data_8R4E # _entry.id 8R4E # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.384 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8R4E pdb_00008r4e 10.2210/pdb8r4e/pdb WWPDB D_1292134613 ? ? BMRB 34876 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-12-27 2 'Structure model' 1 1 2024-01-10 3 'Structure model' 1 2 2024-01-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_DOI' 2 2 'Structure model' '_citation.pdbx_database_id_PubMed' 3 2 'Structure model' '_citation.title' 4 2 'Structure model' '_citation.year' 5 2 'Structure model' '_citation_author.identifier_ORCID' 6 3 'Structure model' '_citation.journal_volume' 7 3 'Structure model' '_citation.page_first' 8 3 'Structure model' '_citation.page_last' 9 3 'Structure model' '_citation.year' 10 3 'Structure model' '_citation_author.identifier_ORCID' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr . _pdbx_database_status.entry_id 8R4E _pdbx_database_status.recvd_initial_deposition_date 2023-11-13 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs . _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Hybrid-1R G-quadruplex with a +(lpp) loop progression' _pdbx_database_related.db_id 34876 _pdbx_database_related.content_type unspecified # _pdbx_contact_author.id 2 _pdbx_contact_author.email weisz@uni-greifswald.de _pdbx_contact_author.name_first Klaus _pdbx_contact_author.name_last Weisz _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-2736-6606 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Jana, J.' 1 0000-0002-8696-0939 'Vianney, Y.M.' 2 0000-0002-4576-9935 'Weisz, K.' 3 0000-0002-2736-6606 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Chem.Commun.(Camb.)' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1364-548X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 60 _citation.language ? _citation.page_first 854 _citation.page_last 857 _citation.title 'Impact of loop length and duplex extensions on the design of hybrid-type G-quadruplexes.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1039/d3cc05625b _citation.pdbx_database_id_PubMed 38131370 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jana, J.' 1 ? primary 'Vianney, Y.M.' 2 ? primary 'Weisz, K.' 3 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'DNA (27-MER)' _entity.formula_weight 8501.428 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;(DG)(DC)(DG)(DT)(DG)(DG)(DG)(DT)(DC)(DA)(DG)(DG)(DG)(DT)(DT)(DG)(DG)(DG)(DT)(DT) (DG)(DG)(DG)(DA)(DC)(DG)(DC) ; _entity_poly.pdbx_seq_one_letter_code_can GCGTGGGTCAGGGTTGGGTTGGGACGC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DC n 1 3 DG n 1 4 DT n 1 5 DG n 1 6 DG n 1 7 DG n 1 8 DT n 1 9 DC n 1 10 DA n 1 11 DG n 1 12 DG n 1 13 DG n 1 14 DT n 1 15 DT n 1 16 DG n 1 17 DG n 1 18 DG n 1 19 DT n 1 20 DT n 1 21 DG n 1 22 DG n 1 23 DG n 1 24 DA n 1 25 DC n 1 26 DG n 1 27 DC n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 27 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG DG A . n A 1 2 DC 2 2 2 DC DC A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 DT 4 4 4 DT DT A . n A 1 5 DG 5 5 5 DG DG A . n A 1 6 DG 6 6 6 DG DG A . n A 1 7 DG 7 7 7 DG DG A . n A 1 8 DT 8 8 8 DT DT A . n A 1 9 DC 9 9 9 DC DC A . n A 1 10 DA 10 10 10 DA DA A . n A 1 11 DG 11 11 11 DG DG A . n A 1 12 DG 12 12 12 DG DG A . n A 1 13 DG 13 13 13 DG DG A . n A 1 14 DT 14 14 14 DT DT A . n A 1 15 DT 15 15 15 DT DT A . n A 1 16 DG 16 16 16 DG DG A . n A 1 17 DG 17 17 17 DG DG A . n A 1 18 DG 18 18 18 DG DG A . n A 1 19 DT 19 19 19 DT DT A . n A 1 20 DT 20 20 20 DT DT A . n A 1 21 DG 21 21 21 DG DG A . n A 1 22 DG 22 22 22 DG DG A . n A 1 23 DG 23 23 23 DG DG A . n A 1 24 DA 24 24 24 DA DA A . n A 1 25 DC 25 25 25 DC DC A . n A 1 26 DG 26 26 26 DG DG A . n A 1 27 DC 27 27 27 DC DC A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8R4E _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 8R4E _struct.title 'Hybrid-1R G-quadruplex with a +(lpp) loop progression' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8R4E _struct_keywords.text '(3+1) hybrid topology, DNA, G-quadruplex, quadruplex-duplex hybrid' _struct_keywords.pdbx_keywords DNA # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8R4E _struct_ref.pdbx_db_accession 8R4E _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8R4E _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 27 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 8R4E _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 27 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 27 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'NMR Distance Restraints' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 A DC 27 N3 ? ? A DG 1 A DC 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DC 27 O2 ? ? A DG 1 A DC 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 A DC 27 N4 ? ? A DG 1 A DC 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 A DG 26 N1 ? ? A DC 2 A DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 A DG 26 O6 ? ? A DC 2 A DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 A DG 26 N2 ? ? A DC 2 A DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DC 25 N3 ? ? A DG 3 A DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DC 25 O2 ? ? A DG 3 A DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DC 25 N4 ? ? A DG 3 A DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 4 N3 ? ? ? 1_555 A DA 24 N1 ? ? A DT 4 A DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 4 O4 ? ? ? 