HEADER LIPID BINDING PROTEIN 11-SEP-23 8QHY TITLE 300A VIPP1 H1-6 HELICAL TUBES IN THE PRESENCE OF EPL COMPND MOL_ID: 1; COMPND 2 MOLECULE: MEMBRANE-ASSOCIATED PROTEIN VIPP1; COMPND 3 CHAIN: D; COMPND 4 SYNONYM: VESICLE-INDUCING PROTEIN IN PLASTIDS 1,VIPP1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNECHOCYSTIS SP. PCC 6803; SOURCE 3 ORGANISM_TAXID: 1148; SOURCE 4 GENE: VIPP1, SLL0617; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: C41 KEYWDS MEMBRANE REMODELING, MEMBRANE TUBULATION, LIPID BINDING PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR B.JUNGLAS,C.SACHSE REVDAT 3 23-OCT-24 8QHY 1 JRNL REVDAT 2 16-OCT-24 8QHY 1 JRNL REVDAT 1 18-SEP-24 8QHY 0 JRNL AUTH B.JUNGLAS,D.KARTTE,M.KUTZNER,N.HELLMANN,I.RITTER, JRNL AUTH 2 D.SCHNEIDER,C.SACHSE JRNL TITL STRUCTURAL BASIS FOR VIPP1 MEMBRANE BINDING: FROM LOOSE JRNL TITL 2 COATS AND CARPETS TO RING AND ROD ASSEMBLIES. JRNL REF NAT.STRUCT.MOL.BIOL. 2024 JRNL REFN ESSN 1545-9985 JRNL PMID 39379528 JRNL DOI 10.1038/S41594-024-01399-Z REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH B.JUNGLAS,D.KARTTE,M.KUTZNER,N.HELLMANN,I.RITTER, REMARK 1 AUTH 2 D.SCHNEIDER,C.SACHSE REMARK 1 TITL STRUCTURAL BASIS FOR VIPP1 MEMBRANE BINDING: FROM LOOSE REMARK 1 TITL 2 COATS AND CARPETS TO RING AND ROD ASSEMBLIES REMARK 1 REF BIORXIV 2024 REMARK 1 REFN ISSN 2692-8205 REMARK 1 DOI 10.1101/2024.07.08.602470 REMARK 2 REMARK 2 RESOLUTION. 7.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 7.000 REMARK 3 NUMBER OF PARTICLES : 41036 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8QHY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-SEP-23. REMARK 100 THE DEPOSITION ID IS D_1292133286. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : HELICAL REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : HELICAL ARRAY REMARK 245 PARTICLE TYPE : HELICAL REMARK 245 NAME OF SAMPLE : VIPP1 H1-6 WITH EPL REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON IV (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4800.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: 60-MERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: 60-MERIC REMARK 350 SOFTWARE USED: UCSF CHIMERA 1.15_B42258. REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.935444 0.353475 0.000000 -121.34549 REMARK 350 BIOMT2 2 -0.353475 0.935444 0.000000 175.57287 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -36.79194 REMARK 350 BIOMT1 3 -0.146083 0.989272 0.000000 65.86085 REMARK 350 BIOMT2 3 -0.989272 -0.146083 0.000000 896.84909 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 -32.70385 REMARK 350 BIOMT1 4 -0.997684 0.068016 0.000000 810.46038 REMARK 350 BIOMT2 4 -0.068016 -0.997684 -0.000001 867.59465 REMARK 350 BIOMT3 4 0.000000 -0.000001 1.000000 -28.61540 REMARK 350 BIOMT1 5 -0.278991 -0.960294 0.000000 940.49968 REMARK 350 BIOMT2 5 0.960294 -0.278991 0.000000 133.85322 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 -24.52776 REMARK 350 BIOMT1 6 0.878817 -0.477158 0.000000 251.30337 REMARK 350 BIOMT2 6 0.477158 0.878817 -0.000001 -149.50927 REMARK 350 BIOMT3 6 0.000000 0.000001 1.000000 -20.44032 REMARK 350 BIOMT1 7 0.653420 0.756995 0.000001 -172.37448 REMARK 350 BIOMT2 7 -0.756995 0.653420 0.000000 463.50134 REMARK 350 BIOMT3 7 0.000000 -0.000001 1.000000 -16.35164 REMARK 350 BIOMT1 8 -0.600421 0.799684 0.000001 336.30859 REMARK 350 BIOMT2 8 -0.799684 -0.600421 -0.000001 1008.04389 REMARK 350 BIOMT3 8 0.000000 -0.000001 1.000000 -12.26341 REMARK 350 BIOMT1 9 -0.909236 -0.416281 0.000000 976.71707 REMARK 350 BIOMT2 9 0.416281 -0.909236 0.000000 627.04105 REMARK 350 BIOMT3 9 0.000000 0.000000 1.000000 -8.17585 REMARK 350 BIOMT1 10 0.213030 -0.977046 -0.000001 740.88681 REMARK 350 BIOMT2 10 0.977046 0.213030 0.000000 -79.83187 REMARK 350 BIOMT3 10 0.000000 -0.000001 1.000000 -4.08761 REMARK 350 BIOMT1 11 0.213031 0.977046 0.000001 -79.83226 REMARK 350 BIOMT2 11 -0.977046 0.213031 0.000000 740.88604 REMARK 350 BIOMT3 11 0.000000 -0.000001 1.000000 4.08838 REMARK 350 BIOMT1 12 -0.963163 0.268920 0.000000 711.58158 REMARK 350 BIOMT2 12 -0.268920 -0.963163 -0.000001 937.47485 REMARK 350 BIOMT3 12 0.000000 -0.000001 1.000000 -114.46358 REMARK 350 BIOMT1 13 -0.467929 -0.883766 -0.000001 987.71214 REMARK 350 BIOMT2 13 0.883766 -0.467929 0.000000 245.34869 REMARK 350 BIOMT3 13 0.000000 -0.000001 1.000000 -110.37558 REMARK 350 BIOMT1 14 0.763796 -0.645458 -0.000001 370.29887 REMARK 350 BIOMT2 14 0.645458 0.763796 0.000001 -171.88702 REMARK 350 BIOMT3 14 0.000000 -0.000002 1.000000 -106.28709 REMARK 350 BIOMT1 15 0.793353 0.608762 0.000000 -168.88807 REMARK 350 BIOMT2 15 -0.608762 0.793353 0.000000 342.47175 REMARK 350 BIOMT3 15 0.000000 0.000000 1.000000 -102.19994 REMARK 350 BIOMT1 16 -0.425779 0.904827 0.000001 218.79971 REMARK 350 BIOMT2 16 -0.904827 -0.425779 0.000000 978.85469 REMARK 350 BIOMT3 16 0.000000 -0.000001 1.000000 -98.11152 REMARK 350 BIOMT1 17 -0.974761 -0.223250 0.000000 923.16469 REMARK 350 BIOMT2 17 0.223250 -0.974761 -0.000001 735.63473 REMARK 350 BIOMT3 17 0.000000 -0.000001 1.000000 -94.02363 REMARK 350 BIOMT1 18 0.010471 -0.999945 -0.000002 835.57988 