data_8R4Y # _entry.id 8R4Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.404 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8R4Y pdb_00008r4y 10.2210/pdb8r4y/pdb WWPDB D_1292134541 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-08-13 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8R4Y _pdbx_database_status.recvd_initial_deposition_date 2023-11-14 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email cdemarcoslousa001@dundee.ac.uk _pdbx_contact_author.name_first Carine _pdbx_contact_author.name_last 'De Marcos Lousa' _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-5041-6261 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Borges, R.J.' 1 0000-0001-6049-8806 'Eldahshoury, M.K.' 2 0000-0003-3067-2556 'Nettleship, J.' 3 0000-0002-1258-1733 'Bird, L.' 4 0000-0002-9846-5716 'An, J.' 5 ? 'Levada, A.J.L.' 6 ? 'Shah, N.' 7 0000-0001-7689-4117 'Thomson, M.' 8 ? 'Fontes, M.R.M.' 9 0000-0002-4634-6221 'Owens, R.' 10 0000-0002-3705-2993 'Denecke, J.' 11 0000-0002-2275-8045 'Postis, V.' 12 ? 'Uson, I.' 13 ? 'Goldman, A.' 14 0000-0001-8032-9700 'De Marcos Lousa, C.' 15 0000-0002-5041-6261 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;The crystal structure of Vacuolar Sorting Receptor 1 (VSR1) lumenal domain reveals a stable domain-swapped trimer and a potential new cargo binding site ; _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Borges, R.J.' 1 0000-0001-6049-8806 primary 'Eldahshoury, M.K.' 2 0000-0003-3067-2556 primary 'Nettleship, J.' 3 0000-0002-1258-1733 primary 'Bird, L.' 4 0000-0002-9846-5716 primary 'An, J.' 5 0000-0002-3996-5956 primary 'Levada, A.J.L.' 6 0000-0002-1944-5291 primary 'Shah, N.' 7 0000-0001-7689-4117 primary 'Thomson, M.' 8 ? primary 'Fontes, M.R.M.' 9 0000-0002-4634-6221 primary 'Owens, R.' 10 0000-0002-3705-2993 primary 'Denecke, J.' 11 0000-0002-2275-8045 primary 'Postis, V.' 12 ? primary 'Uson, I.' 13 0000-0003-2504-1696 primary 'Goldman, A.' 14 0000-0001-8032-9700 primary 'De Marcos Lousa, C.' 15 0000-0002-5041-6261 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Vacuolar-sorting receptor 1' 60202.043 1 ? ? ? ? 2 branched man ;alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 748.682 1 ? ? ? ? 3 non-polymer syn alpha-D-mannopyranose 180.156 1 ? ? ? ? 4 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 2 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'AtVSR1,BP80-like protein b,AtBP80b,Epidermal growth factor receptor-like protein 1,AtELP,AtELP1,Spot 3 protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;RFVVEKNNLKVTSPDSIKGIYECAIGNFGVPQYGGTLVGTVVYPKSNQKACKSYSDFDISFKSKPGRLPTFVLIDRGDCY FTLKAWIAQQAGAAAILVADSKAEPLITMDTPEEDKSDADYLQNITIPSALITKTLGDSIKSALSGGDMVNMKLDWTESV PHPDERVEYELWTNSNDECGKKCDTQIEFLKNFKGAAQILEKGGHTQFTPHYITWYCPEAFTLSKQCKSQCINHGRYCAP DPEQDFTKGYDGKDVVVQNLRQACVYRVMNDTGKPWVWWDYVTDFAIRCPMKEKKYTKECADGIIKSLGIDLKKVDKCIG DPEADVENPVLKAEQESQIGKGSRGDVTILPTLVVNNRQYRGKLEKGAVLKAMCSGFQESTEPAICLTEDLETNECLENN GGCWQDKAANITACRDTFRGRLCECPTVQGVKFVGDGYTHCKASGALHCGINNGGCWRESRGGFTYSACVDDHSKDCKCP LGFKGDGVKNCEDVDECKEKTVCQCPECKCKNTWGSYECSCSNGLLYMREHDTCIGSGKVGTTK ; _entity_poly.pdbx_seq_one_letter_code_can ;RFVVEKNNLKVTSPDSIKGIYECAIGNFGVPQYGGTLVGTVVYPKSNQKACKSYSDFDISFKSKPGRLPTFVLIDRGDCY FTLKAWIAQQAGAAAILVADSKAEPLITMDTPEEDKSDADYLQNITIPSALITKTLGDSIKSALSGGDMVNMKLDWTESV PHPDERVEYELWTNSNDECGKKCDTQIEFLKNFKGAAQILEKGGHTQFTPHYITWYCPEAFTLSKQCKSQCINHGRYCAP DPEQDFTKGYDGKDVVVQNLRQACVYRVMNDTGKPWVWWDYVTDFAIRCPMKEKKYTKECADGIIKSLGIDLKKVDKCIG DPEADVENPVLKAEQESQIGKGSRGDVTILPTLVVNNRQYRGKLEKGAVLKAMCSGFQESTEPAICLTEDLETNECLENN GGCWQDKAANITACRDTFRGRLCECPTVQGVKFVGDGYTHCKASGALHCGINNGGCWRESRGGFTYSACVDDHSKDCKCP LGFKGDGVKNCEDVDECKEKTVCQCPECKCKNTWGSYECSCSNGLLYMREHDTCIGSGKVGTTK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 alpha-D-mannopyranose MAN 4 2-acetamido-2-deoxy-beta-D-glucopyranose NAG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 PHE n 1 3 VAL n 1 4 VAL n 1 5 GLU n 1 6 LYS n 1 7 ASN n 1 8 ASN n 1 9 LEU n 1 10 LYS n 1 11 VAL n 1 12 THR n 1 13 SER n 1 14 PRO n 1 15 ASP n 1 16 SER n 1 17 ILE n 1 18 LYS n 1 19 GLY n 1 20 ILE n 1 21 TYR n 1 22 GLU n 1 23 CYS n 1 24 ALA n 1 25 ILE n 1 26 GLY n 1 27 ASN n 1 28 PHE n 1 29 GLY n 1 30 VAL n 1 31 PRO n 1 32 GLN n 1 33 TYR n 1 34 GLY n 1 35 GLY n 1 36 THR n 1 37 LEU n 1 38 VAL n 1 39 GLY n 1 40 THR n 1 41 VAL n 1 42 VAL n 1 43 TYR n 1 44 PRO n 1 45 LYS n 1 46 SER n 1 47 ASN n 1 48 GLN n 1 49 LYS n 1 50 ALA n 1 51 CYS n 1 52 LYS n 1 53 SER n 1 54 TYR n 1 55 SER n 1 56 ASP n 1 57 PHE n 1 58 ASP n 1 59 ILE n 1 60 SER n 1 61 PHE n 1 62 LYS n 1 63 SER n 1 64 LYS n 1 65 PRO n 1 66 GLY n 1 67 ARG n 1 68 LEU n 1 69 PRO n 1 70 THR n 1 71 PHE n 1 72 VAL n 1 73 LEU n 1 74 ILE n 1 75 ASP n 1 76 ARG n 1 77 GLY n 1 78 ASP n 1 79 CYS n 1 80 TYR n 1 81 PHE n 1 82 THR n 1 83 LEU n 1 84 LYS n 1 85 ALA n 1 86 TRP n 1 87 ILE n 1 88 ALA n 1 89 GLN n 1 90 GLN n 1 91 ALA n 1 92 GLY n 1 93 ALA n 1 94 ALA n 1 95 ALA n 1 96 ILE n 1 97 LEU n 1 98 VAL n 1 99 ALA n 1 100 ASP n 1 101 SER n 1 102 LYS n 1 103 ALA n 1 104 GLU n 1 105 PRO n 1 106 LEU n 1 107 ILE n 1 108 THR n 1 109 MET n 1 110 ASP n 1 111 THR n 1 112 PRO n 1 113 GLU n 1 114 GLU n 1 115 ASP n 1 116 LYS n 1 117 SER n 1 118 ASP n 1 119 ALA n 1 120 ASP n 1 121 TYR n 1 122 LEU n 1 123 GLN n 1 124 ASN n 1 125 ILE n 1 126 THR n 1 127 ILE n 1 128 PRO n 1 129 SER n 1 130 ALA n 1 131 LEU n 1 132 ILE n 1 133 THR n 1 134 LYS n 1 135 THR n 1 136 LEU n 1 137 GLY n 1 138 ASP n 1 139 SER n 1 140 ILE n 1 141 LYS n 1 142 SER n 1 143 ALA n 1 144 LEU n 1 145 SER n 1 146 GLY n 1 147 GLY n 1 148 ASP n 1 149 MET n 1 150 VAL n 1 151 ASN n 1 152 MET n 1 153 LYS n 1 154 LEU n 1 155 ASP n 1 156 TRP n 1 157 THR n 1 158 GLU n 1 159 SER n 1 160 VAL n 1 161 PRO n 1 162 HIS n 1 163 PRO n 1 164 ASP n 1 165 GLU n 1 166 ARG n 1 167 VAL n 1 168 GLU n 1 169 TYR n 1 170 GLU n 1 171 LEU n 1 172 TRP n 1 173 THR n 1 174 ASN n 1 175 SER n 1 176 ASN n 1 177 ASP n 1 178 GLU n 1 179 CYS n 1 180 GLY n 1 181 LYS n 1 182 LYS n 1 183 CYS n 1 184 ASP n 1 185 THR n 1 186 GLN n 1 187 ILE n 1 188 GLU n 1 189 PHE n 1 190 LEU n 1 191 LYS n 1 192 ASN n 1 193 PHE n 1 194 LYS n 1 195 GLY n 1 196 ALA n 1 197 ALA n 1 198 GLN n 1 199 ILE n 1 200 LEU n 1 201 GLU n 1 202 LYS n 1 203 GLY n 1 204 GLY n 1 205 HIS n 1 206 THR n 1 207 GLN n 1 208 PHE n 1 209 THR n 1 210 PRO n 1 211 HIS n 1 212 TYR n 1 213 ILE n 1 214 THR n 1 215 TRP n 1 216 TYR n 1 217 CYS n 1 218 PRO n 1 219 GLU n 1 220 ALA n 1 221 PHE n 1 222 THR n 1 223 LEU n 1 224 SER n 1 225 LYS n 1 226 GLN n 1 227 CYS n 1 228 LYS n 1 229 SER n 1 230 GLN n 1 231 CYS n 1 232 ILE n 1 233 ASN n 1 234 HIS n 1 235 GLY n 1 236 ARG n 1 237 TYR n 1 238 CYS n 1 239 ALA n 1 240 PRO n 1 241 ASP n 1 242 PRO n 1 243 GLU n 1 244 GLN n 1 245 ASP n 1 246 PHE n 1 247 THR n 1 248 LYS n 1 249 GLY n 1 250 TYR n 1 251 ASP n 1 252 GLY n 1 253 LYS n 1 254 ASP n 1 255 VAL n 1 256 VAL n 1 257 VAL n 1 258 GLN n 1 259 ASN n 1 260 LEU n 1 261 ARG n 1 262 GLN n 1 263 ALA n 1 264 CYS n 1 265 VAL n 1 266 TYR n 1 267 ARG n 1 268 VAL n 1 269 MET n 1 270 ASN n 1 271 ASP n 1 272 THR n 1 273 GLY n 1 274 LYS n 1 275 PRO n 1 276 TRP n 1 277 VAL n 1 278 TRP n 1 279 TRP n 1 280 ASP n 1 281 TYR n 1 282 VAL n 1 283 THR n 1 284 ASP n 1 285 PHE n 1 286 ALA n 1 287 ILE n 1 288 ARG n 1 289 CYS n 1 290 PRO n 1 291 MET n 1 292 LYS n 1 293 GLU n 1 294 LYS n 1 295 LYS n 1 296 TYR n 1 297 THR n 1 298 LYS n 1 299 GLU n 1 300 CYS n 1 301 ALA n 1 302 ASP n 1 303 GLY n 1 304 ILE n 1 305 ILE n 1 306 LYS n 1 307 SER n 1 308 LEU n 1 309 GLY n 1 310 ILE n 1 311 ASP n 1 312 LEU n 1 313 LYS n 1 314 LYS n 1 315 VAL n 1 316 ASP n 1 317 LYS n 1 318 CYS n 1 319 ILE n 1 320 GLY n 1 321 ASP n 1 322 PRO n 1 323 GLU n 1 324 ALA n 1 325 ASP n 1 326 VAL n 1 327 GLU n 1 328 ASN n 1 329 PRO n 1 330 VAL n 1 331 LEU n 1 332 LYS n 1 333 ALA n 1 334 GLU n 1 335 GLN n 1 336 GLU n 1 337 SER n 1 338 GLN n 1 339 ILE n 1 340 GLY n 1 341 LYS n 1 342 GLY n 1 343 SER n 1 344 ARG n 1 345 GLY n 1 346 ASP n 1 347 VAL n 1 348 THR n 1 349 ILE n 1 350 LEU n 1 351 PRO n 1 352 THR n 1 353 LEU n 1 354 VAL n 1 355 VAL n 1 356 ASN n 1 357 ASN n 1 358 ARG n 1 359 GLN n 1 360 TYR n 1 361 ARG n 1 362 GLY n 1 363 LYS n 1 364 LEU n 1 365 GLU n 1 366 LYS n 1 367 GLY n 1 368 ALA n 1 369 VAL n 1 370 LEU n 1 371 LYS n 1 372 ALA n 1 373 MET n 1 374 CYS n 1 375 SER n 1 376 GLY n 1 377 PHE n 1 378 GLN n 1 379 GLU n 1 380 SER n 1 381 THR n 1 382 GLU n 1 383 PRO n 1 384 ALA n 