HEADER VIRAL PROTEIN 30-NOV-23 8R9Z TITLE S1B DOMAIN OF THE PDCOV SPIKE GLYCOPROTEIN IN COMPLEX WITH THE 67B12 TITLE 2 AND 46E6 ANTIBODY FAB FRAGMENTS COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 67B12 ANTIBODY HEAVY CHAIN; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: 67B12 ANTIBODY LIGHT CHAIN; COMPND 11 CHAIN: C; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: 46E6 ANTIBODY HEAVY CHAIN; COMPND 15 CHAIN: H; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 5; COMPND 18 MOLECULE: 46E6 ANTIBODY HEAVY CHAIN; COMPND 19 CHAIN: L; COMPND 20 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PORCINE DELTACORONAVIRUS; SOURCE 3 ORGANISM_TAXID: 1586324; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 6 EXPRESSION_SYSTEM_CELL_LINE: 293F; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM_CELL_LINE: 293F; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 18 EXPRESSION_SYSTEM_CELL_LINE: 293F; SOURCE 19 MOL_ID: 4; SOURCE 20 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 21 ORGANISM_TAXID: 9606; SOURCE 22 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 23 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 24 EXPRESSION_SYSTEM_CELL_LINE: 293F; SOURCE 25 MOL_ID: 5; SOURCE 26 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 27 ORGANISM_TAXID: 9606; SOURCE 28 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 29 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 30 EXPRESSION_SYSTEM_CELL_LINE: 293F KEYWDS SPIKE, CORONAVIRUS, ANTIBODY, COMPLEX, RBD, S1B, VIRAL PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR O.DEBSKI-ANTONIAK,D.L.HURDISS REVDAT 2 03-JUL-24 8R9Z 1 JRNL REVDAT 1 05-JUN-24 8R9Z 0 JRNL AUTH W.DU,O.DEBSKI-ANTONIAK,D.DRABEK,R.VAN HAPEREN, JRNL AUTH 2 M.VAN DORTMONDT,J.VAN DER LEE,I.DRULYTE,F.J.M.VAN KUPPEVELD, JRNL AUTH 3 F.GROSVELD,D.L.HURDISS,B.J.BOSCH JRNL TITL NEUTRALIZING ANTIBODIES REVEAL CRYPTIC VULNERABILITIES AND JRNL TITL 2 INTERDOMAIN CROSSTALK IN THE PORCINE DELTACORONAVIRUS SPIKE JRNL TITL 3 PROTEIN. JRNL REF NAT COMMUN V. 15 5330 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 38909062 JRNL DOI 10.1038/S41467-024-49693-0 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : EPU, CRYOSPARC, CRYOSPARC, CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 6BFU REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : CROSS-CORRELATION COEFFICIENT REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : INITIAL FITTING WAS DONE USING CHIMERA REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.900 REMARK 3 NUMBER OF PARTICLES : 245068 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8R9Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-DEC-23. REMARK 100 THE DEPOSITION ID IS D_1292134912. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : PDCOV SPIKE S1B DOMAIN IN REMARK 245 COMPLEX WITH THE 67B12 AND 46E6 REMARK 245 ANTIBODY FAB FRAGMENTS REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.80 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON IV (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 750.