REMARK 350 BIOMT2 18 0.999945 0.010471 0.000000 -4.37480 REMARK 350 BIOMT3 18 0.000000 -0.000002 1.000000 -89.93510 REMARK 350 BIOMT1 19 0.979223 -0.202788 0.000000 93.89761 REMARK 350 BIOMT2 19 0.202788 0.979223 -0.000001 -76.44379 REMARK 350 BIOMT3 19 0.000000 0.000001 1.000000 -85.84853 REMARK 350 BIOMT1 20 0.406737 0.913545 0.000002 -134.51906 REMARK 350 BIOMT2 20 -0.913545 0.406737 0.000001 632.85890 REMARK 350 BIOMT3 20 0.000000 -0.000002 1.000000 -81.75898 REMARK 350 BIOMT1 21 -0.805928 0.592014 0.000001 509.84350 REMARK 350 BIOMT2 21 -0.592014 -0.805928 -0.000001 1007.13565 REMARK 350 BIOMT3 21 0.000000 -0.000001 1.000000 -77.67150 REMARK 350 BIOMT1 22 -0.750111 -0.661312 -0.000002 1012.79856 REMARK 350 BIOMT2 22 0.661312 -0.750111 -0.000003 457.29681 REMARK 350 BIOMT3 22 0.000000 -0.000003 1.000000 -73.58224 REMARK 350 BIOMT1 23 0.486336 -0.873772 -0.000001 582.72337 REMARK 350 BIOMT2 23 0.873772 0.486336 0.000001 -151.24524 REMARK 350 BIOMT3 23 0.000000 -0.000001 1.000000 -69.49540 REMARK 350 BIOMT1 24 0.957320 0.289032 0.000000 -103.46756 REMARK 350 BIOMT2 24 -0.289032 0.957320 0.000002 139.31835 REMARK 350 BIOMT3 24 0.000000 -0.000002 1.000000 -65.40709 REMARK 350 BIOMT1 25 -0.078459 0.996917 0.000001 34.24761 REMARK 350 BIOMT2 25 -0.996917 -0.078459 0.000000 871.65793 REMARK 350 BIOMT3 25 0.000000 -0.000001 1.000000 -61.31971 REMARK 350 BIOMT1 26 -0.990748 0.135715 0.000000 779.11365 REMARK 350 BIOMT2 26 -0.135715 -0.990748 0.000001 893.11398 REMARK 350 BIOMT3 26 0.000000 0.000001 1.000000 -57.23242 REMARK 350 BIOMT1 27 -0.343660 -0.939094 0.000000 958.75639 REMARK 350 BIOMT2 27 0.939094 -0.343660 0.000000 169.91778 REMARK 350 BIOMT3 27 0.000000 0.000000 1.000000 -53.14393 REMARK 350 BIOMT1 28 0.844328 -0.535827 0.000000 290.43049 REMARK 350 BIOMT2 28 0.535827 0.844328 0.000000 -159.66500 REMARK 350 BIOMT3 28 0.000000 -0.000001 1.000000 -49.05569 REMARK 350 BIOMT1 29 0.703395 0.710800 0.000000 -173.96122 REMARK 350 BIOMT2 29 -0.710800 0.703395 0.000000 423.10998 REMARK 350 BIOMT3 29 0.000000 0.000000 1.000000 -44.96782 REMARK 350 BIOMT1 30 -0.544639 0.838671 0.000000 296.50635 REMARK 350 BIOMT2 30 -0.838671 -0.544639 0.000000 1000.98987 REMARK 350 BIOMT3 30 0.000000 0.000000 1.000000 -40.87982 REMARK 350 BIOMT1 31 -0.935444 -0.353475 0.000000 961.34549 REMARK 350 BIOMT2 31 0.353475 -0.935444 0.000000 664.42713 REMARK 350 BIOMT3 31 0.000000 0.000000 1.000000 -36.79194 REMARK 350 BIOMT1 32 0.146083 -0.989272 0.000000 774.13915 REMARK 350 BIOMT2 32 0.989272 0.146083 0.000000 -56.84909 REMARK 350 BIOMT3 