1 385 ILE n 1 386 CYS n 1 387 LEU n 1 388 THR n 1 389 GLU n 1 390 ASP n 1 391 LEU n 1 392 GLU n 1 393 THR n 1 394 ASN n 1 395 GLU n 1 396 CYS n 1 397 LEU n 1 398 GLU n 1 399 ASN n 1 400 ASN n 1 401 GLY n 1 402 GLY n 1 403 CYS n 1 404 TRP n 1 405 GLN n 1 406 ASP n 1 407 LYS n 1 408 ALA n 1 409 ALA n 1 410 ASN n 1 411 ILE n 1 412 THR n 1 413 ALA n 1 414 CYS n 1 415 ARG n 1 416 ASP n 1 417 THR n 1 418 PHE n 1 419 ARG n 1 420 GLY n 1 421 ARG n 1 422 LEU n 1 423 CYS n 1 424 GLU n 1 425 CYS n 1 426 PRO n 1 427 THR n 1 428 VAL n 1 429 GLN n 1 430 GLY n 1 431 VAL n 1 432 LYS n 1 433 PHE n 1 434 VAL n 1 435 GLY n 1 436 ASP n 1 437 GLY n 1 438 TYR n 1 439 THR n 1 440 HIS n 1 441 CYS n 1 442 LYS n 1 443 ALA n 1 444 SER n 1 445 GLY n 1 446 ALA n 1 447 LEU n 1 448 HIS n 1 449 CYS n 1 450 GLY n 1 451 ILE n 1 452 ASN n 1 453 ASN n 1 454 GLY n 1 455 GLY n 1 456 CYS n 1 457 TRP n 1 458 ARG n 1 459 GLU n 1 460 SER n 1 461 ARG n 1 462 GLY n 1 463 GLY n 1 464 PHE n 1 465 THR n 1 466 TYR n 1 467 SER n 1 468 ALA n 1 469 CYS n 1 470 VAL n 1 471 ASP n 1 472 ASP n 1 473 HIS n 1 474 SER n 1 475 LYS n 1 476 ASP n 1 477 CYS n 1 478 LYS n 1 479 CYS n 1 480 PRO n 1 481 LEU n 1 482 GLY n 1 483 PHE n 1 484 LYS n 1 485 GLY n 1 486 ASP n 1 487 GLY n 1 488 VAL n 1 489 LYS n 1 490 ASN n 1 491 CYS n 1 492 GLU n 1 493 ASP n 1 494 VAL n 1 495 ASP n 1 496 GLU n 1 497 CYS n 1 498 LYS n 1 499 GLU n 1 500 LYS n 1 501 THR n 1 502 VAL n 1 503 CYS n 1 504 GLN n 1 505 CYS n 1 506 PRO n 1 507 GLU n 1 508 CYS n 1 509 LYS n 1 510 CYS n 1 511 LYS n 1 512 ASN n 1 513 THR n 1 514 TRP n 1 515 GLY n 1 516 SER n 1 517 TYR n 1 518 GLU n 1 519 CYS n 1 520 SER n 1 521 CYS n 1 522 SER n 1 523 ASN n 1 524 GLY n 1 525 LEU n 1 526 LEU n 1 527 TYR n 1 528 MET n 1 529 ARG n 1 530 GLU n 1 531 HIS n 1 532 ASP n 1 533 THR n 1 534 CYS n 1 535 ILE n 1 536 GLY n 1 537 SER n 1 538 GLY n 1 539 LYS n 1 540 VAL n 1 541 GLY n 1 542 THR n 1 543 THR n 1 544 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 544 _entity_src_gen.gene_src_common_name 'thale cress' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'VSR1, BP80B, ELP, ELP1, At3g52850, F8J2.20' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Arabidopsis thaliana' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3702 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line Expi293 _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DManpa1-3DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/3,4,3/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3/a4-b1_b4-c1_c3-d1' WURCS PDB2Glycan 1.1.0 3 2 '[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 2 4 MAN C1 O1 3 BMA O3 HO3 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 20 20 ARG ARG A . n A 1 2 PHE 2 21 21 PHE PHE A . n A 1 3 VAL 3 22 22 VAL VAL A . n A 1 4 VAL 4 23 23 VAL VAL A . n A 1 5 GLU 5 24 24 GLU GLU A . n A 1 6 LYS 6 25 25 LYS LYS A . n A 1 7 ASN 7 26 26 ASN ASN A . n A 1 8 ASN 8 27 27 ASN ASN A . n A 1 9 LEU 9 28 28 LEU LEU A . n A 1 10 LYS 10 29 29 LYS LYS A . n A 1 11 VAL 11 30 30 VAL VAL A . n A 1 12 THR 12 31 31 THR THR A . n A 1 13 SER 13 32 32 SER SER A . n A 1 14 PRO 14 33 33 PRO PRO A . n A 1 15 ASP 15 34 34 ASP ASP A . n A 1 16 SER 16 35 35 SER SER A . n A 1 17 ILE 17 36 36 ILE ILE A . n A 1 18 LYS 18 37 37 LYS LYS A . n A 1 19 GLY 19 38 38 GLY GLY A . n A 1 20 ILE 20 39 39 ILE ILE A . n A 1 21 TYR 21 40 40 TYR TYR A . n A 1 22 GLU 22 41 41 GLU GLU A . n A 1 23 CYS 23 42 42 CYS CYS A . n A 1 24 ALA 24 43 43 ALA ALA A . n A 1 25 ILE 25 44 44 ILE ILE A . n A 1 26 GLY 26 45 45 GLY GLY A . n A 1 27 ASN 27 46 46 ASN ASN A . n A 1 28 PHE 28 47 47 PHE PHE A . n A 1 29 GLY 29 48 48 GLY GLY A . n A 1 30 VAL 30 49 49 VAL VAL A . n A 1 31 PRO 31 50 50 PRO PRO A . n A 1 32 GLN 32 51 51 GLN GLN A . n A 1 33 TYR 33 52 52 TYR TYR A . n A 1 34 GLY 34 53 53 GLY GLY A . n A 1 35 GLY 35 54 54 GLY GLY A . n A 1 36 THR 36 55 55 THR THR A . n A 1 37 LEU 37 56 56 LEU LEU A . n A 1 38 VAL 38 57 57 VAL VAL A . n A 1 39 GLY 39 58 58 GLY GLY A . n A 1 40 THR 40 59 59 THR THR A . n A 1 41 VAL 41 60 60 VAL VAL A . n A 1 42 VAL 42 61 61 VAL VAL A . n A 1 43 TYR 43 62 62 TYR TYR A . n A 1 44 PRO 44 63 63 PRO PRO A . n A 1 45 LYS 45 64 64 LYS LYS A . n A 1 46 SER 46 65 65 SER SER A . n A 1 47 ASN 47 66 66 ASN ASN A . n A 1 48 GLN 48 67 67 GLN GLN A . n A 1 49 LYS 49 68 68 LYS LYS A . n A 1 50 ALA 50 69 69 ALA ALA A . n A 1 51 CYS 51 70 70 CYS CYS A . n A 1 52 LYS 52 71 71 LYS LYS A . n A 1 53 SER 53 72 72 SER SER A . n A 1 54 TYR 54 73 73 TYR TYR A . n A 1 55 SER 55 74 74 SER SER A . n A 1 56 ASP 56 75 75 ASP ASP A . n A 1 57 PHE 57 76 76 PHE PHE A . n A 1 58 ASP 58 77 77 ASP ASP A . n A 1 59 ILE 59 78 78 ILE ILE A . n A 1 60 SER 60 79 79 SER SER A . n A 1 61 PHE 61 80 80 PHE PHE A . n A 1 62 LYS 62 81 81 LYS LYS A . n A 1 63 SER 63 82 82 SER SER A . n A 1 64 LYS 64 83 83 LYS LYS A . n A 1 65 PRO 65 84 84 PRO PRO A . n A 1 66 GLY 66 85 85 GLY GLY A . n A 1 67 ARG 67 86 86 ARG ARG A . n A 1 68 LEU 68 87 87 LEU LEU A . n A 1 69 PRO 69 88 88 PRO PRO A . n A 1 70 THR 70 89 89 THR THR A . n A 1 71 PHE 71 90 90 PHE PHE A . n A 1 72 VAL 72 91 91 VAL VAL A . n A 1 73 LEU 73 92 92 LEU LEU A . n A 1 74 ILE 74 93 93 ILE ILE A . n A 1 75 ASP 75 94 94 ASP ASP A . n A 1 76 ARG 76 95 95 ARG ARG A . n A 1 77 GLY 77 96 96 GLY GLY A . n A 1 78 ASP 78 97 97 ASP ASP A . n A 1 79 CYS 79 98 98 CYS CYS A . n A 1 80 TYR 80 99 99 TYR TYR A . n A 1 81 PHE 81 100 100 PHE PHE A . n A 1 82 THR 82 101 101 THR THR A . n A 1 83 LEU 83 102 102 LEU LEU A . n A 1 84 LYS 84 103 103 LYS LYS A . n A 1 85 ALA 85 104 104 ALA ALA A . n A 1 86 TRP 86 105 105 TRP TRP A . n A 1 87 ILE 87 106 106 ILE ILE A . n A 1 88 ALA 88 107 107 ALA ALA A . n A 1 89 GLN 89 108 108 GLN GLN A . n A 1 90 GLN 90 109 109 GLN GLN A . n A 1 91 ALA 91 110 110 ALA ALA A . n A 1 92 GLY 92 111 111 GLY GLY A . n A 1 93 ALA 93 112 112 ALA ALA A . n A 1 94 ALA 94 113 113 ALA ALA A . n A 1 95 ALA 95 114 114 ALA ALA A . n A 1 96 ILE 96 115 115 ILE ILE A . n A 1 97 LEU 97 116 116 LEU LEU A . n A 1 98 VAL 98 117 117 VAL VAL A . n A 1 99 ALA 99 118 118 ALA ALA A . n A 1 100 ASP 100 119 119 ASP ASP A . n A 1 101 SER 101 120 120 SER SER A . n A 1 102 LYS 102 121 121 LYS LYS A . n A 1 103 ALA 103 122 122 ALA ALA A . n A 1 104 GLU 104 123 123 GLU GLU A . n A 1 105 PRO 105 124 124 PRO PRO A . n A 1 106 LEU 106 125 125 LEU LEU A . n A 1 107 ILE 107 126 126 ILE ILE A . n A 1 108 THR 108 127 127 THR THR A . n A 1 109 MET 109 128 128 MET MET A . n A 1 110 ASP 110 129 ? ? ? A . n A 1 111 THR 111 130 ? ? ? A . n A 1 112 PRO 112 131 ? ? ? A . n A 1 113 GLU 113 132 ? ? ? A . n A 1 114 GLU 114 133 ? ? ? A . n A 1 115 ASP 115 134 ? ? ? A . n A 1 116 LYS 116 135 ? ? ? A . n A 1 117 SER 117 136 136 SER SER A . n A 1 118 ASP 118 137 137 ASP ASP A . n A 1 119 ALA 119 138 138 ALA ALA A . n A 1 120 ASP 120 139 139 ASP ASP A . n A 1 121 TYR 121 140 140 TYR TYR A . n A 1 122 LEU 122 141 141 LEU LEU A . n A 1 123 GLN 123 142 142 GLN GLN A . n A 1 124 ASN 124 143 143 ASN ASN A . n A 1 125 ILE 125 144 144 ILE ILE A . n A 1 126 THR 126 145 145 THR THR A . n A 1 127 ILE 127 146 146 ILE ILE A . n A 1 128 PRO 128 147 147 PRO PRO A . n A 1 129 SER 129 148 148 SER SER A . n A 1 130 ALA 130 149 149 ALA ALA A . n A 1 131 LEU 131 150 150 LEU LEU A . n A 1 132 ILE 132 151 151 ILE ILE A . n A 1 133 THR 133 152 152 THR THR A . n A 1 134 LYS 134 153 153 LYS LYS A . n A 1 135 THR 135 154 154 THR THR A . n A 1 136 LEU 136 155 155 LEU LEU A . n A 1 137 GLY 137 156 156 GLY GLY A . n A 1 138 ASP 138 157 157 ASP ASP A . n A 1 139 SER 139 158 158 SER SER A . n A 1 140 ILE 140 159 159 ILE ILE A . n A 1 141 LYS 141 160 160 LYS LYS A . n A 1 142 SER 142 161 161 SER SER A . n A 1 143 ALA 143 162 162 ALA ALA A . n A 1 144 LEU 144 163 163 LEU LEU A . n A 1 145 SER 145 164 164 SER SER A . n A 1 146 GLY 146 165 165 GLY GLY A . n A 1 147 GLY 147 166 166 GLY GLY A . n A 1 148 ASP 148 167 167 ASP ASP A . n A 1 149 MET 149 168 168 MET MET A . n A 1 150 VAL 150 169 169 VAL VAL A . n A 1 151 ASN 151 170 170 ASN ASN A . n A 1 152 MET 152 171 171 MET MET A . n A 1 153 LYS 153 172 172 LYS LYS A . n A 1 154 LEU 154 173 173 LEU LEU A . n A 1 155 ASP 155 174 174 ASP ASP A . n A 1 156 TRP 156 175 175 TRP TRP A . n A 1 157 THR 157 176 176 THR THR A . n A 1 158 GLU 158 177 177 GLU GLU A . n A 1 159 SER 159 178 178 SER SER A . n A 1 160 VAL 160 179 179 VAL VAL A . n A 1 161 PRO 161 180 180 PRO