1_555 A DA 24 N6 ? ? A DT 4 A DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A DG 13 O6 ? ? A DG 5 A DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A DG 13 N7 ? ? A DG 5 A DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? A DG 5 N7 ? ? ? 1_555 A DG 23 N2 ? ? A DG 5 A DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A DG 23 N1 ? ? A DG 5 A DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A DG 6 N1 ? ? ? 1_555 A DG 12 O6 ? ? A DG 6 A DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A DG 6 N2 ? ? ? 1_555 A DG 12 N7 ? ? A DG 6 A DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A DG 6 N7 ? ? ? 1_555 A DG 22 N2 ? ? A DG 6 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A DG 6 O6 ? ? ? 1_555 A DG 22 N1 ? ? A DG 6 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A DG 7 N7 ? ? ? 1_555 A DG 11 N2 ? ? A DG 7 A DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A DG 7 O6 ? ? ? 1_555 A DG 11 N1 ? ? A DG 7 A DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A DG 7 N1 ? ? ? 1_555 A DG 21 O6 ? ? A DG 7 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A DG 7 N2 ? ? ? 1_555 A DG 21 N7 ? ? A DG 7 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? A DC 9 N4 ? ? ? 1_555 A DG 21 N7 ? ? A DC 9 A DG 21 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog25 hydrog ? ? A DA 10 N6 ? ? ? 1_555 A DG 21 O6 ? ? A DA 10 A DG 21 1_555 ? ? ? ? ? ? 'DA-DG MISPAIR' ? ? ? hydrog26 hydrog ? ? A DG 11 N7 ? ? ? 1_555 A DG 16 N2 ? ? A DG 11 A DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog27 hydrog ? ? A DG 11 O6 ? ? ? 1_555 A DG 16 N1 ? ? A DG 11 A DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog28 hydrog ? ? A DG 12 N1 ? ? ? 1_555 A DG 17 O6 ? ? A DG 12 A DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog29 hydrog ? ? A DG 12 N2 ? ? ? 1_555 A DG 17 N7 ? ? A DG 12 A DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog30 hydrog ? ? A DG 13 N1 ? ? ? 1_555 A DG 18 O6 ? ? A DG 13 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog31 hydrog ? ? A DG 13 N2 ? ? ? 1_555 A DG 18 N7 ? ? A DG 13 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog32 hydrog ? ? A DG 16 N7 ? ? ? 1_555 A DG 21 N2 ? ? A DG 16 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog33 hydrog ? ? A DG 16 O6 ? ? ? 1_555 A DG 21 N1 ? ? A DG 16 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog34 hydrog ? ? A DG 17 N1 ? ? ? 1_555 A DG 22 O6 ? ? A DG 17 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog35 hydrog ? ? A DG 17 N2 ? ? ? 1_555 A DG 22 N7 ? ? A DG 17 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog36 hydrog ? ? A DG 18 N1 ? ? ? 1_555 A DG 23 O6 ? ? A DG 18 A DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog37 hydrog ? ? A DG 18 N2 ? ? ? 1_555 A DG 23 N7 ? ? A DG 18 A DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog38 hydrog ? ? A DT 19 O4 ? ? ? 1_555 A DG 21 N2 ? ? A DT 19 A DG 21 1_555 ? ? ? ? ? ? 'DT-DG MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C5 _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 DT _pdbx_validate_rmsd_bond.auth_seq_id_1 15 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 C7 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 DT _pdbx_validate_rmsd_bond.auth_seq_id_2 15 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.535 _pdbx_validate_rmsd_bond.bond_target_value 1.496 _pdbx_validate_rmsd_bond.bond_deviation 0.039 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.006 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 112.02 108.30 3.72 0.30 N 2 1 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 113.15 108.30 4.85 0.30 N 3 1 N1 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 122.77 118.90 3.87 0.60 N 4 1 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 116.21 121.90 -5.69 0.70 N 5 1 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 113.87 108.30 5.57 0.30 N 6 1 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 114.50 108.30 6.20 0.30 N 7 1 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.83 108.30 2.53 0.30 N 8 1 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 119.28 122.90 -3.62 0.60 N 9 1 N3 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 117.21 121.90 -4.69 0.70 N 10 1 C4 A DA 10 ? ? C5 A DA 10 ? ? C6 A DA 10 ? ? 113.54 117.00 -3.46 0.50 N 11 1 C5 A DA 10 ? ? C6 A DA 10 ? ? N1 A DA 10 ? ? 121.35 117.70 3.65 0.50 N 12 1 N1 A DA 10 ? ? C6 A DA 10 ? ? N6 A DA 10 ? ? 112.20 118.60 -6.40 0.60 N 13 1 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 112.38 108.30 4.08 0.30 N 14 1 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 110.32 108.30 2.02 0.30 N 15 1 "O4'" A DT 14 ? ? "C1'" A DT 14 ? ? N1 A DT 14 ? ? 114.31 108.30 6.01 0.30 N 16 1 N3 A DT 14 ? ? C2 A DT 14 ? ? O2 A DT 14 ? ? 118.65 122.30 -3.65 0.60 N 17 1 C6 A DT 14 ? ? C5 A DT 14 ? ? C7 A DT 14 ? ? 119.23 122.90 -3.67 0.60 N 18 1 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 112.51 108.30 4.21 0.30 N 19 1 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 114.63 108.30 6.33 0.30 N 20 1 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 111.43 108.30 3.13 0.30 N 21 1 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 110.46 108.30 2.16 0.30 N 22 1 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 111.34 108.30 3.04 0.30 N 23 1 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 113.06 108.30 4.76 0.30 N 24 1 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 111.61 108.30 3.31 0.30 N 25 1 C4 A DA 24 ? ? C5 A DA 24 ? ? C6 A DA 24 ? ? 