HEADER TRANSCRIPTION 27-NOV-23 8R7Z TITLE TRANSCRIPTION FACTOR BARHL2 HOMODIMER WITH SPACING FOUR BP COMPND MOL_ID: 1; COMPND 2 MOLECULE: BARH-LIKE 2 HOMEOBOX PROTEIN; COMPND 3 CHAIN: E, A, G, K; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: THE RESIDUE 63 - NA IS A SODIUM ION; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DNA (5'-D(P*CP*TP*AP*AP*AP*CP*GP*GP*T)-3'); COMPND 8 CHAIN: D; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: DNA (5'-D(P*AP*CP*CP*GP*TP*TP*TP*AP*G)-3'); COMPND 12 CHAIN: B; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 4; COMPND 15 MOLECULE: DNA (5'- COMPND 16 D(P*CP*TP*AP*AP*TP*TP*GP*CP*TP*AP*CP*CP*GP*TP*TP*TP*AP*G)-3'); COMPND 17 CHAIN: H; COMPND 18 ENGINEERED: YES; COMPND 19 MOL_ID: 5; COMPND 20 MOLECULE: DNA (5'- COMPND 21 D(P*CP*TP*AP*AP*AP*CP*GP*GP*TP*AP*GP*CP*AP*AP*TP*TP*AP*G)-3'); COMPND 22 CHAIN: I; COMPND 23 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BARHL2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PETG20A-SBP; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 MOL_ID: 3; SOURCE 15 SYNTHETIC: YES; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_TAXID: 9606; SOURCE 18 MOL_ID: 4; SOURCE 19 SYNTHETIC: YES; SOURCE 20 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 21 ORGANISM_TAXID: 9606; SOURCE 22 MOL_ID: 5; SOURCE 23 SYNTHETIC: YES; SOURCE 24 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 25 ORGANISM_TAXID: 9606 KEYWDS TRANSCRIPTION FACTOR, HOMEOBOX PROTEIN, HOMODIMER, COMPLEX WITH KEYWDS 2 SPECIFIC DNA, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR E.MORGUNOVA,A.POPOV,Y.YIN,J.TAIPALE REVDAT 3 11-JUN-25 8R7Z 1 JRNL REVDAT 2 23-APR-25 8R7Z 1 JRNL REVDAT 1 04-DEC-24 8R7Z 0 JRNL AUTH Z.XIE,I.SOKOLOV,M.OSMALA,X.YUE,G.BOWER,J.P.PETT,Y.CHEN, JRNL AUTH 2 K.WANG,A.D.CAVGA,A.POPOV,S.A.TEICHMANN,E.MORGUNOVA,E.Z.KVON, JRNL AUTH 3 Y.YIN,J.TAIPALE JRNL TITL DNA-GUIDED TRANSCRIPTION FACTOR INTERACTIONS EXTEND HUMAN JRNL TITL 2 GENE REGULATORY CODE. JRNL REF NATURE V. 641 1329 2025 JRNL REFN ESSN 1476-4687 JRNL PMID 40205063 JRNL DOI 10.1038/S41586-025-08844-Z REMARK 2 REMARK 2 RESOLUTION. 3.26 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0419 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.26 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 10173 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 521 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.26 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.35 REMARK 3 REFLECTION IN BIN (WORKING SET) : 681 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.03 REMARK 3 BIN R VALUE (WORKING SET) : 0.3820 REMARK 3 BIN FREE R VALUE SET COUNT : 29 REMARK 3 BIN FREE R VALUE : 0.4680 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1959 REMARK 3 NUCLEIC ACID ATOMS : 1107 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 6 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 175.8 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.461 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.387 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 56.323 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.934 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3230 ; 0.008 ; 0.011 REMARK 3 BOND LENGTHS OTHERS (A): 2519 ; 0.002 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4575 ; 2.297 ; 1.834 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5789 ; 0.562 ; 1.771 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 224 ; 5.812 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 29 ;10.338 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 386 ;18.524 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 494 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3125 