data_8QT6 # _entry.id 8QT6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.395 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8QT6 pdb_00008qt6 10.2210/pdb8qt6/pdb WWPDB D_1292132501 ? ? EMDB EMD-18644 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-07-24 2 'Structure model' 1 1 2024-07-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' em_admin # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.pdbx_database_id_PubMed' 6 2 'Structure model' '_citation.title' 7 2 'Structure model' '_citation_author.identifier_ORCID' 8 2 'Structure model' '_em_admin.last_update' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8QT6 _pdbx_database_status.recvd_initial_deposition_date 2023-10-12 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of Streptococcus pneumoniae NADPH oxidase' _pdbx_database_related.db_id EMD-18644 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 3 _pdbx_contact_author.email bonnie.murphy@biophys.mpg.de _pdbx_contact_author.name_first Bonnie _pdbx_contact_author.name_last Murphy _pdbx_contact_author.name_mi J _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-6341-9368 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Dubach, V.R.A.' 1 0000-0002-1657-7184 'San Segundo-Acosta, P.' 2 0009-0000-1951-1423 'Murphy, B.J.' 3 0000-0001-6341-9368 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1545-9985 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structural and mechanistic insights into Streptococcus pneumoniae NADPH oxidase.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41594-024-01348-w _citation.pdbx_database_id_PubMed 39039317 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Dubach, V.R.A.' 1 ? primary 'San Segundo-Acosta, P.' 2 ? primary 'Murphy, B.J.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'FAD-binding FR-type domain-containing protein' 46060.551 1 ? ? ? ? 2 non-polymer nat 'FLAVIN-ADENINE DINUCLEOTIDE' 785.550 1 ? ? ? ? 3 non-polymer syn 'PROTOPORPHYRIN IX CONTAINING FE' 616.487 2 ? ? ? ? 4 water nat water 18.015 63 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;EFSMKSVKGLLFIIASFILTLLTWMNTSPQFMIPGLALTSLSLTFILATRLPLLESWFHSLEKVYTVHKFTAFLSIILLI FHNFSMGGLWGSRLAAQFGNLAIYIFASIILVAYLGKYIQYEAWRWIHRLVYLAYILGLFHIYMIMGNRLLTFNLLSFLV GSYALLGLLAGFYIIFLYQKISFPYLGKITHLKRLNHDTREIQIHLSRPFNYQSGQFAFLKIFQEGFESAPHPFSISGGH GQTLYFTVKTSGDHTKNIYDNLQAGSKVTLDRAYGHMIIEEGRENQVWIAGGIGITPFISYIREHPILDKQVHFYYSFRG DENAVYLDLLRNYAQKNPNFELHLIDSTKDGYLNFEQKEVPEHATVYMCGPISMMKALAKQIKKQNPKTELIYEGFKFK ; _entity_poly.pdbx_seq_one_letter_code_can ;EFSMKSVKGLLFIIASFILTLLTWMNTSPQFMIPGLALTSLSLTFILATRLPLLESWFHSLEKVYTVHKFTAFLSIILLI FHNFSMGGLWGSRLAAQFGNLAIYIFASIILVAYLGKYIQYEAWRWIHRLVYLAYILGLFHIYMIMGNRLLTFNLLSFLV GSYALLGLLAGFYIIFLYQKISFPYLGKITHLKRLNHDTREIQIHLSRPFNYQSGQFAFLKIFQEGFESAPHPFSISGGH GQTLYFTVKTSGDHTKNIYDNLQAGSKVTLDRAYGHMIIEEGRENQVWIAGGIGITPFISYIREHPILDKQVHFYYSFRG DENAVYLDLLRNYAQKNPNFELHLIDSTKDGYLNFEQKEVPEHATVYMCGPISMMKALAKQIKKQNPKTELIYEGFKFK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FLAVIN-ADENINE DINUCLEOTIDE' FAD 3 'PROTOPORPHYRIN IX CONTAINING FE' HEM 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 PHE n 1 3 SER n 1 4 MET n 1 5 LYS n 1 6 SER n 1 7 VAL n 1 8 LYS n 1 9 GLY n 1 10 LEU n 1 11 LEU n 1 12 PHE n 1 13 ILE n 1 14 ILE n 1 15 ALA n 1 16 SER n 1 17 PHE n 1 18 ILE n 1 19 LEU n 1 20 THR n 1 21 LEU n 1 22 LEU n 1 23 THR n 1 24 TRP n 1 25 MET n 1 26 ASN n 1 27 THR n 1 28 SER n 1 29 PRO n 1 30 GLN n 1 31 PHE n 1 32 MET n 1 33 ILE n 1 34 PRO n 1 35 GLY n 1 36 LEU n 1 37 ALA n 1 38 LEU n 1 39 THR n 1 40 SER n 1 41 LEU n 1 42 SER n 1 43 LEU n 1 44 THR n 1 45 PHE n 1 46 ILE n 1 47 LEU n 1 48 ALA n 1 49 THR n 1 50 ARG n 1 51 LEU n 1 52 PRO n 1 53 LEU n 1 54 LEU n 1 55 GLU n 1 56 SER n 1 57 TRP n 1 58 PHE n 1 59 HIS n 1 60 SER n 1 61 LEU n 1 62 GLU n 1 63 LYS n 1 64 VAL n 1 65 TYR n 1 66 THR n 1 67 VAL n 1 68 HIS n 1 69 LYS n 1 70 PHE n 1 71 THR n 1 72 ALA n 1 73 PHE n 1 74 LEU n 1 75 SER n 1 76 ILE n 1 77 ILE n 1 78 LEU n 1 79 LEU n 1 80 ILE n 1 81 PHE n 1 82 HIS n 1 83 ASN n 1 84 PHE n 1 85 SER n 1 86 MET n 1 87 GLY n 1 88 GLY n 1 89 LEU n 1 90 TRP n 1 91 GLY n 1 92 SER n 1 93 ARG n 1 94 LEU n 1 95 ALA n 1 96 ALA n 1 97 GLN n 1 98 PHE n 1 99 GLY n 1 100 ASN n 1 101 LEU n 1 102 ALA n 1 103 ILE n 1 104 TYR n 1 105 ILE n 1 106 PHE n 1 107 ALA n 1 108 SER n 1 109 ILE n 1 110 ILE n 1 111 LEU n 1 112 VAL n 1 113 ALA n 1 114 TYR n 1 115 LEU n 1 116 GLY n 1 117 LYS n 1 118 TYR n 1 119 ILE n 1 120 GLN n 1 121 TYR n 1 122 GLU n 1 123 ALA n 1 124 TRP n 1 125 ARG n 1 126 TRP n 1 127 ILE n 1 128 HIS n 1 129 ARG n 1 130 LEU n 1 131 VAL n 1 132 TYR n 1 133 LEU n 1 134 ALA n 1 135 TYR n 1 136 ILE n 1 137 LEU n 1 138 GLY n 1 139 LEU n 1 140 PHE n 1 141 HIS n 1 142 ILE n 1 143 TYR n 1 144 MET n 1 145 ILE n 1 146 MET n 1 147 GLY n 1 148 ASN n 1 149 ARG n 1 150 LEU n 1 151 LEU n 1 152 THR n 1 153 PHE n 1 154 ASN n 1 155 LEU n 1 156 LEU n 1 157 SER n 1 158 PHE n 1 159 LEU n 1 160 VAL n 1 161 GLY n 1 162 SER n 1 163 TYR n 1 164 ALA n 1 165 LEU n 1 166 LEU n 1 167 GLY n 1 168 LEU n 1 169 LEU n 1 170 ALA n 1 171 GLY n 1 172 PHE n 1 173 TYR n 1 174 ILE n 1 175 ILE n 1 176 PHE n 1 177 LEU n 1 178 TYR n 1 179 GLN n 1 180 LYS n 1 181 ILE n 1 182 SER n 1 183 PHE n 1 184 PRO n 1 185 TYR n 1 186 LEU n 1 187 GLY n 1 188 LYS n 1 189 ILE n 1 190 THR n 1 191 HIS n 1 192 LEU n 1 193 LYS n 1 194 ARG n 1 195 LEU n 1 196 ASN n 1 197 HIS n 1 198 ASP n 1 199 THR n 1 200 ARG n 1 201 GLU n 1 202 ILE n 1 203 GLN n 1 204 ILE n 1 205 HIS n 1 206 LEU n 1 207 SER n 1 208 ARG n 1 209 PRO n 1 210 PHE n 1 211 ASN n 1 212 TYR n 1 213 GLN n 1 214 SER n 1 215 GLY n 1 216 GLN n 1 217 PHE n 1 218 ALA n 1 219 PHE n 1 220 LEU n 1 221 LYS n 1 222 ILE n 1 223 PHE n 1 224 GLN n 1 225 GLU n 1 226 GLY n 1 227 PHE n 1 228 GLU n 1 229 SER n 1 230 ALA n 1 231 PRO n 1 232 HIS n 1 233 PRO n 1 234 PHE n 1 235 SER n 1 236 ILE n 1 237 SER n 1 238 GLY n 1 239 GLY n 1 240 HIS n 1 241 GLY n 1 242 GLN n 1 243 THR n 1 244 LEU n 1 245 TYR n 1 246 PHE n 1 247 THR n 1 248 VAL n 1 249 LYS n 1 250 THR n 1 251 SER n 1 252 GLY n 1 253 ASP n 1 254 HIS n 1 255 THR n 1 256 LYS n 1 257 ASN n 1 258 ILE n 1 259 TYR n 1 260 ASP n 1 261 ASN n 1 262 LEU n 1 263 GLN n 1 264 ALA n 1 265 GLY n 1 266 SER n 1 267 LYS n 1 268 VAL n 1 269 THR n 1 270 LEU n 1 271 ASP n 1 272 ARG n 1 273 ALA n 1 274 TYR n 1 275 GLY n 1 276 HIS n 1 277 MET n 1 278 ILE n 1 279 ILE n 1 280 GLU n 1 281 GLU n 1 282 GLY n 1 283 ARG n 1 284 GLU n 1 285 ASN n 1 286 GLN n 1 287 VAL n 1 288 TRP n 1 289 ILE n 1 290 ALA n 1 291 GLY n 1 292 GLY n 1 293 ILE n 1 294 GLY n 1 295 ILE n 1 296 THR n 1 297 PRO n 1 298 PHE n 1 299 ILE n 1 300 SER n 1 301 TYR n 1 302 ILE n 1 303 ARG n 1 304 GLU n 1 305 HIS n 1 306 PRO n 1 307 ILE n 1 308 LEU n 1 309 ASP n 1 310 LYS n 1 311 GLN n 1 312 VAL n 1 313 HIS n 1 314 PHE n 1 315 TYR n 1 316 TYR n 1 317 SER n 1 318 PHE n 1 319 ARG n 1 320 GLY n 1 321 ASP n 1 322 GLU n 1 323 ASN n 1 324 ALA n 1 325 VAL n 1 326 TYR n 1 327 LEU n 1 328 ASP n 1 329 LEU n 1 330 LEU n 1 331 ARG n 1 332 ASN n 1 333 TYR n 1 334 ALA n 1 335 GLN n 1 336 LYS n 1 337 ASN n 1 338 PRO n 1 339 ASN n 1 340 PHE n 1 341 GLU n 1 342 LEU n 1 343 HIS n 1 344 LEU n 1 345 ILE n 1 346 ASP n 1 347 SER n 1 348 THR n 1 349 LYS n 1 350 ASP n 1 351 GLY n 1 352 TYR n 1 353 LEU n 1 354 ASN n 1 355 PHE n 1 356 GLU n 1 357 GLN n 1 358 LYS n 1 359 GLU n 1 360 VAL n 1 361 PRO n 1 362 GLU n 1 363 HIS n 1 364 ALA n 1 365 THR n 1 366 VAL n 1 367 TYR n 1 368 MET n 1 369 CYS n 1 370 GLY n 1 371 PRO n 1 372 ILE n 1 373 SER n 1 374 MET n 1 375 MET n 1 376 LYS n 1 377 ALA n 1 378 LEU n 1 379 ALA n 1 380 LYS n 1 381 GLN n 1 382 ILE n 1 383 LYS n 1 384 LYS n 1 385 GLN n 1 386 ASN n 1 387 PRO n 1 388 LYS n 1 389 THR n 1 390 GLU n 1 391 LEU n 1 392 ILE n 1 393 TYR n 1 394 GLU n 1 395 GLY n 1 396 PHE n 1 397 LYS n 1 398 PHE n 1 399 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 399 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene spr0531 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptococcus pneumoniae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1313 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant C41 _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FAD non-polymer . 