PRO A . n A 1 162 HIS 162 181 181 HIS HIS A . n A 1 163 PRO 163 182 182 PRO PRO A . n A 1 164 ASP 164 183 183 ASP ASP A . n A 1 165 GLU 165 184 184 GLU GLU A . n A 1 166 ARG 166 185 185 ARG ARG A . n A 1 167 VAL 167 186 186 VAL VAL A . n A 1 168 GLU 168 187 187 GLU GLU A . n A 1 169 TYR 169 188 188 TYR TYR A . n A 1 170 GLU 170 189 189 GLU GLU A . n A 1 171 LEU 171 190 190 LEU LEU A . n A 1 172 TRP 172 191 191 TRP TRP A . n A 1 173 THR 173 192 192 THR THR A . n A 1 174 ASN 174 193 193 ASN ASN A . n A 1 175 SER 175 194 194 SER SER A . n A 1 176 ASN 176 195 195 ASN ASN A . n A 1 177 ASP 177 196 196 ASP ASP A . n A 1 178 GLU 178 197 197 GLU GLU A . n A 1 179 CYS 179 198 198 CYS CYS A . n A 1 180 GLY 180 199 199 GLY GLY A . n A 1 181 LYS 181 200 200 LYS LYS A . n A 1 182 LYS 182 201 201 LYS LYS A . n A 1 183 CYS 183 202 202 CYS CYS A . n A 1 184 ASP 184 203 203 ASP ASP A . n A 1 185 THR 185 204 204 THR THR A . n A 1 186 GLN 186 205 205 GLN GLN A . n A 1 187 ILE 187 206 206 ILE ILE A . n A 1 188 GLU 188 207 207 GLU GLU A . n A 1 189 PHE 189 208 208 PHE PHE A . n A 1 190 LEU 190 209 209 LEU LEU A . n A 1 191 LYS 191 210 210 LYS LYS A . n A 1 192 ASN 192 211 211 ASN ASN A . n A 1 193 PHE 193 212 212 PHE PHE A . n A 1 194 LYS 194 213 213 LYS LYS A . n A 1 195 GLY 195 214 214 GLY GLY A . n A 1 196 ALA 196 215 215 ALA ALA A . n A 1 197 ALA 197 216 216 ALA ALA A . n A 1 198 GLN 198 217 217 GLN GLN A . n A 1 199 ILE 199 218 218 ILE ILE A . n A 1 200 LEU 200 219 219 LEU LEU A . n A 1 201 GLU 201 220 220 GLU GLU A . n A 1 202 LYS 202 221 221 LYS LYS A . n A 1 203 GLY 203 222 222 GLY GLY A . n A 1 204 GLY 204 223 223 GLY GLY A . n A 1 205 HIS 205 224 224 HIS HIS A . n A 1 206 THR 206 225 225 THR THR A . n A 1 207 GLN 207 226 226 GLN GLN A . n A 1 208 PHE 208 227 227 PHE PHE A . n A 1 209 THR 209 228 228 THR THR A . n A 1 210 PRO 210 229 229 PRO PRO A . n A 1 211 HIS 211 230 230 HIS HIS A . n A 1 212 TYR 212 231 231 TYR TYR A . n A 1 213 ILE 213 232 232 ILE ILE A . n A 1 214 THR 214 233 233 THR THR A . n A 1 215 TRP 215 234 234 TRP TRP A . n A 1 216 TYR 216 235 235 TYR TYR A . n A 1 217 CYS 217 236 236 CYS CYS A . n A 1 218 PRO 218 237 237 PRO PRO A . n A 1 219 GLU 219 238 238 GLU GLU A . n A 1 220 ALA 220 239 239 ALA ALA A . n A 1 221 PHE 221 240 240 PHE PHE A . n A 1 222 THR 222 241 241 THR THR A . n A 1 223 LEU 223 242 242 LEU LEU A . n A 1 224 SER 224 243 243 SER SER A . n A 1 225 LYS 225 244 244 LYS LYS A . n A 1 226 GLN 226 245 245 GLN GLN A . n A 1 227 CYS 227 246 246 CYS CYS A . n A 1 228 LYS 228 247 247 LYS LYS A . n A 1 229 SER 229 248 248 SER SER A . n A 1 230 GLN 230 249 249 GLN GLN A . n A 1 231 CYS 231 250 250 CYS CYS A . n A 1 232 ILE 232 251 251 ILE ILE A . n A 1 233 ASN 233 252 252 ASN ASN A . n A 1 234 HIS 234 253 253 HIS HIS A . n A 1 235 GLY 235 254 254 GLY GLY A . n A 1 236 ARG 236 255 255 ARG ARG A . n A 1 237 TYR 237 256 256 TYR TYR A . n A 1 238 CYS 238 257 257 CYS CYS A . n A 1 239 ALA 239 258 258 ALA ALA A . n A 1 240 PRO 240 259 259 PRO PRO A . n A 1 241 ASP 241 260 260 ASP ASP A . n A 1 242 PRO 242 261 261 PRO PRO A . n A 1 243 GLU 243 262 262 GLU GLU A . n A 1 244 GLN 244 263 263 GLN GLN A . n A 1 245 ASP 245 264 264 ASP ASP A . n A 1 246 PHE 246 265 265 PHE PHE A . n A 1 247 THR 247 266 266 THR THR A . n A 1 248 LYS 248 267 267 LYS LYS A . n A 1 249 GLY 249 268 268 GLY GLY A . n A 1 250 TYR 250 269 269 TYR TYR A . n A 1 251 ASP 251 270 270 ASP ASP A . n A 1 252 GLY 252 271 271 GLY GLY A . n A 1 253 LYS 253 272 272 LYS LYS A . n A 1 254 ASP 254 273 273 ASP ASP A . n A 1 255 VAL 255 274 274 VAL VAL A . n A 1 256 VAL 256 275 275 VAL VAL A . n A 1 257 VAL 257 276 276 VAL VAL A . n A 1 258 GLN 258 277 277 GLN GLN A . n A 1 259 ASN 259 278 278 ASN ASN A . n A 1 260 LEU 260 279 279 LEU LEU A . n A 1 261 ARG 261 280 280 ARG ARG A . n A 1 262 GLN 262 281 281 GLN GLN A . n A 1 263 ALA 263 282 282 ALA ALA A . n A 1 264 CYS 264 283 283 CYS CYS A . n A 1 265 VAL 265 284 284 VAL VAL A . n A 1 266 TYR 266 285 285 TYR TYR A . n A 1 267 ARG 267 286 286 ARG ARG A . n A 1 268 VAL 268 287 287 VAL VAL A . n A 1 269 MET 269 288 288 MET MET A . n A 1 270 ASN 270 289 289 ASN ASN A . n A 1 271 ASP 271 290 290 ASP ASP A . n A 1 272 THR 272 291 291 THR THR A . n A 1 273 GLY 273 292 292 GLY GLY A . n A 1 274 LYS 274 293 293 LYS LYS A . n A 1 275 PRO 275 294 294 PRO PRO A . n A 1 276 TRP 276 295 295 TRP TRP A . n A 1 277 VAL 277 296 296 VAL VAL A . n A 1 278 TRP 278 297 297 TRP TRP A . n A 1 279 TRP 279 298 298 TRP TRP A . n A 1 280 ASP 280 299 299 ASP ASP A . n A 1 281 TYR 281 300 300 TYR TYR A . n A 1 282 VAL 282 301 301 VAL VAL A . n A 1 283 THR 283 302 302 THR THR A . n A 1 284 ASP 284 303 303 ASP ASP A . n A 1 285 PHE 285 304 304 PHE PHE A . n A 1 286 ALA 286 305 305 ALA ALA A . n A 1 287 ILE 287 306 306 ILE ILE A . n A 1 288 ARG 288 307 307 ARG ARG A . n A 1 289 CYS 289 308 308 CYS CYS A . n A 1 290 PRO 290 309 309 PRO PRO A . n A 1 291 MET 291 310 310 MET MET A . n A 1 292 LYS 292 311 311 LYS LYS A . n A 1 293 GLU 293 312 312 GLU GLU A . n A 1 294 LYS 294 313 313 LYS LYS A . n A 1 295 LYS 295 314 314 LYS LYS A . n A 1 296 TYR 296 315 315 TYR TYR A . n A 1 297 THR 297 316 316 THR THR A . n A 1 298 LYS 298 317 317 LYS LYS A . n A 1 299 GLU 299 318 318 GLU GLU A . n A 1 300 CYS 300 319 319 CYS CYS A . n A 1 301 ALA 301 320 320 ALA ALA A . n A 1 302 ASP 302 321 321 ASP ASP A . n A 1 303 GLY 303 322 322 GLY GLY A . n A 1 304 ILE 304 323 323 ILE ILE A . n A 1 305 ILE 305 324 324 ILE ILE A . n A 1 306 LYS 306 325 325 LYS LYS A . n A 1 307 SER 307 326 326 SER SER A . n A 1 308 LEU 308 327 327 LEU LEU A . n A 1 309 GLY 309 328 328 GLY GLY A . n A 1 310 ILE 310 329 329 ILE ILE A . n A 1 311 ASP 311 330 330 ASP ASP A . n A 1 312 LEU 312 331 331 LEU LEU A . n A 1 313 LYS 313 332 332 LYS LYS A . n A 1 314 LYS 314 333 333 LYS LYS A . n A 1 315 VAL 315 334 334 VAL VAL A . n A 1 316 ASP 316 335 335 ASP ASP A . n A 1 317 LYS 317 336 336 LYS LYS A . n A 1 318 CYS 318 337 337 CYS CYS A . n A 1 319 ILE 319 338 338 ILE ILE A . n A 1 320 GLY 320 339 339 GLY GLY A . n A 1 321 ASP 321 340 340 ASP ASP A . n A 1 322 PRO 322 341 341 PRO PRO A . n A 1 323 GLU 323 342 342 GLU GLU A . n A 1 324 ALA 324 343 343 ALA ALA A . n A 1 325 ASP 325 344 344 ASP ASP A . n A 1 326 VAL 326 345 345 VAL VAL A . n A 1 327 GLU 327 346 346 GLU GLU A . n A 1 328 ASN 328 347 347 ASN ASN A . n A 1 329 PRO 329 348 348 PRO PRO A . n A 1 330 VAL 330 349 349 VAL VAL A . n A 1 331 LEU 331 350 350 LEU LEU A . n A 1 332 LYS 332 351 351 LYS LYS A . n A 1 333 ALA 333 352 352 ALA ALA A . n A 1 334 GLU 334 353 353 GLU GLU A . n A 1 335 GLN 335 354 354 GLN GLN A . n A 1 336 GLU 336 355 355 GLU GLU A . n A 1 337 SER 337 356 356 SER SER A . n A 1 338 GLN 338 357 357 GLN GLN A . n A 1 339 ILE 339 358 358 ILE ILE A . n A 1 340 GLY 340 359 359 GLY GLY A . n A 1 341 LYS 341 360 360 LYS LYS A . n A 1 342 GLY 342 361 361 GLY GLY A . n A 1 343 SER 343 362 362 SER SER A . n A 1 344 ARG 344 363 363 ARG ARG A . n A 1 345 GLY 345 364 364 GLY GLY A . n A 1 346 ASP 346 365 365 ASP ASP A . n A 1 347 VAL 347 366 366 VAL VAL A . n A 1 348 THR 348 367 367 THR THR A . n A 1 349 ILE 349 368 368 ILE ILE A . n A 1 350 LEU 350 369 369 LEU LEU A . n A 1 351 PRO 351 370 370 PRO PRO A . n A 1 352 THR 352 371 371 THR THR A . n A 1 353 LEU 353 372 372 LEU LEU A . n A 1 354 VAL 354 373 373 VAL VAL A . n A 1 355 VAL 355 374 374 VAL VAL A . n A 1 356 ASN 356 375 375 ASN ASN A . n A 1 357 ASN 357 376 376 ASN ASN A . n A 1 358 ARG 358 377 377 ARG ARG A . n A 1 359 GLN 359 378 378 GLN GLN A . n A 1 360 TYR 360 379 379 TYR TYR A . n A 1 361 ARG 361 380 380 ARG ARG A . n A 1 362 GLY 362 381 381 GLY GLY A . n A 1 363 LYS 363 382 382 LYS LYS A . n A 1 364 LEU 364 383 383 LEU LEU A . n A 1 365 GLU 365 384 384 GLU GLU A . n A 1 366 LYS 366 385 385 LYS LYS A . n A 1 367 GLY 367 386 386 GLY GLY A . n A 1 368 ALA 368 387 387 ALA ALA A . n A 1 369 VAL 369 388 388 VAL VAL A . n A 1 370 LEU 370 389 389 LEU LEU A . n A 1 371 LYS 371 390 390 LYS LYS A . n A 1 372 ALA 372 391 391 ALA ALA A . n A 1 373 MET 373 392 392 MET MET A . n A 1 374 CYS 374 393 393 CYS CYS A . n A 1 375 SER 375 394 394 SER SER A . n A 1 376 GLY 376 395 395 GLY GLY A . n A 1 377 PHE 377 396 396 PHE PHE A . n A 1 378 GLN 378 397 397 GLN GLN A . n A 1 379 GLU 379 398 398 GLU GLU A . n A 1 380 SER 380 399 399 SER SER A . n A 1 381 THR 381 400 400 THR