HEADER SUGAR BINDING PROTEIN 28-NOV-23 8R8A TITLE STRUCTURE OF THE N-TERMINAL DOMAIN OF CMA IN COMPLEX WITH N- TITLE 2 ACETYLLACTOSAMINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NIGRIN B-LIKE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: RESIDUE 6-132 OF THE MATURE PROTEIN PRECEDED BY COMPND 6 RESIDUES LEFT FROM TEV CLEAVAGE SITE. WE USED THE NUMBERING SUCH AS COMPND 7 WE KEPT THE ONE OF THE MATURE PROTEIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CUCUMIS MELO; SOURCE 3 ORGANISM_COMMON: MUSKMELON; SOURCE 4 ORGANISM_TAXID: 3656; SOURCE 5 GENE: LOC107992255, 107992255; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: TUNER (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PET40B-TEV KEYWDS LECTIN, BETA-TREFOIL, GALACTOSE, N-ACETYLLACTOSAMINE, SUGAR BINDING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.LUNDSTROM,A.VARROT REVDAT 3 13-NOV-24 8R8A 1 REMARK REVDAT 2 06-MAR-24 8R8A 1 JRNL REVDAT 1 27-DEC-23 8R8A 0 JRNL AUTH J.LUNDSTROM,E.GILLON,V.CHAZALET,N.KEREKES,A.DI MAIO,T.FEIZI, JRNL AUTH 2 Y.LIU,A.VARROT,D.BOJAR JRNL TITL ELUCIDATING THE GLYCAN-BINDING SPECIFICITY AND STRUCTURE OF JRNL TITL 2 CUCUMIS MELO AGGLUTININ, A NEW R-TYPE LECTIN. JRNL REF BEILSTEIN J ORG CHEM V. 20 306 2024 JRNL REFN ISSN 1860-5397 JRNL PMID 38410776 JRNL DOI 10.3762/BJOC.20.31 REMARK 2 REMARK 2 RESOLUTION. 1.32 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0419 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.32 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 29694 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.144 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.062 REMARK 3 FREE R VALUE TEST SET COUNT : 1503 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.32 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.35 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2007 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.35 REMARK 3 BIN R VALUE (WORKING SET) : 0.2160 REMARK 3 BIN FREE R VALUE SET COUNT : 120 REMARK 3 BIN FREE R VALUE : 0.2970 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 953 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 29 REMARK 3 SOLVENT ATOMS : 241 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.24500 REMARK 3 B22 (A**2) : 0.76100 REMARK 3 B33 (A**2) : -0.47000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.06800 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.054 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.054 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.025 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.297 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1088 ; 0.013 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 962 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1508 ; 1.721 ; 1.776 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2244 ; 0.616 ; 1.749 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 145 ; 6.145 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 2 ; 1.385 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 159 ;14.000 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 179 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1316 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 228 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 193 ; 0.213 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 43 ; 0.188 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 551 ; 0.176 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 144 ; 0.193 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 13 ; 0.120 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): 