HEADER BIOSYNTHETIC PROTEIN 07-SEP-23 8QHE TITLE CRYSTAL STRUCTURE IR-09 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 6-PHOSPHOGLUCONATE DEHYDROGENASE NADP-BINDING DOMAIN- COMPND 3 CONTAINING PROTEIN; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS LENTULUS; SOURCE 3 ORGANISM_TAXID: 293939; SOURCE 4 GENE: ALT_005006; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS REDUCTASE, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.W.LEVY REVDAT 2 25-OCT-23 8QHE 1 JRNL REVDAT 1 11-OCT-23 8QHE 0 JRNL AUTH A.R.CASAMAJO,Y.YU,C.SCHNEPEL,C.MORRILL,R.BARKER,C.W.LEVY, JRNL AUTH 2 J.FINNIGAN,V.SPELLING,K.WESTERLUND,M.PETCHEY,R.J.SHEPPARD, JRNL AUTH 3 R.J.LEWIS,F.FALCIONI,M.A.HAYES,N.J.TURNER JRNL TITL BIOCATALYSIS IN DRUG DESIGN: ENGINEERED REDUCTIVE AMINASES JRNL TITL 2 (REDAMS) ARE USED TO ACCESS CHIRAL BUILDING BLOCKS WITH JRNL TITL 3 MULTIPLE STEREOCENTERS. JRNL REF J.AM.CHEM.SOC. V. 145 22041 2023 JRNL REFN ESSN 1520-5126 JRNL PMID 37782882 JRNL DOI 10.1021/JACS.3C07010 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 39435 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 2019 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 3.8500 - 3.0600 1.00 2725 143 0.1659 0.2167 REMARK 3 2 3.0600 - 2.6700 1.00 2725 144 0.1927 0.2118 REMARK 3 3 2.6700 - 2.4300 1.00 2667 146 0.1797 0.2097 REMARK 3 4 2.4300 - 2.2500 1.00 2698 131 0.1979 0.2661 REMARK 3 5 2.2500 - 2.1200 1.00 2669 147 0.1991 0.2105 REMARK 3 6 2.1200 - 2.0200 1.00 2662 133 0.2023 0.2226 REMARK 3 7 2.0100 - 1.9300 1.00 2656 144 0.2165 0.2905 REMARK 3 8 1.9300 - 1.8500 1.00 2640 141 0.2582 0.2853 REMARK 3 9 1.8500 - 1.7900 1.00 2626 161 0.2542 0.3017 REMARK 3 10 1.7900 - 1.7300 1.00 2589 145 0.2455 0.3114 REMARK 3 11 1.7300 - 1.6800 1.00 2654 152 0.2523 0.2962 REMARK 3 12 1.6800 - 1.6400 0.99 2624 142 0.2753 0.2808 REMARK 3 13 1.6400 - 1.6000 0.98 2590 135 0.3074 0.3332 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.202 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.948 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.34 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.020 2236 REMARK 3 ANGLE : 1.692 3046 REMARK 3 CHIRALITY : 0.093 358 REMARK 3 PLANARITY : 0.012 383 REMARK 3 DIHEDRAL : 15.550 327 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): 93.0933 -28.0598 49.9244 REMARK 3 T TENSOR REMARK 3 T11: 0.4048 T22: 0.3564 REMARK 3 T33: 0.3266 T12: 0.0047 REMARK 3 T13: -0.0095 T23: -0.0790 REMARK 3 L TENSOR REMARK 3 L11: 0.3323 L22: 0.1522 REMARK 3 L33: 0.1725 L12: -0.0470 REMARK 3 L13: 0.1007 L23: 0.0508 REMARK 3 S TENSOR REMARK 3 S11: 0.1751 S12: -0.2153 S13: 0.0348 REMARK 3 S21: 0.4267 S22: 0.1471 S23: -0.1048 REMARK 3 S31: -0.1026 S32: 0.4616 S33: 0.0004 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 43 ) REMARK 3 ORIGIN FOR THE GROUP (A): 99.4503 -29.5255 46.4781 REMARK 3 T TENSOR REMARK 3 T11: 0.3823 T22: 0.4499 REMARK 3 T33: 0.3193 T12: 0.0450 REMARK 3 T13: -0.0812 T23: -0.1199 REMARK 3 L TENSOR REMARK 3 L11: 0.5206 