'FLAVIN-ADENINE DINUCLEOTIDE' ? 'C27 H33 N9 O15 P2' 785.550 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HEM non-polymer . 'PROTOPORPHYRIN IX CONTAINING FE' HEME 'C34 H32 Fe N4 O4' 616.487 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 2 2 GLU GLU A . n A 1 2 PHE 2 3 3 PHE PHE A . n A 1 3 SER 3 4 4 SER SER A . n A 1 4 MET 4 5 5 MET MET A . n A 1 5 LYS 5 6 6 LYS LYS A . n A 1 6 SER 6 7 7 SER SER A . n A 1 7 VAL 7 8 8 VAL VAL A . n A 1 8 LYS 8 9 9 LYS LYS A . n A 1 9 GLY 9 10 10 GLY GLY A . n A 1 10 LEU 10 11 11 LEU LEU A . n A 1 11 LEU 11 12 12 LEU LEU A . n A 1 12 PHE 12 13 13 PHE PHE A . n A 1 13 ILE 13 14 14 ILE ILE A . n A 1 14 ILE 14 15 15 ILE ILE A . n A 1 15 ALA 15 16 16 ALA ALA A . n A 1 16 SER 16 17 17 SER SER A . n A 1 17 PHE 17 18 18 PHE PHE A . n A 1 18 ILE 18 19 19 ILE ILE A . n A 1 19 LEU 19 20 20 LEU LEU A . n A 1 20 THR 20 21 21 THR THR A . n A 1 21 LEU 21 22 22 LEU LEU A . n A 1 22 LEU 22 23 23 LEU LEU A . n A 1 23 THR 23 24 24 THR THR A . n A 1 24 TRP 24 25 25 TRP TRP A . n A 1 25 MET 25 26 26 MET MET A . n A 1 26 ASN 26 27 27 ASN ASN A . n A 1 27 THR 27 28 28 THR THR A . n A 1 28 SER 28 29 29 SER SER A . n A 1 29 PRO 29 30 30 PRO PRO A . n A 1 30 GLN 30 31 31 GLN GLN A . n A 1 31 PHE 31 32 32 PHE PHE A . n A 1 32 MET 32 33 33 MET MET A . n A 1 33 ILE 33 34 34 ILE ILE A . n A 1 34 PRO 34 35 35 PRO PRO A . n A 1 35 GLY 35 36 36 GLY GLY A . n A 1 36 LEU 36 37 37 LEU LEU A . n A 1 37 ALA 37 38 38 ALA ALA A . n A 1 38 LEU 38 39 39 LEU LEU A . n A 1 39 THR 39 40 40 THR THR A . n A 1 40 SER 40 41 41 SER SER A . n A 1 41 LEU 41 42 42 LEU LEU A . n A 1 42 SER 42 43 43 SER SER A . n A 1 43 LEU 43 44 44 LEU LEU A . n A 1 44 THR 44 45 45 THR THR A . n A 1 45 PHE 45 46 46 PHE PHE A . n A 1 46 ILE 46 47 47 ILE ILE A . n A 1 47 LEU 47 48 48 LEU LEU A . n A 1 48 ALA 48 49 49 ALA ALA A . n A 1 49 THR 49 50 50 THR THR A . n A 1 50 ARG 50 51 51 ARG ARG A . n A 1 51 LEU 51 52 52 LEU LEU A . n A 1 52 PRO 52 53 53 PRO PRO A . n A 1 53 LEU 53 54 54 LEU LEU A . n A 1 54 LEU 54 55 55 LEU LEU A . n A 1 55 GLU 55 56 56 GLU GLU A . n A 1 56 SER 56 57 57 SER SER A . n A 1 57 TRP 57 58 58 TRP TRP A . n A 1 58 PHE 58 59 59 PHE PHE A . n A 1 59 HIS 59 60 60 HIS HIS A . n A 1 60 SER 60 61 61 SER SER A . n A 1 61 LEU 61 62 62 LEU LEU A . n A 1 62 GLU 62 63 63 GLU GLU A . n A 1 63 LYS 63 64 64 LYS LYS A . n A 1 64 VAL 64 65 65 VAL VAL A . n A 1 65 TYR 65 66 66 TYR TYR A . n A 1 66 THR 66 67 67 THR THR A . n A 1 67 VAL 67 68 68 VAL VAL A . n A 1 68 HIS 68 69 69 HIS HIS A . n A 1 69 LYS 69 70 70 LYS LYS A . n A 1 70 PHE 70 71 71 PHE PHE A . n A 1 71 THR 71 72 72 THR THR A . n A 1 72 ALA 72 73 73 ALA ALA A . n A 1 73 PHE 73 74 74 PHE PHE A . n A 1 74 LEU 74 75 75 LEU LEU A . n A 1 75 SER 75 76 76 SER SER A . n A 1 76 ILE 76 77 77 ILE ILE A . n A 1 77 ILE 77 78 78 ILE ILE A . n A 1 78 LEU 78 79 79 LEU LEU A . n A 1 79 LEU 79 80 80 LEU LEU A . n A 1 80 ILE 80 81 81 ILE ILE A . n A 1 81 PHE 81 82 82 PHE PHE A . n A 1 82 HIS 82 83 83 HIS HIS A . n A 1 83 ASN 83 84 84 ASN ASN A . n A 1 84 PHE 84 85 85 PHE PHE A . n A 1 85 SER 85 86 86 SER SER A . n A 1 86 MET 86 87 87 MET MET A . n A 1 87 GLY 87 88 88 GLY GLY A . n A 1 88 GLY 88 89 89 GLY GLY A . n A 1 89 LEU 89 90 90 LEU LEU A . n A 1 90 TRP 90 91 91 TRP TRP A . n A 1 91 GLY 91 92 92 GLY GLY A . n A 1 92 SER 92 93 93 SER SER A . n A 1 93 ARG 93 94 94 ARG ARG A . n A 1 94 LEU 94 95 95 LEU LEU A . n A 1 95 ALA 95 96 96 ALA ALA A . n A 1 96 ALA 96 97 97 ALA ALA A . n A 1 97 GLN 97 98 98 GLN GLN A . n A 1 98 PHE 98 99 99 PHE PHE A . n A 1 99 GLY 99 100 100 GLY GLY A . n A 1 100 ASN 100 101 101 ASN ASN A . n A 1 101 LEU 101 102 102 LEU LEU A . n A 1 102 ALA 102 103 103 ALA ALA A . n A 1 103 ILE 103 104 104 ILE ILE A . n A 1 104 TYR 104 105 105 TYR TYR A . n A 1 105 ILE 105 106 106 ILE ILE A . n A 1 106 PHE 106 107 107 PHE PHE A . n A 1 107 ALA 107 108 108 ALA ALA A . n A 1 108 SER 108 109 109 SER SER A . n A 1 109 ILE 109 110 110 ILE ILE A . n A 1 110 ILE 110 111 111 ILE ILE A . n A 1 111 LEU 111 112 112 LEU LEU A . n A 1 112 VAL 112 113 113 VAL VAL A . n A 1 113 ALA 113 114 114 ALA ALA A . n A 1 114 TYR 114 115 115 TYR TYR A . n A 1 115 LEU 115 116 116 LEU LEU A . n A 1 116 GLY 116 117 117 GLY GLY A . n A 1 117 LYS 117 118 118 LYS LYS A . n A 1 118 TYR 118 119 119 TYR TYR A . n A 1 119 ILE 119 120 120 ILE ILE A . n A 1 120 GLN 120 121 121 GLN GLN A . n A 1 121 TYR 121 122 122 TYR TYR A . n A 1 122 GLU 122 123 123 GLU GLU A . n A 1 123 ALA 123 124 124 ALA ALA A . n A 1 124 TRP 124 125 125 TRP TRP A . n A 1 125 ARG 125 126 126 ARG ARG A . n A 1 126 TRP 126 127 127 TRP TRP A . n A 1 127 ILE 127 128 128 ILE ILE A . n A 1 128 HIS 128 129 129 HIS HIS A . n A 1 129 ARG 129 130 130 ARG ARG A . n A 1 130 LEU 130 131 131 LEU LEU A . n A 1 131 VAL 131 132 132 VAL VAL A . n A 1 132 TYR 132 133 133 TYR TYR A . n A 1 133 LEU 133 134 134 LEU LEU A . n A 1 134 ALA 134 135 135 ALA ALA A . n A 1 135 TYR 135 136 136 TYR TYR A . n A 1 136 ILE 136 137 137 ILE ILE A . n A 1 137 LEU 137 138 138 LEU LEU A . n A 1 138 GLY 138 139 139 GLY GLY A . n A 1 139 LEU 139 140 140 LEU LEU A . n A 1 140 PHE 140 141 141 PHE PHE A . n A 1 141 HIS 141 142 142 HIS HIS A . n A 1 142 ILE 142 143 143 ILE ILE A . n A 1 143 TYR 143 144 144 TYR TYR A . n A 1 144 MET 144 145 145 MET MET A . n A 1 145 ILE 145 146 146 ILE ILE A . n A 1 146 MET 146 147 147 MET MET A . n A 1 147 GLY 147 148 148 GLY GLY A . n A 1 148 ASN 148 149 149 ASN ASN A . n A 1 149 ARG 149 150 150 ARG ARG A . n A 1 150 LEU 150 151 151 LEU LEU A . n A 1 151 LEU 151 152 152 LEU LEU A . n A 1 152 THR 152 153 153 THR THR A . n A 1 153 PHE 153 154 154 PHE PHE A . n A 1 154 ASN 154 155 155 ASN ASN A . n A 1 155 LEU 155 156 156 LEU LEU A . n A 1 156 LEU 156 157 157 LEU LEU A . n A 1 157 SER 157 158 158 SER SER A . n A 1 158 PHE 158 159 159 PHE PHE A . n A 1 159 LEU 159 160 160 LEU LEU A . n A 1 160 VAL 160 161 161 VAL VAL A . n A 1 161 GLY 161 162 162 GLY GLY A . n A 1 162 SER 162 163 163 SER SER A . n A 1 163 TYR 163 164 164 TYR TYR A . n A 1 164 ALA 164 165 165 ALA ALA A . n A 1 165 LEU 165 166 166 LEU LEU A . n A 1 166 LEU 166 167 167 LEU LEU A . n A 1 167 GLY 167 168 168 GLY GLY A . n A 1 168 LEU 168 169 169 LEU LEU A . n A 1 169 LEU 169 170 170 LEU LEU A . n A 1 170 ALA 170 171 171 ALA ALA A . n A 1 171 GLY 171 172 172 GLY GLY A . n A 1 172 PHE 172 173 173 PHE PHE A . n A 1 173 TYR 173 174 174 TYR TYR A . n A 1 174 ILE 174 175 175 ILE ILE A . n A 1 175 ILE 175 176 176 ILE ILE A . n A 1 176 PHE 176 177 177 PHE PHE A . n A 1 177 LEU 177 178 178 LEU LEU A . n A 1 178 TYR 178 179 179 TYR TYR A . n A 1 179 GLN 179 