2 ; 0.287 ; 0.200 REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 558 ; 4.445 ; 1.397 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 558 ; 4.444 ; 1.398 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 709 ; 5.852 ; 2.511 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 710 ; 5.852 ; 2.512 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 530 ; 6.411 ; 1.568 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 531 ; 6.406 ; 1.570 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 798 ; 8.283 ; 2.792 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 799 ; 8.277 ; 2.793 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 2050 ; 5.716 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS ANISOTROPIC REFINEMENT REMARK 4 REMARK 4 8R8A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-DEC-23. REMARK 100 THE DEPOSITION ID IS D_1292134826. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-OCT-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.13 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29695 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.317 REMARK 200 RESOLUTION RANGE LOW (A) : 46.780 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 13.50 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 25.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.32 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.34 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.36900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: DIAMOND REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG SMEAR MEDIUM, 0.1 M MES PH REMARK 280 6.5, AND 5 MM OF CACL2, MGCL2, CSCL2, CDCL2, NICL2 AND ZINC REMARK 280 ACETATE TRANSFERED IN 30% PEG SMEAR MEDIUM 5MM CDCL2 FOR REMARK 280 CRYOPROTECTION, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 10.74054 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 18.39100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 46.77845 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 10.74054 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 18.39100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 46.77845 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 524 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 3 REMARK 465 ALA A 4 REMARK 465 MET A 5 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 8 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 30 15.29 81.17 REMARK 500 TYR A 112 30.02 70.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 536 DISTANCE = 6.05 ANGSTROMS REMARK 525 HOH A 537 DISTANCE = 6.31 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 201 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 11 NE2 REMARK 620 2 HIS A 66 NE2 14.3 REMARK 620 3 ASP A 132 OXT 90.3 83.4 REMARK 620 4 HOH A 310 O 87.6 100.3 91.9 REMARK 620 5 HOH A 415 O 90.0 77.1 86.7 177.2 REMARK 620 6 HOH A 434 O 92.7 99.1 176.2 90.5 91.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 202 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 30 NE2 REMARK 620 2 ASP A 75 OD2 92.1 REMARK 620 3 HOH A 362 O 94.1 92.9 REMARK 620 4 HOH A 430 O 174.9 91.8 88.9 REMARK 620 5 HOH A 438 O 92.7 91.3 171.9 84.0 REMARK 620 6 HOH A 445 O 92.1 175.7 86.2 83.9 89.