32 0.000000 0.000000 1.000000 -32.70385 REMARK 350 BIOMT1 33 0.997684 -0.068016 0.000000 29.53962 REMARK 350 BIOMT2 33 0.068016 0.997684 0.000001 -27.59465 REMARK 350 BIOMT3 33 0.000000 -0.000001 1.000000 -28.61540 REMARK 350 BIOMT1 34 0.278991 0.960294 0.000000 -100.49968 REMARK 350 BIOMT2 34 -0.960294 0.278991 0.000000 706.14678 REMARK 350 BIOMT3 34 0.000000 0.000000 1.000000 -24.52776 REMARK 350 BIOMT1 35 -0.878817 0.477158 0.000000 588.69663 REMARK 350 BIOMT2 35 -0.477158 -0.878817 0.000001 989.50927 REMARK 350 BIOMT3 35 0.000000 0.000001 1.000000 -20.44032 REMARK 350 BIOMT1 36 -0.653420 -0.756995 -0.000001 1012.37448 REMARK 350 BIOMT2 36 0.756995 -0.653420 0.000000 376.49866 REMARK 350 BIOMT3 36 0.000000 -0.000001 1.000000 -16.35164 REMARK 350 BIOMT1 37 0.600421 -0.799684 -0.000001 503.69141 REMARK 350 BIOMT2 37 0.799684 0.600421 0.000001 -168.04389 REMARK 350 BIOMT3 37 0.000000 -0.000001 1.000000 -12.26341 REMARK 350 BIOMT1 38 0.909236 0.416281 0.000000 -136.71707 REMARK 350 BIOMT2 38 -0.416281 0.909236 0.000000 212.95895 REMARK 350 BIOMT3 38 0.000000 0.000000 1.000000 -8.17585 REMARK 350 BIOMT1 39 -0.213030 0.977046 0.000001 99.11319 REMARK 350 BIOMT2 39 -0.977046 -0.213030 0.000000 919.83187 REMARK 350 BIOMT3 39 0.000000 -0.000001 1.000000 -4.08761 REMARK 350 BIOMT1 40 -1.000000 0.000000 0.000000 840.00000 REMARK 350 BIOMT2 40 0.000000 -1.000000 0.000000 840.00000 REMARK 350 BIOMT3 40 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 41 -0.213031 -0.977046 -0.000001 919.83226 REMARK 350 BIOMT2 41 0.977046 -0.213031 0.000000 99.11396 REMARK 350 BIOMT3 41 0.000000 -0.000001 1.000000 4.08838 REMARK 350 BIOMT1 42 0.963163 -0.268920 0.000000 128.41842 REMARK 350 BIOMT2 42 0.268920 0.963163 0.000001 -97.47485 REMARK 350 BIOMT3 42 0.000000 -0.000001 1.000000 -114.46358 REMARK 350 BIOMT1 43 0.467929 0.883766 0.000001 -147.71214 REMARK 350 BIOMT2 43 -0.883766 0.467929 0.000000 594.65131 REMARK 350 BIOMT3 43 0.000000 -0.000001 1.000000 -110.37558 REMARK 350 BIOMT1 44 -0.763796 0.645458 0.000001 469.70113 REMARK 350 BIOMT2 44 -0.645458 -0.763796 -0.000001 1011.88702 REMARK 350 BIOMT3 44 0.000000 -0.000002 1.000000 -106.28709 REMARK 350 BIOMT1 45 -0.793353 -0.608762 0.000000 1008.88807 REMARK 350 BIOMT2 45 0.608762 -0.793353 0.000000 497.52825 REMARK 350 BIOMT3 45 0.000000 0.000000 1.000000 -102.19994 REMARK 350 BIOMT1 46 0.425779 -0.904827 -0.000001 621.20029 REMARK 350 BIOMT2 46 0.904827 0.425779 0.000000 -138.85469 REMARK 350 BIOMT3 46 0.000000 -0.000001 1.000000 -98.11152 REMARK 350 BIOMT1 47 0.974761 0.223250 