THR A . n A 1 382 GLU 382 401 401 GLU GLU A . n A 1 383 PRO 383 402 402 PRO PRO A . n A 1 384 ALA 384 403 403 ALA ALA A . n A 1 385 ILE 385 404 404 ILE ILE A . n A 1 386 CYS 386 405 405 CYS CYS A . n A 1 387 LEU 387 406 406 LEU LEU A . n A 1 388 THR 388 407 407 THR THR A . n A 1 389 GLU 389 408 408 GLU GLU A . n A 1 390 ASP 390 409 409 ASP ASP A . n A 1 391 LEU 391 410 410 LEU LEU A . n A 1 392 GLU 392 411 411 GLU GLU A . n A 1 393 THR 393 412 412 THR THR A . n A 1 394 ASN 394 413 413 ASN ASN A . n A 1 395 GLU 395 414 414 GLU GLU A . n A 1 396 CYS 396 415 415 CYS CYS A . n A 1 397 LEU 397 416 416 LEU LEU A . n A 1 398 GLU 398 417 417 GLU GLU A . n A 1 399 ASN 399 418 418 ASN ASN A . n A 1 400 ASN 400 419 419 ASN ASN A . n A 1 401 GLY 401 420 420 GLY GLY A . n A 1 402 GLY 402 421 421 GLY GLY A . n A 1 403 CYS 403 422 422 CYS CYS A . n A 1 404 TRP 404 423 423 TRP TRP A . n A 1 405 GLN 405 424 424 GLN GLN A . n A 1 406 ASP 406 425 425 ASP ASP A . n A 1 407 LYS 407 426 426 LYS LYS A . n A 1 408 ALA 408 427 427 ALA ALA A . n A 1 409 ALA 409 428 428 ALA ALA A . n A 1 410 ASN 410 429 429 ASN ASN A . n A 1 411 ILE 411 430 430 ILE ILE A . n A 1 412 THR 412 431 431 THR THR A . n A 1 413 ALA 413 432 432 ALA ALA A . n A 1 414 CYS 414 433 433 CYS CYS A . n A 1 415 ARG 415 434 434 ARG ARG A . n A 1 416 ASP 416 435 435 ASP ASP A . n A 1 417 THR 417 436 436 THR THR A . n A 1 418 PHE 418 437 437 PHE PHE A . n A 1 419 ARG 419 438 438 ARG ARG A . n A 1 420 GLY 420 439 439 GLY GLY A . n A 1 421 ARG 421 440 440 ARG ARG A . n A 1 422 LEU 422 441 441 LEU LEU A . n A 1 423 CYS 423 442 442 CYS CYS A . n A 1 424 GLU 424 443 443 GLU GLU A . n A 1 425 CYS 425 444 444 CYS CYS A . n A 1 426 PRO 426 445 445 PRO PRO A . n A 1 427 THR 427 446 446 THR THR A . n A 1 428 VAL 428 447 447 VAL VAL A . n A 1 429 GLN 429 448 448 GLN GLN A . n A 1 430 GLY 430 449 449 GLY GLY A . n A 1 431 VAL 431 450 450 VAL VAL A . n A 1 432 LYS 432 451 451 LYS LYS A . n A 1 433 PHE 433 452 452 PHE PHE A . n A 1 434 VAL 434 453 453 VAL VAL A . n A 1 435 GLY 435 454 454 GLY GLY A . n A 1 436 ASP 436 455 455 ASP ASP A . n A 1 437 GLY 437 456 456 GLY GLY A . n A 1 438 TYR 438 457 457 TYR TYR A . n A 1 439 THR 439 458 458 THR THR A . n A 1 440 HIS 440 459 459 HIS HIS A . n A 1 441 CYS 441 460 460 CYS CYS A . n A 1 442 LYS 442 461 461 LYS LYS A . n A 1 443 ALA 443 462 462 ALA ALA A . n A 1 444 SER 444 463 ? ? ? A . n A 1 445 GLY 445 464 ? ? ? A . n A 1 446 ALA 446 465 ? ? ? A . n A 1 447 LEU 447 466 ? ? ? A . n A 1 448 HIS 448 467 ? ? ? A . n A 1 449 CYS 449 468 ? ? ? A . n A 1 450 GLY 450 469 ? ? ? A . n A 1 451 ILE 451 470 ? ? ? A . n A 1 452 ASN 452 471 ? ? ? A . n A 1 453 ASN 453 472 ? ? ? A . n A 1 454 GLY 454 473 ? ? ? A . n A 1 455 GLY 455 474 ? ? ? A . n A 1 456 CYS 456 475 ? ? ? A . n A 1 457 TRP 457 476 ? ? ? A . n A 1 458 ARG 458 477 ? ? ? A . n A 1 459 GLU 459 478 ? ? ? A . n A 1 460 SER 460 479 ? ? ? A . n A 1 461 ARG 461 480 ? ? ? A . n A 1 462 GLY 462 481 ? ? ? A . n A 1 463 GLY 463 482 ? ? ? A . n A 1 464 PHE 464 483 ? ? ? A . n A 1 465 THR 465 484 ? ? ? A . n A 1 466 TYR 466 485 ? ? ? A . n A 1 467 SER 467 486 ? ? ? A . n A 1 468 ALA 468 487 ? ? ? A . n A 1 469 CYS 469 488 ? ? ? A . n A 1 470 VAL 470 489 ? ? ? A . n A 1 471 ASP 471 490 ? ? ? A . n A 1 472 ASP 472 491 ? ? ? A . n A 1 473 HIS 473 492 ? ? ? A . n A 1 474 SER 474 493 ? ? ? A . n A 1 475 LYS 475 494 ? ? ? A . n A 1 476 ASP 476 495 ? ? ? A . n A 1 477 CYS 477 496 ? ? ? A . n A 1 478 LYS 478 497 ? ? ? A . n A 1 479 CYS 479 498 ? ? ? A . n A 1 480 PRO 480 499 ? ? ? A . n A 1 481 LEU 481 500 ? ? ? A . n A 1 482 GLY 482 501 ? ? ? A . n A 1 483 PHE 483 502 ? ? ? A . n A 1 484 LYS 484 503 ? ? ? A . n A 1 485 GLY 485 504 ? ? ? A . n A 1 486 ASP 486 505 ? ? ? A . n A 1 487 GLY 487 506 ? ? ? A . n A 1 488 VAL 488 507 ? ? ? A . n A 1 489 LYS 489 508 ? ? ? A . n A 1 490 ASN 490 509 ? ? ? A . n A 1 491 CYS 491 510 ? ? ? A . n A 1 492 GLU 492 511 ? ? ? A . n A 1 493 ASP 493 512 ? ? ? A . n A 1 494 VAL 494 513 ? ? ? A . n A 1 495 ASP 495 514 ? ? ? A . n A 1 496 GLU 496 515 ? ? ? A . n A 1 497 CYS 497 516 ? ? ? A . n A 1 498 LYS 498 517 ? ? ? A . n A 1 499 GLU 499 518 ? ? ? A . n A 1 500 LYS 500 519 ? ? ? A . n A 1 501 THR 501 520 ? ? ? A . n A 1 502 VAL 502 521 ? ? ? A . n A 1 503 CYS 503 522 ? ? ? A . n A 1 504 GLN 504 523 ? ? ? A . n A 1 505 CYS 505 524 ? ? ? A . n A 1 506 PRO 506 525 ? ? ? A . n A 1 507 GLU 507 526 ? ? ? A . n A 1 508 CYS 508 527 ? ? ? A . n A 1 509 LYS 509 528 ? ? ? A . n A 1 510 CYS 510 529 ? ? ? A . n A 1 511 LYS 511 530 ? ? ? A . n A 1 512 ASN 512 531 ? ? ? A . n A 1 513 THR 513 532 ? ? ? A . n A 1 514 TRP 514 533 ? ? ? A . n A 1 515 GLY 515 534 ? ? ? A . n A 1 516 SER 516 535 ? ? ? A . n A 1 517 TYR 517 536 ? ? ? A . n A 1 518 GLU 518 537 ? ? ? A . n A 1 519 CYS 519 538 ? ? ? A . n A 1 520 SER 520 539 ? ? ? A . n A 1 521 CYS 521 540 ? ? ? A . n A 1 522 SER 522 541 ? ? ? A . n A 1 523 ASN 523 542 ? ? ? A . n A 1 524 GLY 524 543 ? ? ? A . n A 1 525 LEU 525 544 ? ? ? A . n A 1 526 LEU 526 545 ? ? ? A . n A 1 527 TYR 527 546 ? ? ? A . n A 1 528 MET 528 547 ? ? ? A . n A 1 529 ARG 529 548 ? ? ? A . n A 1 530 GLU 530 549 ? ? ? A . n A 1 531 HIS 531 550 ? ? ? A . n A 1 532 ASP 532 551 ? ? ? A . n A 1 533 THR 533 552 ? ? ? A . n A 1 534 CYS 534 553 ? ? ? A . n A 1 535 ILE 535 554 ? ? ? A . n A 1 536 GLY 536 555 ? ? ? A . n A 1 537 SER 537 556 ? ? ? A . n A 1 538 GLY 538 557 ? ? ? A . n A 1 539 LYS 539 558 ? ? ? A . n A 1 540 VAL 540 559 ? ? ? A . n A 1 541 GLY 541 560 ? ? ? A . n A 1 542 THR 542 561 ? ? ? A . n A 1 543 THR 543 562 ? ? ? A . n A 1 544 LYS 544 563 ? ? ? A . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 B NAG 1 n B 2 NAG 2 B NAG 2 B NAG 2 n B 2 BMA 3 B BMA 3 B BMA 3 n B 2 MAN 4 B MAN 4 B MAN 4 n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 BMA ? ? BMA ? ? 'SUBJECT OF INVESTIGATION' ? 2 MAN ? ? MAN ? ? 'SUBJECT OF INVESTIGATION' ? 3 NAG ? ? NAG ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MAN 1 601 601 MAN MAN A . D 4 NAG 1 602 602 NAG NAG A . E 4 NAG 1 603 603 NAG NAG A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 25 ? CG ? A LYS 6 CG 2 1 Y 1 A LYS 25 ? CD ? A LYS 6 CD 3 1 Y 1 A LYS 25 ? CE ? A LYS 6 CE 4 1 Y 1 A LYS 25 ? NZ ? A LYS 6 NZ 5 1 Y 1 A GLU 41 ? CG ? A GLU 22 CG 6 1 Y 1 A GLU 41 ? CD ? A GLU 22 CD 7 1 Y 1 A GLU 41 ? OE1 ? A GLU 22 OE1 8 1 Y 1 A GLU 41 ? OE2 ? A GLU 22 OE2 9 1 Y 1 A PHE 47 ? CG ? A PHE 28 CG 10 1 Y 1 A PHE 47 ? CD1 ? A PHE 28 CD1 11 1 Y 1 A PHE 47 ? CD2 ? A PHE 28 CD2 12 1 Y 1 A PHE 47 ? CE1 ? A PHE 28 CE1 13 1 Y 1 A PHE 47 ? CE2 ? A PHE 28 CE2 14 1 Y 1 A PHE 47 ? CZ ? A PHE 28 CZ 15 1 Y 1 A LEU 125 ? CB ? A LEU 106 CB 16 1 Y 1 A LEU 125 ? CG ? A LEU 106 CG 17 1 Y 1 A LEU 125 ? CD1 ? A LEU 106 CD1 18 1 Y 1 A LEU 125 ? CD2 ? A LEU 106 CD2 19 1 Y 1 A LEU 406 ? CG ? A LEU 387 CG 20 1 Y 1 A LEU 406 ? CD1 ? A LEU 387 CD1 21 1 Y 1 A LEU 406 ? CD2 ? A LEU 387 CD2 22 1 Y 1 A GLU 408 ? CG ? A GLU 389 CG 23 1 Y 1 A GLU 408 ? CD ? A GLU 389 CD 24 1 Y 1 A GLU 408 ? OE1 ? A GLU 389 OE1 25 1 Y 1 A GLU 408 ? OE2 ? A GLU 389 OE2 26 1 N 1 A MAN 601 ? O1 ? C MAN 1 O1 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_reference_DOI _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.21.2_5419 ? 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 20180409 ? 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 20180409 ? 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? Arcimboldo ? ? ? . ? 4 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? 0.9.6 ? 5 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . ? 6 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . ? 7 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . ? 8 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8R4Y _cell.details ? _cell.formula_units_Z ? _cell.length_a 141.477 _cell.length_a_esd ? _cell.length_b 141.477 _cell.length_b_esd ? _cell.length_c 141.477 _cell.length_c_esd ? _cell.volume 2831767.064 _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8R4Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 198 _symmetry.space_group_name_Hall 'P 2ac 2ab 3' _symmetry.space_group_name_H-M 'P 21 3' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8R4Y _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.93 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 68.73 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M Tris pH 8.0, 20% v/v glycerol ethoxylate, 10% v/v tetrahydrofuran' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 277.15 # loop_ _diffrn.ambient_environment _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.ambient_temp_esd _diffrn.crystal_id _diffrn.crystal_support _diffrn.crystal_treatment _diffrn.details _diffrn.id _diffrn.ambient_pressure _diffrn.ambient_pressure_esd _diffrn.ambient_pressure_gt _diffrn.ambient_pressure_lt _diffrn.ambient_temp_gt _diffrn.ambient_temp_lt _diffrn.pdbx_serial_crystal_experiment ? 