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 754 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 907 ;12.373 ;10.706 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 907 ;12.368 ;10.709 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1127 ;17.929 ;19.178 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1128 ;17.935 ;19.174 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2323 ;13.030 ;10.826 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2324 ;13.027 ;10.826 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3449 ;19.362 ;19.502 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4062 ;23.385 ;16.870 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4063 ;23.382 ;16.860 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 232 E 291 REMARK 3 ORIGIN FOR THE GROUP (A): -25.3437 -14.5958 -3.1847 REMARK 3 T TENSOR REMARK 3 T11: 0.0982 T22: 0.0924 REMARK 3 T33: 0.1107 T12: 0.0581 REMARK 3 T13: 0.0971 T23: 0.0490 REMARK 3 L TENSOR REMARK 3 L11: 10.6985 L22: 5.9507 REMARK 3 L33: 8.0107 L12: -0.9335 REMARK 3 L13: -0.7205 L23: 1.0830 REMARK 3 S TENSOR REMARK 3 S11: 0.2242 S12: -0.1437 S13: 0.2450 REMARK 3 S21: 0.1202 S22: -0.2396 S23: 0.3327 REMARK 3 S31: -0.2304 S32: -0.2401 S33: 0.0154 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : I 1 I 18 REMARK 3 RESIDUE RANGE : H 1 H 18 REMARK 3 ORIGIN FOR THE GROUP (A): 13.9287 -18.4889 21.2001 REMARK 3 T TENSOR REMARK 3 T11: 0.8960 T22: 1.2249 REMARK 3 T33: 1.1128 T12: -0.0891 REMARK 3 T13: -0.2447 T23: 0.2411 REMARK 3 L TENSOR REMARK 3 L11: 8.7401 L22: 1.9820 REMARK 3 L33: 4.7785 L12: -3.8887 REMARK 3 L13: 5.6733 L23: -2.1851 REMARK 3 S TENSOR REMARK 3 S11: -0.6990 S12: -1.3328 S13: 0.0116 REMARK 3 S21: 0.3156 S22: 0.7851 S23: -0.4404 REMARK 3 S31: -0.8269 S32: 0.1006 S33: -0.0861 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 10 B 18 REMARK 3 RESIDUE RANGE : D 1 D 9 REMARK 3 ORIGIN FOR THE GROUP (A): -27.4665 -24.6076 6.7299 REMARK 3 T TENSOR REMARK 3 T11: 0.3445 T22: 0.4011 REMARK 3 T33: 0.4009 T12: -0.1692 REMARK 3 T13: -0.0337 T23: 0.2544 REMARK 3 L TENSOR REMARK 3 L11: 12.4529 L22: 2.6021 REMARK 3 L33: 4.4841 L12: -3.8587 REMARK 3 L13: -4.5321 L23: -0.5658 REMARK 3 S TENSOR REMARK 3 S11: -0.5363 S12: -1.4582 S13: -0.8862 REMARK 3 S21: 0.4328 S22: 0.4402 S23: 0.3439 REMARK 3 S31: -0.0679 S32: 0.4003 S33: 0.0961 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 223 A 291 REMARK 3 ORIGIN FOR THE GROUP (A): 3.9997 -15.1506 4.0106 REMARK 3 T TENSOR REMARK 3 T11: 0.2085 T22: 0.4155 REMARK 3 T33: 0.2023 T12: 0.0282 REMARK 3 T13: -0.1016 T23: -0.0089 REMARK 3 L TENSOR REMARK 3 L11: 10.5133 L22: 11.1666 REMARK 3 L33: 8.9113 L12: -2.8529 REMARK 3 L13: 0.8908 L23: -1.4959 REMARK 3 S TENSOR REMARK 3 S11: 0.2026 S12: -0.4907 S13: -0.0453 REMARK 3 S21: 0.1908 S22: -0.0452 S23: -0.9071 REMARK 3 S31: 0.0158 S32: 0.7609 S33: -0.1574 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 232 G 291 REMARK 3 ORIGIN FOR THE GROUP (A): 30.7339 -28.9109 21.8642 REMARK 3 T TENSOR REMARK 3 T11: 0.9851 T22: 1.5019 REMARK 3 T33: 1.6164 T12: 0.0152 REMARK 3 T13: -0.0141 T23: 0.1618 REMARK 3 L TENSOR REMARK 3 L11: 3.3798 L22: 6.1593 REMARK 3 L33: 7.2931 L12: -0.2419 REMARK 3 L13: 1.3680 L23: 0.0063 REMARK 3 S TENSOR REMARK 3 S11: 0.1184 S12: 0.4131 S13: -0.0046 REMARK 3 S21: -0.2681 S22: 0.5028 S23: -1.1939 REMARK 3 S31: -0.0106 S32: 0.8093 S33: -0.6212 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : K 240 K 287 REMARK 3 ORIGIN FOR THE GROUP (A): 11.7272 -39.5722 30.8772 REMARK 3 T TENSOR REMARK 3 T11: 0.4938 T22: 0.7243 REMARK 3 T33: 0.6566 T12: 0.0398 REMARK 3 T13: 0.0183 T23: 0.3377 REMARK 3 L TENSOR REMARK 3 L11: 10.5737 L22: 4.3433 REMARK 3 L33: 1.3937 L12: 2.6820 REMARK 3 L13: -0.5021 L23: 2.0508 REMARK 3 S TENSOR REMARK 3 S11: -0.0774 S12: -0.5858 S13: 0.0083 REMARK 3 S21: 0.5129 S22: -0.1875 S23: 0.1014 REMARK 3 S31: 0.3207 S32: 0.1889 S33: 0.2649 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8R7Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-NOV-23. REMARK 100 THE DEPOSITION ID IS D_1292134574. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97626 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10697 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.260 REMARK 200 RESOLUTION RANGE LOW (A) : 46.170 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 21.50 REMARK 200 R MERGE (I) : 0.17900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.26 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.52 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 19.60 REMARK 200 R MERGE FOR SHELL (I) : 5.14200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05M SODIUM CACODILATE BUFFER (PH REMARK 280 6.5), PEG (4000), PEG(200), VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y,-Z REMARK 290 16555 X,-Y,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z,-X,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y REMARK 290 20555 -Z+1/2,X,-Y REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z,-X REMARK 290 23555 Y,-Z,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 79.97750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 79.97750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 79.97750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 79.97750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 79.97750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 79.97750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 79.97750 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 79.97750 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 79.97750 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 79.97750 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 79.97750 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 79.97750 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 79.97750 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 79.97750 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 79.97750 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 79.97750 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 79.97750 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 79.97750 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 79.97750 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 79.97750 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 79.97750 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 79.97750 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 79.97750 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 79.97750 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 79.97750 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 79.97750 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 79.97750 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 79.97750 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 79.97750 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 79.97750 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 79.97750 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 79.97750 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 79.97750 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 79.97750 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 79.97750 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 79.97750 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, D, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, G, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 3430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: K REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 NA NA E 500 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 101 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO K 232 REMARK 465 ARG K 233 REMARK 465 LYS K 234 REMARK 465 ALA K 235 REMARK 465 ARG K 236 REMARK 465 THR K 237 REMARK 465 ALA K 238 REMARK 465 PHE K 239 REMARK 465 LYS K 288 REMARK 465 ARG K 289 REMARK 465 GLN K 290 REMARK 465 THR K 291 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR E 291 O REMARK 470 PRO A 232 CG CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR G 256 OP1 DC I 12 1.91 REMARK 500 O3' DG I 8 ND1 HIS K 242 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O3' DT D 9 OP1 DA B 10 15455 1.94 REMARK 500 O3' DT D 9 P DA B 10 15455 1.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DA H 17 N3 DA H 17 C4 0.047 REMARK 500 DA H 17 C6 DA H 17 N1 0.053 REMARK 500 DA H 17 C5 DA H 17 N7 0.041 REMARK 500 DA H 17 C8 DA H 17 N9 0.054 REMARK 500 DC I 1 N1 DC I 1 C6 -0.040 REMARK 500 DT I 2 O3' DT I 2 C3' -0.049 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG E 236 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 DC D 1 O4' - C4' - C3' ANGL. DEV. = -2.7 DEGREES REMARK 500 DT D 2 O3' - P - OP2 ANGL. DEV. = 10.4 DEGREES REMARK 500 DT D 2 O3' - P - OP1 ANGL. DEV. = -16.0 DEGREES REMARK 500 DT D 2 O5' - P - OP2 ANGL. DEV. = -6.9 DEGREES REMARK 500 DT D 2 O5' - C5' - C4' ANGL. DEV. = -5.6 DEGREES REMARK 500 DA D 3 O3' - P - O5' ANGL. DEV. = -18.6 DEGREES REMARK 500 DA D 3 O3' - P - OP2 ANGL. DEV. = 8.0 DEGREES REMARK 500 DA D 3 O5' - P - OP1 ANGL. DEV. = 21.5 DEGREES REMARK 500 DA D 3 O5' - P - OP2 ANGL. DEV. = -21.7 DEGREES REMARK 500 DA D 5 O5' - P - OP1 ANGL. DEV. = -11.2 DEGREES REMARK 500 DC D 6 O3' - P - OP2 ANGL. DEV. = 7.3 DEGREES REMARK 500 DG D 8 O4' - C1' - N9 ANGL. DEV. = 3.1 DEGREES REMARK 500 DT D 9 O3' - P - OP2 ANGL. DEV. = 10.4 DEGREES REMARK 500 DT D 9 O5' - P - OP1 ANGL. DEV. = -6.6 DEGREES REMARK 500 DC B 11 O3' - P - OP2 ANGL. DEV. = 13.9 DEGREES REMARK 500 DC B 11 O3' - P - OP1 ANGL. DEV. = -14.1 DEGREES REMARK 500 DC B 11 O5' - P - OP2 ANGL. DEV. = -8.7 DEGREES REMARK 500 DC B 12 O3' - P - OP2 ANGL. DEV. = 7.1 DEGREES REMARK 500 DG B 13 O3' - P - O5' ANGL. DEV. = -11.5 DEGREES REMARK 500 DT B 14 C3' - C2' - C1' ANGL. DEV. = -6.1 DEGREES REMARK 500 DT B 14 O4' - C1' - N1 ANGL. DEV. = 3.3 DEGREES REMARK 500 DA B 17 O4' - C1' - N9 ANGL. DEV. = 2.9 DEGREES REMARK 500 DG B 18 O4' - C1' - N9 ANGL. DEV. = -5.3 DEGREES REMARK 500 DC H 8 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 DA H 10 O4' - C1' - N9 ANGL. DEV. = 3.0 DEGREES REMARK 500 DC H 12 C1' - O4' - C4' ANGL. DEV. = -8.0 DEGREES REMARK 500 DC H 12 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DG H 13 O4' - C1' - N9 ANGL. DEV. = -4.8 DEGREES REMARK 500 DT H 14 O5' - P - OP1 ANGL. DEV. = 10.1 DEGREES REMARK 500 DT H 14 O5' - P - OP2 ANGL. DEV. = -9.0 DEGREES REMARK 500 DT H 15 O3' - P - OP2 ANGL. DEV. = 6.9 DEGREES REMARK 500 DT H 15 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 DT H 16 N3 - C4 - O4 ANGL. DEV. = 4.4 DEGREES REMARK 500 DT H 16 C4 - C5 - C7 ANGL. DEV. = -4.5 DEGREES REMARK 500 DA H 17 O5' - P - OP1 ANGL. DEV. = -10.4 DEGREES REMARK 500 DA H 17 C8 - N9 - C4 ANGL. DEV. = 2.4 DEGREES REMARK 500 DA H 17 N9 - C4 - C5 ANGL. DEV. = -3.3 DEGREES REMARK 500 DG H 18 O3' - P - OP2 ANGL. DEV. = 10.9 DEGREES REMARK 500 DG H 18 O5' - P - OP2 ANGL. DEV. = -7.9 DEGREES REMARK 500 DC I 1 O4' - C4' - C3' ANGL. DEV. = -2.9 DEGREES REMARK 500 DT I 2 O3' - P - OP2 ANGL. DEV. = 12.0 DEGREES REMARK 500 DT I 2 O3' - P - OP1 ANGL. DEV. = -21.3 DEGREES REMARK 500 DT I 2 O4' - C1' - C2' ANGL. DEV. = -5.3 DEGREES REMARK 500 DT I 2 C3' - O3' - P ANGL. DEV. = -7.6 