113.67 117.00 -3.33 0.50 N 26 1 C5 A DA 24 ? ? C6 A DA 24 ? ? N1 A DA 24 ? ? 121.52 117.70 3.82 0.50 N 27 1 N1 A DA 24 ? ? C6 A DA 24 ? ? N6 A DA 24 ? ? 113.30 118.60 -5.30 0.60 N 28 1 N3 A DC 25 ? ? C2 A DC 25 ? ? O2 A DC 25 ? ? 116.48 121.90 -5.42 0.70 N 29 1 "O4'" A DG 26 ? ? "C1'" A DG 26 ? ? N9 A DG 26 ? ? 110.65 108.30 2.35 0.30 N 30 1 "O4'" A DC 27 ? ? "C1'" A DC 27 ? ? N1 A DC 27 ? ? 110.99 108.30 2.69 0.30 N 31 1 N3 A DC 27 ? ? C2 A DC 27 ? ? O2 A DC 27 ? ? 116.64 121.90 -5.26 0.70 N 32 2 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 112.42 108.30 4.12 0.30 N 33 2 N1 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 122.59 118.90 3.69 0.60 N 34 2 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 116.26 121.90 -5.64 0.70 N 35 2 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.27 122.90 -3.63 0.60 N 36 2 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 113.87 108.30 5.57 0.30 N 37 2 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 114.64 108.30 6.34 0.30 N 38 2 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.20 108.30 2.90 0.30 N 39 2 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 114.11 108.30 5.81 0.30 N 40 2 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 119.14 122.90 -3.76 0.60 N 41 2 N3 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 117.23 121.90 -4.67 0.70 N 42 2 C4 A DA 10 ? ? C5 A DA 10 ? ? C6 A DA 10 ? ? 113.56 117.00 -3.44 0.50 N 43 2 C5 A DA 10 ? ? C6 A DA 10 ? ? N1 A DA 10 ? ? 121.42 117.70 3.72 0.50 N 44 2 N1 A DA 10 ? ? C6 A DA 10 ? ? N6 A DA 10 ? ? 112.31 118.60 -6.29 0.60 N 45 2 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 110.39 108.30 2.09 0.30 N 46 2 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 110.81 108.30 2.51 0.30 N 47 2 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 110.73 108.30 2.43 0.30 N 48 2 "O4'" A DT 14 ? ? "C1'" A DT 14 ? ? N1 A DT 14 ? ? 113.05 108.30 4.75 0.30 N 49 2 N3 A DT 14 ? ? C2 A DT 14 ? ? O2 A DT 14 ? ? 118.59 122.30 -3.71 0.60 N 50 2 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 111.59 108.30 3.29 0.30 N 51 2 C6 A DT 15 ? ? C5 A DT 15 ? ? C7 A DT 15 ? ? 119.23 122.90 -3.67 0.60 N 52 2 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 112.18 108.30 3.88 0.30 N 53 2 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 114.34 108.30 6.04 0.30 N 54 2 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 111.43 108.30 3.13 0.30 N 55 2 "O4'" A DT 19 ? ? "C1'" A DT 19 ? ? N1 A DT 19 ? ? 111.42 108.30 3.12 0.30 N 56 2 N3 A DT 19 ? ? C2 A DT 19 ? ? O2 A DT 19 ? ? 118.37 122.30 -3.93 0.60 N 57 2 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 110.66 108.30 2.36 0.30 N 58 2 C6 A DT 20 ? ? C5 A DT 20 ? ? C7 A DT 20 ? ? 119.27 122.90 -3.63 0.60 N 59 2 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 110.82 108.30 2.52 0.30 N 60 2 "O4'" A DG 22 ? ? "C1'" A DG 22 ? ? N9 A DG 22 ? ? 112.41 108.30 4.11 0.30 N 61 2 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 112.72 108.30 4.42 0.30 N 62 2 C4 A DA 24 ? ? C5 A DA 24 ? ? C6 A DA 24 ? ? 113.70 117.00 -3.30 0.50 N 63 2 C5 A DA 24 ? ? C6 A DA 24 ? ? N1 A DA 24 ? ? 121.38 117.70 3.68 0.50 N 64 2 N1 A DA 24 ? ? C6 A DA 24 ? ? N6 A DA 24 ? ? 113.30 118.60 -5.30 0.60 N 65 2 N3 A DC 25 ? ? C2 A DC 25 ? ? O2 A DC 25 ? ? 116.47 121.90 -5.43 0.70 N 66 2 "O4'" A DC 27 ? ? "C1'" A DC 27 ? ? N1 A DC 27 ? ? 110.94 108.30 2.64 0.30 N 67 2 N3 A DC 27 ? ? C2 A DC 27 ? ? O2 A DC 27 ? ? 116.48 121.90 -5.42 0.70 N 68 3 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 111.58 108.30 3.28 0.30 N 69 3 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 116.43 121.90 -5.47 0.70 N 70 3 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.18 122.90 -3.72 0.60 N 71 3 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 114.48 108.30 6.18 0.30 N 72 3 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 114.27 108.30 5.97 0.30 N 73 3 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 112.39 108.30 4.09 0.30 N 74 3 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 118.95 122.90 -3.95 0.60 N 75 3 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 112.35 108.30 4.05 0.30 N 76 3 N3 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 117.29 121.90 -4.61 0.70 N 77 3 "O4'" A DA 10 ? ? "C1'" A DA 10 ? ? N9 A DA 10 ? ? 110.60 108.30 2.30 0.30 N 78 3 C4 A DA 10 ? ? C5 A DA 10 ? ? C6 A DA 10 ? ? 113.61 117.00 -3.39 0.50 N 79 3 C5 A DA 10 ? ? C6 A DA 10 ? ? N1 A DA 10 ? ? 121.55 117.70 3.85 0.50 N 80 3 N1 A DA 10 ? ? C6 A DA 10 ? ? N6 A DA 10 ? ? 112.97 118.60 -5.63 0.60 N 81 3 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 111.86 108.30 3.56 0.30 N 82 3 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 112.13 108.30 3.83 0.30 N 83 3 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 111.03 108.30 2.73 0.30 N 84 3 "O4'" A DT 14 ? ? "C1'" A DT 14 ? ? N1 A DT 14 ? ? 112.45 108.30 4.15 0.30 N 85 3 N3 A DT 14 ? ? C2 A DT 14 ? ? O2 A DT 14 ? ? 118.63 122.30 -3.67 0.60 N 86 3 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 111.34 108.30 3.04 0.30 N 87 3 C6 A DT 15 ? ? C5 A DT 15 ? ? C7 A DT 15 ? ? 119.08 122.90 -3.82 0.60 N 88 3 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 111.97 108.30 3.67 0.30 N 89 3 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 112.73 108.30 4.43 0.30 N 90 3 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 111.14 108.30 2.84 0.30 N 91 3 "O4'" A DT 19 ? ? "C1'" A DT 19 ? ? N1 A DT 19 ? ? 