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 203 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 83 OD1 REMARK 620 2 ASP A 92 OD1 52.8 REMARK 620 3 ASP A 92 OD2 53.5 4.1 REMARK 620 4 THR A 94 OG1 47.3 7.1 6.2 REMARK 620 5 HOH A 349 O 48.1 9.6 7.0 3.8 REMARK 620 6 HOH A 454 O 57.5 7.1 4.2 10.2 10.0 REMARK 620 7 HOH A 472 O 53.4 12.0 8.1 9.3 6.2 8.1 REMARK 620 8 HOH A 472 O 51.7 12.7 8.9 8.9 5.3 9.6 1.8 REMARK 620 N 1 2 3 4 5 6 7 DBREF1 8R8A A 7 132 UNP A0A1S4E5V9_CUCME DBREF2 8R8A A A0A1S4E5V9 34 159 SEQADV 8R8A GLY A 3 UNP A0A1S4E5V EXPRESSION TAG SEQADV 8R8A ALA A 4 UNP A0A1S4E5V EXPRESSION TAG SEQADV 8R8A MET A 5 UNP A0A1S4E5V EXPRESSION TAG SEQADV 8R8A VAL A 6 UNP A0A1S4E5V EXPRESSION TAG SEQRES 1 A 130 GLY ALA MET VAL SER ARG SER THR HIS LEU VAL GLY GLN SEQRES 2 A 130 ASP GLY LEU CYS LEU ASP VAL ILE GLY GLY TYR SER ASP SEQRES 3 A 130 ASN HIS VAL PRO THR GLN LEU TRP PRO CYS GLY PRO GLN SEQRES 4 A 130 ASN ASN GLN LEU TRP THR ILE GLN ALA ASP GLY THR ILE SEQRES 5 A 130 ARG THR MET GLY LYS CYS LEU VAL PRO ASN GLY HIS ASP SEQRES 6 A 130 PRO GLY SER TYR THR MET ILE ASP ASP CYS ASN LYS ALA SEQRES 7 A 130 ASP PRO ASN ASP LYS THR TRP LYS LEU TYR PRO ASP GLY SEQRES 8 A 130 THR LEU THR HIS VAL ARG SER SER LEU VAL LEU THR SER SEQRES 9 A 130 GLN GLY THR GLY ALA TYR ALA ILE THR THR ILE GLU THR SEQRES 10 A 130 ASN THR SER ALA PRO THR GLN SER TRP GLY THR ALA ASP HET NDG C 1 15 HET GAL C 2 11 HET CD A 201 1 HET CD A 202 1 HET CD A 203 1 HETNAM NDG 2-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM CD CADMIUM ION HETSYN NDG N-ACETYL-ALPHA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY- HETSYN 2 NDG ALPHA-D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2- HETSYN 3 NDG ACETAMIDO-2-DEOXY-GLUCOSE; 2-(ACETYLAMINO)-2-DEOXY-A- HETSYN 4 NDG D-GLUCOPYRANOSE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE FORMUL 2 NDG C8 H15 N O6 FORMUL 2 GAL C6 H12 O6 FORMUL 3 CD 3(CD 2+) FORMUL 6 HOH *241(H2 O) HELIX 1 AA1 GLY A 14 LEU A 18 5 5 HELIX 2 AA2 GLY A 24 TYR A 26 5 3 HELIX 3 AA3 GLN A 41 LEU A 45 5 5 HELIX 4 AA4 ASP A 81 THR A 86 1 6 HELIX 5 AA5 ALA A 123 SER A 127 5 5 SHEET 1 AA1 8 VAL A 103 THR A 105 0 SHEET 2 AA1 8 THR A 116 GLU A 118 -1 O THR A 116 N THR A 105 SHEET 3 AA1 8 SER A 70 ASP A 75 -1 N SER A 70 O ILE A 117 SHEET 4 AA1 8 LYS A 59 PRO A 63 -1 N CYS A 60 O ASP A 75 SHEET 5 AA1 8 ILE A 54 THR A 56 -1 N ILE A 54 O LEU A 61 SHEET 6 AA1 8 TRP A 46 ILE A 48 -1 N THR A 47 O ARG A 55 SHEET 7 AA1 8 ARG A 8 VAL A 13 -1 N THR A 10 O TRP A 46 SHEET 8 AA1 8 GLY A 129 ALA A 131 -1 O GLY A 129 N VAL A 13 SHEET 1 AA2 2 CYS A 19 VAL A 22 0 SHEET 2 AA2 2 THR A 33 TRP A 36 -1 O TRP A 36 N CYS A 19 SHEET 1 AA3 2 TRP A 87 LEU A 89 0 SHEET 2 AA3 2 LEU A 95 HIS A 97 -1 O THR A 96 N LYS A 88 SSBOND 1 CYS A 19 CYS A 38 1555 1555 2.07 SSBOND 2 CYS A 60 CYS A 77 1555 1555 2.04 LINK O4 NDG C 1 C1 GAL C 2 1555 1555 1.42 LINK NE2 HIS A 11 CD CD A 201 1555 1555 2.08 LINK NE2 HIS A 30 CD CD A 202 1555 1555 2.08 LINK NE2 HIS A 66 CD CD A 201 1555 1655 2.04 LINK OD2 ASP A 75 CD CD A 202 1555 1555 2.06 LINK OD1BASN A 83 CD CD A 203 1555 4646 1.85 LINK OD1 ASP A 92 CD CD A 203 1555 1555 2.70 LINK OD2 ASP A 92 CD CD A 203 1555 1555 2.10 LINK OG1 THR A 94 CD CD A 203 1555 1555 2.32 LINK OXT ASP A 132 CD CD A 201 1555 1555 2.08 LINK CD CD A 201 O HOH A 310 1555 1555 2.12 LINK CD CD A 201 O HOH A 415 1555 1555 2.15 LINK CD CD A 201 O HOH A 434 1555 1555 2.03 LINK CD CD A 202 O HOH A 362 1555 1555 2.18 LINK CD CD A 202 O HOH A 430 1555 1555 2.07 LINK CD CD A 202 O HOH A 438 1555 1555 2.11 LINK CD CD A 202 O HOH A 445 1555 1555 2.14 LINK CD CD A 203 O HOH A 349 1555 1555 2.40 LINK CD CD A 203 O HOH A 454 1555 1555 2.60 LINK CD CD A 203 O AHOH A 472 1555 1555 2.05 LINK CD CD A 203 O BHOH A 472 1555 1555 2.35 CRYST1 36.696 36.782 94.786 90.00 99.24 90.00 I 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027251 0.000000 0.004432 0.00000 SCALE2 0.000000 0.027187 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010689 0.00000