L22: 0.5566 REMARK 3 L33: 0.1742 L12: -0.4771 REMARK 3 L13: 0.1842 L23: -0.1675 REMARK 3 S TENSOR REMARK 3 S11: 0.1750 S12: -0.0999 S13: 0.1286 REMARK 3 S21: 0.2936 S22: 0.1860 S23: -0.1246 REMARK 3 S31: 0.1050 S32: 0.5577 S33: 0.0006 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 44 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): 83.0075 -29.5343 42.9406 REMARK 3 T TENSOR REMARK 3 T11: 0.3071 T22: 0.2346 REMARK 3 T33: 0.4187 T12: -0.0367 REMARK 3 T13: 0.0133 T23: -0.0309 REMARK 3 L TENSOR REMARK 3 L11: 2.4526 L22: 1.9424 REMARK 3 L33: 2.5174 L12: -0.8704 REMARK 3 L13: 0.0753 L23: -0.1793 REMARK 3 S TENSOR REMARK 3 S11: 0.2009 S12: -0.0156 S13: -0.4557 REMARK 3 S21: 0.1614 S22: 0.0664 S23: 0.4635 REMARK 3 S31: 0.1768 S32: -0.0554 S33: 0.0175 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 162 THROUGH 193 ) REMARK 3 ORIGIN FOR THE GROUP (A): 84.1502 -1.3928 39.2217 REMARK 3 T TENSOR REMARK 3 T11: 0.2760 T22: 0.2616 REMARK 3 T33: 0.2749 T12: -0.0070 REMARK 3 T13: 0.0251 T23: 0.0218 REMARK 3 L TENSOR REMARK 3 L11: 0.5058 L22: 0.2695 REMARK 3 L33: 0.5058 L12: -0.3032 REMARK 3 L13: 0.3407 L23: -0.0398 REMARK 3 S TENSOR REMARK 3 S11: -0.1261 S12: -0.0858 S13: 0.0452 REMARK 3 S21: -0.1459 S22: -0.2007 S23: 0.0541 REMARK 3 S31: 0.0109 S32: 0.2040 S33: -0.0016 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 194 THROUGH 221 ) REMARK 3 ORIGIN FOR THE GROUP (A): 75.0837 3.9206 46.9233 REMARK 3 T TENSOR REMARK 3 T11: 0.2414 T22: 0.6544 REMARK 3 T33: 0.2465 T12: -0.1016 REMARK 3 T13: -0.0161 T23: -0.1567 REMARK 3 L TENSOR REMARK 3 L11: 2.0328 L22: 3.3367 REMARK 3 L33: 1.9158 L12: 0.6072 REMARK 3 L13: 0.5870 L23: 0.2641 REMARK 3 S TENSOR REMARK 3 S11: 0.0409 S12: -0.2956 S13: 0.3754 REMARK 3 S21: 0.3683 S22: -0.6968 S23: 0.5511 REMARK 3 S31: -0.3382 S32: -0.5506 S33: -1.8557 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 222 THROUGH 248 ) REMARK 3 ORIGIN FOR THE GROUP (A): 71.3634 11.5114 34.4519 REMARK 3 T TENSOR REMARK 3 T11: 0.3112 T22: 0.3393 REMARK 3 T33: 0.3790 T12: -0.0166 REMARK 3 T13: -0.0748 T23: 0.0216 REMARK 3 L TENSOR REMARK 3 L11: 0.1494 L22: 1.1179 REMARK 3 L33: 0.4232 L12: -0.2063 REMARK 3 L13: -0.0814 L23: 0.6799 REMARK 3 S TENSOR REMARK 3 S11: 0.4291 S12: -0.2545 S13: -0.3139 REMARK 3 S21: 0.1170 S22: -0.4652 S23: 0.4631 REMARK 3 S31: -0.1951 S32: -0.2447 S33: 0.0054 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 249 THROUGH 284 ) REMARK 3 ORIGIN FOR THE GROUP (A): 69.8874 3.7330 30.2273 REMARK 3 T TENSOR REMARK 3 T11: 0.3954 T22: 0.3690 REMARK 3 T33: 0.3786 T12: 0.0411 REMARK 3 T13: -0.1364 T23: -0.0563 REMARK 3 L TENSOR REMARK 3 L11: 0.1079 L22: 1.1312 REMARK 3 L33: 0.9554 L12: 0.3401 REMARK 3 L13: 0.1628 L23: 0.2036 REMARK 3 S TENSOR REMARK 3 S11: -0.2104 S12: -0.1176 S13: 0.5678 REMARK 3 S21: -0.5886 S22: -0.0889 S23: 0.5992 REMARK 3 S31: -0.2464 S32: -0.3585 S33: -0.0877 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8QHE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-SEP-23. REMARK 100 THE DEPOSITION ID IS D_1292133271. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAY-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.969 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39488 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 36.890 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 12.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.2400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 11.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.160 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM CHLORIDE HEXAHYDRATE REMARK 280 0.1 M TRIS 8.5 20 % W/V PEG 8000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 39.62750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.55200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.62750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 50.55200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -108.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 158.51000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 THR A 285 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 SER A 2 N CA C O CB OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD1 HIS A 270 OD1 ASP A 273 1.59 REMARK 500 OH TYR A 224 O HOH A 401 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 208 CB - CG - SD ANGL. DEV. = 23.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 303 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 433 O REMARK 620 2 HOH A 474 O 89.3 REMARK 620 3 HOH A 497 O 152.1 79.8 REMARK 620 4 HOH A 499 O 99.8 95.0 106.7 REMARK 620 5 HOH A 539 O 91.3 178.8 99.2 85.9 REMARK 620 N 1 2 3 4 DBREF1 8QHE A 1 285 UNP A0A0S7DXU4_9EURO DBREF2 8QHE A A0A0S7DXU4 1 285 SEQADV 8QHE MET A -19 UNP A0A0S7DXU INITIATING METHIONINE SEQADV 8QHE GLY A -18 UNP A0A0S7DXU EXPRESSION TAG SEQADV 8QHE SER A -17 UNP A0A0S7DXU EXPRESSION TAG SEQADV 8QHE SER A -16 UNP A0A0S7DXU EXPRESSION TAG SEQADV 8QHE HIS A -15 UNP A0A0S7DXU EXPRESSION TAG SEQADV 8QHE HIS A -14 UNP A0A0S7DXU EXPRESSION TAG SEQADV 8QHE HIS A -13 UNP A0A0S7DXU EXPRESSION TAG SEQADV 8QHE HIS A -12 UNP A0A0S7DXU EXPRESSION TAG SEQADV 8QHE HIS A -11 UNP A0A0S7DXU EXPRESSION TAG SEQADV 8QHE HIS A -10 UNP A0A0S7DXU EXPRESSION TAG SEQADV 8QHE SER A -9 UNP A0A0S7DXU EXPRESSION TAG SEQADV 8QHE SER A -8 UNP A0A0S7DXU EXPRESSION TAG SEQADV 8QHE GLY A -7 UNP A0A0S7DXU EXPRESSION TAG SEQADV 8QHE LEU A -6 UNP A0A0S7DXU EXPRESSION TAG SEQADV 8QHE VAL A -5 UNP A0A0S7DXU EXPRESSION TAG SEQADV 8QHE PRO A -4 UNP A0A0S7DXU EXPRESSION TAG SEQADV 8QHE ARG A -3 UNP A0A0S7DXU EXPRESSION TAG SEQADV 8QHE GLY A -2 UNP A0A0S7DXU EXPRESSION TAG SEQADV 8QHE SER A -1 UNP A0A0S7DXU EXPRESSION TAG SEQADV 8QHE HIS A 0 UNP A0A0S7DXU EXPRESSION TAG SEQRES 1 A 305 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 305 LEU VAL PRO ARG GLY SER HIS MET SER SER VAL SER ILE SEQRES 3 A 305 PHE GLY LEU GLY ALA MET GLY THR ALA LEU ALA SER ARG SEQRES 4 A 305 PHE LEU GLU GLU LYS TYR LYS VAL ALA VAL TRP ASN ARG SEQRES 