112.23 108.30 3.93 0.30 N 92 3 C6 A DT 19 ? ? C5 A DT 19 ? ? C7 A DT 19 ? ? 118.51 122.90 -4.39 0.60 N 93 3 "C3'" A DT 19 ? ? "O3'" A DT 19 ? ? P A DT 20 ? ? 128.08 119.70 8.38 1.20 Y 94 3 N3 A DT 20 ? ? C2 A DT 20 ? ? O2 A DT 20 ? ? 118.43 122.30 -3.87 0.60 N 95 3 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 112.00 108.30 3.70 0.30 N 96 3 "O4'" A DG 22 ? ? "C1'" A DG 22 ? ? N9 A DG 22 ? ? 110.23 108.30 1.93 0.30 N 97 3 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 112.51 108.30 4.21 0.30 N 98 3 C4 A DA 24 ? ? C5 A DA 24 ? ? C6 A DA 24 ? ? 113.66 117.00 -3.34 0.50 N 99 3 C5 A DA 24 ? ? C6 A DA 24 ? ? N1 A DA 24 ? ? 121.42 117.70 3.72 0.50 N 100 3 N1 A DA 24 ? ? C6 A DA 24 ? ? N6 A DA 24 ? ? 113.43 118.60 -5.17 0.60 N 101 3 N3 A DC 25 ? ? C2 A DC 25 ? ? O2 A DC 25 ? ? 116.65 121.90 -5.25 0.70 N 102 3 "O4'" A DG 26 ? ? "C1'" A DG 26 ? ? N9 A DG 26 ? ? 112.42 108.30 4.12 0.30 N 103 3 "O4'" A DC 27 ? ? "C1'" A DC 27 ? ? N1 A DC 27 ? ? 111.72 108.30 3.42 0.30 N 104 3 N3 A DC 27 ? ? C2 A DC 27 ? ? O2 A DC 27 ? ? 116.74 121.90 -5.16 0.70 N 105 4 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 112.51 108.30 4.21 0.30 N 106 4 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 112.28 108.30 3.98 0.30 N 107 4 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 116.39 121.90 -5.51 0.70 N 108 4 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.25 122.90 -3.65 0.60 N 109 4 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 114.85 108.30 6.55 0.30 N 110 4 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 114.02 108.30 5.72 0.30 N 111 4 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 112.27 108.30 3.97 0.30 N 112 4 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.85 108.30 2.55 0.30 N 113 4 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 119.25 122.90 -3.65 0.60 N 114 4 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 111.73 108.30 3.43 0.30 N 115 4 N3 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 117.39 121.90 -4.51 0.70 N 116 4 "O4'" A DA 10 ? ? "C1'" A DA 10 ? ? N9 A DA 10 ? ? 111.11 108.30 2.81 0.30 N 117 4 C4 A DA 10 ? ? C5 A DA 10 ? ? C6 A DA 10 ? ? 113.50 117.00 -3.50 0.50 N 118 4 C5 A DA 10 ? ? C6 A DA 10 ? ? N1 A DA 10 ? ? 121.51 117.70 3.81 0.50 N 119 4 N1 A DA 10 ? ? C6 A DA 10 ? ? N6 A DA 10 ? ? 113.08 118.60 -5.52 0.60 N 120 4 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 112.21 108.30 3.91 0.30 N 121 4 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 112.79 108.30 4.49 0.30 N 122 4 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 111.04 108.30 2.74 0.30 N 123 4 "O4'" A DT 14 ? ? "C1'" A DT 14 ? ? N1 A DT 14 ? ? 112.26 108.30 3.96 0.30 N 124 4 N3 A DT 14 ? ? C2 A DT 14 ? ? O2 A DT 14 ? ? 118.62 122.30 -3.68 0.60 N 125 4 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 111.55 108.30 3.25 0.30 N 126 4 C6 A DT 15 ? ? C5 A DT 15 ? ? C7 A DT 15 ? ? 119.12 122.90 -3.78 0.60 N 127 4 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 111.45 108.30 3.15 0.30 N 128 4 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 112.37 108.30 4.07 0.30 N 129 4 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 111.24 108.30 2.94 0.30 N 130 4 "O4'" A DT 19 ? ? "C1'" A DT 19 ? ? N1 A DT 19 ? ? 112.02 108.30 3.72 0.30 N 131 4 N3 A DT 19 ? ? C2 A DT 19 ? ? O2 A DT 19 ? ? 118.63 122.30 -3.67 0.60 N 132 4 C6 A DT 19 ? ? C5 A DT 19 ? ? C7 A DT 19 ? ? 119.20 122.90 -3.70 0.60 N 133 4 "C3'" A DT 19 ? ? "O3'" A DT 19 ? ? P A DT 20 ? ? 127.93 119.70 8.23 1.20 Y 134 4 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 112.26 108.30 3.96 0.30 N 135 4 N3 A DT 20 ? ? C2 A DT 20 ? ? O2 A DT 20 ? ? 118.55 122.30 -3.75 0.60 N 136 4 C6 A DT 20 ? ? C5 A DT 20 ? ? C7 A DT 20 ? ? 119.25 122.90 -3.65 0.60 N 137 4 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 113.07 108.30 4.77 0.30 N 138 4 "O4'" A DG 22 ? ? "C1'" A DG 22 ? ? N9 A DG 22 ? ? 110.83 108.30 2.53 0.30 N 139 4 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 113.04 108.30 4.74 0.30 N 140 4 C4 A DA 24 ? ? C5 A DA 24 ? ? C6 A DA 24 ? ? 113.67 117.00 -3.33 0.50 N 141 4 C5 A DA 24 ? ? C6 A DA 24 ? ? N1 A DA 24 ? ? 121.36 117.70 3.66 0.50 N 142 4 N1 A DA 24 ? ? C6 A DA 24 ? ? N6 A DA 24 ? ? 113.23 118.60 -5.37 0.60 N 143 4 N3 A DC 25 ? ? C2 A DC 25 ? ? O2 A DC 25 ? ? 116.53 121.90 -5.37 0.70 N 144 4 N3 A DC 27 ? ? C2 A DC 27 ? ? O2 A DC 27 ? ? 116.56 121.90 -5.34 0.70 N 145 5 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 110.17 108.30 1.87 0.30 N 146 5 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 116.51 121.90 -5.39 0.70 N 147 5 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.22 108.30 2.92 0.30 N 148 5 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 118.22 122.90 -4.68 0.60 N 149 5 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 115.33 108.30 7.03 0.30 N 150 5 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 114.17 108.30 5.87 0.30 N 151 5 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.16 108.30 2.86 0.30 N 152 5 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.82 108.30 2.52 0.30 N 153 5 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 119.18 122.90 -3.72 0.60 N 154 5 N3 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 117.31 121.90 -4.59 0.70 N 155 5 "O4'" A DA 10 ? ? "C1'" A DA 10 ? ? N9 A DA 10 ? ? 110.70 108.30 2.40 0.30 N 156 5 C4 A DA 10 ? ? C5 A DA 10 ? ? C6 A DA 10 ? ? 113.60 117.00 -3.40 0.50 N 157 5 C5 A DA 10 ? ? C6 A DA 10 ? ? N1 A DA 10 ? ? 