0.000000 -83.16469 REMARK 350 BIOMT2 47 -0.223250 0.974761 0.000001 104.36527 REMARK 350 BIOMT3 47 0.000000 -0.000001 1.000000 -94.02363 REMARK 350 BIOMT1 48 -0.010471 0.999945 0.000002 4.42012 REMARK 350 BIOMT2 48 -0.999945 -0.010471 0.000000 844.37480 REMARK 350 BIOMT3 48 0.000000 -0.000002 1.000000 -89.93510 REMARK 350 BIOMT1 49 -0.979223 0.202788 0.000000 746.10239 REMARK 350 BIOMT2 49 -0.202788 -0.979223 0.000001 916.44379 REMARK 350 BIOMT3 49 0.000000 0.000001 1.000000 -85.84853 REMARK 350 BIOMT1 50 -0.406737 -0.913545 -0.000002 974.51906 REMARK 350 BIOMT2 50 0.913545 -0.406737 -0.000001 207.14110 REMARK 350 BIOMT3 50 0.000000 -0.000002 1.000000 -81.75898 REMARK 350 BIOMT1 51 0.805928 -0.592014 -0.000001 330.15650 REMARK 350 BIOMT2 51 0.592014 0.805928 0.000001 -167.13565 REMARK 350 BIOMT3 51 0.000000 -0.000001 1.000000 -77.67150 REMARK 350 BIOMT1 52 0.750111 0.661312 0.000002 -172.79856 REMARK 350 BIOMT2 52 -0.661312 0.750111 0.000003 382.70319 REMARK 350 BIOMT3 52 0.000000 -0.000003 1.000000 -73.58224 REMARK 350 BIOMT1 53 -0.486336 0.873772 0.000001 257.27663 REMARK 350 BIOMT2 53 -0.873772 -0.486336 -0.000001 991.24524 REMARK 350 BIOMT3 53 0.000000 -0.000001 1.000000 -69.49540 REMARK 350 BIOMT1 54 -0.957320 -0.289032 0.000000 943.46756 REMARK 350 BIOMT2 54 0.289032 -0.957320 -0.000002 700.68165 REMARK 350 BIOMT3 54 0.000000 -0.000002 1.000000 -65.40709 REMARK 350 BIOMT1 55 0.078459 -0.996917 -0.000001 805.75239 REMARK 350 BIOMT2 55 0.996917 0.078459 0.000000 -31.65793 REMARK 350 BIOMT3 55 0.000000 -0.000001 1.000000 -61.31971 REMARK 350 BIOMT1 56 0.990748 -0.135715 0.000000 60.88635 REMARK 350 BIOMT2 56 0.135715 0.990748 -0.000001 -53.11398 REMARK 350 BIOMT3 56 0.000000 0.000001 1.000000 -57.23242 REMARK 350 BIOMT1 57 0.343660 0.939094 0.000000 -118.75639 REMARK 350 BIOMT2 57 -0.939094 0.343660 0.000000 670.08222 REMARK 350 BIOMT3 57 0.000000 0.000000 1.000000 -53.14393 REMARK 350 BIOMT1 58 -0.844328 0.535827 0.000000 549.56951 REMARK 350 BIOMT2 58 -0.535827 -0.844328 0.000000 999.66500 REMARK 350 BIOMT3 58 0.000000 -0.000001 1.000000 -49.05569 REMARK 350 BIOMT1 59 -0.703395 -0.710800 0.000000 1013.96122 REMARK 350 BIOMT2 59 0.710800 -0.703395 0.000000 416.89002 REMARK 350 BIOMT3 59 0.000000 0.000000 1.000000 -44.96782 REMARK 350 BIOMT1 60 0.544639 -0.838671 0.000000 543.49365 REMARK 350 BIOMT2 60 0.838671 0.544639 0.000000 -160.98987 REMARK 350 BIOMT3 60 0.000000 0.000000 1.000000 -40.87982 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP D 24 CB CG OD1 OD2 REMARK 470 PRO D 25 CB CG CD REMARK 470 GLU