5 A 305 SER PRO GLU LYS ALA SER PRO LEU LEU GLU LYS GLY ALA SEQRES 6 A 305 THR LEU SER HIS THR ALA LEU ASP GLY ILE ASN ALA SER SEQRES 7 A 305 ASP LEU ILE VAL ILE CYS LEU LEU ASP ASN ALA ALA VAL SEQRES 8 A 305 GLN ALA THR LEU ASN SER ALA LEU GLU HIS LEU ARG GLY SEQRES 9 A 305 LYS THR ILE ILE ASN LEU THR ASN GLY THR PRO ASP GLN SEQRES 10 A 305 ALA ARG LYS LEU SER ASP LEU ILE VAL SER HIS GLY ALA SEQRES 11 A 305 GLN TYR VAL HIS GLY GLY ILE MET ALA THR PRO SER MET SEQRES 12 A 305 ILE GLY SER PRO HIS ALA LEU VAL LEU TYR SER GLY SER SEQRES 13 A 305 PRO ASP ALA PHE LYS THR ALA GLU ALA ASP LEU SER VAL SEQRES 14 A 305 LEU ALA LYS CYS ILE PHE LEU GLY GLU ASP ALA GLY SER SEQRES 15 A 305 ALA SER LEU HIS ASP LEU ALA LEU LEU SER GLY MET TYR SEQRES 16 A 305 GLY LEU PHE SER GLY PHE LEU HIS ALA THR ALA LEU VAL SEQRES 17 A 305 ARG SER SER THR PRO ALA VAL LYS PHE VAL ASP LEU LEU SEQRES 18 A 305 VAL PRO TRP LEU GLY ALA MET THR GLU TYR THR LYS GLY SEQRES 19 A 305 MET ALA LYS GLN ILE ASP GLU GLY ASN TYR ALA SER GLU SEQRES 20 A 305 GLY SER ASN LEU GLY MET GLN LEU VAL ALA ILE GLN ASN SEQRES 21 A 305 ILE ILE ASP ALA SER ALA ALA GLN GLN VAL SER ALA ASP SEQRES 22 A 305 PHE ILE ARG PRO MET LYS GLU PHE MET GLU LYS ALA VAL SEQRES 23 A 305 VAL ALA GLY HIS GLY GLY ASP ASP ILE SER SER LEU ILE SEQRES 24 A 305 ASP PHE VAL LYS SER THR HET NDP A 301 74 HET VCU A 302 23 HET MG A 303 1 HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE HETNAM VCU ~{N}-METHYLCYCLOHEXANAMINE HETNAM MG MAGNESIUM ION FORMUL 2 NDP C21 H30 N7 O17 P3 FORMUL 3 VCU C7 H15 N FORMUL 4 MG MG 2+ FORMUL 5 HOH *159(H2 O) HELIX 1 AA1 GLY A 10 GLU A 23 1 14 HELIX 2 AA2 SER A 33 LYS A 36 5 4 HELIX 3 AA3 ALA A 37 LYS A 43 1 7 HELIX 4 AA4 THR A 50 ALA A 57 1 8 HELIX 5 AA5 ASP A 67 SER A 77 1 11 HELIX 6 AA6 ALA A 78 LEU A 82 5 5 HELIX 7 AA7 THR A 94 HIS A 108 1 15 HELIX 8 AA8 THR A 120 ILE A 124 5 5 HELIX 9 AA9 SER A 136 SER A 148 1 13 HELIX 10 AB1 GLY A 161 ARG A 189 1 29 HELIX 11 AB2 PRO A 193 GLY A 222 1 30 HELIX 12 AB3 ASN A 230 GLN A 248 1 19 HELIX 13 AB4 ALA A 252 PHE A 254 5 3 HELIX 14 AB5 ILE A 255 ALA A 268 1 14 HELIX 15 AB6 ASP A 274 VAL A 282 5 9 SHEET 1 AA1 8 THR A 46 LEU A 47 0 SHEET 2 AA1 8 LYS A 26 TRP A 30 1 N VAL A 27 O THR A 46 SHEET 3 AA1 8 SER A 3 PHE A 7 1 N ILE A 6 O ALA A 28 SHEET 4 AA1 8 LEU A 60 ILE A 63 1 O VAL A 62 N SER A 5 SHEET 5 AA1 8 THR A 86 ASN A 89 1 O ILE A 88 N ILE A 61 SHEET 6 AA1 8 GLN A 111 MET A 118 1 O GLN A 111 N ILE A 87 SHEET 7 AA1 8 LEU A 130 GLY A 135 -1 O SER A 134 N HIS A 114 SHEET 8 AA1 8 LYS A 152 PHE A 155 1 O ILE A 154 N TYR A 133 LINK MG MG A 303 O HOH A 433 1555 1555 2.05 LINK MG MG A 303 O HOH A 474 1555 1555 2.09 LINK MG MG A 303 O HOH A 497 1555 1554 1.97 LINK MG MG A 303 O HOH A 499 1555 1555 2.09 LINK MG MG A 303 O HOH A 539 1555 1554 2.27 CRYST1 79.255 101.104 36.388 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012618 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009891 0.000000 0.00000 SCALE3 0.000000 0.000000 0.027482 0.00000