100 ? ? 1 ? ? ? 1 ? ? ? ? ? ? N ? 100 ? ? 1 ? ? ? 2 ? ? ? ? ? ? N # loop_ _diffrn_detector.details _diffrn_detector.detector _diffrn_detector.diffrn_id _diffrn_detector.type _diffrn_detector.area_resol_mean _diffrn_detector.dtime _diffrn_detector.pdbx_frames_total _diffrn_detector.pdbx_collection_time_total _diffrn_detector.pdbx_collection_date _diffrn_detector.pdbx_frequency _diffrn_detector.id _diffrn_detector.number_of_axes ? PIXEL 1 'DECTRIS PILATUS3 6M' ? ? ? ? 2019-07-18 ? ? ? ? PIXEL 2 'DECTRIS PILATUS 12M' ? ? ? ? 2024-06-28 ? ? ? # loop_ _diffrn_radiation.collimation _diffrn_radiation.diffrn_id _diffrn_radiation.filter_edge _diffrn_radiation.inhomogeneity _diffrn_radiation.monochromator _diffrn_radiation.polarisn_norm _diffrn_radiation.polarisn_ratio _diffrn_radiation.probe _diffrn_radiation.type _diffrn_radiation.xray_symbol _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.pdbx_wavelength_list _diffrn_radiation.pdbx_wavelength _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_analyzer _diffrn_radiation.pdbx_scattering_type ? 1 ? ? ? ? ? ? ? ? 1 M ? ? 'SINGLE WAVELENGTH' ? x-ray ? 2 ? ? ? ? ? ? ? ? 2 M ? ? 'SINGLE WAVELENGTH' ? x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9796 1.0 2 3.024 1.0 # loop_ _diffrn_source.current _diffrn_source.details _diffrn_source.diffrn_id _diffrn_source.power _diffrn_source.size _diffrn_source.source _diffrn_source.target _diffrn_source.type _diffrn_source.voltage _diffrn_source.take-off_angle _diffrn_source.pdbx_wavelength_list _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_synchrotron_site ? ? 1 ? ? SYNCHROTRON ? 'DIAMOND BEAMLINE I03' ? ? 0.9796 ? I03 Diamond ? ? 2 ? ? SYNCHROTRON ? 'DIAMOND BEAMLINE I23' ? ? 3.024 ? I23 Diamond # _reflns.B_iso_Wilson_estimate 137.53 _reflns.entry_id 8R4Y _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.51 _reflns.d_resolution_low 49.96 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 12055 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 16.0 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 30.14 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 3.51 _reflns_shell.d_res_low 3.72 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1908 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 28.80 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.301 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 98.8 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 133.92 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8R4Y _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.51 _refine.ls_d_res_low 47.16 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 12032 _refine.ls_number_reflns_R_free 602 _refine.ls_number_reflns_R_work 11430 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.61 _refine.ls_percent_reflns_R_free 5.00 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2566 _refine.ls_R_factor_R_free 0.2723 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2558 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'AB INITIO PHASING' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 34.7215 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.6607 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 3.51 _refine_hist.d_res_low 47.16 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 3454 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 3365 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 89 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0026 ? 3547 ? f_bond_d ? ? ? 'X-RAY DIFFRACTION' ? 0.4885 ? 4811 ? f_angle_d ? ? ? 'X-RAY DIFFRACTION' ? 0.0416 ? 549 ? f_chiral_restr ? ? ? 'X-RAY DIFFRACTION' ? 0.0037 ? 614 ? f_plane_restr ? ? ? 'X-RAY DIFFRACTION' ? 10.5499 ? 1389 ? f_dihedral_angle_d ? ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.correlation_coeff_Fo_to_Fc _refine_ls_shell.correlation_coeff_Fo_to_Fc_free _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 3.51 3.86 . . 146 2784 98.52 . . . . 0.3697 . . . . . . . . . . . . . . . 0.4341 'X-RAY DIFFRACTION' 3.86 4.42 . . 150 2847 100.00 . . . . 0.3000 . . . . . . . . . . . . . . . 0.3049 'X-RAY DIFFRACTION' 4.43 5.57 . . 150 2845 99.93 . . . . 0.2626 . . . . . . . . . . . . . . . 0.2453 'X-RAY DIFFRACTION' 5.57 47.16 . . 156 2954 99.97 . . . . 0.2190 . . . . . . . . . . . . . . . 0.2468 # _struct.entry_id 8R4Y _struct.title 'Homotrimer for the lumenal domain of Vacuolar Sorting Receptor 1 (VSR1)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8R4Y _struct_keywords.text 'Vacuolar sorting receptor; membrane protein, PROTEIN TRANSPORT' _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code VSR1_ARATH _struct_ref.pdbx_db_accession P93026 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;RFVVEKNNLKVTSPDSIKGIYECAIGNFGVPQYGGTLVGTVVYPKSNQKACKSYSDFDISFKSKPGRLPTFVLIDRGDCY FTLKAWIAQQAGAAAILVADSKAEPLITMDTPEEDKSDADYLQNITIPSALITKTLGDSIKSALSGGDMVNMKLDWTESV PHPDERVEYELWTNSNDECGKKCDTQIEFLKNFKGAAQILEKGGHTQFTPHYITWYCPEAFTLSKQCKSQCINHGRYCAP DPEQDFTKGYDGKDVVVQNLRQACVYRVMNDTGKPWVWWDYVTDFAIRCPMKEKKYTKECADGIIKSLGIDLKKVDKCIG DPEADVENPVLKAEQESQIGKGSRGDVTILPTLVVNNRQYRGKLEKGAVLKAMCSGFQESTEPAICLTEDLETNECLENN GGCWQDKAANITACRDTFRGRLCECPTVQGVKFVGDGYTHCKASGALHCGINNGGCWRESRGGFTYSACVDDHSKDCKCP LGFKGDGVKNCEDVDECKEKTVCQCPECKCKNTWGSYECSCSNGLLYMREHDTCIGSGKVGTTK ; _struct_ref.pdbx_align_begin 20 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8R4Y _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 544 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P93026 _struct_ref_seq.db_align_beg 20 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 563 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 20 _struct_ref_seq.pdbx_auth_seq_align_end 563 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 11810 ? 1 MORE 6 ? 1 'SSA (A^2)' 63540 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ;Kim et al 2010 show with gel filtration column chromatography, chemical cross-linking and coimmunoprecipitation experiments that the VSR1 behaves as a trimer. ; # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_555 z,x,y 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 3 'crystal symmetry operation' 9_555 y,z,x 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 14 ? LYS A 18 ? PRO A 33 LYS A 37 5 ? 5 HELX_P HELX_P2 AA2 TYR A 80 ? ALA A 91 ? TYR A 99 ALA A 110 1 ? 12 HELX_P HELX_P3 AA3 THR A 133 ? GLY A 146 ? THR A 152 GLY A 165 1 ? 14 HELX_P HELX_P4 AA4 GLY A 180 ? GLY A 203 ? GLY A 199 GLY A 222 1 ? 24 HELX_P HELX_P5 AA5 PRO A 218 ? THR A 222 ? PRO A 237 THR A 241 5 ? 5 HELX_P HELX_P6 AA6 SER A 224 ? GLN A 230 ? SER A 243 GLN A 249 1 ? 7 HELX_P HELX_P7 AA7 TYR A 250 ? GLY A 273 ? TYR A 269 GLY A 292 1 ? 24 HELX_P HELX_P8 AA8 TRP A 276 ? CYS A 289 ? TRP A 295 CYS A 308 1 ? 14 HELX_P HELX_P9 AA9 THR A 297 ? LEU A 308 ? THR A 316 LEU A 327 1 ? 12 HELX_P HELX_P10 AB1 ASP A 311 ? GLY A 320 ? ASP A 330 GLY A 339 1 ? 10 HELX_P HELX_P11 AB2 ASN A 328 ? GLN A 338 ? ASN A 347 GLN A 357 1 ? 11 HELX_P HELX_P12 AB3 GLU A 365 ? CYS A 374 ? GLU A 384 CYS A 393 1 ? 10 HELX_P HELX_P13 AB4 ASN A 394 ? CYS A 403 ? ASN A 413 CYS A 422 5 ? 10 HELX_P HELX_P14 AB5 LYS A 407 ? ASN A 410 ? LYS A 426 ASN A 429 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 51 SG A ? ? 1_555 A CYS 79 SG A ? A CYS 70 A CYS 98 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf2 disulf ? ? A CYS 179 SG ? ? ? 1_555 A CYS 183 SG A ? A CYS 198 A CYS 202 1_555 ? ? ? ? ? ? ? 2.045 ? ? disulf3 disulf ? ? A CYS 217 SG A ? ? 1_555 A CYS 227 SG A ? A CYS 236 A CYS 246 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf4 disulf ? ? A CYS 217 SG B ? ? 1_555 A CYS 227 SG B ? A CYS 236 A CYS 246 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf5 disulf ? ? A CYS 231 SG ? ? ? 1_555 A CYS 238 SG ? ? A CYS 250 A CYS 257 1_555 ? ? ? ? ? ? ? 2.025 ? ? disulf6 disulf ? ? A CYS 264 SG ? ? ? 