D 26 CB CG CD OE1 OE2 REMARK 470 LYS D 27 CB CG CD CE NZ REMARK 470 VAL D 28 CB CG1 CG2 REMARK 470 LEU D 29 CB CG CD1 CD2 REMARK 470 GLU D 30 CB CG CD OE1 OE2 REMARK 470 GLN D 31 CB CG CD OE1 NE2 REMARK 470 ALA D 32 CB REMARK 470 VAL D 33 CB CG1 CG2 REMARK 470 ILE D 34 CB CG1 CG2 CD1 REMARK 470 ASP D 35 CB CG OD1 OD2 REMARK 470 MET D 36 CB CG SD CE REMARK 470 GLN D 37 CB CG CD OE1 NE2 REMARK 470 GLU D 38 CB CG CD OE1 OE2 REMARK 470 ASP D 39 CB CG OD1 OD2 REMARK 470 LEU D 40 CB CG CD1 CD2 REMARK 470 VAL D 41 CB CG1 CG2 REMARK 470 GLN D 42 CB CG CD OE1 NE2 REMARK 470 LEU D 43 CB CG CD1 CD2 REMARK 470 ARG D 44 CB CG CD NE CZ NH1 NH2 REMARK 470 GLN D 45 CB CG CD OE1 NE2 REMARK 470 ALA D 46 CB REMARK 470 VAL D 47 CB CG1 CG2 REMARK 470 ALA D 48 CB REMARK 470 ARG D 49 CB CG CD NE CZ NH1 NH2 REMARK 470 THR D 50 CB OG1 CG2 REMARK 470 ILE D 51 CB CG1 CG2 CD1 REMARK 470 ALA D 52 CB REMARK 470 GLU D 53 CB CG CD OE1 OE2 REMARK 470 GLU D 54 CB CG CD OE1 OE2 REMARK 470 LYS D 55 CB CG CD CE NZ REMARK 470 ARG D 56 CB CG CD NE CZ NH1 NH2 REMARK 470 THR D 57 CB OG1 CG2 REMARK 470 GLU D 58 CB CG CD OE1 OE2 REMARK 470 GLN D 59 CB CG CD OE1 NE2 REMARK 470 ARG D 60 CB CG CD NE CZ NH1 NH2 REMARK 470 LEU D 61 CB CG CD1 CD2 REMARK 470 ASN D 62 CB CG OD1 ND2 REMARK 470 GLN D 63 CB CG CD OE1 NE2 REMARK 470 ASP D 64 CB CG OD1 OD2 REMARK 470 THR D 65 CB OG1 CG2 REMARK 470 GLN D 66 CB CG CD OE1 NE2 REMARK 470 GLU D 67 CB CG CD OE1 OE2 REMARK 470 ALA D 68 CB REMARK 470 LYS D 69 CB CG CD CE NZ REMARK 470 LYS D 70 CB CG CD CE NZ REMARK 470 TRP D 71 CB CG CD1 CD2 NE1 CE2 CE3 REMARK 470 TRP D 71 CZ2 CZ3 CH2 REMARK 470 GLU D 72 CB CG CD OE1 OE2 REMARK 470 ASP D 73 CB CG OD1 OD2 REMARK 470 ARG D 74 CB CG CD NE CZ NH1 NH2 REMARK 470 ALA D 75 CB REMARK 470 LYS D 76 CB CG CD CE NZ REMARK 470 LEU D 77 CB CG CD1 CD2 REMARK 470 ALA D 78 CB REMARK 470 LEU D 79 CB CG CD1 CD2 REMARK 470 THR D 80 CB OG1 CG2 REMARK 470 ASN D 81 CB CG OD1 ND2 REMARK 470 GLU D 83 CB CG CD OE1 OE2 REMARK 470 GLU D 84 CB CG CD OE1 OE2 REMARK 470 ASN D 85 CB CG OD1 ND2 REMARK 470 LEU D 86 CB CG CD1 CD2 REMARK 470 ALA D 87 CB REMARK 470 ARG D 88 CB CG CD NE CZ NH1 NH2 REMARK 470 GLU D 89 CB CG CD OE1 OE2 REMARK 470 ALA D 90 CB REMARK 470 LEU D 91 CB CG CD1 CD2 REMARK 470 ALA D 92 CB REMARK 470 ARG D 93 CB CG CD NE CZ NH1 NH2 REMARK 470 LYS D 94 CB CG CD CE NZ REMARK 470 LYS D 95 CB CG CD CE NZ REMARK 470 SER D 96 CB OG REMARK 470 LEU D 97 CB CG CD1 CD2 REMARK 470 THR D 98 CB OG1 CG2 REMARK 470 ASP D 99 CB CG OD1 OD2 REMARK 470 THR D 100 CB OG1 CG2 REMARK 470 ALA D 101 CB REMARK 470 ALA