180 180 GLN GLN A . n A 1 180 LYS 180 181 181 LYS LYS A . n A 1 181 ILE 181 182 182 ILE ILE A . n A 1 182 SER 182 183 183 SER SER A . n A 1 183 PHE 183 184 184 PHE PHE A . n A 1 184 PRO 184 185 185 PRO PRO A . n A 1 185 TYR 185 186 186 TYR TYR A . n A 1 186 LEU 186 187 187 LEU LEU A . n A 1 187 GLY 187 188 188 GLY GLY A . n A 1 188 LYS 188 189 189 LYS LYS A . n A 1 189 ILE 189 190 190 ILE ILE A . n A 1 190 THR 190 191 191 THR THR A . n A 1 191 HIS 191 192 192 HIS HIS A . n A 1 192 LEU 192 193 193 LEU LEU A . n A 1 193 LYS 193 194 194 LYS LYS A . n A 1 194 ARG 194 195 195 ARG ARG A . n A 1 195 LEU 195 196 196 LEU LEU A . n A 1 196 ASN 196 197 197 ASN ASN A . n A 1 197 HIS 197 198 198 HIS HIS A . n A 1 198 ASP 198 199 199 ASP ASP A . n A 1 199 THR 199 200 200 THR THR A . n A 1 200 ARG 200 201 201 ARG ARG A . n A 1 201 GLU 201 202 202 GLU GLU A . n A 1 202 ILE 202 203 203 ILE ILE A . n A 1 203 GLN 203 204 204 GLN GLN A . n A 1 204 ILE 204 205 205 ILE ILE A . n A 1 205 HIS 205 206 206 HIS HIS A . n A 1 206 LEU 206 207 207 LEU LEU A . n A 1 207 SER 207 208 208 SER SER A . n A 1 208 ARG 208 209 209 ARG ARG A . n A 1 209 PRO 209 210 210 PRO PRO A . n A 1 210 PHE 210 211 211 PHE PHE A . n A 1 211 ASN 211 212 212 ASN ASN A . n A 1 212 TYR 212 213 213 TYR TYR A . n A 1 213 GLN 213 214 214 GLN GLN A . n A 1 214 SER 214 215 215 SER SER A . n A 1 215 GLY 215 216 216 GLY GLY A . n A 1 216 GLN 216 217 217 GLN GLN A . n A 1 217 PHE 217 218 218 PHE PHE A . n A 1 218 ALA 218 219 219 ALA ALA A . n A 1 219 PHE 219 220 220 PHE PHE A . n A 1 220 LEU 220 221 221 LEU LEU A . n A 1 221 LYS 221 222 222 LYS LYS A . n A 1 222 ILE 222 223 223 ILE ILE A . n A 1 223 PHE 223 224 224 PHE PHE A . n A 1 224 GLN 224 225 225 GLN GLN A . n A 1 225 GLU 225 226 226 GLU GLU A . n A 1 226 GLY 226 227 227 GLY GLY A . n A 1 227 PHE 227 228 228 PHE PHE A . n A 1 228 GLU 228 229 229 GLU GLU A . n A 1 229 SER 229 230 230 SER SER A . n A 1 230 ALA 230 231 231 ALA ALA A . n A 1 231 PRO 231 232 232 PRO PRO A . n A 1 232 HIS 232 233 233 HIS HIS A . n A 1 233 PRO 233 234 234 PRO PRO A . n A 1 234 PHE 234 235 235 PHE PHE A . n A 1 235 SER 235 236 236 SER SER A . n A 1 236 ILE 236 237 237 ILE ILE A . n A 1 237 SER 237 238 238 SER SER A . n A 1 238 GLY 238 239 239 GLY GLY A . n A 1 239 GLY 239 240 240 GLY GLY A . n A 1 240 HIS 240 241 241 HIS HIS A . n A 1 241 GLY 241 242 242 GLY GLY A . n A 1 242 GLN 242 243 243 GLN GLN A . n A 1 243 THR 243 244 244 THR THR A . n A 1 244 LEU 244 245 245 LEU LEU A . n A 1 245 TYR 245 246 246 TYR TYR A . n A 1 246 PHE 246 247 247 PHE PHE A . n A 1 247 THR 247 248 248 THR THR A . n A 1 248 VAL 248 249 249 VAL VAL A . n A 1 249 LYS 249 250 250 LYS LYS A . n A 1 250 THR 250 251 251 THR THR A . n A 1 251 SER 251 252 252 SER SER A . n A 1 252 GLY 252 253 253 GLY GLY A . n A 1 253 ASP 253 254 254 ASP ASP A . n A 1 254 HIS 254 255 255 HIS HIS A . n A 1 255 THR 255 256 256 THR THR A . n A 1 256 LYS 256 257 257 LYS LYS A . n A 1 257 ASN 257 258 258 ASN ASN A . n A 1 258 ILE 258 259 259 ILE ILE A . n A 1 259 TYR 259 260 260 TYR TYR A . n A 1 260 ASP 260 261 261 ASP ASP A . n A 1 261 ASN 261 262 262 ASN ASN A . n A 1 262 LEU 262 263 263 LEU LEU A . n A 1 263 GLN 263 264 264 GLN GLN A . n A 1 264 ALA 264 265 265 ALA ALA A . n A 1 265 GLY 265 266 266 GLY GLY A . n A 1 266 SER 266 267 267 SER SER A . n A 1 267 LYS 267 268 268 LYS LYS A . n A 1 268 VAL 268 269 269 VAL VAL A . n A 1 269 THR 269 270 270 THR THR A . n A 1 270 LEU 270 271 271 LEU LEU A . n A 1 271 ASP 271 272 272 ASP ASP A . n A 1 272 ARG 272 273 273 ARG ARG A . n A 1 273 ALA 273 274 274 ALA ALA A . n A 1 274 TYR 274 275 275 TYR TYR A . n A 1 275 GLY 275 276 276 GLY GLY A . n A 1 276 HIS 276 277 277 HIS HIS A . n A 1 277 MET 277 278 278 MET MET A . n A 1 278 ILE 278 279 279 ILE ILE A . n A 1 279 ILE 279 280 280 ILE ILE A . n A 1 280 GLU 280 281 281 GLU GLU A . n A 1 281 GLU 281 282 282 GLU GLU A . n A 1 282 GLY 282 283 283 GLY GLY A . n A 1 283 ARG 283 284 284 ARG ARG A . n A 1 284 GLU 284 285 285 GLU GLU A . n A 1 285 ASN 285 286 286 ASN ASN A . n A 1 286 GLN 286 287 287 GLN GLN A . n A 1 287 VAL 287 288 288 VAL VAL A . n A 1 288 TRP 288 289 289 TRP TRP A . n A 1 289 ILE 289 290 290 ILE ILE A . n A 1 290 ALA 290 291 291 ALA ALA A . n A 1 291 GLY 291 292 292 GLY GLY A . n A 1 292 GLY 292 293 293 GLY GLY A . n A 1 293 ILE 293 294 294 ILE ILE A . n A 1 294 GLY 294 295 295 GLY GLY A . n A 1 295 ILE 295 296 296 ILE ILE A . n A 1 296 THR 296 297 297 THR THR A . n A 1 297 PRO 297 298 298 PRO PRO A . n A 1 298 PHE 298 299 299 PHE PHE A . n A 1 299 ILE 299 300 300 ILE ILE A . n A 1 300 SER 300 301 301 SER SER A . n A 1 301 TYR 301 302 302 TYR TYR A . n A 1 302 ILE 302 303 303 ILE ILE A . n A 1 303 ARG 303 304 304 ARG ARG A . n A 1 304 GLU 304 305 305 GLU GLU A . n A 1 305 HIS 305 306 306 HIS HIS A . n A 1 306 PRO 306 307 307 PRO PRO A . n A 1 307 ILE 307 308 308 ILE ILE A . n A 1 308 LEU 308 309 309 LEU LEU A . n A 1 309 ASP 309 310 310 ASP ASP A . n A 1 310 LYS 310 311 311 LYS LYS A . n A 1 311 GLN 311 312 312 GLN GLN A . n A 1 312 VAL 312 313 313 VAL VAL A . n A 1 313 HIS 313 314 314 HIS HIS A . n A 1 314 PHE 314 315 315 PHE PHE A . n A 1 315 TYR 315 316 316 TYR TYR A . n A 1 316 TYR 316 317 317 TYR TYR A . n A 1 317 SER 317 318 318 SER SER A . n A 1 318 PHE 318 319 319 PHE PHE A . n A 1 319 ARG 319 320 320 ARG ARG A . n A 1 320 GLY 320 321 321 GLY GLY A . n A 1 321 ASP 321 322 322 ASP ASP A . n A 1 322 GLU 322 323 323 GLU GLU A . n A 1 323 ASN 323 324 324 ASN ASN A . n A 1 324 ALA 324 325 325 ALA ALA A . n A 1 325 VAL 325 326 326 VAL VAL A . n A 1 326 TYR 326 327 327 TYR TYR A . n A 1 327 LEU 327 328 328 LEU LEU A . n A 1 328 ASP 328 329 329 ASP ASP A . n A 1 329 LEU 329 330 330 LEU LEU A . n A 1 330 LEU 330 331 331 LEU LEU A . n A 1 331 ARG 331 332 332 ARG ARG A . n A 1 332 ASN 332 333 333 ASN ASN A . n A 1 333 TYR 333 334 334 TYR TYR A . n A 1 334 ALA 334 335 335 ALA ALA A . n A 1 335 GLN 335 336 336 GLN GLN A . n A 1 336 LYS 336 337 337 LYS LYS A . n A 1 337 ASN 337 338 338 ASN ASN A . n A 1 338 PRO 338 339 339 PRO PRO A . n A 1 339 ASN 339 340 340 ASN ASN A . n A 1 340 PHE 340 341 341 PHE PHE A . n A 1 341 GLU 341 342 342 GLU GLU A . n A 1 342 LEU 342 343 343 LEU LEU A . n A 1 343 HIS 343 344 344 HIS HIS A . n A 1 344 LEU 344 345 345 LEU LEU A . n A 1 345 ILE 345 346 346 ILE ILE A . n A 1 346 ASP 346 347 347 ASP ASP A . n A 1 347 SER 347 348 348 SER SER A . n A 1 348 THR 348 349 349 THR THR A . n A 1 349 LYS 349 350 350 LYS LYS A . n A 1 350 ASP 350 351 351 ASP ASP A . n A 1 351 GLY 351 352 352 GLY GLY A . n A 1 352 TYR 352 353 353 TYR TYR A . n A 1 353 LEU 353 354 354 LEU LEU A . n A 1 354 ASN 354 355 355 ASN ASN A . n A 1 355 PHE 355 356 356 PHE PHE A . n A 1 356 GLU 356 357 357 GLU GLU A . n A 1 357 GLN 357 358 358 GLN GLN A . n A 1 358 LYS 358 359 359 LYS LYS A . n A 1 359 GLU 359 360 360 GLU GLU A . n A 1 360 VAL 360 361 361 VAL VAL A . n A 1 361 PRO 361 362 362 PRO PRO A . n A 1 362 GLU 362 363 363 GLU GLU A . n A 1 363 HIS 363 364 364 HIS HIS A . n A 1 364 ALA 364 365 365 ALA ALA A . n A 1 365 THR 365 366 366 THR THR A . n A 1 366 VAL 366 367 367 VAL VAL A . n A 1 367 TYR 367 368 368 TYR TYR A . n A 1 368 MET 368 369 369 MET MET A . n A 1 369 CYS 369 370 370 CYS CYS A . n A 1 370 GLY 370 371 371 GLY GLY A . n A 1 371 PRO 371 372 372 PRO PRO A . n A 1 372 ILE 372 373 373 ILE ILE A . n A 1 373 SER 373 374 374 