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, H, L, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 378 CA - CB - SG ANGL. DEV. = 8.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 394 -158.11 -140.87 REMARK 500 THR B 104 70.60 56.70 REMARK 500 PRO B 106 72.40 -67.90 REMARK 500 THR C 51 -11.52 72.27 REMARK 500 GLU C 165 52.92 -94.99 REMARK 500 GLN C 166 71.89 55.39 REMARK 500 ASP C 167 122.15 -38.51 REMARK 500 ASP C 170 13.00 -145.38 REMARK 500 SER C 171 -168.31 -125.07 REMARK 500 THR C 172 -168.05 -124.78 REMARK 500 TYR L 32 76.83 -100.08 REMARK 500 ALA L 51 -9.61 70.26 REMARK 500 ALA L 84 -169.78 -161.84 REMARK 500 ASP L 151 -25.66 67.28 REMARK 500 ASN L 152 -2.29 -151.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-19017 RELATED DB: EMDB REMARK 900 S1B DOMAIN OF THE PDCOV SPIKE GLYCOPROTEIN IN COMPLEX WITH THE REMARK 900 67B12 AND 46E6 ANTIBODY FAB FRAGMENTS DBREF1 8R9Z A 305 418 UNP A0A513Q8I8_9NIDO DBREF2 8R9Z A A0A513Q8I8 18 131 DBREF 8R9Z B 2 224 PDB 8R9Z 8R9Z 2 224 DBREF 8R9Z C 1 209 PDB 8R9Z 8R9Z 1 209 DBREF 8R9Z H 1 222 PDB 8R9Z 8R9Z 1 222 DBREF 8R9Z L 1 212 PDB 8R9Z 8R9Z 1 212 SEQRES 1 A 114 LEU GLU VAL VAL GLN LEU ASN ILE SER ALA HIS MET ASP SEQRES 2 A 114 PHE GLY GLU ALA ARG LEU ASP SER VAL THR ILE ASN GLY SEQRES 3 A 114 ASN THR SER TYR CYS VAL THR LYS PRO TYR PHE ARG LEU SEQRES 4 A 114 GLU THR ASN PHE MET CYS THR GLY CYS THR MET ASN LEU SEQRES 5 A 114 ARG THR ASP THR CYS SER PHE ASP LEU SER ALA VAL ASN SEQRES 6 A 114 ASN GLY MET SER PHE SER GLN PHE CYS LEU SER THR GLU SEQRES 7 A 114 SER GLY ALA CYS GLU MET LYS ILE ILE VAL THR TYR VAL SEQRES 8 A 114 TRP ASN TYR LEU LEU ARG GLN ARG LEU TYR VAL THR ALA SEQRES 9 A 114 VAL GLU GLY GLN THR HIS THR GLY THR THR SEQRES 1 B 218 VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS PRO SEQRES 2 B 218 GLY SER SER VAL LYS VAL SER CYS LYS ALA SER GLY GLY SEQRES 3 B 218 THR PHE SER SER LEU ALA ILE SER TRP VAL ARG GLN ALA SEQRES 4 B 218 PRO GLY GLN GLY LEU GLU TRP MET GLY GLY ILE ILE PRO SEQRES 5 B 218 THR PHE GLY THR THR ASN TYR ALA GLN ASN PHE ARG GLY SEQRES 6 B 218 ARG VAL THR ILE THR ALA ASP LYS SER THR SER THR ALA SEQRES 7 B 218 TYR MET GLU LEU SER THR LEU ILE SER GLU ASP THR ALA SEQRES 8 B 218 VAL TYR PHE CYS ALA ARG GLU ARG SER THR ASP THR TRP SEQRES 9 B 218 PRO GLY ASP ALA PHE ASP ILE TRP GLY GLN GLY THR MET SEQRES 10 B 218 VAL THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL SEQRES 11 B 218 PHE PRO LEU ALA PRO SER SER GLY THR ALA ALA LEU GLY SEQRES 12 B 218 CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SEQRES 13 B 218 SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR SEQRES 14 B 218 PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SEQRES 15 B 218 SER SER VAL VAL THR VAL PRO SER SER SER LEU LEU GLY SEQRES 16 B 218 GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN SEQRES 17 B 218 THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SEQRES 1 C 209 GLU ILE LEU MET THR GLN SER PRO ALA THR LEU SER VAL SEQRES 2 C 209 SER PRO GLY GLU ARG ALA THR LEU SER CYS TRP ALA SER SEQRES 3 C 209 GLN SER VAL ASN SER LYS LEU ALA TRP TYR GLN GLN LYS SEQRES 4 C 209 PRO GLY GLN ALA PRO