121.59 117.70 3.89 0.50 N 158 5 N1 A DA 10 ? ? C6 A DA 10 ? ? N6 A DA 10 ? ? 112.89 118.60 -5.71 0.60 N 159 5 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 112.98 108.30 4.68 0.30 N 160 5 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 114.57 108.30 6.27 0.30 N 161 5 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 111.59 108.30 3.29 0.30 N 162 5 "O4'" A DT 14 ? ? "C1'" A DT 14 ? ? N1 A DT 14 ? ? 110.54 108.30 2.24 0.30 N 163 5 N3 A DT 14 ? ? C2 A DT 14 ? ? O2 A DT 14 ? ? 118.43 122.30 -3.87 0.60 N 164 5 C6 A DT 14 ? ? C5 A DT 14 ? ? C7 A DT 14 ? ? 119.08 122.90 -3.82 0.60 N 165 5 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 112.12 108.30 3.82 0.30 N 166 5 C6 A DT 15 ? ? C5 A DT 15 ? ? C7 A DT 15 ? ? 119.19 122.90 -3.71 0.60 N 167 5 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 114.83 108.30 6.53 0.30 N 168 5 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 110.99 108.30 2.69 0.30 N 169 5 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 110.12 108.30 1.82 0.30 N 170 5 "O4'" A DT 19 ? ? "C1'" A DT 19 ? ? N1 A DT 19 ? ? 112.84 108.30 4.54 0.30 N 171 5 N3 A DT 19 ? ? C2 A DT 19 ? ? O2 A DT 19 ? ? 118.62 122.30 -3.68 0.60 N 172 5 C6 A DT 19 ? ? C5 A DT 19 ? ? C7 A DT 19 ? ? 119.24 122.90 -3.66 0.60 N 173 5 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 111.12 108.30 2.82 0.30 N 174 5 C6 A DT 20 ? ? C5 A DT 20 ? ? C7 A DT 20 ? ? 119.12 122.90 -3.78 0.60 N 175 5 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 112.81 108.30 4.51 0.30 N 176 5 "O4'" A DG 22 ? ? "C1'" A DG 22 ? ? N9 A DG 22 ? ? 111.58 108.30 3.28 0.30 N 177 5 "O4'" A DA 24 ? ? "C1'" A DA 24 ? ? N9 A DA 24 ? ? 112.31 108.30 4.01 0.30 N 178 5 C4 A DA 24 ? ? C5 A DA 24 ? ? C6 A DA 24 ? ? 113.88 117.00 -3.12 0.50 N 179 5 C5 A DA 24 ? ? C6 A DA 24 ? ? N1 A DA 24 ? ? 121.33 117.70 3.63 0.50 N 180 5 N1 A DA 24 ? ? C6 A DA 24 ? ? N6 A DA 24 ? ? 113.74 118.60 -4.86 0.60 N 181 5 "O4'" A DC 25 ? ? "C1'" A DC 25 ? ? N1 A DC 25 ? ? 113.26 108.30 4.96 0.30 N 182 5 N3 A DC 25 ? ? C2 A DC 25 ? ? O2 A DC 25 ? ? 116.35 121.90 -5.55 0.70 N 183 5 "O4'" A DC 27 ? ? "C1'" A DC 27 ? ? N1 A DC 27 ? ? 110.56 108.30 2.26 0.30 N 184 5 N3 A DC 27 ? ? C2 A DC 27 ? ? O2 A DC 27 ? ? 116.47 121.90 -5.43 0.70 N 185 6 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 112.93 108.30 4.63 0.30 N 186 6 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 111.86 108.30 3.56 0.30 N 187 6 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 116.60 121.90 -5.30 0.70 N 188 6 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 116.04 108.30 7.74 0.30 N 189 6 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 112.26 108.30 3.96 0.30 N 190 6 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.16 108.30 2.86 0.30 N 191 6 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.95 108.30 2.65 0.30 N 192 6 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 119.21 122.90 -3.69 0.60 N 193 6 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 112.68 108.30 4.38 0.30 N 194 6 N3 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 117.15 121.90 -4.75 0.70 N 195 6 "O4'" A DA 10 ? ? "C1'" A DA 10 ? ? N9 A DA 10 ? ? 110.86 108.30 2.56 0.30 N 196 6 C4 A DA 10 ? ? C5 A DA 10 ? ? C6 A DA 10 ? ? 113.54 117.00 -3.46 0.50 N 197 6 C5 A DA 10 ? ? C6 A DA 10 ? ? N1 A DA 10 ? ? 121.48 117.70 3.78 0.50 N 198 6 N1 A DA 10 ? ? C6 A DA 10 ? ? N6 A DA 10 ? ? 112.82 118.60 -5.78 0.60 N 199 6 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 112.78 108.30 4.48 0.30 N 200 6 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 110.70 108.30 2.40 0.30 N 201 6 "O4'" A DT 14 ? ? "C1'" A DT 14 ? ? N1 A DT 14 ? ? 113.19 108.30 4.89 0.30 N 202 6 N3 A DT 14 ? ? C2 A DT 14 ? ? O2 A DT 14 ? ? 118.54 122.30 -3.76 0.60 N 203 6 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 111.47 108.30 3.17 0.30 N 204 6 C6 A DT 15 ? ? C5 A DT 15 ? ? C7 A DT 15 ? ? 119.25 122.90 -3.65 0.60 N 205 6 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 112.20 108.30 3.90 0.30 N 206 6 "O4'" A DT 19 ? ? "C1'" A DT 19 ? ? N1 A DT 19 ? ? 110.39 108.30 2.09 0.30 N 207 6 N3 A DT 19 ? ? C2 A DT 19 ? ? O2 A DT 19 ? ? 117.80 122.30 -4.50 0.60 N 208 6 C6 A DT 19 ? ? C5 A DT 19 ? ? C7 A DT 19 ? ? 119.02 122.90 -3.88 0.60 N 209 6 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 112.60 108.30 4.30 0.30 N 210 6 C6 A DT 20 ? ? C5 A DT 20 ? ? C7 A DT 20 ? ? 119.16 122.90 -3.74 0.60 N 211 6 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 112.42 108.30 4.12 0.30 N 212 6 "O4'" A DG 22 ? ? "C1'" A DG 22 ? ? N9 A DG 22 ? ? 111.02 108.30 2.72 0.30 N 213 6 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 112.43 108.30 4.13 0.30 N 214 6 C4 A DA 24 ? ? C5 A DA 24 ? ? C6 A DA 24 ? ? 113.70 117.00 -3.30 0.50 N 215 6 C5 A DA 24 ? ? C6 A DA 24 ? ? N1 A DA 24 ? ? 121.39 117.70 3.69 0.50 N 216 6 N1 A DA 24 ? ? C6 A DA 24 ? ? N6 A DA 24 ? ? 113.39 118.60 -5.21 0.60 N 217 6 "O4'" A DC 25 ? ? "C1'" A DC 25 ? ? N1 A DC 25 ? ? 111.80 108.30 3.50 0.30 N 218 6 N3 A DC 25 ? ? C2 A DC 25 ? ? O2 A DC 25 ? ? 116.55 121.90 -5.35 0.70 N 219 6 "O4'" A DC 27 ? ? "C1'" A DC 27 ? ? N1 A DC 27 ? ? 110.89 108.30 2.59 0.30 N 220 6 N1 A DC 27 ? ? C2 A DC 27 ? ? O2 A DC 27 ? ? 122.52 118.90 3.62 0.60 N 221 6 N3 A DC 27 ? ? C2 A DC 27 ? ? O2 A DC 27 ? ? 