SER SER A . n A 1 374 MET 374 375 375 MET MET A . n A 1 375 MET 375 376 376 MET MET A . n A 1 376 LYS 376 377 377 LYS LYS A . n A 1 377 ALA 377 378 378 ALA ALA A . n A 1 378 LEU 378 379 379 LEU LEU A . n A 1 379 ALA 379 380 380 ALA ALA A . n A 1 380 LYS 380 381 381 LYS LYS A . n A 1 381 GLN 381 382 382 GLN GLN A . n A 1 382 ILE 382 383 383 ILE ILE A . n A 1 383 LYS 383 384 384 LYS LYS A . n A 1 384 LYS 384 385 385 LYS LYS A . n A 1 385 GLN 385 386 386 GLN GLN A . n A 1 386 ASN 386 387 387 ASN ASN A . n A 1 387 PRO 387 388 388 PRO PRO A . n A 1 388 LYS 388 389 389 LYS LYS A . n A 1 389 THR 389 390 390 THR THR A . n A 1 390 GLU 390 391 391 GLU GLU A . n A 1 391 LEU 391 392 392 LEU LEU A . n A 1 392 ILE 392 393 393 ILE ILE A . n A 1 393 TYR 393 394 394 TYR TYR A . n A 1 394 GLU 394 395 395 GLU GLU A . n A 1 395 GLY 395 396 396 GLY GLY A . n A 1 396 PHE 396 397 397 PHE PHE A . n A 1 397 LYS 397 398 398 LYS LYS A . n A 1 398 PHE 398 399 399 PHE PHE A . n A 1 399 LYS 399 400 400 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD 1 501 506 FAD FAD A . C 3 HEM 1 502 507 HEM HEM A . D 3 HEM 1 503 508 HEM HEM A . E 4 HOH 1 601 4 HOH HOH A . E 4 HOH 2 602 42 HOH HOH A . E 4 HOH 3 603 9 HOH HOH A . E 4 HOH 4 604 10 HOH HOH A . E 4 HOH 5 605 31 HOH HOH A . E 4 HOH 6 606 49 HOH HOH A . E 4 HOH 7 607 48 HOH HOH A . E 4 HOH 8 608 39 HOH HOH A . E 4 HOH 9 609 52 HOH HOH A . E 4 HOH 10 610 47 HOH HOH A . E 4 HOH 11 611 51 HOH HOH A . E 4 HOH 12 612 38 HOH HOH A . E 4 HOH 13 613 15 HOH HOH A . E 4 HOH 14 614 59 HOH HOH A . E 4 HOH 15 615 36 HOH HOH A . E 4 HOH 16 616 22 HOH HOH A . E 4 HOH 17 617 3 HOH HOH A . E 4 HOH 18 618 46 HOH HOH A . E 4 HOH 19 619 44 HOH HOH A . E 4 HOH 20 620 37 HOH HOH A . E 4 HOH 21 621 33 HOH HOH A . E 4 HOH 22 622 11 HOH HOH A . E 4 HOH 23 623 6 HOH HOH A . E 4 HOH 24 624 28 HOH HOH A . E 4 HOH 25 625 60 HOH HOH A . E 4 HOH 26 626 40 HOH HOH A . E 4 HOH 27 627 63 HOH HOH A . E 4 HOH 28 628 5 HOH HOH A . E 4 HOH 29 629 57 HOH HOH A . E 4 HOH 30 630 23 HOH HOH A . E 4 HOH 31 631 19 HOH HOH A . E 4 HOH 32 632 7 HOH HOH A . E 4 HOH 33 633 8 HOH HOH A . E 4 HOH 34 634 16 HOH HOH A . E 4 HOH 35 635 17 HOH HOH A . E 4 HOH 36 636 35 HOH HOH A . E 4 HOH 37 637 58 HOH HOH A . E 4 HOH 38 638 43 HOH HOH A . E 4 HOH 39 639 21 HOH HOH A . E 4 HOH 40 640 45 HOH HOH A . E 4 HOH 41 641 61 HOH HOH A . E 4 HOH 42 642 20 HOH HOH A . E 4 HOH 43 643 12 HOH HOH A . E 4 HOH 44 644 34 HOH HOH A . E 4 HOH 45 645 56 HOH HOH A . E 4 HOH 46 646 62 HOH HOH A . E 4 HOH 47 647 24 HOH HOH A . E 4 HOH 48 648 18 HOH HOH A . E 4 HOH 49 649 41 HOH HOH A . E 4 HOH 50 650 14 HOH HOH A . E 4 HOH 51 651 1 HOH HOH A . E 4 HOH 52 652 30 HOH HOH A . E 4 HOH 53 653 26 HOH HOH A . E 4 HOH 54 654 27 HOH HOH A . E 4 HOH 55 655 32 HOH HOH A . E 4 HOH 56 656 29 HOH HOH A . E 4 HOH 57 657 54 HOH HOH A . E 4 HOH 58 658 13 HOH HOH A . E 4 HOH 59 659 55 HOH HOH A . E 4 HOH 60 660 2 HOH HOH A . E 4 HOH 61 661 50 HOH HOH A . E 4 HOH 62 662 53 HOH HOH A . E 4 HOH 63 663 25 HOH HOH A . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8QT6 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8QT6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8QT6 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 8QT6 _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.003 ? 3518 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.522 ? 4801 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 9.487 ? 456 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.037 ? 501 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.002 ? 576 ? f_plane_restr ? ? # _struct.entry_id 8QT6 _struct.title 'Cryo-EM structure of Streptococcus pneumoniae NADPH oxidase' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8QT6 _struct_keywords.text 'NADPH oxidase, ROS producing, flavoprotein, heme protein, MEMBRANE PROTEIN' _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8CZ28_STRR6 _struct_ref.pdbx_db_accession Q8CZ28 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EFSMKSVKGLLFIIASFILTLLTWMNTSPQFMIPGLALTSLSLTFILATRLPLLESWFHSLEKVYTVHKFTAFLSIILLI FHNFSMGGLWGSRLAAQFGNLAIYIFASIILVAYLGKYIQYEAWRWIHRLVYLAYILGLFHIYMIMGNRLLTFNLLSFLV GSYALLGLLAGFYIIFLYQKISFPYLGKITHLKRLNHDTREIQIHLSRPFNYQSGQFAFLKIFQEGFESAPHPFSISGGH GQTLYFTVKTSGDHTKNIYDNLQAGSKVTLDRAYGHMIIEEGRENQVWIAGGIGITPFISYIREHPILDKQVHFYYSFRG DENAVYLDLLRNYAQKNPNFELHLIDSTKDGYLNFEQKEVPEHATVYMCGPISMMKALAKQIKKQNPKTELIYEGFKFK ; _struct_ref.pdbx_align_begin 2 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8QT6 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 399 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8CZ28 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 400 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 400 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 3 ? LYS A 5 ? SER A 4 LYS A 6 5 ? 3 HELX_P HELX_P2 AA2 SER A 6 ? SER A 28 ? SER A 7 SER A 29 1 ? 23 HELX_P HELX_P3 AA3 PHE A 31 ? LEU A 47 ? PHE A 32 LEU A 48 1 ? 17 HELX_P HELX_P4 AA4 LEU A 51 ? HIS A 59 ? LEU A 52 HIS A 60 1 ? 9 HELX_P HELX_P5 AA5 SER A 60 ? GLY A 87 ? SER A 61 GLY A 88 1 ? 28 HELX_P HELX_P6 AA6 ARG A 93 ? TYR A 114 ? ARG A 94 TYR A 115 1 ? 22 HELX_P HELX_P7 AA7 GLN A 120 ? ARG A 129 ? GLN A 121 ARG A 130 1 ? 10 HELX_P HELX_P8 AA8 LEU A 130 ? GLY A 147 ? LEU A 131 GLY A 148 1 ? 18 HELX_P HELX_P9 AA9 ASN A 148 ? LEU A 151 ? ASN A 149 LEU A 152 5 ? 4 HELX_P HELX_P10 AB1 ASN A 154 ? LEU A 177 ? ASN A 155 LEU A 178 1 ? 24 HELX_P HELX_P11 AB2 LEU A 177 ? SER A 182 ? LEU A 178 SER A 183 1 ? 6 HELX_P HELX_P12 AB3 GLY A 252 ? LEU A 262 ? GLY A 253 LEU A 263 1 ? 11 HELX_P HELX_P13 AB4 ILE A 278 ? GLY A 282 ? ILE A 279 GLY A 283 5 ? 5 HELX_P HELX_P14 AB5 ILE A 295 ? HIS A 305 ? ILE A 296 HIS A 306 1 ? 11 HELX_P HELX_P15 AB6 GLY A 320 ? ALA A 324 ? GLY A 321 ALA A 325 5 ? 5 HELX_P HELX_P16 AB7 TYR A 326 ? ASN A 337 ? TYR A 327 ASN A 338 1 ? 12 HELX_P HELX_P17 AB8 PRO A 371 ? ASN A 386 ? PRO A 372 ASN A 387 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 68 NE2 ? ? ? 1_555 D HEM . FE ? ? A HIS 69 A HEM 503 1_555 ? ? ? ? ? ? ? 2.112 ? ? metalc2 metalc ? ? A HIS 82 NE2 ? ? ? 1_555 C HEM . FE ? ? A HIS 83 A HEM 502 1_555 ? ? ? ? ? ? ? 2.266 ? ? metalc3 metalc ? ? A HIS 128 NE2 ? ? ? 1_555 D HEM . FE ? ? A HIS 129 A HEM 503 1_555 ? ? ? ? ? ? ? 2.174 ? ? metalc4 metalc ? ? A HIS 141 NE2 ? ? ? 1_555 C HEM . FE ? ? A HIS 142 A HEM 502 1_555 ? ? ? ? ? ? ? 2.295 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 68 ? A HIS 69 ? 1_555 FE ? D HEM . ? A HEM 503 ? 1_555 NA ? D HEM . ? A HEM 503 ? 1_555 105.8 ? 2 NE2 ? A HIS 68 ? A HIS 69 ? 1_555 FE ? D HEM . ? A HEM 503 ? 1_555 NB ? D HEM . ? A HEM 503 ? 1_555 86.8 ? 3 NA ? D HEM . ? A HEM 503 ? 1_555 FE ? D HEM . ? A HEM 503 ? 1_555 NB ? D HEM . ? A HEM 503 ? 1_555 90.6 ? 4 NE2 ? A HIS 68 ? A HIS 69 ? 1_555 FE ? D HEM . ? A HEM 503 ? 1_555 NC ? D HEM . ? A HEM 503 ? 1_555 68.6 ? 5 NA ? D HEM . ? A HEM 503 ? 1_555 FE ? D HEM . ? A HEM 503 ? 1_555 NC ? D HEM . ? A HEM 503 ? 1_555 174.4 ? 6 NB ? D HEM . ? A HEM 503 ? 1_555 FE ? D HEM . ? A HEM 503 ? 1_555 NC ? D HEM . ? A HEM 503 ? 1_555 89.3 ? 7 NE2 ? A HIS 68 ? A HIS 69 ? 1_555 FE ? D HEM . ? A HEM 503 ? 1_555 ND ? D HEM . ? A HEM 503 ? 1_555 94.4 ? 8 NA ? D HEM . ? A HEM 503 ? 1_555 FE ? D HEM . ? A HEM 503 ? 1_555 ND ? D HEM . ? A HEM 503 ? 1_555 89.4 ? 9 NB ? D HEM . ? A HEM 503 ? 1_555 FE ? D HEM . ? A HEM 503 ? 1_555 ND ? D HEM . ? A HEM 503 ? 1_555 178.8 ? 