ARG LEU LEU ILE TYR ASP THR SER SEQRES 5 C 209 THR ARG ALA THR GLY ILE PRO ALA ARG PHE SER GLY SER SEQRES 6 C 209 GLY SER GLY ALA GLU PHE THR LEU THR ILE SER SER LEU SEQRES 7 C 209 GLN SER GLU ASP PHE ALA VAL TYR TYR CYS GLN GLN TYR SEQRES 8 C 209 ASN TYR TRP PRO TYR THR PHE GLY GLN GLY THR LYS LEU SEQRES 9 C 209 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 C 209 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 C 209 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 C 209 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 C 209 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 C 209 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 C 209 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 C 209 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 C 209 PHE SEQRES 1 H 219 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY VAL VAL GLN SEQRES 2 H 219 PRO GLY ARG SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 219 PHE THR PHE SER SER TYR ALA MET HIS TRP VAL ARG GLN SEQRES 4 H 219 ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA VAL ILE TRP SEQRES 5 H 219 ARG ASP GLY SER ASN GLU PHE TYR ALA ASP SER VAL LYS SEQRES 6 H 219 GLY ARG PHE THR ILE SER ARG ASP ASN SER LYS ASP THR SEQRES 7 H 219 LEU TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 H 219 ALA VAL TYR TYR CYS ALA ARG ARG GLY ILE ILE MET VAL SEQRES 9 H 219 ARG GLY LEU LEU GLY TYR TRP GLY GLN GLY THR LEU VAL SEQRES 10 H 219 THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE SEQRES 11 H 219 PRO LEU ALA PRO SER SER LYS SER GLY THR ALA ALA LEU SEQRES 12 H 219 GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR SEQRES 13 H 219 VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS SEQRES 14 H 219 THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER SEQRES 15 H 219 LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY SEQRES 16 H 219 THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER SEQRES 17 H 219 ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SEQRES 1 L 212 ASP ILE GLN MET THR GLN SER PRO PRO SER LEU SER ALA SEQRES 2 L 212 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 L 212 GLN GLY ILE SER ASN TYR LEU ALA TRP HIS GLN GLN LYS SEQRES 4 L 212 PRO GLY LYS VAL PRO LYS LEU LEU ILE TYR THR ALA SER SEQRES 5 L 212 THR LEU GLN SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 212 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 212 GLN PRO GLU ASP VAL ALA THR TYR TYR CYS GLN LYS TYR SEQRES 8 L 212 ASN SER ALA PRO PHE THR PHE GLY PRO GLY THR LYS VAL SEQRES 9 L 212 ASP ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 L 212 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 L 212 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 L 212 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 L 212 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 L 212 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 L 212 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 L 212 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 L 212 PHE ASN ARG GLY HET NAG D 1 14 HET NAG D 2 14 HET NAG A 501 