1_555 A CYS 318 SG ? ? A CYS 283 A CYS 337 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf7 disulf ? ? A CYS 289 SG ? ? ? 1_555 A CYS 300 SG A ? A CYS 308 A CYS 319 1_555 ? ? ? ? ? ? ? 2.043 ? ? disulf8 disulf ? ? A CYS 374 SG ? ? ? 1_555 A CYS 386 SG ? ? A CYS 393 A CYS 405 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf9 disulf ? ? A CYS 396 SG ? ? ? 1_555 A CYS 414 SG ? ? A CYS 415 A CYS 433 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf10 disulf ? ? A CYS 403 SG ? ? ? 1_555 A CYS 423 SG ? ? A CYS 422 A CYS 442 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf11 disulf ? ? A CYS 425 SG ? ? ? 1_555 A CYS 441 SG ? ? A CYS 444 A CYS 460 1_555 ? ? ? ? ? ? ? 2.032 ? ? covale1 covale one ? A ASN 124 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 143 A NAG 603 1_555 ? ? ? ? ? ? ? 1.443 ? N-Glycosylation covale2 covale one ? A ASN 270 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 289 B NAG 1 1_555 ? ? ? ? ? ? ? 1.439 ? N-Glycosylation covale3 covale one ? A ASN 410 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 429 A NAG 602 1_555 ? ? ? ? ? ? ? 1.442 ? N-Glycosylation covale4 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.441 ? ? covale5 covale both ? B NAG . O4 ? ? ? 1_555 B BMA . C1 ? ? B NAG 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.442 ? ? covale6 covale both ? B BMA . O3 ? ? ? 1_555 B MAN . C1 ? ? B BMA 3 B MAN 4 1_555 ? ? ? ? ? ? ? 1.451 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG B . ? ASN A 270 ? NAG B 1 ? 1_555 ASN A 289 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 NAG D . ? ASN A 410 ? NAG A 602 ? 1_555 ASN A 429 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 3 NAG E . ? ASN A 124 ? NAG A 603 ? 1_555 ASN A 143 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 4 CYS A 51 A CYS A 79 A CYS A 70 ? 1_555 CYS A 98 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS A 179 ? CYS A 183 A CYS A 198 ? 1_555 CYS A 202 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS A 217 A CYS A 227 A CYS A 236 ? 1_555 CYS A 246 ? 1_555 SG SG . . . None 'Disulfide bridge' 7 CYS A 217 B CYS A 227 B CYS A 236 ? 1_555 CYS A 246 ? 1_555 SG SG . . . None 'Disulfide bridge' 8 CYS A 231 ? CYS A 238 ? CYS A 250 ? 1_555 CYS A 257 ? 1_555 SG SG . . . None 'Disulfide bridge' 9 CYS A 264 ? CYS A 318 ? CYS A 283 ? 1_555 CYS A 337 ? 1_555 SG SG . . . None 'Disulfide bridge' 10 CYS A 289 ? CYS A 300 A CYS A 308 ? 1_555 CYS A 319 ? 1_555 SG SG . . . None 'Disulfide bridge' 11 CYS A 374 ? CYS A 386 ? CYS A 393 ? 1_555 CYS A 405 ? 1_555 SG SG . . . None 'Disulfide bridge' 12 CYS A 396 ? CYS A 414 ? CYS A 415 ? 1_555 CYS A 433 ? 1_555 SG SG . . . None 'Disulfide bridge' 13 CYS A 403 ? CYS A 423 ? CYS A 422 ? 1_555 CYS A 442 ? 1_555 SG SG . . . None 'Disulfide bridge' 14 CYS A 425 ? CYS A 441 ? CYS A 444 ? 1_555 CYS A 460 ? 1_555 SG SG . . . None 'Disulfide bridge' # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 13 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 32 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 14 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 33 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.19 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 8 ? AA2 ? 4 ? AA3 ? 2 ? AA4 ? 2 ? AA5 ? 2 ? AA6 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? anti-parallel AA6 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PHE A 2 ? SER A 13 ? PHE A 21 SER A 32 AA1 2 GLY A 19 ? GLY A 26 ? GLY A 38 GLY A 45 AA1 3 SER A 129 ? ILE A 132 ? SER A 148 ILE A 151 AA1 4 ALA A 95 ? ALA A 99 ? ALA A 114 ALA A 118 AA1 5 THR A 70 ? ASP A 75 ? THR A 89 ASP A 94 AA1 6 LEU A 37 ? VAL A 42 ? LEU A 56 VAL A 61 AA1 7 ASN A 151 ? LEU A 154 ? ASN A 170 LEU A 173 AA1 8 PHE A 2 ? SER A 13 ? PHE A 21 SER A 32 AA2 1 THR A 206 ? HIS A 211 ? THR A 225 HIS A 230 AA2 2 VAL A 167 ? TRP A 172 ? VAL A 186 TRP A 191 AA2 3 THR A 352 ? VAL A 355 ? THR A 371 VAL A 374 AA2 4 ARG A 358 ? TYR A 360 ? ARG A 377 TYR A 379 AA3 1 CYS A 231 ? ILE A 232 ? CYS A 250 ILE A 251 AA3 2 TYR A 237 ? CYS A 238 ? TYR A 256 CYS A 257 AA4 1 GLN A 405 ? ASP A 406 ? GLN A 424 ASP A 425 AA4 2 ILE A 411 ? THR A 412 ? ILE A 430 THR A 431 AA5 1 CYS A 414 ? THR A 417 ? CYS A 433 THR A 436 AA5 2 GLY A 420 ? CYS A 423 ? GLY A 439 CYS A 442 AA6 1 THR A 427 ? VAL A 428 ? THR A 446 VAL A 447 AA6 2 VAL A 431 ? LYS A 432 ? VAL A 450 LYS A 451 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLU A 5 ? N GLU A 24 O CYS A 23 ? O CYS A 42 AA1 2 3 N ALA A 24 ? N ALA A 43 O LEU A 131 ? O LEU A 150 AA1 3 4 O ILE A 132 ? O ILE A 151 N VAL A 98 ? N VAL A 117 AA1 4 5 O LEU A 97 ? O LEU A 116 N VAL A 72 ? N VAL A 91 AA1 5 6 O PHE A 71 ? O PHE A 90 N THR A 40 ? N THR A 59 AA1 6 7 N GLY A 39 ? N GLY A 58 O MET A 152 ? O MET A 171 AA1 7 8 O LYS A 153 ? O LYS A 172 N LYS A 10 ? N LYS A 29 AA2 1 2 O HIS A 211 ? O HIS A 230 N LEU A 171 ? N LEU A 190 AA2 2 3 N GLU A 170 ? N GLU A 189 O VAL A 354 ? O VAL A 373 AA2 3 4 N VAL A 355 ? N VAL A 374 O ARG A 358 ? O ARG A 377 AA3 1 2 N ILE A 232 ? N ILE A 251 O TYR A 237 ? O TYR A 256 AA4 1 2 N ASP A 406 ? N ASP A 425 O ILE A 411 ? O ILE A 430 AA5 1 2 N ARG A 415 ? N ARG A 434 O LEU A 422 ? O LEU A 441 AA6 1 2 N VAL A 428 ? N VAL A 447 O VAL A 431 ? O VAL A 450 # _pdbx_entry_details.entry_id 8R4Y _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 81 ? ? 48.08 74.21 2 1 ASP A 97 ? ? 70.91 -11.88 3 1 THR A 176 ? ? 71.26 -41.11 4 1 SER A 178 ? ? -69.15 0.55 5 1 VAL A 179 ? ? 56.81 83.61 6 1 ARG A 185 ? ? -127.32 -161.27 7 1 ALA A 258 ? ? -170.94 143.68 8 1 GLN A 263 ? ? 67.91 -2.07 9 1 PHE A 265 ? ? 72.20 -50.06 10 1 ASP A 270 ? ? 67.60 149.54 11 1 LYS A 313 ? ? 58.24 18.55 12 1 LYS A 360 ? ? -107.71 65.90 13 1 LEU A 406 ? ? -84.68 48.69 14 1 ASN A 413 ? ? -141.73 29.19 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 z,x,y 3 y,z,x 4 -y+1/2,-z,x+1/2 5 z+1/2,-x+1/2,-y 6 -y,z+1/2,-x+1/2 7 -z+1/2,-x,y+1/2 8 -z,x+1/2,-y+1/2 9 y+1/2,-z+1/2,-x 10 x+1/2,-y+1/2,-z 11 -x,y+1/2,-z+1/2 12 -x+1/2,-y,z+1/2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 129 ? A ASP 110 2 1 Y 1 A THR 130 ? A THR 111 3 1 Y 1 A PRO 131 ? A PRO 112 4 1 Y 1 A GLU 132 ? A GLU 113 5 1 Y 1 A GLU 133 ? A GLU 114 6 1 Y 1 A ASP 134 ? A ASP 115 7 1 Y 1 A LYS 135 ? A LYS 116 8 1 Y 1 A SER 463 ? A SER 444 9 1 Y 1 A GLY 464 ? A GLY 445 10 1 Y 1 A ALA 465 ? A ALA 446 11 1 Y 1 A LEU 466 ? A LEU 447 12 1 Y 1 A HIS 467 ? A HIS 448 13 1 Y 1 A CYS 468 ? A CYS 449 14 1 Y 1 A GLY 469 ? A GLY 450 15 1 Y 1 A ILE 470 ? A ILE 451 16 1 Y 1 A ASN 471 ? A ASN 452 17 1 Y 1 A ASN 472 ? A ASN 453 18 1 Y 1 A GLY 473 ? A GLY 454 19 1 Y 1 A GLY 474 ? A GLY 455 20 1 Y 1 A CYS 475 ? A CYS 456 21 1 Y 1 A TRP 476 ? A TRP 457 22 1 Y 1 A ARG 477 ? A ARG 458 23 1 Y 1 A GLU 478 ? A GLU 459 24 1 Y 1 A SER 479 ? A SER 460 25 1 Y 1 A ARG 480 ? A ARG 461 26 1 Y 1 A GLY 481 ? A GLY 462 27 1 Y 1 A GLY 482 ? A GLY 463 28 1 Y 1 A PHE 483 ? A PHE 464 29 1 Y 1 A THR 484 ? A THR 465 30 1 Y 1 A TYR 485 ? A TYR 466 31 1 Y 1 A SER 486 ? A SER 467 32 1 Y 1 A ALA 487 ? A ALA 468 33 1 Y 1 A CYS 488 ? A CYS 469 34 1 Y 1 A VAL 489 ? A VAL 470 35 1 Y 1 A ASP 490 ? A ASP 471 36 1 Y 1 A ASP 491 ? A ASP 472 37 1 Y 1 A HIS 492 ? A HIS 473 38 1 Y 1 A SER 493 ? A SER 474 39 1 Y 1 A LYS 494 ? A LYS 475 40 1 Y 1 A ASP 495 ? A ASP 476 41 1 Y 1 A CYS 496 ? A CYS 477 42 1 Y 1 A LYS 497 ? A LYS 478 43 1 Y 1 A CYS 498 ? A CYS 479 44 1 Y 1 A PRO 499 ? A PRO 480 45 1 Y 1 A LEU 500 ? A LEU 481 46 1 Y 1 A GLY 501 ? A GLY 482 47 1 Y 1 A PHE 502 ? A PHE 483 48 1 Y 1 A LYS 503 ? A LYS 484 49 1 Y 1 A GLY 504 ? A GLY 485 50 1 Y 1 A ASP 505 ? A ASP 486 51 1 Y 1 A GLY 506 ? A GLY 487 52 1 Y 1 A VAL 507 ? A VAL 488 53 1 Y 1 A LYS 508 ? A LYS 489 54 1 Y 1 A ASN 509 ? A ASN 490 55 1 Y 1 A CYS 510 ? A CYS 491 56 1 Y 1 A GLU 511 ? A GLU 492 57 1 Y 1 A ASP 512 ? A ASP 493 58 1 Y 1 A VAL 513 ? A VAL 494 59 1 Y 1 A ASP 514 ? A ASP 495 60 1 Y 1 A GLU 515 ? A GLU 496 61 1 Y 1 A CYS 516 ? A CYS 497 62 1 Y 1 A LYS 517 ? A LYS 498 63 1 Y 1 A GLU 518 ? A GLU 499 64 1 Y 1 A LYS 519 ? A LYS 500 65 1 Y 1 A THR 520 ? A THR 501 66 1 Y 1 A VAL 521 ? A VAL 502 67 1 Y 1 A CYS 522 ? A CYS 503 68 1 Y 1 A GLN 523 ? A GLN 504 69 1 Y 1 A CYS 524 ? A CYS 505 70 1 Y 1 A PRO 525 ? A PRO 506 71 1 Y 1 A GLU 526 ? A GLU 507 72 1 Y 1 A CYS 527 ? A CYS 508 73 1 Y 1 A LYS 528 ? A LYS 509 74 1 Y 1 A CYS 529 ? A CYS 510 75 1 Y 1 A LYS 530 ? A LYS 511 76 1 Y 1 A ASN 531 ? A ASN 512 77 1 Y 1 A THR 532 ? A THR 513 78 1 Y 1 A TRP 533 ? A TRP 514 79 1 Y 1 A GLY 534 ? A GLY 515 80 1 Y 1 A SER 535 ? A SER 516 81 1 Y 1 A TYR 536 ? A TYR 517 82 1 Y 1 A GLU 537 ? A GLU 518 83 1 Y 1 A CYS 538 ? A CYS 519 84 1 Y 1 A SER 539 ? A SER 520 85 1 Y 1 A CYS 540 ? A CYS 521 86 1 Y 1 A SER 541 ? A SER 522 87 1 Y 1 A ASN 542 ? A ASN 523 88 1 Y 1 A GLY 543 ? A GLY 524 89 1 Y 1 A LEU 544 ? A LEU 525 90 1 Y 1 A LEU 545 ? A LEU 526 91 1 Y 1 A TYR 546 ? A TYR 527 92 1 Y 1 A MET 547 ? A MET 528 93 1 Y 1 A ARG 548 ? A ARG 529 94 1 Y 1 A GLU 549 ? A GLU 530 95 1 Y 1 A HIS 550 ? A HIS 531 96 1 Y 1 A ASP 551 ? A ASP 532 97 1 Y 1 A THR 552 ? A THR 533 98 1 Y 1 A CYS 553 ? A CYS 534 99 1 Y 1 A ILE 554 ? A ILE 535 100 1 Y 1 A GLY 555 ? A GLY 536 101 1 Y 1 A SER 556 ? A SER 537 102 1 Y 1 A GLY 557 ? A GLY 538 103 1 Y 1 A LYS 558 ? A LYS 539 104 1 Y 1 A VAL 559 ? A VAL 540 105 1 Y 1 A GLY 560 ? A GLY 541 106 1 Y 1 A THR 561 ? A THR 542 107 1 Y 1 A THR 562 ? A THR 543 108 1 Y 1 A LYS 563 ? A LYS 544 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 CYS N N N N 98 CYS CA C N R 99 CYS C C N N 100 CYS O O N N 101 CYS CB C N N 102 CYS SG S N N 103 CYS OXT O N N 104 CYS H H N N 105 CYS H2 H N N 106 CYS HA H N N 107 CYS HB2 H N N 108 CYS HB3 H N N 109 CYS HG H N N 110 CYS HXT H N N 111 GLN N N N N 112 GLN CA C N S 113 GLN C C N N 114 GLN O O N N 115 GLN CB C N N 116 GLN CG C N N 117 GLN CD C N N 118 GLN OE1 O N N 119 GLN NE2 N N N 120 GLN OXT O N N 121 GLN H H N N 122 GLN H2 H N N 123 GLN HA H N N 124 GLN HB2 H N N 125 GLN HB3 H N N 126 GLN HG2 H N N 127 GLN HG3 H N N 128 GLN HE21 H N N 129 GLN HE22 H N N 130 GLN HXT H N N 131 GLU N N N N 132 GLU CA C N S 133 GLU C C N N 134 GLU O O N N 135 GLU CB C N N 136 GLU CG C N N 137 GLU CD C N N 138 GLU OE1 O N N 139 GLU OE2 O N N 140 GLU OXT O N N 141 GLU H H N N 142 GLU H2 H N N 143 GLU HA H N N 144 GLU HB2 H N N 145 GLU HB3 H N N 146 GLU HG2 H N N 147 GLU HG3 H N N 148 GLU HE2 H N N 149 GLU HXT H N N 150 GLY N N N N 151 GLY CA C N N 152 GLY C C N N 153 GLY O O N N 154 GLY OXT O N N 155 GLY H H N N 156 GLY H2 H N N 157 GLY HA2 H N N 158 GLY HA3 H N N 159 GLY HXT H N N 160 HIS N N N N 161 HIS CA C N S 162 HIS C C N N 163 HIS O O N N 164 HIS CB C N N 165 HIS CG C Y N 166 HIS ND1 N Y N 167 HIS CD2 C Y N 168 HIS CE1 C Y N 169 HIS NE2 N Y N 170 HIS OXT O N N 171 HIS H H N N 172 HIS H2 H N N 173 HIS HA H N N 174 HIS HB2 H N N 175 HIS HB3 H N N 176 HIS HD1 H N N 177 HIS HD2 H N N 178 HIS HE1 H N N 179 HIS HE2 H N N 180 HIS HXT H N N 181 ILE N N N N 182 ILE CA C N S 183 ILE C C N N 184 ILE O O N N 185 ILE CB C N S 186 ILE CG1 C N N 187 ILE CG2 C N N 188 ILE CD1 C N N 189 ILE OXT O N N 190 ILE H H N N 191 ILE H2 H N N 192 ILE HA H N N 193 ILE HB H N N 194 ILE HG12 H N N 195 ILE HG13 H N N 196 ILE HG21 H N N 197 ILE HG22 H N N 198 ILE HG23 H N N 199 ILE HD11 H N N 200 ILE HD12 H N N 201 ILE HD13 H N N 202 ILE HXT H N N 203 LEU N N N N 204 LEU CA C N S 205 LEU C C N N 206 LEU O O N N 207 LEU CB C N N 208 LEU CG C N N 209 LEU CD1 C N N 210 LEU CD2 C N N 211 LEU OXT O N N 212 LEU H H N N 213 LEU H2 H N N 214 LEU HA H N N 215 LEU HB2 H N N 216 LEU HB3 H N N 217 LEU HG H N N 218 LEU HD11 H N N 219 LEU HD12 H N N 220 LEU HD13 H N N 221 LEU HD21 H N N 222 LEU HD22 H N N 223 LEU HD23 H N N 224 LEU HXT H N N 225 LYS N N N N 226 LYS CA C N S 227 LYS C C N N 228 LYS O O N N 229 LYS CB C N N 230 LYS CG C N N 231 LYS CD C N N 232 LYS CE C N N 233 LYS NZ N N N 234 LYS OXT O N N 235 LYS H H N N 236 LYS H2 H N N 237 LYS HA H N N 238 LYS HB2 H N N 239 LYS HB3 H N N 240 LYS HG2 H N N 241 LYS HG3 H N N 242 LYS HD2 H N N 243 LYS HD3 H N N 244 LYS HE2 H N N 245 LYS HE3 H N N 246 LYS HZ1 H N N 247 LYS HZ2 H N N 248 LYS HZ3 H N N 249 LYS HXT H N N 250 MAN C1 C N S 251 MAN C2 C N S 252 MAN C3 C N S 253 MAN C4 C N S 254 MAN C5 C N R 255 MAN C6 C N N 256 MAN O1 O N N 257 MAN O2 O N N 258 MAN O3 O N N 259 MAN O4 O N N 260 MAN O5 O N N 261 MAN O6 O N N 262 MAN H1 H N N 263 MAN H2 H N N 264 MAN H3 H N N 265 MAN H4 H N N 266 MAN H5 H N N 267 MAN H61 H N N 268 MAN H62 H N N 269 MAN HO1 H N N 270 MAN HO2 H N N 271 MAN HO3 H N N 272 MAN HO4 H N N 273 MAN HO6 H N N 274 MET N N N N 275 MET CA C N S 276 MET C C N N 277 MET O O N N 278 MET CB C N N 279 MET CG C N N 280 MET SD S N N 281 MET CE C N N 282 MET OXT O N N 283 MET H H N N 284 MET H2 H N N 285 MET HA H N N 286 MET HB2 H N N 287 MET HB3 H N N 288 MET HG2 H N N 289 MET HG3 H N N 290 MET HE1 H N N 291 MET HE2 H N N 292 MET HE3 H N N 293 MET HXT H N N 294 NAG C1 C N R 295 NAG C2 C N R 296 NAG C3 C N R 297 NAG C4 C N S 298 NAG C5 C N R 299 NAG C6 C N N 300 NAG C7 C N N 301 NAG C8 C N N 302 NAG N2 N N N 303 NAG O1 O N N 304 NAG O3 O N N 305 NAG O4 O N N 306 NAG O5 O N N 307 NAG O6 O N N 308 NAG O7 O N N 309 NAG H1 H N N 310 NAG H2 H N N 311 NAG H3 H N N 312 NAG H4 H N N 313 NAG H5 H N N 314 NAG H61 H N N 315 NAG H62 H N N 316 NAG H81 H N N 317 NAG H82 H N N 318 NAG H83 H N N 319 NAG HN2 H N N 320 NAG HO1 H N N 321 NAG HO3 H N N 322 NAG HO4 H N N 323 NAG HO6 H N N 324 PHE N N N N 325 PHE CA C N S 326 PHE C C N N 327 PHE O O N N 328 PHE CB C N N 329 PHE CG C Y N 330 PHE CD1 C Y N 331 PHE CD2 C Y N 332 PHE CE1 C Y N 333 PHE CE2 C Y N 334 PHE CZ C Y N 335 PHE OXT O N N 336 PHE H H N N 337 PHE H2 H N N 338 PHE HA H N N 339 PHE HB2 H N N 340 PHE HB3 H N N 341 PHE HD1 H N N 342 PHE HD2 H N N 343 PHE HE1 H N N 344 PHE HE2 H N N 345 PHE HZ H N N 346 PHE HXT H N N 347 PRO N N N N 348 PRO CA C N S 349 PRO C C N N 350 PRO O O N N 351 PRO CB C N N 352 PRO CG C N N 353 PRO CD C N N 354 PRO OXT O N N 355 PRO H H N N 356 PRO HA H N N 357 PRO HB2 H N N 358 PRO HB3 H N N 359 PRO HG2 H N N 360 PRO HG3 H N N 361 PRO HD2 H N N 362 PRO HD3 H N N 363 PRO HXT H N N 364 SER N N N N 365 SER CA C N S 366 SER C C N N 367 SER O O N N 368 SER CB C N N 369 SER OG O N N 370 SER OXT O N N 371 SER H H N N 372 SER H2 H N N 373 SER HA H N N 374 SER HB2 H N N 375 SER HB3 H N N 376 SER HG H N N 377 SER HXT H N N 378 THR N N N N 379 THR CA C N S 380 THR C C N N 381 THR O O N N 382 THR CB C N R 383 THR OG1 O N N 384 THR CG2 C N N 385 THR OXT O N N 386 THR H H N N 387 THR H2 H N N 388 THR HA H N N 389 THR HB H N N 390 THR HG1 H N N 391 THR HG21 H N N 392 THR HG22 H N N 393 THR HG23 H N N 394 THR HXT H N N 395 TRP N N N N 396 TRP CA C N S 397 TRP C C N N 398 TRP O O N N 399 TRP CB C N N 400 TRP CG C Y N 401 TRP CD1 C Y N 402 TRP CD2 C Y N 403 TRP NE1 N Y N 404 TRP CE2 C Y N 405 TRP CE3 C Y N 406 TRP CZ2 C Y N 407 TRP CZ3 C Y N 408 TRP CH2 C Y N 409 TRP OXT O N N 410 TRP H H N N 411 TRP H2 H N N 412 TRP HA H N N 413 TRP HB2 H N N 414 TRP HB3 H N N 415 TRP HD1 H N N 416 TRP HE1 H N N 417 TRP HE3 H N N 418 TRP HZ2 H N N 419 TRP HZ3 H N N 420 TRP HH2 H N N 421 TRP HXT H N N 422 TYR N N N N 423 TYR CA C N S 424 TYR C C N N 425 TYR O O N N 426 TYR CB C N N 427 TYR CG C Y N 428 TYR CD1 C Y N 429 TYR CD2 C Y N 430 TYR CE1 C Y N 431 TYR CE2 C Y N 432 TYR CZ C Y N 433 TYR OH O N N 434 TYR OXT O N N 435 TYR H H N N 436 TYR H2 H N N 437 TYR HA H N N 438 TYR HB2 H N N 439 TYR HB3 H N N 440 TYR HD1 H N N 441 TYR HD2 H N N 442 TYR HE1 H N N 443 TYR HE2 H N N 444 TYR HH H N N 445 TYR HXT H N N 446 VAL N N N N 447 VAL CA C N S 448 VAL C C N N 449 VAL O O N N 450 VAL CB C N N 451 VAL CG1 C N N 452 VAL CG2 C N N 453 VAL OXT O N N 454 VAL H H N N 455 VAL H2 H N N 456 VAL HA H N N 457 VAL HB H N N 458 VAL HG11 H N N 459 VAL HG12 H N N 460 VAL HG13 H N N 461 VAL HG21 H N N 462 VAL HG22 H N N 463 VAL HG23 H N N 464 VAL HXT H N N 465 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 GLN N CA sing N N 107 GLN N H sing N N 108 GLN N H2 sing N N 109 GLN CA C sing N N 110 GLN CA CB sing N N 111 GLN CA HA sing N N 112 GLN C O doub N N 113 GLN C OXT sing N N 114 GLN CB CG sing N N 115 GLN CB HB2 sing N N 116 GLN CB HB3 sing N N 117 GLN CG CD sing N N 118 GLN CG HG2 sing N N 119 GLN CG HG3 sing N N 120 GLN CD OE1 doub N N 121 GLN CD NE2 sing N N 122 GLN NE2 HE21 sing N N 123 GLN NE2 HE22 sing N N 124 GLN OXT HXT sing N N 125 GLU N CA sing N N 126 GLU N H sing N N 127 GLU N H2 sing N N 128 GLU CA C sing N N 129 GLU CA CB sing N N 130 GLU CA HA sing N N 131 GLU C O doub N N 132 GLU C OXT sing N N 133 GLU CB CG sing N N 134 GLU CB HB2 sing N N 135 GLU CB HB3 sing N N 136 GLU CG CD sing N N 137 GLU CG HG2 sing N N 138 GLU CG HG3 sing N N 139 GLU CD OE1 doub N N 140 GLU CD OE2 sing N N 141 GLU OE2 HE2 sing N N 142 GLU OXT HXT sing N N 143 GLY N CA sing N N 