116.47 121.90 -5.43 0.70 N 222 7 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 111.25 108.30 2.95 0.30 N 223 7 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 112.18 108.30 3.88 0.30 N 224 7 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 116.82 121.90 -5.08 0.70 N 225 7 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.19 122.90 -3.71 0.60 N 226 7 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 114.39 108.30 6.09 0.30 N 227 7 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 114.89 108.30 6.59 0.30 N 228 7 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.84 108.30 3.54 0.30 N 229 7 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.53 108.30 2.23 0.30 N 230 7 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 119.12 122.90 -3.78 0.60 N 231 7 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 111.74 108.30 3.44 0.30 N 232 7 N3 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 117.27 121.90 -4.63 0.70 N 233 7 "O4'" A DA 10 ? ? "C1'" A DA 10 ? ? N9 A DA 10 ? ? 110.73 108.30 2.43 0.30 N 234 7 C4 A DA 10 ? ? C5 A DA 10 ? ? C6 A DA 10 ? ? 113.68 117.00 -3.32 0.50 N 235 7 C5 A DA 10 ? ? C6 A DA 10 ? ? N1 A DA 10 ? ? 121.50 117.70 3.80 0.50 N 236 7 N1 A DA 10 ? ? C6 A DA 10 ? ? N6 A DA 10 ? ? 113.21 118.60 -5.39 0.60 N 237 7 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 112.00 108.30 3.70 0.30 N 238 7 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 110.73 108.30 2.43 0.30 N 239 7 "O4'" A DT 14 ? ? "C1'" A DT 14 ? ? N1 A DT 14 ? ? 112.82 108.30 4.52 0.30 N 240 7 N3 A DT 14 ? ? C2 A DT 14 ? ? O2 A DT 14 ? ? 118.54 122.30 -3.76 0.60 N 241 7 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 111.53 108.30 3.23 0.30 N 242 7 C6 A DT 15 ? ? C5 A DT 15 ? ? C7 A DT 15 ? ? 119.23 122.90 -3.67 0.60 N 243 7 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 112.07 108.30 3.77 0.30 N 244 7 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 112.10 108.30 3.80 0.30 N 245 7 N3 A DT 19 ? ? C2 A DT 19 ? ? O2 A DT 19 ? ? 118.40 122.30 -3.90 0.60 N 246 7 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 110.52 108.30 2.22 0.30 N 247 7 C6 A DT 20 ? ? C5 A DT 20 ? ? C7 A DT 20 ? ? 119.18 122.90 -3.72 0.60 N 248 7 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 112.59 108.30 4.29 0.30 N 249 7 "O4'" A DG 22 ? ? "C1'" A DG 22 ? ? N9 A DG 22 ? ? 113.62 108.30 5.32 0.30 N 250 7 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 111.49 108.30 3.19 0.30 N 251 7 C4 A DA 24 ? ? C5 A DA 24 ? ? C6 A DA 24 ? ? 113.63 117.00 -3.37 0.50 N 252 7 C5 A DA 24 ? ? C6 A DA 24 ? ? N1 A DA 24 ? ? 121.36 117.70 3.66 0.50 N 253 7 N1 A DA 24 ? ? C6 A DA 24 ? ? N6 A DA 24 ? ? 113.17 118.60 -5.43 0.60 N 254 7 "O4'" A DC 25 ? ? "C1'" A DC 25 ? ? N1 A DC 25 ? ? 111.31 108.30 3.01 0.30 N 255 7 N3 A DC 25 ? ? C2 A DC 25 ? ? O2 A DC 25 ? ? 116.56 121.90 -5.34 0.70 N 256 7 "O4'" A DC 27 ? ? "C1'" A DC 27 ? ? N1 A DC 27 ? ? 110.82 108.30 2.52 0.30 N 257 7 N3 A DC 27 ? ? C2 A DC 27 ? ? O2 A DC 27 ? ? 116.45 121.90 -5.45 0.70 N 258 8 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 112.94 108.30 4.64 0.30 N 259 8 N1 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 122.53 118.90 3.63 0.60 N 260 8 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 116.32 121.90 -5.58 0.70 N 261 8 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.32 108.30 2.02 0.30 N 262 8 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.68 108.30 2.38 0.30 N 263 8 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.25 122.90 -3.65 0.60 N 264 8 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.83 108.30 2.53 0.30 N 265 8 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 114.28 108.30 5.98 0.30 N 266 8 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 112.38 108.30 4.08 0.30 N 267 8 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.11 108.30 1.81 0.30 N 268 8 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 119.23 122.90 -3.67 0.60 N 269 8 N3 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 117.52 121.90 -4.38 0.70 N 270 8 C4 A DA 10 ? ? C5 A DA 10 ? ? C6 A DA 10 ? ? 113.70 117.00 -3.30 0.50 N 271 8 C5 A DA 10 ? ? C6 A DA 10 ? ? N1 A DA 10 ? ? 121.34 117.70 3.64 0.50 N 272 8 N1 A DA 10 ? ? C6 A DA 10 ? ? N6 A DA 10 ? ? 113.28 118.60 -5.32 0.60 N 273 8 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 112.17 108.30 3.87 0.30 N 274 8 "C3'" A DG 11 ? ? "O3'" A DG 11 ? ? P A DG 12 ? ? 127.52 119.70 7.82 1.20 Y 275 8 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 110.69 108.30 2.39 0.30 N 276 8 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 111.36 108.30 3.06 0.30 N 277 8 "O4'" A DT 14 ? ? "C1'" A DT 14 ? ? N1 A DT 14 ? ? 111.22 108.30 2.92 0.30 N 278 8 C6 A DT 14 ? ? C5 A DT 14 ? ? C7 A DT 14 ? ? 118.98 122.90 -3.92 0.60 N 279 8 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 113.12 108.30 4.82 0.30 N 280 8 C6 A DT 15 ? ? C5 A DT 15 ? ? C7 A DT 15 ? ? 119.28 122.90 -3.62 0.60 N 281 8 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 112.22 108.30 3.92 0.30 N 282 8 "C3'" A DG 16 ? ? "O3'" A DG 16 ? ? P A DG 17 ? ? 127.28 119.70 7.58 1.20 Y 283 8 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 112.06 108.30 3.76 0.30 N 284 8 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 111.14 108.30 2.84 0.30 N 285 8 "O4'" A DT 19 ? ? "C1'" A DT 19 ? ? N1 A DT 19 ? ? 112.38 108.30 4.08 0.30 N 286 8 N3 A DT 19 ? ? C2 A DT 19 ? ? O2 A DT 19 ? ? 118.52 122.30 -3.78 0.60 N 287 8 C6 A DT 19 ? ? C5 A DT 19 ? ? C7 A DT 19 ? ? 119.00 122.90 -3.90 0.60 N 288 8 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 111.39 108.30 3.09 0.30 N 289 8 C6 A DT 20 ? ? C5 A DT 20 ? ? C7 A DT 20 ? ? 