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 6 NAG 3(C8 H15 N O6) HELIX 1 AA1 ASP A 364 GLY A 371 5 8 HELIX 2 AA2 ILE B 87 THR B 91 5 5 HELIX 3 AA3 SER C 121 GLY C 128 1 8 HELIX 4 AA4 LYS C 183 LYS C 188 1 6 HELIX 5 AA5 THR H 28 TYR H 32 5 5 HELIX 6 AA6 ARG H 87 THR H 91 5 5 HELIX 7 AA7 SER H 164 ALA H 166 5 3 HELIX 8 AA8 SER H 195 GLY H 198 5 4 HELIX 9 AA9 GLN L 79 VAL L 83 5 5 HELIX 10 AB1 SER L 121 SER L 127 1 7 HELIX 11 AB2 LYS L 183 LYS L 188 1 6 SHEET 1 AA1 5 GLU A 306 LEU A 310 0 SHEET 2 AA1 5 TYR A 340 THR A 345 1 O ARG A 342 N GLU A 306 SHEET 3 AA1 5 LEU A 404 GLY A 416 1 O THR A 415 N PHE A 341 SHEET 4 AA1 5 CYS A 386 THR A 393 -1 N CYS A 386 O VAL A 406 SHEET 5 AA1 5 THR A 353 THR A 358 -1 N THR A 353 O THR A 393 SHEET 1 AA2 5 SER A 333 CYS A 335 0 SHEET 2 AA2 5 SER A 373 SER A 380 -1 O LEU A 379 N TYR A 334 SHEET 3 AA2 5 LEU A 404 GLY A 416 -1 O HIS A 414 N PHE A 374 SHEET 4 AA2 5 CYS A 386 THR A 393 -1 N CYS A 386 O VAL A 406 SHEET 5 AA2 5 ASN A 397 LEU A 399 -1 O TYR A 398 N VAL A 392 SHEET 1 AA3 2 SER A 313 MET A 316 0 SHEET 2 AA3 2 ALA A 321 SER A 325 -1 O ASP A 324 N SER A 313 SHEET 1 AA4 4 GLN B 3 GLN B 6 0 SHEET 2 AA4 4 SER B 17 SER B 25 -1 O LYS B 23 N VAL B 5 SHEET 3 AA4 4 THR B 78 SER B 84 -1 O MET B 81 N VAL B 20 SHEET 4 AA4 4 VAL B 68 ASP B 73 -1 N THR B 71 O TYR B 80 SHEET 1 AA5 6 GLU B 10 LYS B 12 0 SHEET 2 AA5 6 THR B 117 VAL B 121 1 O THR B 120 N LYS B 12 SHEET 3 AA5 6 ALA B 92 GLU B 99 -1 N TYR B 94 O THR B 117 SHEET 4 AA5 6 ILE B 34 GLN B 39 -1 N VAL B 37 O PHE B 95 SHEET 5 AA5 6 LEU B 45 ILE B 52 -1 O ILE B 51 N ILE B 34 SHEET 6 AA5 6 THR B 57 TYR B 60 -1 O ASN B 59 N GLY B 50 SHEET 1 AA6 4 GLU B 10 LYS B 12 0 SHEET 2 AA6 4 THR B 117 VAL B 121 1 O THR B 120 N LYS B 12 SHEET 3 AA6 4 ALA B 92 GLU B 99 -1 N TYR B 94 O THR B 117 SHEET 4 AA6 4 PHE B 110 TRP B 113 -1 O ILE B 112 N ARG B 98 SHEET 1 AA7 4 SER B 130 LEU B 134 0 SHEET 2 AA7 4 ALA B 146 TYR B 155 -1 O LEU B 151 N PHE B 132 SHEET 3 AA7 4 TYR B 186 VAL B 194 -1 O VAL B 192 N LEU B 148 SHEET 4 AA7 4 VAL B 173 THR B 175 -1 N HIS B 174 O VAL B 191 SHEET 1 AA8 4 SER B 130 LEU B 134 0 SHEET 2 AA8 4 ALA B 146 TYR B 155 -1 O LEU B 151 N PHE B 132 SHEET 3 AA8 4 TYR B 186 VAL B 194 -1 O VAL B 192 N LEU B 148 SHEET 4 AA8 4 VAL B 179 LEU B 180 -1 N VAL B 179 O SER B 187 SHEET 1 AA9 3 THR B 161 TRP B 164 0 SHEET 2 AA9 3 ILE B 205 HIS B 210 -1 O ASN B 207 N SER B 163 SHEET 3 AA9 3 THR B 215 LYS B 220 -1 O THR B 215 N HIS B 210 SHEET 1 AB1 4 THR C 5 SER C 7 0 SHEET 2 AB1 4 ALA C 19 TRP C 24 -1 O TRP C 24 N THR C 5 SHEET 3 AB1 4 GLU C 70 ILE C 75 -1 O LEU C 73 N LEU C 21 SHEET 4 AB1 4 PHE C 62 SER C 67 -1 N SER C 63 O THR C 74 SHEET 1 AB2 6 THR C 10 VAL C 13 0 SHEET 2 AB2 6 THR C 102 ILE C 106 1 O LYS C 103 N LEU C 11 SHEET 3 AB2 6 VAL C 85 GLN C 90 -1 N TYR C 86 O THR C 102 SHEET 4 AB2 6 LEU C 33 GLN C 38 -1 N ALA C 34 O GLN C 89 SHEET 5 AB2 6 ARG C 45 TYR C 49 -1 O ARG C 45 N GLN C 37 SHEET 6 AB2 6 THR C 53 ARG C 54 -1 O THR C 53 N TYR C 49 SHEET 1 AB3 4 THR C 10 VAL C 13 0 SHEET 2 AB3 4 THR C 102 ILE C 106 1 O LYS C 103 N LEU C 11 SHEET 3 AB3 4 VAL C 85 GLN C 90 -1 N TYR C 86 