144 GLY N H sing N N 145 GLY N H2 sing N N 146 GLY CA C sing N N 147 GLY CA HA2 sing N N 148 GLY CA HA3 sing N N 149 GLY C O doub N N 150 GLY C OXT sing N N 151 GLY OXT HXT sing N N 152 HIS N CA sing N N 153 HIS N H sing N N 154 HIS N H2 sing N N 155 HIS CA C sing N N 156 HIS CA CB sing N N 157 HIS CA HA sing N N 158 HIS C O doub N N 159 HIS C OXT sing N N 160 HIS CB CG sing N N 161 HIS CB HB2 sing N N 162 HIS CB HB3 sing N N 163 HIS CG ND1 sing Y N 164 HIS CG CD2 doub Y N 165 HIS ND1 CE1 doub Y N 166 HIS ND1 HD1 sing N N 167 HIS CD2 NE2 sing Y N 168 HIS CD2 HD2 sing N N 169 HIS CE1 NE2 sing Y N 170 HIS CE1 HE1 sing N N 171 HIS NE2 HE2 sing N N 172 HIS OXT HXT sing N N 173 ILE N CA sing N N 174 ILE N H sing N N 175 ILE N H2 sing N N 176 ILE CA C sing N N 177 ILE CA CB sing N N 178 ILE CA HA sing N N 179 ILE C O doub N N 180 ILE C OXT sing N N 181 ILE CB CG1 sing N N 182 ILE CB CG2 sing N N 183 ILE CB HB sing N N 184 ILE CG1 CD1 sing N N 185 ILE CG1 HG12 sing N N 186 ILE CG1 HG13 sing N N 187 ILE CG2 HG21 sing N N 188 ILE CG2 HG22 sing N N 189 ILE CG2 HG23 sing N N 190 ILE CD1 HD11 sing N N 191 ILE CD1 HD12 sing N N 192 ILE CD1 HD13 sing N N 193 ILE OXT HXT sing N N 194 LEU N CA sing N N 195 LEU N H sing N N 196 LEU N H2 sing N N 197 LEU CA C sing N N 198 LEU CA CB sing N N 199 LEU CA HA sing N N 200 LEU C O doub N N 201 LEU C OXT sing N N 202 LEU CB CG sing N N 203 LEU CB HB2 sing N N 204 LEU CB HB3 sing N N 205 LEU CG CD1 sing N N 206 LEU CG CD2 sing N N 207 LEU CG HG sing N N 208 LEU CD1 HD11 sing N N 209 LEU CD1 HD12 sing N N 210 LEU CD1 HD13 sing N N 211 LEU CD2 HD21 sing N N 212 LEU CD2 HD22 sing N N 213 LEU CD2 HD23 sing N N 214 LEU OXT HXT sing N N 215 LYS N CA sing N N 216 LYS N H sing N N 217 LYS N H2 sing N N 218 LYS CA C sing N N 219 LYS CA CB sing N N 220 LYS CA HA sing N N 221 LYS C O doub N N 222 LYS C OXT sing N N 223 LYS CB CG sing N N 224 LYS CB HB2 sing N N 225 LYS CB HB3 sing N N 226 LYS CG CD sing N N 227 LYS CG HG2 sing N N 228 LYS CG HG3 sing N N 229 LYS CD CE sing N N 230 LYS CD HD2 sing N N 231 LYS CD HD3 sing N N 232 LYS CE NZ sing N N 233 LYS CE HE2 sing N N 234 LYS CE HE3 sing N N 235 LYS NZ HZ1 sing N N 236 LYS NZ HZ2 sing N N 237 LYS NZ HZ3 sing N N 238 LYS OXT HXT sing N N 239 MAN C1 C2 sing N N 240 MAN C1 O1 sing N N 241 MAN C1 O5 sing N N 242 MAN C1 H1 sing N N 243 MAN C2 C3 sing N N 244 MAN C2 O2 sing N N 245 MAN C2 H2 sing N N 246 MAN C3 C4 sing N N 247 MAN C3 O3 sing N N 248 MAN C3 H3 sing N N 249 MAN C4 C5 sing N N 250 MAN C4 O4 sing N N 251 MAN C4 H4 sing N N 252 MAN C5 C6 sing N N 253 MAN C5 O5 sing N N 254 MAN C5 H5 sing N N 255 MAN C6 O6 sing N N 256 MAN C6 H61 sing N N 257 MAN C6 H62 sing N N 258 MAN O1 HO1 sing N N 259 MAN O2 HO2 sing N N 260 MAN O3 HO3 sing N N 261 MAN O4 HO4 sing N N 262 MAN O6 HO6 sing N N 263 MET N CA sing N N 264 MET N H sing N N 265 MET N H2 sing N N 266 MET CA C sing N N 267 MET CA CB sing N N 268 MET CA HA sing N N 269 MET C O doub N N 270 MET C OXT sing N N 271 MET CB CG sing N N 272 MET CB HB2 sing N N 273 MET CB HB3 sing N N 274 MET CG SD sing N N 275 MET CG HG2 sing N N 276 MET CG HG3 sing N N 277 MET SD CE sing N N 278 MET CE HE1 sing N N 279 MET CE HE2 sing N N 280 MET CE HE3 sing N N 281 MET OXT HXT sing N N 282 NAG C1 C2 sing N N 283 NAG C1 O1 sing N N 284 NAG C1 O5 sing N N 285 NAG C1 H1 sing N N 286 NAG C2 C3 sing N N 287 NAG C2 N2 sing N N 288 NAG C2 H2 sing N N 289 NAG C3 C4 sing N N 290 NAG C3 O3 sing N N 291 NAG C3 H3 sing N N 292 NAG C4 C5 sing N N 293 NAG C4 O4 sing N N 294 NAG C4 H4 sing N N 295 NAG C5 C6 sing N N 296 NAG C5 O5 sing N N 297 NAG C5 H5 sing N N 298 NAG C6 O6 sing N N 299 NAG C6 H61 sing N N 300 NAG C6 H62 sing N N 301 NAG C7 C8 sing N N 302 NAG C7 N2 sing N N 303 NAG C7 O7 doub N N 304 NAG C8 H81 sing N N 305 NAG C8 H82 sing N N 306 NAG C8 H83 sing N N 307 NAG N2 HN2 sing N N 308 NAG O1 HO1 sing N N 309 NAG O3 HO3 sing N N 310 NAG O4 HO4 sing N N 311 NAG O6 HO6 sing N N 312 PHE N CA sing N N 313 PHE N H sing N N 314 PHE N H2 sing N N 315 PHE CA C sing N N 316 PHE CA CB sing N N 317 PHE CA HA sing N N 318 PHE C O doub N N 319 PHE C OXT sing N N 320 PHE CB CG sing N N 321 PHE CB HB2 sing N N 322 PHE CB HB3 sing N N 323 PHE CG CD1 doub Y N 324 PHE CG CD2 sing Y N 325 PHE CD1 CE1 sing Y N 326 PHE CD1 HD1 sing N N 327 PHE CD2 CE2 doub Y N 328 PHE CD2 HD2 sing N N 329 PHE CE1 CZ doub Y N 330 PHE CE1 HE1 sing N N 331 PHE CE2 CZ sing Y N 332 PHE CE2 HE2 sing N N 333 PHE CZ HZ sing N N 334 PHE OXT HXT sing N N 335 PRO N CA sing N N 336 PRO N CD sing N N 337 PRO N H sing N N 338 PRO CA C sing N N 339 PRO CA CB sing N N 340 PRO CA HA sing N N 341 PRO C O doub N N 342 PRO C OXT sing N N 343 PRO CB CG sing N N 344 PRO CB HB2 sing N N 345 PRO CB HB3 sing N N 346 PRO CG CD sing N N 347 PRO CG HG2 sing N N 348 PRO CG HG3 sing N N 349 PRO CD HD2 sing N N 350 PRO CD HD3 sing N N 351 PRO OXT HXT sing N N 352 SER N CA sing N N 353 SER N H sing N N 354 SER N H2 sing N N 355 SER CA C sing N N 356 SER CA CB sing N N 357 SER CA HA sing N N 358 SER C O doub N N 359 SER C OXT sing N N 360 SER CB OG sing N N 361 SER CB HB2 sing N N 362 SER CB HB3 sing N N 363 SER OG HG sing N N 364 SER OXT HXT sing N N 365 THR N CA sing N N 366 THR N H sing N N 367 THR N H2 sing N N 368 THR CA C sing N N 369 THR CA CB sing N N 370 THR CA HA sing N N 371 THR C O doub N N 372 THR C OXT sing N N 373 THR CB OG1 sing N N 374 THR CB CG2 sing N N 375 THR CB HB sing N N 376 THR OG1 HG1 sing N N 377 THR CG2 HG21 sing N N 378 THR CG2 HG22 sing N N 379 THR CG2 HG23 sing N N 380 THR OXT HXT sing N N 381 TRP N CA sing N N 382 TRP N H sing N N 383 TRP N H2 sing N N 384 TRP CA C sing N N 385 TRP CA CB sing N N 386 TRP CA HA sing N N 387 TRP C O doub N N 388 TRP C OXT sing N N 389 TRP CB CG sing N N 390 TRP CB HB2 sing N N 391 TRP CB HB3 sing N N 392 TRP CG CD1 doub Y N 393 TRP CG CD2 sing Y N 394 TRP CD1 NE1 sing Y N 395 TRP CD1 HD1 sing N N 396 TRP CD2 CE2 doub Y N 397 TRP CD2 CE3 sing Y N 398 TRP NE1 CE2 sing Y N 399 TRP NE1 HE1 sing N N 400 TRP CE2 CZ2 sing Y N 401 TRP CE3 CZ3 doub Y N 402 TRP CE3 HE3 sing N N 403 TRP CZ2 CH2 doub Y N 404 TRP CZ2 HZ2 sing N N 405 TRP CZ3 CH2 sing Y N 406 TRP CZ3 HZ3 sing N N 407 TRP CH2 HH2 sing N N 408 TRP OXT HXT sing N N 409 TYR N CA sing N N 410 TYR N H sing N N 411 TYR N H2 sing N N 412 TYR CA C sing N N 413 TYR CA CB sing N N 414 TYR CA HA sing N N 415 TYR C O doub N N 416 TYR C OXT sing N N 417 TYR CB CG sing N N 418 TYR CB HB2 sing N N 419 TYR CB HB3 sing N N 420 TYR CG CD1 doub Y N 421 TYR CG CD2 sing Y N 422 TYR CD1 CE1 sing Y N 423 TYR CD1 HD1 sing N N 424 TYR CD2 CE2 doub Y N 425 TYR CD2 HD2 sing N N 426 TYR CE1 CZ doub Y N 427 TYR CE1 HE1 sing N N 428 TYR CE2 CZ sing Y N 429 TYR CE2 HE2 sing N N 430 TYR CZ OH sing N N 431 TYR OH HH sing N N 432 TYR OXT HXT sing N N 433 VAL N CA sing N N 434 VAL N H sing N N 435 VAL N H2 sing N N 436 VAL CA C sing N N 437 VAL CA CB sing N N 438 VAL CA HA sing N N 439 VAL C O doub N N 440 VAL C OXT sing N N 441 VAL CB CG1 sing N N 442 VAL CB CG2 sing N N 443 VAL CB HB sing N N 444 VAL CG1 HG11 sing N N 445 VAL CG1 HG12 sing N N 446 VAL CG1 HG13 sing N N 447 VAL CG2 HG21 sing N N 448 VAL CG2 HG22 sing N N 449 VAL CG2 HG23 sing N N 450 VAL OXT HXT sing N N 451 # _pdbx_audit_support.funding_organization 'Leverhulme Trust' _pdbx_audit_support.country 'United Kingdom' _pdbx_audit_support.grant_number 'F/10 105/E' _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 BMA 3 n 2 MAN 4 n # _space_group.name_H-M_alt 'P 21 3' _space_group.name_Hall 'P 2ac 2ab 3' _space_group.IT_number 198 _space_group.crystal_system cubic _space_group.id 1 # _atom_sites.entry_id 8R4Y _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.007068 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007068 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007068 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 5.96793 ? ? ? 14.89577 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? CA ? ? 16.26893 3.65395 ? ? 3.58509 77.28589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 6.96715 ? ? ? 11.43723 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 7.96527 ? ? ? 9.05267 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O1- ? ? 8.95260 ? ? ? 12.67477 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 15.91112 ? ? ? 10.84690 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ # loop_ #