DEGREES REMARK 500 DA I 4 O3' - P - O5' ANGL. DEV. = -15.0 DEGREES REMARK 500 DA I 4 C3' - O3' - P ANGL. DEV. = 7.9 DEGREES REMARK 500 DC I 6 C3' - C2' - C1' ANGL. DEV. = -6.1 DEGREES REMARK 500 DC I 6 O4' - C1' - N1 ANGL. DEV. = 3.8 DEGREES REMARK 500 DG I 7 O3' - P - OP2 ANGL. DEV. = 8.6 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 55 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER E 258 171.89 -54.72 REMARK 500 GLN E 290 -61.90 -94.31 REMARK 500 SER A 258 170.87 -56.55 REMARK 500 GLN A 290 -62.04 -93.78 REMARK 500 ARG G 233 81.45 73.66 REMARK 500 SER G 258 172.52 -55.60 REMARK 500 GLN G 290 -61.92 -94.91 REMARK 500 SER K 258 172.65 -55.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 289 0.13 SIDE CHAIN REMARK 500 ARG G 253 0.09 SIDE CHAIN REMARK 500 ARG K 253 0.15 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 103 DISTANCE = 7.67 ANGSTROMS REMARK 525 HOH G 301 DISTANCE = 12.85 ANGSTROMS REMARK 525 HOH H 101 DISTANCE = 8.07 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8R7F RELATED DB: PDB REMARK 900 BARHL2 HOMODIMER ON DIFFERENT DNA DBREF 8R7Z E 232 291 UNP Q9NY43 BARH2_HUMAN 232 291 DBREF 8R7Z D 1 9 PDB 8R7Z 8R7Z 1 9 DBREF 8R7Z B 10 18 PDB 8R7Z 8R7Z 10 18 DBREF 8R7Z A 232 291 UNP Q9NY43 BARH2_HUMAN 232 291 DBREF 8R7Z G 232 291 UNP Q9NY43 BARH2_HUMAN 232 291 DBREF 8R7Z H 1 18 PDB 8R7Z 8R7Z 1 18 DBREF 8R7Z I 1 18 PDB 8R7Z 8R7Z 1 18 DBREF 8R7Z K 232 291 UNP Q9NY43 BARH2_HUMAN 232 291 SEQRES 1 E 60 PRO ARG LYS ALA ARG THR ALA PHE SER ASP HIS GLN LEU SEQRES 2 E 60 ASN GLN LEU GLU ARG SER PHE GLU ARG GLN LYS TYR LEU SEQRES 3 E 60 SER VAL GLN ASP ARG MET ASP LEU ALA ALA ALA LEU ASN SEQRES 4 E 60 LEU THR ASP THR GLN VAL LYS THR TRP TYR GLN ASN ARG SEQRES 5 E 60 ARG THR LYS TRP LYS ARG GLN THR SEQRES 1 D 9 DC DT DA DA DA DC DG DG DT SEQRES 1 B 9 DA DC DC DG DT DT DT DA DG SEQRES 1 A 60 PRO ARG LYS ALA ARG THR ALA PHE SER ASP HIS GLN LEU SEQRES 2 A 60 ASN GLN LEU GLU ARG SER PHE GLU ARG GLN LYS TYR LEU SEQRES 3 A 60 SER VAL GLN ASP ARG MET ASP LEU ALA ALA ALA LEU ASN SEQRES 4 A 60 LEU THR ASP THR GLN VAL LYS THR TRP TYR GLN ASN ARG SEQRES 5 A 60 ARG THR LYS TRP LYS ARG GLN THR SEQRES 1 G 60 PRO ARG LYS ALA ARG THR ALA PHE SER ASP HIS GLN LEU SEQRES 2 G 60 ASN GLN LEU GLU ARG SER PHE GLU ARG GLN LYS TYR LEU SEQRES 3 G 60 SER VAL GLN ASP ARG MET ASP LEU ALA ALA ALA LEU ASN SEQRES 4 G 60 LEU THR ASP THR GLN VAL LYS THR TRP TYR GLN ASN ARG SEQRES 5 G 60 ARG THR LYS TRP LYS ARG GLN THR SEQRES 1 H 18 DC DT DA DA DT DT DG DC DT DA DC DC DG SEQRES 2 H 18 DT DT DT DA DG SEQRES 1 I 18 DC DT DA DA DA DC DG DG DT DA DG DC DA SEQRES 2 I 18 DA DT DT DA DG SEQRES 1 K 60 PRO ARG LYS ALA ARG THR ALA PHE SER ASP HIS GLN LEU SEQRES 2 K 60 ASN GLN LEU GLU ARG SER PHE GLU ARG GLN LYS TYR LEU SEQRES 3 K 60 SER VAL GLN ASP ARG MET ASP LEU ALA ALA ALA LEU ASN SEQRES 4 K 60 LEU THR ASP THR GLN VAL LYS THR TRP TYR GLN ASN ARG SEQRES 5 K 60 ARG THR LYS TRP LYS ARG GLN THR HET NA E 500 1 HETNAM NA SODIUM ION FORMUL 9 NA NA 1+ FORMUL 10 HOH *6(H2 O) HELIX 1 AA1 SER E 240 GLN E 254 1 15 HELIX 2 AA2 SER E 258 LEU E 269 1 12 HELIX 3 AA3 THR E 272 LYS E 288 1 17 HELIX 4 AA4 SER A 240 GLN A 254 1 15 HELIX 5 AA5 SER A 258 LEU A 269 1 12 HELIX 6 AA6 THR A 272 THR A 291 1 20 HELIX 7 AA7 SER G 240 GLN G 254 1 15 HELIX 8 AA8 SER G 258 LEU G 269 1 12 HELIX 9 AA9 THR G 272 ARG G 289 1 18 HELIX 10 AB1 ASP K 241 GLN K 254 1 14 HELIX 11 AB2 SER K 258 LEU K 269 1 12 HELIX 12 AB3 THR K 272 TRP K 287 1 16 CRYST1 159.955 159.955 159.955 90.00 90.00 90.00 I 21 3 96 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006252 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006252 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006252 0.00000 MASTER 674 0 1 12 0 0 0 6 3073 8 0 26 END