D 102 CB REMARK 470 ALA D 103 CB REMARK 470 TYR D 104 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR D 104 OH REMARK 470 GLN D 105 CB CG CD OE1 NE2 REMARK 470 THR D 106 CB OG1 CG2 REMARK 470 GLN D 107 CB CG CD OE1 NE2 REMARK 470 LEU D 108 CB CG CD1 CD2 REMARK 470 ALA D 109 CB REMARK 470 GLN D 110 CB CG CD OE1 NE2 REMARK 470 GLN D 111 CB CG CD OE1 NE2 REMARK 470 ARG D 112 CB CG CD NE CZ NH1 NH2 REMARK 470 THR D 113 CB OG1 CG2 REMARK 470 MET D 114 CB CG SD CE REMARK 470 SER D 115 CB OG REMARK 470 GLU D 116 CB CG CD OE1 OE2 REMARK 470 ASN D 117 CB CG OD1 ND2 REMARK 470 LEU D 118 CB CG CD1 CD2 REMARK 470 ARG D 119 CB CG CD NE CZ NH1 NH2 REMARK 470 ARG D 120 CB CG CD NE CZ NH1 NH2 REMARK 470 ASN D 121 CB CG OD1 ND2 REMARK 470 LEU D 122 CB CG CD1 CD2 REMARK 470 ALA D 123 CB REMARK 470 ALA D 124 CB REMARK 470 LEU D 125 CB CG CD1 CD2 REMARK 470 GLU D 126 CB CG CD OE1 OE2 REMARK 470 ALA D 127 CB REMARK 470 LYS D 128 CB CG CD CE NZ REMARK 470 ILE D 129 CB CG1 CG2 CD1 REMARK 470 SER D 130 CB OG REMARK 470 GLU D 131 CB CG CD OE1 OE2 REMARK 470 ALA D 132 CB REMARK 470 LYS D 133 CB CG CD CE NZ REMARK 470 THR D 134 CB OG1 CG2 REMARK 470 LYS D 135 CB CG CD CE NZ REMARK 470 LYS D 136 CB CG CD CE NZ REMARK 470 ASN D 137 CB CG OD1 ND2 REMARK 470 MET D 138 CB CG SD CE REMARK 470 LEU D 139 CB CG CD1 CD2 REMARK 470 GLN D 140 CB CG CD OE1 NE2 REMARK 470 ALA D 141 CB REMARK 470 ARG D 142 CB CG CD NE CZ NH1 NH2 REMARK 470 ALA D 143 CB REMARK 470 LYS D 144 CB CG CD CE NZ REMARK 470 ALA D 145 CB REMARK 470 ALA D 146 CB REMARK 470 LYS D 147 CB CG CD CE NZ REMARK 470 ALA D 148 CB REMARK 470 ASN D 149 CB CG OD1 ND2 REMARK 470 ALA D 150 CB REMARK 470 GLU D 151 CB CG CD OE1 OE2 REMARK 470 LEU D 152 CB CG CD1 CD2 REMARK 470 GLN D 153 CB CG CD OE1 NE2 REMARK 470 GLN D 154 CB CG CD OE1 NE2 REMARK 470 THR D 155 CB OG1 CG2 REMARK 470 LEU D 156 CB CG CD1 CD2 REMARK 470 LEU D 159 CB CG CD1 CD2 REMARK 470 THR D 161 CB OG1 CG2 REMARK 470 SER D 162 CB OG REMARK 470 SER D 163 CB OG REMARK 470 ALA D 164 CB REMARK 470 THR D 165 CB OG1 CG2 REMARK 470 SER D 166 CB OG REMARK 470 ALA D 167 CB REMARK 470 PHE D 168 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU D 169 CB CG CD OE1 OE2 REMARK 470 ARG D 170 CB CG CD NE CZ NH1 NH2 REMARK 470 MET D 171 CB CG SD CE REMARK 470 GLU D 172 CB CG CD OE1 OE2 REMARK 470 ASN D 173 CB CG OD1 ND2 REMARK 470 LYS D 174 CB CG CD CE NZ REMARK 470 VAL D 175 CB CG1 CG2 REMARK 470 LEU D 176 CB CG CD1 CD2 REMARK 470 ASP D 177 CB CG OD1 OD2 REMARK 470 MET D 178 CB CG SD CE REMARK 470 GLU D 179 CB CG CD OE1 OE2 REMARK 470 