 86 0 -0.33 CISPEP 3 LYS B 202 PRO B 203 0 -4.58 CISPEP 4 PRO B 203 PRO B 204 0 2.45 CISPEP 5 ALA C 134 PRO C 135 0 -2.71 CISPEP 6 GLY D 85 PRO D 86 0 2.13 CISPEP 7 LYS D 202 PRO D 203 0 -8.58 CISPEP 8 PRO D 203 PRO D 204 0 3.47 CRYST1 63.527 116.619 190.010 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015741 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008575 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005263 0.00000