119.29 122.90 -3.61 0.60 N 290 8 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 110.85 108.30 2.55 0.30 N 291 8 "O4'" A DG 22 ? ? "C1'" A DG 22 ? ? N9 A DG 22 ? ? 113.38 108.30 5.08 0.30 N 292 8 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 113.16 108.30 4.86 0.30 N 293 8 C4 A DA 24 ? ? C5 A DA 24 ? ? C6 A DA 24 ? ? 113.78 117.00 -3.22 0.50 N 294 8 C5 A DA 24 ? ? C6 A DA 24 ? ? N1 A DA 24 ? ? 121.47 117.70 3.77 0.50 N 295 8 N1 A DA 24 ? ? C6 A DA 24 ? ? N6 A DA 24 ? ? 113.62 118.60 -4.98 0.60 N 296 8 N3 A DC 25 ? ? C2 A DC 25 ? ? O2 A DC 25 ? ? 116.59 121.90 -5.31 0.70 N 297 8 "O4'" A DC 27 ? ? "C1'" A DC 27 ? ? N1 A DC 27 ? ? 111.25 108.30 2.95 0.30 N 298 8 N3 A DC 27 ? ? C2 A DC 27 ? ? O2 A DC 27 ? ? 116.65 121.90 -5.25 0.70 N 299 9 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 112.46 108.30 4.16 0.30 N 300 9 N1 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 122.66 118.90 3.76 0.60 N 301 9 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 116.27 121.90 -5.63 0.70 N 302 9 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.42 108.30 3.12 0.30 N 303 9 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 115.45 108.30 7.15 0.30 N 304 9 "C3'" A DG 5 ? ? "O3'" A DG 5 ? ? P A DG 6 ? ? 126.99 119.70 7.29 1.20 Y 305 9 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 113.88 108.30 5.58 0.30 N 306 9 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 110.31 108.30 2.01 0.30 N 307 9 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 111.35 108.30 3.05 0.30 N 308 9 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 119.21 122.90 -3.69 0.60 N 309 9 N3 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 116.88 121.90 -5.02 0.70 N 310 9 C4 A DA 10 ? ? C5 A DA 10 ? ? C6 A DA 10 ? ? 113.56 117.00 -3.44 0.50 N 311 9 C5 A DA 10 ? ? C6 A DA 10 ? ? N1 A DA 10 ? ? 121.42 117.70 3.72 0.50 N 312 9 N1 A DA 10 ? ? C6 A DA 10 ? ? N6 A DA 10 ? ? 112.56 118.60 -6.04 0.60 N 313 9 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 112.94 108.30 4.64 0.30 N 314 9 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 111.28 108.30 2.98 0.30 N 315 9 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 110.20 108.30 1.90 0.30 N 316 9 "O4'" A DT 14 ? ? "C1'" A DT 14 ? ? N1 A DT 14 ? ? 111.96 108.30 3.66 0.30 N 317 9 N3 A DT 14 ? ? C2 A DT 14 ? ? O2 A DT 14 ? ? 118.60 122.30 -3.70 0.60 N 318 9 C6 A DT 14 ? ? C5 A DT 14 ? ? C7 A DT 14 ? ? 118.97 122.90 -3.93 0.60 N 319 9 "C3'" A DT 14 ? ? "O3'" A DT 14 ? ? P A DT 15 ? ? 127.04 119.70 7.34 1.20 Y 320 9 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 111.76 108.30 3.46 0.30 N 321 9 C6 A DT 15 ? ? C5 A DT 15 ? ? C7 A DT 15 ? ? 119.09 122.90 -3.81 0.60 N 322 9 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 114.13 108.30 5.83 0.30 N 323 9 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 110.62 108.30 2.32 0.30 N 324 9 C6 A DT 19 ? ? C5 A DT 19 ? ? C7 A DT 19 ? ? 119.27 122.90 -3.63 0.60 N 325 9 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 111.72 108.30 3.42 0.30 N 326 9 C6 A DT 20 ? ? C5 A DT 20 ? ? C7 A DT 20 ? ? 119.28 122.90 -3.62 0.60 N 327 9 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 112.39 108.30 4.09 0.30 N 328 9 C4 A DA 24 ? ? C5 A DA 24 ? ? C6 A DA 24 ? ? 113.52 117.00 -3.48 0.50 N 329 9 C5 A DA 24 ? ? C6 A DA 24 ? ? N1 A DA 24 ? ? 121.28 117.70 3.58 0.50 N 330 9 N1 A DA 24 ? ? C6 A DA 24 ? ? N6 A DA 24 ? ? 112.98 118.60 -5.62 0.60 N 331 9 N3 A DC 25 ? ? C2 A DC 25 ? ? O2 A DC 25 ? ? 116.43 121.90 -5.47 0.70 N 332 9 "O4'" A DC 27 ? ? "C1'" A DC 27 ? ? N1 A DC 27 ? ? 111.18 108.30 2.88 0.30 N 333 9 N3 A DC 27 ? ? C2 A DC 27 ? ? O2 A DC 27 ? ? 116.66 121.90 -5.24 0.70 N 334 10 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 110.12 108.30 1.82 0.30 N 335 10 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 116.50 121.90 -5.40 0.70 N 336 10 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.18 122.90 -3.72 0.60 N 337 10 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 113.84 108.30 5.54 0.30 N 338 10 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 114.35 108.30 6.05 0.30 N 339 10 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 113.53 108.30 5.23 0.30 N 340 10 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 111.04 108.30 2.74 0.30 N 341 10 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 119.25 122.90 -3.65 0.60 N 342 10 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 111.71 108.30 3.41 0.30 N 343 10 N3 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 117.44 121.90 -4.46 0.70 N 344 10 "O4'" A DA 10 ? ? "C1'" A DA 10 ? ? N9 A DA 10 ? ? 110.73 108.30 2.43 0.30 N 345 10 C4 A DA 10 ? ? C5 A DA 10 ? ? C6 A DA 10 ? ? 113.68 117.00 -3.32 0.50 N 346 10 C5 A DA 10 ? ? C6 A DA 10 ? ? N1 A DA 10 ? ? 121.47 117.70 3.77 0.50 N 347 10 N1 A DA 10 ? ? C6 A DA 10 ? ? N6 A DA 10 ? ? 113.22 118.60 -5.38 0.60 N 348 10 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 112.78 108.30 4.48 0.30 N 349 10 "C3'" A DG 11 ? ? "O3'" A DG 11 ? ? P A DG 12 ? ? 127.26 119.70 7.56 1.20 Y 350 10 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 111.69 108.30 3.39 0.30 N 351 10 "O4'" A DT 14 ? ? "C1'" A DT 14 ? ? N1 A DT 14 ? ? 110.33 108.30 2.03 0.30 N 352 10 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 113.18 108.30 4.88 0.30 N 353 10 C6 A DT 15 ? ? C5 A DT 15 ? ? C7 A DT 15 ? ? 119.10 122.90 -3.80 0.60 N 354 10 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 112.94 108.30 4.64 0.30 N 355 10 "C3'" A DG 16 ? ? "O3'" A DG 16 ? ? P A DG 17 ? ? 