ALA D 180 CB REMARK 470 THR D 181 CB OG1 CG2 REMARK 470 SER D 182 CB OG REMARK 470 GLN D 183 CB CG CD OE1 NE2 REMARK 470 ALA D 184 CB REMARK 470 ALA D 185 CB REMARK 470 GLU D 187 CB CG CD OE1 OE2 REMARK 470 LEU D 188 CB CG CD1 CD2 REMARK 470 ALA D 189 CB REMARK 470 PHE D 191 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE D 193 CB CG1 CG2 CD1 REMARK 470 GLU D 194 CB CG CD OE1 OE2 REMARK 470 ASN D 195 CB CG OD1 ND2 REMARK 470 GLN D 196 CB CG CD OE1 NE2 REMARK 470 PHE D 197 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 ALA D 198 CB REMARK 470 GLN D 199 CB CG CD OE1 NE2 REMARK 470 LEU D 200 CB CG CD1 CD2 REMARK 470 GLU D 201 CB CG CD OE1 OE2 REMARK 470 ALA D 202 CB REMARK 470 SER D 203 CB OG REMARK 470 SER D 204 CB OG REMARK 470 VAL D 206 CB CG1 CG2 REMARK 470 GLU D 207 CB CG CD OE1 OE2 REMARK 470 ASP D 208 CB CG OD1 OD2 REMARK 470 GLU D 209 CB CG CD OE1 OE2 REMARK 470 LEU D 210 CB CG CD1 CD2 REMARK 470 ALA D 211 CB REMARK 470 ALA D 212 CB REMARK 470 LEU D 213 CB CG CD1 CD2 REMARK 470 LYS D 214 CB CG CD CE NZ REMARK 470 ALA D 215 CB REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU D 159 19.71 52.78 REMARK 500 SER D 163 -83.73 -139.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-18427 RELATED DB: EMDB REMARK 900 300A VIPP1 H1-6 HELICAL TUBES IN THE PRESENCE OF EPL DBREF 8QHY D 24 215 UNP Q55707 VIPP1_SYNY3 24 215 SEQRES 1 D 192 ASP PRO GLU LYS VAL LEU GLU GLN ALA VAL ILE ASP MET SEQRES 2 D 192 GLN GLU ASP LEU VAL GLN LEU ARG GLN ALA VAL ALA ARG SEQRES 3 D 192 THR ILE ALA GLU GLU LYS ARG THR GLU GLN ARG LEU ASN SEQRES 4 D 192 GLN ASP THR GLN GLU ALA LYS LYS TRP GLU ASP ARG ALA SEQRES 5 D 192 LYS LEU ALA LEU THR ASN GLY GLU GLU ASN LEU ALA ARG SEQRES 6 D 192 GLU ALA LEU ALA ARG LYS LYS SER LEU THR ASP THR ALA SEQRES 7 D 192 ALA ALA TYR GLN THR GLN LEU ALA GLN GLN ARG THR MET SEQRES 8 D 192 SER GLU ASN LEU ARG ARG ASN LEU ALA ALA LEU GLU ALA SEQRES 9 D 192 LYS ILE SER GLU ALA LYS THR LYS LYS ASN MET LEU GLN SEQRES 10 D 192 ALA ARG ALA LYS ALA ALA LYS ALA ASN ALA GLU LEU GLN SEQRES 11 D 192 GLN THR LEU GLY GLY LEU GLY THR SER SER ALA THR SER SEQRES 12 D 192 ALA PHE GLU ARG MET GLU ASN LYS VAL LEU ASP MET GLU SEQRES 13 D 192 ALA THR SER GLN ALA ALA GLY GLU LEU ALA GLY PHE GLY SEQRES 14 D 192 ILE GLU ASN GLN PHE ALA GLN LEU GLU ALA SER SER GLY SEQRES 15 D 192 VAL GLU ASP GLU LEU ALA ALA LEU LYS ALA HELIX 1 AA1 ASP D 24 ASN D 81 1 58 HELIX 2 AA2 GLU D 83 LEU D 159 1 77 HELIX 3 AA3 SER D 163 ILE D 193 1 31 HELIX 4 AA4 ILE D 193 ALA D 215 1 23 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000