10 NC ? D HEM . ? A HEM 503 ? 1_555 FE ? D HEM . ? A HEM 503 ? 1_555 ND ? D HEM . ? A HEM 503 ? 1_555 90.8 ? 11 NE2 ? A HIS 68 ? A HIS 69 ? 1_555 FE ? D HEM . ? A HEM 503 ? 1_555 NE2 ? A HIS 128 ? A HIS 129 ? 1_555 157.7 ? 12 NA ? D HEM . ? A HEM 503 ? 1_555 FE ? D HEM . ? A HEM 503 ? 1_555 NE2 ? A HIS 128 ? A HIS 129 ? 1_555 92.6 ? 13 NB ? D HEM . ? A HEM 503 ? 1_555 FE ? D HEM . ? A HEM 503 ? 1_555 NE2 ? A HIS 128 ? A HIS 129 ? 1_555 80.3 ? 14 NC ? D HEM . ? A HEM 503 ? 1_555 FE ? D HEM . ? A HEM 503 ? 1_555 NE2 ? A HIS 128 ? A HIS 129 ? 1_555 93.0 ? 15 ND ? D HEM . ? A HEM 503 ? 1_555 FE ? D HEM . ? A HEM 503 ? 1_555 NE2 ? A HIS 128 ? A HIS 129 ? 1_555 98.5 ? 16 NE2 ? A HIS 82 ? A HIS 83 ? 1_555 FE ? C HEM . ? A HEM 502 ? 1_555 NA ? C HEM . ? A HEM 502 ? 1_555 80.4 ? 17 NE2 ? A HIS 82 ? A HIS 83 ? 1_555 FE ? C HEM . ? A HEM 502 ? 1_555 NB ? C HEM . ? A HEM 502 ? 1_555 91.7 ? 18 NA ? C HEM . ? A HEM 502 ? 1_555 FE ? C HEM . ? A HEM 502 ? 1_555 NB ? C HEM . ? A HEM 502 ? 1_555 89.5 ? 19 NE2 ? A HIS 82 ? A HIS 83 ? 1_555 FE ? C HEM . ? A HEM 502 ? 1_555 NC ? C HEM . ? A HEM 502 ? 1_555 95.7 ? 20 NA ? C HEM . ? A HEM 502 ? 1_555 FE ? C HEM . ? A HEM 502 ? 1_555 NC ? C HEM . ? A HEM 502 ? 1_555 176.2 ? 21 NB ? C HEM . ? A HEM 502 ? 1_555 FE ? C HEM . ? A HEM 502 ? 1_555 NC ? C HEM . ? A HEM 502 ? 1_555 90.5 ? 22 NE2 ? A HIS 82 ? A HIS 83 ? 1_555 FE ? C HEM . ? A HEM 502 ? 1_555 ND ? C HEM . ? A HEM 502 ? 1_555 89.5 ? 23 NA ? C HEM . ? A HEM 502 ? 1_555 FE ? C HEM . ? A HEM 502 ? 1_555 ND ? C HEM . ? A HEM 502 ? 1_555 90.4 ? 24 NB ? C HEM . ? A HEM 502 ? 1_555 FE ? C HEM . ? A HEM 502 ? 1_555 ND ? C HEM . ? A HEM 502 ? 1_555 178.8 ? 25 NC ? C HEM . ? A HEM 502 ? 1_555 FE ? C HEM . ? A HEM 502 ? 1_555 ND ? C HEM . ? A HEM 502 ? 1_555 89.7 ? 26 NE2 ? A HIS 82 ? A HIS 83 ? 1_555 FE ? C HEM . ? A HEM 502 ? 1_555 NE2 ? A HIS 141 ? A HIS 142 ? 1_555 170.0 ? 27 NA ? C HEM . ? A HEM 502 ? 1_555 FE ? C HEM . ? A HEM 502 ? 1_555 NE2 ? A HIS 141 ? A HIS 142 ? 1_555 90.1 ? 28 NB ? C HEM . ? A HEM 502 ? 1_555 FE ? C HEM . ? A HEM 502 ? 1_555 NE2 ? A HIS 141 ? A HIS 142 ? 1_555 91.5 ? 29 NC ? C HEM . ? A HEM 502 ? 1_555 FE ? C HEM . ? A HEM 502 ? 1_555 NE2 ? A HIS 141 ? A HIS 142 ? 1_555 93.7 ? 30 ND ? C HEM . ? A HEM 502 ? 1_555 FE ? C HEM . ? A HEM 502 ? 1_555 NE2 ? A HIS 141 ? A HIS 142 ? 1_555 87.3 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? parallel AA2 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 HIS A 232 ? SER A 235 ? HIS A 233 SER A 236 AA1 2 PHE A 217 ? PHE A 223 ? PHE A 218 PHE A 224 AA1 3 LYS A 267 ? LEU A 270 ? LYS A 268 LEU A 271 AA1 4 TYR A 185 ? ARG A 194 ? TYR A 186 ARG A 195 AA1 5 THR A 199 ? LEU A 206 ? THR A 200 LEU A 207 AA1 6 THR A 243 ? LYS A 249 ? THR A 244 LYS A 250 AA2 1 PHE A 340 ? ASP A 346 ? PHE A 341 ASP A 347 AA2 2 GLN A 311 ? PHE A 318 ? GLN A 312 PHE A 319 AA2 3 ASN A 285 ? GLY A 291 ? ASN A 286 GLY A 292 AA2 4 ALA A 364 ? CYS A 369 ? ALA A 365 CYS A 370 AA2 5 GLU A 390 ? GLU A 394 ? GLU A 391 GLU A 395 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O HIS A 232 ? O HIS A 233 N LEU A 220 ? N LEU A 221 AA1 2 3 N PHE A 223 ? N PHE A 224 O LYS A 267 ? O LYS A 268 AA1 3 4 O VAL A 268 ? O VAL A 269 N GLY A 187 ? N GLY A 188 AA1 4 5 N LYS A 193 ? N LYS A 194 O GLU A 201 ? O GLU A 202 AA1 5 6 N ILE A 202 ? N ILE A 203 O PHE A 246 ? O PHE A 247 AA2 1 2 O GLU A 341 ? O GLU A 342 N PHE A 314 ? N PHE A 315 AA2 2 3 O TYR A 315 ? O TYR A 316 N TRP A 288 ? N TRP A 289 AA2 3 4 N VAL A 287 ? N VAL A 288 O THR A 365 ? O THR A 366 AA2 4 5 N VAL A 366 ? N VAL A 367 O ILE A 392 ? O ILE A 393 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 31 ? ? -58.70 -6.03 2 1 HIS A 60 ? ? 69.52 -63.76 3 1 TYR A 115 ? ? -93.79 55.42 4 1 PHE A 184 ? ? -116.76 69.69 5 1 ASP A 199 ? ? -140.58 12.53 6 1 ASP A 272 ? ? -93.53 -62.36 7 1 ARG A 273 ? ? -170.65 -176.56 # _pdbx_entry_details.entry_id 8QT6 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification ? # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8QT6 _em_3d_fitting.method ? _em_3d_fitting.target_criteria 'Cross-correlation coefficient' _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol 'RIGID BODY FIT' # _em_3d_fitting_list.id 1 _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.pdb_entry_id . _em_3d_fitting_list.pdb_chain_id . _em_3d_fitting_list.pdb_chain_residue_range . _em_3d_fitting_list.details ? _em_3d_fitting_list.chain_id A _em_3d_fitting_list.chain_residue_range 1-400 _em_3d_fitting_list.source_name AlphaFold _em_3d_fitting_list.type 'in silico model' _em_3d_fitting_list.accession_code Q8CZ28 _em_3d_fitting_list.initial_refinement_model_id 1 # _em_3d_reconstruction.entry_id 8QT6 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm 'FOURIER SPACE' _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details 'Final refinement was local refinement in cryoSPARC 4.0 using a mask that excludes the detergent micelle.' _em_3d_reconstruction.resolution 2.29 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 397972 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.5 # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.name _em_entity_assembly.details _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details _em_entity_assembly.entity_id_list 1 0 RECOMBINANT COMPLEX 'Streptococcus pneumoniae NADPH oxidase with FAD and heme cofactors' ? ? ? 1 2 1 RECOMBINANT COMPLEX 'Streptococcus pneumoniae NADPH oxidase' ? ? ? 1 # _em_image_scans.entry_id 8QT6 _em_image_scans.id 1 _em_image_scans.number_digital_images ? _em_image_scans.details ? _em_image_scans.scanner_model ? _em_image_scans.sampling_size ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.citation_id ? _em_image_scans.dimension_height 4096 _em_image_scans.dimension_width 4096 _em_image_scans.frames_per_image ? _em_image_scans.image_recording_id 1 _em_image_scans.used_frames_per_image ? # _em_imaging.entry_id 8QT6 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 700 _em_imaging.nominal_defocus_max 2100 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification 215000 _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure 'COMA FREE' _em_imaging.c2_aperture_diameter 50 _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material GOLD _em_sample_support.grid_mesh_size 400 _em_sample_support.grid_type 'UltrAuFoil R1.2/1.3' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 8QT6 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 277 _em_vitrification.instrument 'FEI VITROBOT MARK III' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8QT6 _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 FAD PA P N R 88 FAD O1A O N N 89 FAD O2A O N N 90 FAD O5B O N N 91 FAD C5B C N N 92 FAD C4B C N R 93 FAD O4B O N N 94 FAD C3B C N S 95 FAD O3B O N N 96 FAD C2B C N R 97 FAD O2B O N N 98 FAD C1B C N R 99 FAD N9A N Y N 100 FAD C8A C Y N 101 FAD N7A N Y N 102 FAD C5A C Y N 103 FAD C6A C Y N 104 FAD N6A N N N 105 FAD N1A N Y N 106 FAD C2A C Y N 107 FAD N3A N Y N 108 FAD C4A C Y N 109 FAD N1 N N N 110 FAD C2 C N N 111 FAD O2 O N N 112 FAD N3 N N N 113 FAD C4 C N N 114 FAD O4 O N N 115 FAD C4X C N N 116 FAD N5 N N N 117 FAD C5X C Y N 118 FAD C6 C Y N 119 FAD C7 C Y N 120 FAD C7M C N N 121 FAD C8 C Y N 122 FAD C8M C N N 123 FAD C9 C Y N 124 FAD C9A C Y N 125 FAD N10 N N N 126 FAD C10 C N N 127 FAD "C1'" C N N 128 FAD "C2'" C N S 129 FAD "O2'" O N N 130 FAD "C3'" C N S 131 FAD "O3'" O N