126.98 119.70 7.28 1.20 Y 356 10 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 113.66 108.30 5.36 0.30 N 357 10 "O4'" A DT 19 ? ? "C1'" A DT 19 ? ? N1 A DT 19 ? ? 110.41 108.30 2.11 0.30 N 358 10 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 112.82 108.30 4.52 0.30 N 359 10 C6 A DT 20 ? ? C5 A DT 20 ? ? C7 A DT 20 ? ? 119.12 122.90 -3.78 0.60 N 360 10 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 113.30 108.30 5.00 0.30 N 361 10 "C3'" A DG 21 ? ? "O3'" A DG 21 ? ? P A DG 22 ? ? 126.97 119.70 7.27 1.20 Y 362 10 "O4'" A DG 22 ? ? "C1'" A DG 22 ? ? N9 A DG 22 ? ? 111.36 108.30 3.06 0.30 N 363 10 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 113.37 108.30 5.07 0.30 N 364 10 C4 A DA 24 ? ? C5 A DA 24 ? ? C6 A DA 24 ? ? 113.71 117.00 -3.29 0.50 N 365 10 C5 A DA 24 ? ? C6 A DA 24 ? ? N1 A DA 24 ? ? 121.48 117.70 3.78 0.50 N 366 10 N1 A DA 24 ? ? C6 A DA 24 ? ? N6 A DA 24 ? ? 113.26 118.60 -5.34 0.60 N 367 10 "O4'" A DC 25 ? ? "C1'" A DC 25 ? ? N1 A DC 25 ? ? 111.63 108.30 3.33 0.30 N 368 10 N3 A DC 25 ? ? C2 A DC 25 ? ? O2 A DC 25 ? ? 116.45 121.90 -5.45 0.70 N 369 10 N3 A DC 27 ? ? C2 A DC 27 ? ? O2 A DC 27 ? ? 116.67 121.90 -5.23 0.70 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DT A 4 ? ? 0.067 'SIDE CHAIN' 2 2 DG A 1 ? ? 0.056 'SIDE CHAIN' 3 2 DT A 4 ? ? 0.063 'SIDE CHAIN' 4 2 DG A 17 ? ? 0.050 'SIDE CHAIN' 5 3 DG A 1 ? ? 0.059 'SIDE CHAIN' 6 3 DG A 23 ? ? 0.050 'SIDE CHAIN' 7 3 DC A 25 ? ? 0.063 'SIDE CHAIN' 8 4 DG A 6 ? ? 0.058 'SIDE CHAIN' 9 4 DG A 21 ? ? 0.075 'SIDE CHAIN' 10 4 DG A 23 ? ? 0.066 'SIDE CHAIN' 11 5 DG A 12 ? ? 0.078 'SIDE CHAIN' 12 6 DT A 14 ? ? 0.082 'SIDE CHAIN' 13 6 DG A 16 ? ? 0.056 'SIDE CHAIN' 14 6 DT A 19 ? ? 0.082 'SIDE CHAIN' 15 6 DG A 23 ? ? 0.054 'SIDE CHAIN' 16 7 DT A 19 ? ? 0.072 'SIDE CHAIN' 17 8 DG A 1 ? ? 0.053 'SIDE CHAIN' 18 8 DG A 6 ? ? 0.050 'SIDE CHAIN' 19 8 DG A 7 ? ? 0.051 'SIDE CHAIN' 20 8 DA A 10 ? ? 0.055 'SIDE CHAIN' 21 8 DT A 14 ? ? 0.079 'SIDE CHAIN' 22 8 DG A 23 ? ? 0.054 'SIDE CHAIN' 23 8 DC A 25 ? ? 0.060 'SIDE CHAIN' 24 9 DT A 4 ? ? 0.080 'SIDE CHAIN' 25 10 DG A 23 ? ? 0.063 'SIDE CHAIN' # _pdbx_nmr_ensemble.entry_id 8R4E _pdbx_nmr_ensemble.conformers_calculated_total_number 10 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 8R4E _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.3 mM DNA (27-MER), 90% H2O/10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label sample1 _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details '10 mM K+, 303 K' # _pdbx_nmr_exptl_sample.solution_id 1 _pdbx_nmr_exptl_sample.component 'DNA (27-MER)' _pdbx_nmr_exptl_sample.concentration 0.3 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mM _pdbx_nmr_exptl_sample.isotopic_labeling 'natural abundance' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 303 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 10 _pdbx_nmr_exptl_sample_conditions.details '10 mM K+, 303 K' _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label condition1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H NOESY' 1 isotropic 2 1 1 '2D 1H-13C HSQC' 1 isotropic 3 1 1 '2D DQF-COSY' 1 isotropic # _pdbx_nmr_refine.entry_id 8R4E _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 2 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 'chemical shift assignment' 'CcpNmr Analysis' 2.4.2 CCPN 2 'structure calculation' Amber 18 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' 3 refinement Amber 18 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' 4 'data analysis' TopSpin 4.0.7 'Bruker Biospin' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8R4E 'double helix' 8R4E 'hairpin loop' 8R4E 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 A DC 27 1_555 -0.425 -0.097 0.091 3.753 -0.991 -0.302 1 A_DG1:DC27_A A 1 ? A 27 ? 19 1 1 A DC 2 1_555 A DG 26 1_555 0.330 -0.104 0.202 7.224 -10.253 -1.363 2 A_DC2:DG26_A A 2 ? A 26 ? 19 1 1 A DG 3 1_555 A DC 25 1_555 -0.313 -0.081 -0.003 -8.918 -19.285 0.249 3 A_DG3:DC25_A A 3 ? A 25 ? 19 1 1 A DT 4 1_555 A DA 24 1_555 -0.285 0.036 0.191 -13.583 -17.286 -0.842 4 A_DT4:DA24_A A 4 ? A 24 ? 20 1 1 A DG 18 1_555 A DG 23 1_555 1.811 3.332 0.402 -10.095 2.173 -90.208 5 A_DG18:DG23_A A 18 ? A 23 ? 6 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 A DC 27 1_555 A DC 2 1_555 A DG 26 1_555 0.236 0.581 3.342 0.128 -5.732 37.914 1.608 -0.343 3.225 -8.761 -0.196 38.329 1 AA_DG1DC2:DG26DC27_AA A 1 ? A 27 ? A 2 ? A 26 ? 1 A DC 2 1_555 A DG 26 1_555 A DG 3 1_555 A DC 25 1_555 -0.854 0.071 3.583 -2.169 6.092 37.447 -0.749 1.007 3.592 9.402 3.348 37.981 2 AA_DC2DG3:DC25DG26_AA A 2 ? A 26 ? A 3 ? A 25 ? 1 A DG 3 1_555 A DC 25 1_555 A DT 4 1_555 A DA 24 1_555 -0.204 -0.504 3.452 -1.342 -1.750 38.440 -0.535 0.133 3.475 -2.656 2.036 38.501 3 AA_DG3DT4:DA24DC25_AA A 3 ? A 25 ? A 4 ? A 24 ? 1 A DT 4 1_555 A DA 24 1_555 A DG 18 1_555 A DG 23 1_555 4.147 -0.954 2.587 -130.214 -106.160 -130.734 0.891 1.568 3.437 53.422 -65.527 -175.008 4 AA_DT4DG18:DG23DA24_AA A 4 ? A 24 ? A 18 ? A 23 ? # _pdbx_audit_support.funding_organization 'German Research Foundation (DFG)' _pdbx_audit_support.country Germany _pdbx_audit_support.grant_number 410497337 _pdbx_audit_support.ordinal 1 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AVANCE NEO' _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.details ? # _atom_sites.entry_id 8R4E _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P # loop_