N 132 FAD "C4'" C N R 133 FAD "O4'" O N N 134 FAD "C5'" C N N 135 FAD "O5'" O N N 136 FAD P P N R 137 FAD O1P O N N 138 FAD O2P O N N 139 FAD O3P O N N 140 FAD HOA2 H N N 141 FAD H51A H N N 142 FAD H52A H N N 143 FAD H4B H N N 144 FAD H3B H N N 145 FAD HO3A H N N 146 FAD H2B H N N 147 FAD HO2A H N N 148 FAD H1B H N N 149 FAD H8A H N N 150 FAD H61A H N N 151 FAD H62A H N N 152 FAD H2A H N N 153 FAD HN3 H N N 154 FAD H6 H N N 155 FAD HM71 H N N 156 FAD HM72 H N N 157 FAD HM73 H N N 158 FAD HM81 H N N 159 FAD HM82 H N N 160 FAD HM83 H N N 161 FAD H9 H N N 162 FAD "H1'1" H N N 163 FAD "H1'2" H N N 164 FAD "H2'" H N N 165 FAD "HO2'" H N N 166 FAD "H3'" H N N 167 FAD "HO3'" H N N 168 FAD "H4'" H N N 169 FAD "HO4'" H N N 170 FAD "H5'1" H N N 171 FAD "H5'2" H N N 172 FAD HOP2 H N N 173 GLN N N N N 174 GLN CA C N S 175 GLN C C N N 176 GLN O O N N 177 GLN CB C N N 178 GLN CG C N N 179 GLN CD C N N 180 GLN OE1 O N N 181 GLN NE2 N N N 182 GLN OXT O N N 183 GLN H H N N 184 GLN H2 H N N 185 GLN HA H N N 186 GLN HB2 H N N 187 GLN HB3 H N N 188 GLN HG2 H N N 189 GLN HG3 H N N 190 GLN HE21 H N N 191 GLN HE22 H N N 192 GLN HXT H N N 193 GLU N N N N 194 GLU CA C N S 195 GLU C C N N 196 GLU O O N N 197 GLU CB C N N 198 GLU CG C N N 199 GLU CD C N N 200 GLU OE1 O N N 201 GLU OE2 O N N 202 GLU OXT O N N 203 GLU H H N N 204 GLU H2 H N N 205 GLU HA H N N 206 GLU HB2 H N N 207 GLU HB3 H N N 208 GLU HG2 H N N 209 GLU HG3 H N N 210 GLU HE2 H N N 211 GLU HXT H N N 212 GLY N N N N 213 GLY CA C N N 214 GLY C C N N 215 GLY O O N N 216 GLY OXT O N N 217 GLY H H N N 218 GLY H2 H N N 219 GLY HA2 H N N 220 GLY HA3 H N N 221 GLY HXT H N N 222 HEM CHA C N N 223 HEM CHB C N N 224 HEM CHC C N N 225 HEM CHD C N N 226 HEM C1A C Y N 227 HEM C2A C Y N 228 HEM C3A C Y N 229 HEM C4A C Y N 230 HEM CMA C N N 231 HEM CAA C N N 232 HEM CBA C N N 233 HEM CGA C N N 234 HEM O1A O N N 235 HEM O2A O N N 236 HEM C1B C N N 237 HEM C2B C N N 238 HEM C3B C N N 239 HEM C4B C N N 240 HEM CMB C N N 241 HEM CAB C N N 242 HEM CBB C N N 243 HEM C1C C Y N 244 HEM C2C C Y N 245 HEM C3C C Y N 246 HEM C4C C Y N 247 HEM CMC C N N 248 HEM CAC C N N 249 HEM CBC C N N 250 HEM C1D C N N 251 HEM C2D C N N 252 HEM C3D C N N 253 HEM C4D C N N 254 HEM CMD C N N 255 HEM CAD C N N 256 HEM CBD C N N 257 HEM CGD C N N 258 HEM O1D O N N 259 HEM O2D O N N 260 HEM NA N Y N 261 HEM NB N N N 262 HEM NC N Y N 263 HEM ND N N N 264 HEM FE FE N N 265 HEM HHB H N N 266 HEM HHC H N N 267 HEM HHD H N N 268 HEM HMA H N N 269 HEM HMAA H N N 270 HEM HMAB H N N 271 HEM HAA H N N 272 HEM HAAA H N N 273 HEM HBA H N N 274 HEM HBAA H N N 275 HEM HMB H N N 276 HEM HMBA H N N 277 HEM HMBB H N N 278 HEM HAB H N N 279 HEM HBB H N N 280 HEM HBBA H N N 281 HEM HMC H N N 282 HEM HMCA H N N 283 HEM HMCB H N N 284 HEM HAC H N N 285 HEM HBC H N N 286 HEM HBCA H N N 287 HEM HMD H N N 288 HEM HMDA H N N 289 HEM HMDB H N N 290 HEM HAD H N N 291 HEM HADA H N N 292 HEM HBD H N N 293 HEM HBDA H N N 294 HEM H2A H N N 295 HEM H2D H N N 296 HEM HHA H N N 297 HIS N N N N 298 HIS CA C N S 299 HIS C C N N 300 HIS O O N N 301 HIS CB C N N 302 HIS CG C Y N 303 HIS ND1 N Y N 304 HIS CD2 C Y N 305 HIS CE1 C Y N 306 HIS NE2 N Y N 307 HIS OXT O N N 308 HIS H H N N 309 HIS H2 H N N 310 HIS HA H N N 311 HIS HB2 H N N 312 HIS HB3 H N N 313 HIS HD1 H N N 314 HIS HD2 H N N 315 HIS HE1 H N N 316 HIS HE2 H N N 317 HIS HXT H N N 318 HOH O O N N 319 HOH H1 H N N 320 HOH H2 H N N 321 ILE N N N N 322 ILE CA C N S 323 ILE C C N N 324 ILE O O N N 325 ILE CB C N S 326 ILE CG1 C N N 327 ILE CG2 C N N 328 ILE CD1 C N N 329 ILE OXT O N N 330 ILE H H N N 331 ILE H2 H N N 332 ILE HA H N N 333 ILE HB H N N 334 ILE HG12 H N N 335 ILE HG13 H N N 336 ILE HG21 H N N 337 ILE HG22 H N N 338 ILE HG23 H N N 339 ILE HD11 H N N 340 ILE HD12 H N N 341 ILE HD13 H N N 342 ILE HXT H N N 343 LEU N N N N 344 LEU CA C N S 345 LEU C C N N 346 LEU O O N N 347 LEU CB C N N 348 LEU CG C N N 349 LEU CD1 C N N 350 LEU CD2 C N N 351 LEU OXT O N N 352 LEU H H N N 353 LEU H2 H N N 354 LEU HA H N N 355 LEU HB2 H N N 356 LEU HB3 H N N 357 LEU HG H N N 358 LEU HD11 H N N 359 LEU HD12 H N N 360 LEU HD13 H N N 361 LEU HD21 H N N 362 LEU HD22 H N N 363 LEU HD23 H N N 364 LEU HXT H N N 365 LYS N N N N 366 LYS CA C N S 367 LYS C C N N 368 LYS O O N N 369 LYS CB C N N 370 LYS CG C N N 371 LYS CD C N N 372 LYS CE C N N 373 LYS NZ N N N 374 LYS OXT O N N 375 LYS H H N N 376 LYS H2 H N N 377 LYS HA H N N 378 LYS HB2 H N N 379 LYS HB3 H N N 380 LYS HG2 H N N 381 LYS HG3 H N N 382 LYS HD2 H N N 383 LYS HD3 H N N 384 LYS HE2 H N N 385 LYS HE3 H N N 386 LYS HZ1 H N N 387 LYS HZ2 H N N 388 LYS HZ3 H N N 389 LYS HXT H N N 390 MET N N N N 391 MET CA C N S 392 MET C C N N 393 MET O O N N 394 MET CB C N N 395 MET CG C N N 396 MET SD S N N 397 MET CE C N N 398 MET OXT O N N 399 MET H H N N 400 MET H2 H N N 401 MET HA H N N 402 MET HB2 H N N 403 MET HB3 H N N 404 MET HG2 H N N 405 MET HG3 H N N 406 MET HE1 H N N 407 MET HE2 H N N 408 MET HE3 H N N 409 MET HXT H N N 410 PHE N N N N 411 PHE CA C N S 412 PHE C C N N 413 PHE O O N N 414 PHE CB C N N 415 PHE CG C Y N 416 PHE CD1 C Y N 417 PHE CD2 C Y N 418 PHE CE1 C Y N 419 PHE CE2 C Y N 420 PHE CZ C Y N 421 PHE OXT O N N 422 PHE H H N N 423 PHE H2 H N N 424 PHE HA H N N 425 PHE HB2 H N N 426 PHE HB3 H N N 427 PHE HD1 H N N 428 PHE HD2 H N N 429 PHE HE1 H N N 430 PHE HE2 H N N 431 PHE HZ H N N 432 PHE HXT H N N 433 PRO N N N N 434 PRO CA C N S 435 PRO C C N N 436 PRO O O N N 437 PRO CB C N N 438 PRO CG C N N 439 PRO CD C N N 440 PRO OXT O N N 441 PRO H H N N 442 PRO HA H N N 443 PRO HB2 H N N 444 PRO HB3 H N N 445 PRO HG2 H N N 446 PRO HG3 H N N 447 PRO HD2 H N N 448 PRO HD3 H N N 449 PRO HXT H N N 450 SER N N N N 451 SER CA C N S 452 SER C C N N 453 SER O O N N 454 SER CB C N N 455 SER OG O N N 456 SER OXT O N N 457 SER H H N N 458 SER H2 H N N 459 SER HA H N N 460 SER HB2 H N N 461 SER HB3 H N N 462 SER HG H N N 463 SER HXT H N N 464 THR N N N N 465 THR CA C N S 466 THR C C N N 467 THR O O N N 468 THR CB C N R 469 THR OG1 O N N 470 THR CG2 C N N 471 THR OXT O N N 472 THR H H N N 473 THR H2 H N N 474 THR HA H N N 475 THR HB H N N 476 THR HG1 H N N 477 THR HG21 H N N 478 THR HG22 H N N 479 THR HG23 H N N 480 THR HXT H N N 481 TRP N N N N 482 TRP CA C N S 483 TRP C C N N 484 TRP O O N N 485 TRP CB C N N 486 TRP CG C Y N 487 TRP CD1 C Y N 488 TRP CD2 C Y N 489 TRP NE1 N Y N 490 TRP CE2 C Y N 491 TRP CE3 C Y N 492 TRP CZ2 C Y N 493 TRP CZ3 C Y N 494 TRP CH2 C Y N 495 TRP OXT O N N 496 TRP H H N N 497 TRP H2 H N N 498 TRP HA H N N 499 TRP HB2 H N N 500 TRP HB3 H N N 501 TRP HD1 H N N 502 TRP HE1 H N N 503 TRP HE3 H N N 504 TRP HZ2 H N N 505 TRP HZ3 H N N 506 TRP HH2 H N N 507 TRP HXT H N N 508 TYR N N N N 509 TYR CA C N S 510 TYR C C N N 511 TYR O O N N 512 TYR CB C N N 513 TYR CG C Y N 514 TYR CD1 C Y N 515 TYR CD2 C Y N 516 TYR CE1 C Y N 517 TYR CE2 C Y N 518 TYR CZ C Y N 519 TYR OH O N N 520 TYR OXT O N N 521 TYR H H N N 522 TYR H2 H N N 523 TYR HA H N N 524 TYR HB2 H N N 525 TYR HB3 H N N 526 TYR HD1 H N N 527 TYR HD2 H N N 528 TYR HE1 H N N 529 TYR HE2 H N N 530 TYR HH H N N 531 TYR HXT H N N 532 VAL N N N N 533 VAL CA C N S 534 VAL C C N N 535 VAL O O N N 536 VAL CB C N N 537 VAL CG1 C N N 538 VAL CG2 C N N 539 VAL OXT O N N 540 VAL H H N N 541 VAL H2 H N N 542 VAL HA H N N 543 VAL HB H N N 544 VAL HG11 H N N 545 VAL HG12 H N N 546 VAL HG13 H N N 547 VAL HG21 H N N 548 VAL HG22 H N N 549 VAL HG23 H N N 550 VAL HXT H N N 551 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 FAD PA O1A doub N N 83 FAD PA O2A sing N N 84 FAD PA O5B sing N N 85 FAD PA O3P sing N N 86 FAD O2A HOA2 sing N N 87 FAD O5B C5B sing N N 88 FAD C5B C4B sing N N 89 FAD C5B H51A sing N N 90 FAD C5B H52A sing N N 91 FAD C4B O4B sing N N 92 FAD C4B C3B sing N N 93 FAD C4B H4B sing N N 94 FAD O4B C1B sing N N 95 FAD C3B O3B sing N N 96 FAD C3B C2B sing N N 97 FAD C3B H3B sing N N 98 FAD O3B HO3A sing N N 99 FAD C2B O2B sing N N 100 FAD C2B C1B sing N N 101 FAD C2B H2B sing N N 102 FAD O2B HO2A sing N N 103 FAD C1B N9A sing N N 104 FAD C1B H1B sing N N 105 FAD N9A C8A sing Y N 106 FAD N9A C4A sing Y N 107 FAD C8A N7A doub Y N 108 FAD C8A H8A sing N N 109 FAD N7A C5A sing Y N 110 FAD C5A C6A sing Y N 111 FAD C5A C4A doub Y N 112 FAD C6A N6A sing N N 113 FAD C6A N1A doub Y N 114 FAD N6A H61A sing N N 115 FAD N6A H62A sing N N 116 FAD N1A C2A sing Y N 117 FAD C2A N3A doub Y N 118 FAD C2A H2A sing N N 119 FAD N3A C4A sing Y N 120 FAD N1 C2 sing N N 121 FAD N1 C10 doub N N 122 FAD C2 O2 doub N N 123 FAD C2 N3 sing N N 124 FAD N3 C4 sing N N 125 FAD N3 HN3 sing N N 126 FAD C4 O4 doub N N 127 FAD C4 C4X sing N N 128 FAD C4X N5 doub N N 129 FAD C4X C10 sing N N 130 FAD N5 C5X sing N N 131 FAD C5X C6 doub Y N 132 FAD C5X C9A sing Y N 133 FAD C6 C7 sing Y N 134 FAD C6 H6 sing N N 135 FAD C7 C7M sing N N 136 FAD C7 C8 doub Y N 137 FAD C7M HM71 sing N N 138 FAD C7M HM72 sing N N 139 FAD C7M HM73 sing N N 140 FAD C8 C8M sing N N 141 FAD C8 C9 sing Y N 142 FAD C8M HM81 sing N N 143 FAD C8M HM82 sing N N 144 FAD C8M HM83 sing N N 145 FAD C9 C9A doub Y N 146 FAD C9 H9 sing N N 147 FAD C9A N10 sing N N 148 FAD N10 C10 sing N N 149 FAD N10 "C1'" sing N N 150 FAD "C1'" "C2'" sing N N 151 FAD "C1'" "H1'1" sing N N 152 FAD "C1'" "H1'2" sing N N 153 FAD "C2'" "O2'" sing N N 154 FAD "C2'" "C3'" sing N N 155 FAD "C2'" "H2'" sing N N 156 FAD "O2'" "HO2'" sing N N 157 FAD "C3'" "O3'" sing N N 158 FAD "C3'" "C4'" sing N N 159 FAD "C3'" "H3'" sing N N 160 FAD "O3'" "HO3'" sing N N 161 FAD "C4'" "O4'" sing N N 162 FAD "C4'" "C5'" sing N N 163 FAD "C4'" "H4'" sing N N 164 FAD "O4'" "HO4'" sing N N 165 FAD "C5'" "O5'" sing N N 166 FAD "C5'" "H5'1" sing N N 167 FAD "C5'" "H5'2" sing N N 168 FAD "O5'" P sing N N 169 FAD P O1P doub N N 170 FAD P O2P sing N N 171 FAD P O3P sing N N 172 FAD O2P HOP2 sing N N 173 GLN N CA sing N N 174 GLN N H sing N N 175 GLN N H2 sing N N 176 GLN CA C sing N N 177 GLN CA CB sing N N 178 GLN CA HA sing N N 179 GLN C O doub N N 180 GLN C OXT sing N N 181 GLN CB CG sing N N 182 GLN CB HB2 sing N N 183 GLN CB HB3 sing N N 184 GLN CG CD sing N N 185 GLN CG HG2 sing N N 186 GLN CG HG3 sing N N 187 GLN CD OE1 doub N N 188 GLN CD NE2 sing N N 189 GLN NE2 HE21 sing N N 190 GLN NE2 HE22 sing N N 191 GLN OXT HXT sing N N 192 GLU N CA sing N N 193 GLU N H sing N N 194 GLU N H2 sing N N 195 GLU CA C sing N N 196 GLU CA CB sing N N 197 GLU CA HA sing N N 198 GLU C O doub N N 199 GLU C OXT sing N N 200 GLU CB CG sing N N 201 GLU CB HB2 sing N N 202 GLU CB HB3 sing N N 203 GLU CG CD sing N N 204 GLU CG HG2 sing N N 205 GLU CG HG3 sing N N 206 GLU CD OE1 doub N N 207 GLU CD OE2 sing N N 208 GLU OE2 HE2 sing N N 209 GLU OXT HXT sing N N 210 GLY N CA sing N N 211 GLY N H sing N N 212 GLY N H2 sing N N 213 GLY CA C sing N N 214 GLY CA HA2 sing N N 215 GLY CA HA3 sing N N 216 GLY C O doub N N 217 GLY C OXT sing N N 218 GLY OXT HXT sing N N 219 HEM CHA C1A sing N N 220 HEM CHA C4D doub N N 221 HEM CHA HHA sing N N 222 HEM CHB C4A sing N N 223 HEM CHB C1B doub N N 224 HEM CHB HHB sing N N 225 HEM CHC C4B sing N N 226 HEM CHC C1C doub N N 227 HEM CHC HHC sing N N 228 HEM CHD C4C doub N N 229 HEM CHD C1D sing N N 230 HEM CHD HHD sing N N 231 HEM C1A C2A doub Y N 232 HEM C1A NA sing Y N 233 HEM C2A C3A sing Y N 234 HEM C2A CAA sing N N 235 HEM C3A C4A doub Y N 236 HEM C3A CMA sing N N 237 HEM C4A NA sing Y N 238 HEM CMA HMA sing N N 239 HEM CMA HMAA sing N N 240 HEM CMA HMAB sing N N 241 HEM CAA CBA sing N N 242 HEM CAA HAA sing N N 243 HEM CAA HAAA sing N N 244 HEM CBA CGA sing N N 245 HEM CBA HBA sing N N 246 HEM CBA HBAA sing N N 247 HEM CGA O1A doub N N 248 HEM CGA O2A sing N N 249 HEM C1B C2B sing N N 250 HEM C1B NB sing N N 251 HEM C2B C3B doub N N 252 HEM C2B CMB sing N N 253 HEM C3B C4B sing N N 254 HEM C3B CAB sing N N 255 HEM C4B NB doub N N 256 HEM CMB HMB sing N N 257 HEM CMB HMBA sing N N 258 HEM CMB HMBB sing N N 259 HEM CAB CBB doub N N 260 HEM CAB HAB sing N N 261 HEM CBB HBB sing N N 262 HEM CBB HBBA sing N N 263 HEM C1C C2C sing Y N 264 HEM C1C NC sing Y N 265 HEM C2C C3C doub Y N 266 HEM C2C CMC sing N N 267 HEM C3C C4C sing Y N 268 HEM C3C CAC sing N N 269 HEM C4C NC sing Y N 270 HEM CMC HMC sing N N 271 HEM CMC HMCA sing N N 272 HEM CMC HMCB sing N N 273 HEM CAC CBC doub N N 274 HEM CAC HAC sing N N 275 HEM CBC HBC sing N N 276 HEM CBC HBCA sing N N 277 HEM C1D C2D sing N N 278 HEM C1D ND doub N N 279 HEM C2D C3D doub N N 280 HEM C2D CMD sing N N 281 HEM C3D C4D sing N N 282 HEM C3D CAD sing N N 283 HEM C4D ND sing N N 284 HEM CMD HMD sing N N 285 HEM CMD HMDA sing N N 286 HEM CMD HMDB sing N N 287 HEM CAD CBD sing N N 288 HEM CAD HAD sing N N 289 HEM CAD HADA sing N N 290 HEM CBD CGD sing N N 291 HEM CBD HBD sing N N 292 HEM CBD HBDA sing N N 293 HEM CGD O1D doub N N 294 HEM CGD O2D sing N N 295 HEM O2A H2A sing N N 296 HEM O2D H2D sing N N 297 HEM FE NA sing N N 298 HEM FE NB sing N N 299 HEM FE NC sing N N 300 HEM FE ND sing N N 301 HIS N CA sing N N 302 HIS N H sing N N 303 HIS N H2 sing N N 304 HIS CA C sing N N 305 HIS CA CB sing N N 306 HIS CA HA sing N N 307 HIS C O doub N N 308 HIS C OXT sing N N 309 HIS CB CG sing N N 310 HIS CB HB2 sing N N 311 HIS CB HB3 sing N N 312 HIS CG ND1 sing Y N 313 HIS CG CD2 doub Y N 314 HIS ND1 CE1 doub Y N 315 HIS ND1 HD1 sing N N 316 HIS CD2 NE2 sing Y N 317 HIS CD2 HD2 sing N N 318 HIS CE1 NE2 sing Y N 319 HIS CE1 HE1 sing N N 320 HIS NE2 HE2 sing N N 321 HIS OXT HXT sing N N 322 HOH O H1 sing N N 323 HOH O H2 sing N N 324 ILE N CA sing N N 325 ILE N H sing N N 326 ILE N H2 sing N N 327 ILE CA C sing N N 328 ILE CA CB sing N N 329 ILE CA HA sing N N 330 ILE C O doub N N 331 ILE C OXT sing N N 332 ILE CB CG1 sing N N 333 ILE CB CG2 sing N N 334 ILE CB HB sing N N 335 ILE CG1 CD1 sing N N 336 ILE CG1 HG12 sing N N 337 ILE CG1 HG13 sing N N 338 ILE CG2 HG21 sing N N 339 ILE CG2 HG22 sing N N 340 ILE CG2 HG23 sing N N 341 ILE CD1 HD11 sing N N 342 ILE CD1 HD12 sing N N 343 ILE CD1 HD13 sing N N 344 ILE OXT HXT sing N N 345 LEU N CA sing N N 346 LEU N H sing N N 347 LEU N H2 sing N N 348 LEU CA C sing N N 349 LEU CA CB sing N N 350 LEU CA HA sing N N 351 LEU C O doub N N 352 LEU C OXT sing N N 353 LEU CB CG sing N N 354 LEU CB HB2 sing N N 355 LEU CB HB3 sing N N 356 LEU CG CD1 sing N N 357 LEU CG CD2 sing N N 358 LEU CG HG sing N N 359 LEU CD1 HD11 sing N N 360 LEU CD1 HD12 sing N N 361 LEU CD1 HD13 sing N N 362 LEU CD2 HD21 sing N N 363 LEU CD2 HD22 sing N N 364 LEU CD2 HD23 sing N N 365 LEU OXT HXT sing N N 366 LYS N CA sing N N 367 LYS N H sing N N 368 LYS N H2 sing N N 369 LYS CA C sing N N 370 LYS CA CB sing N N 371 LYS CA HA sing N N 372 LYS C O doub N N 373 LYS C OXT sing N N 374 LYS CB CG sing N N 375 LYS CB HB2 sing N N 376 LYS CB HB3 sing N N 377 LYS CG CD sing N N 378 LYS CG HG2 sing N N 379 LYS CG HG3 sing N N 380 LYS CD CE sing N N 381 LYS CD HD2 sing N N 382 LYS CD HD3 sing N N 383 LYS CE NZ sing N N 384 LYS CE HE2 sing N N 385 LYS CE HE3 sing N N 386 LYS NZ HZ1 sing N N 387 LYS NZ HZ2 sing N N 388 LYS NZ HZ3 sing N N 389 LYS OXT HXT sing N N 390 MET N CA sing N N 391 MET N H sing N N 392 MET N H2 sing N N 393 MET CA C sing N N 394 MET CA CB sing N N 395 MET CA HA sing N N 396 MET C O doub N N 397 MET C OXT sing N N 398 MET CB CG sing N N 399 MET CB HB2 sing N N 400 MET CB HB3 sing N N 401 MET CG SD sing N N 402 MET CG HG2 sing N N 403 MET CG HG3 sing N N 404 MET SD CE sing N N 405 MET CE HE1 sing N N 406 MET CE HE2 sing N N 407 MET CE HE3 sing N N 408 MET OXT HXT sing N N 409 PHE N CA sing N N 410 PHE N H sing N N 411 PHE N H2 sing N N 412 PHE CA C sing N N 413 PHE CA CB sing N N 414 PHE CA HA sing N N 415 PHE C O doub N N 416 PHE C OXT sing N N 417 PHE CB CG sing N N 418 PHE CB HB2 sing N N 419 PHE CB HB3 sing N N 420 PHE CG CD1 doub Y N 421 PHE CG CD2 sing Y N 422 PHE CD1 CE1 sing Y N 423 PHE CD1 HD1 sing N N 424 PHE CD2 CE2 doub Y N 425 PHE CD2 HD2 sing N N 426 PHE CE1 CZ doub Y N 427 PHE CE1 HE1 sing N N 428 PHE CE2 CZ sing Y N 429 PHE CE2 HE2 sing N N 430 PHE CZ HZ sing N N 431 PHE OXT HXT sing N N 432 PRO N CA sing N N 433 PRO N CD sing N N 434 PRO N H sing N N 435 PRO CA C sing N N 436 PRO CA CB sing N N 437 PRO CA HA sing N N 438 PRO C O doub N N 439 PRO C OXT sing N N 440 PRO CB CG sing N N 441 PRO CB HB2 sing N N 442 PRO CB HB3 sing N N 443 PRO CG CD sing N N 444 PRO CG HG2 sing N N 445 PRO CG HG3 sing N N 446 PRO CD HD2 sing N N 447 PRO CD HD3 sing N N 448 PRO OXT HXT sing N N 449 SER N CA sing N N 450 SER N H sing N N 451 SER N H2 sing N N 452 SER CA C sing N N 453 SER CA CB sing N N 454 SER CA HA sing N N 455 SER C O doub N N 456 SER C OXT sing N N 457 SER CB OG sing N N 458 SER CB HB2 sing N N 459 SER CB HB3 sing N N 460 SER OG HG sing N N 461 SER OXT HXT sing N N 462 THR N CA sing N N 463 THR N H sing N N 464 THR N H2 sing N N 465 THR CA C sing N N 466 THR CA CB sing N N 467 THR CA HA sing N N 468 THR C O doub N N 469 THR C OXT sing N N 470 THR CB OG1 sing N N 471 THR CB CG2 sing N N 472 THR CB HB sing N N 473 THR OG1 HG1 sing N N 474 THR CG2 HG21 sing N N 475 THR CG2 HG22 sing N N 476 THR CG2 HG23 sing N N 477 THR OXT HXT sing N N 478 TRP N CA sing N N 479 TRP N H sing N N 480 TRP N H2 sing N N 481 TRP CA C sing N N 482 TRP CA CB sing N N 483 TRP CA HA sing N N 484 TRP C O doub N N 485 TRP C OXT sing N N 486 TRP CB CG sing N N 487 TRP CB HB2 sing N N 488 TRP CB HB3 sing N N 489 TRP CG CD1 doub Y N 490 TRP CG CD2 sing Y N 491 TRP CD1 NE1 sing Y N 492 TRP CD1 HD1 sing N N 493 TRP CD2 CE2 doub Y N 494 TRP CD2 CE3 sing Y N 495 TRP NE1 CE2 sing Y N 496 TRP NE1 HE1 sing N N 497 TRP CE2 CZ2 sing Y N 498 TRP CE3 CZ3 doub Y N 499 TRP CE3 HE3 sing N N 500 TRP CZ2 CH2 doub Y N 501 TRP CZ2 HZ2 sing N N 502 TRP CZ3 CH2 sing Y N 503 TRP CZ3 HZ3 sing N N 504 TRP CH2 HH2 sing N N 505 TRP OXT HXT sing N N 506 TYR N CA sing N N 507 TYR N H sing N N 508 TYR N H2 sing N N 509 TYR CA C sing N N 510 TYR CA CB sing N N 511 TYR CA HA sing N N 512 TYR C O doub N N 513 TYR C OXT sing N N 514 TYR CB CG sing N N 515 TYR CB HB2 sing N N 516 TYR CB HB3 sing N N 517 TYR CG CD1 doub Y N 518 TYR CG CD2 sing Y N 519 TYR CD1 CE1 sing Y N 520 TYR CD1 HD1 sing N N 521 TYR CD2 CE2 doub Y N 522 TYR CD2 HD2 sing N N 523 TYR CE1 CZ doub Y N 524 TYR CE1 HE1 sing N N 525 TYR CE2 CZ sing Y N 526 TYR CE2 HE2 sing N N 527 TYR CZ OH sing N N 528 TYR OH HH sing N N 529 TYR OXT HXT sing N N 530 VAL N CA sing N N 531 VAL N H sing N N 532 VAL N H2 sing N N 533 VAL CA C sing N N 534 VAL CA CB sing N N 535 VAL CA HA sing N N 536 VAL C O doub N N 537 VAL C OXT sing N N 538 VAL CB CG1 sing N N 539 VAL CB CG2 sing N N 540 VAL CB HB sing N N 541 VAL CG1 HG11 sing N N 542 VAL CG1 HG12 sing N N 543 VAL CG1 HG13 sing N N 544 VAL CG2 HG21 sing N N 545 VAL CG2 HG22 sing N N 546 VAL CG2 HG23 sing N N 547 VAL OXT HXT sing N N 548 # _em_admin.current_status REL _em_admin.deposition_date 2023-10-12 _em_admin.deposition_site PDBE _em_admin.entry_id 8QT6 _em_admin.last_update 2024-07-31 _em_admin.map_release_date 2024-07-24 _em_admin.title 'Cryo-EM structure of Streptococcus pneumoniae NADPH oxidase' # loop_ _em_buffer_component.buffer_id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.id _em_buffer_component.name 1 250 mM NaCl 1 'sodium chloride' 1 50 mM Tris-HCl 2 Tris-HCl 1 0.002 % LMNG 3 'Lauryl Maltose Neopentyl Glycol' 1 1 mM FAD 4 'flavin-adenine dinucleotide' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # loop_ _em_entity_assembly_molwt.entity_assembly_id _em_entity_assembly_molwt.experimental_flag _em_entity_assembly_molwt.id _em_entity_assembly_molwt.units _em_entity_assembly_molwt.value 1 NO 1 MEGADALTONS 0.046 1 NO 2 MEGADALTONS 0.046 # loop_ _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue _em_entity_assembly_naturalsource.details ? ? 1 2 1313 'Streptococcus pneumoniae' ? ? ? ? ? ? ? 2 3 1313 'Streptococcus pneumoniae' ? ? ? ? ? # loop_ _em_entity_assembly_recombinant.cell _em_entity_assembly_recombinant.entity_assembly_id _em_entity_assembly_recombinant.id _em_entity_assembly_recombinant.ncbi_tax_id _em_entity_assembly_recombinant.organism _em_entity_assembly_recombinant.plasmid _em_entity_assembly_recombinant.strain ? 1 2 469008 'Escherichia coli BL21(DE3)' ? C41 ? 2 3 469008 'Escherichia coli BL21(DE3)' ? C41 # _em_image_processing.details 'Movies were collected in EER format and not gain corrected' _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time 3.96 _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 70 _em_image_recording.details 'Movies were collected in EER format.' _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'FEI FALCON IV (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images 18433 # _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_slit_width 10 _em_imaging_optics.energyfilter_name 'TFS Selectris X' _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? _em_imaging_optics.details ? # _em_particle_selection.details 'These are the combined particles from two different Topaz models and a crYOLO model and contains duplicate particles.' _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 8765912 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? crYOLO ? 'PARTICLE SELECTION' ? 2 1 ? ? Topaz ? 'IMAGE ACQUISITION' ? 3 ? ? 1 EPU ? MASKING ? 4 ? ? ? ? ? 'CTF CORRECTION' ? 5 1 ? ? RELION ? 'LAYERLINE INDEXING' ? 6 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 7 ? ? ? ? ? 'MODEL FITTING' ? 8 ? 1 ? 'UCSF ChimeraX' ? OTHER ? 9 ? ? ? ? ? 'MODEL REFINEMENT' ? 10 ? 1 ? PHENIX ? 'MODEL REFINEMENT' ? 11 ? 1 ? Coot ? 'INITIAL EULER ASSIGNMENT' ? 12 1 ? ? cryoSPARC ? 'FINAL EULER ASSIGNMENT' ? 13 1 ? ? cryoSPARC ? CLASSIFICATION ? 14 1 ? ? cryoSPARC ? RECONSTRUCTION ? 15 1 ? ? cryoSPARC ? # _em_specimen.concentration 6 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Max Planck Society' _pdbx_audit_support.country Germany _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 FAD ? ? FAD ? ? 'SUBJECT OF INVESTIGATION' ? 2 HEM ? ? HEM ? ? 'SUBJECT OF INVESTIGATION' ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name AlphaFold _pdbx_initial_refinement_model.accession_code Q8CZ28 _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 8QT6 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C FE H N O P S # loop_