O THR C 102 SHEET 4 AB3 4 THR C 97 PHE C 98 -1 O THR C 97 N GLN C 90 SHEET 1 AB4 4 SER C 114 PHE C 118 0 SHEET 2 AB4 4 THR C 129 PHE C 139 -1 O LEU C 135 N PHE C 116 SHEET 3 AB4 4 TYR C 173 SER C 182 -1 O LEU C 175 N LEU C 136 SHEET 4 AB4 4 SER C 159 VAL C 163 -1 N GLN C 160 O THR C 178 SHEET 1 AB5 4 ALA C 153 LEU C 154 0 SHEET 2 AB5 4 LYS C 145 VAL C 150 -1 N VAL C 150 O ALA C 153 SHEET 3 AB5 4 TYR C 192 THR C 197 -1 O ALA C 193 N LYS C 149 SHEET 4 AB5 4 VAL C 205 SER C 208 -1 O VAL C 205 N VAL C 196 SHEET 1 AB6 4 GLN H 3 SER H 7 0 SHEET 2 AB6 4 LEU H 18 SER H 25 -1 O SER H 25 N GLN H 3 SHEET 3 AB6 4 THR H 78 MET H 83 -1 O MET H 83 N LEU H 18 SHEET 4 AB6 4 PHE H 68 ASP H 73 -1 N THR H 69 O GLN H 82 SHEET 1 AB7 6 VAL H 11 VAL H 12 0 SHEET 2 AB7 6 THR H 115 VAL H 119 1 O THR H 118 N VAL H 12 SHEET 3 AB7 6 ALA H 92 ARG H 99 -1 N TYR H 94 O THR H 115 SHEET 4 AB7 6 MET H 34 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 AB7 6 LEU H 45 ILE H 51 -1 O VAL H 48 N TRP H 36 SHEET 6 AB7 6 PHE H 59 TYR H 60 -1 O PHE H 59 N VAL H 50 SHEET 1 AB8 4 VAL H 11 VAL H 12 0 SHEET 2 AB8 4 THR H 115 VAL H 119 1 O THR H 118 N VAL H 12 SHEET 3 AB8 4 ALA H 92 ARG H 99 -1 N TYR H 94 O THR H 115 SHEET 4 AB8 4 LEU H 108 TYR H 110 -1 O TYR H 110 N ARG H 98 SHEET 1 AB9 4 VAL H 129 PRO H 131 0 SHEET 2 AB9 4 CYS H 148 TYR H 153 -1 O LEU H 149 N PHE H 130 SHEET 3 AB9 4 TYR H 184 PRO H 193 -1 O TYR H 184 N TYR H 153 SHEET 4 AB9 4 VAL H 171 THR H 173 -1 N HIS H 172 O VAL H 189 SHEET 1 AC1 3 THR H 143 ALA H 145 0 SHEET 2 AC1 3 TYR H 184 PRO H 193 -1 O VAL H 192 N ALA H 144 SHEET 3 AC1 3 VAL H 177 LEU H 178 -1 N VAL H 177 O SER H 185 SHEET 1 AC2 3 VAL H 158 TRP H 162 0 SHEET 2 AC2 3 TYR H 202 HIS H 208 -1 O ASN H 205 N SER H 161 SHEET 3 AC2 3 THR H 213 VAL H 219 -1 O LYS H 217 N CYS H 204 SHEET 1 AC3 4 MET L 4 SER L 7 0 SHEET 2 AC3 4 VAL L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AC3 4 ASP L 70 ILE L 75 -1 O LEU L 73 N ILE L 21 SHEET 4 AC3 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AC4 6 SER L 10 ALA L 13 0 SHEET 2 AC4 6 THR L 102 ILE L 106 1 O LYS L 103 N LEU L 11 SHEET 3 AC4 6 THR L 85 LYS L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AC4 6 LEU L 33 GLN L 38 -1 N HIS L 36 O TYR L 87 SHEET 5 AC4 6 LYS L 45 TYR L 49 -1 O LYS L 45 N GLN L 37 SHEET 6 AC4 6 THR L 53 LEU L 54 -1 O THR L 53 N TYR L 49 SHEET 1 AC5 4 SER L 114 PHE L 118 0 SHEET 2 AC5 4 THR L 129 PHE L 139 -1 O ASN L 137 N SER L 114 SHEET 3 AC5 4 TYR L 173 SER L 182 -1 O LEU L 175 N LEU L 136 SHEET 4 AC5 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 AC6 3 LYS L 145 VAL L 150 0 SHEET 2 AC6 3 VAL L 191 THR L 197 -1 O ALA L 193 N LYS L 149 SHEET 3 AC6 3 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SSBOND 1 CYS A 335 CYS A 378 1555 1555 2.05 SSBOND 2 CYS A 349 CYS A 352 1555 1555 2.03 SSBOND 3 CYS A 361 CYS A 386 1555 1555 2.03 SSBOND 4 CYS B 22 CYS B 96 1555 1555 2.03 SSBOND 5 CYS B 150 CYS B 206 1555 1555 2.03 SSBOND 6 CYS C 23 CYS C 88 1555 1555 2.03 SSBOND 7 CYS C 134 CYS C 194 1555 1555 2.03 SSBOND 8 CYS H 22 CYS H 96 1555 1555 2.03 SSBOND 9 CYS H 148 CYS H 204 1555 1555 2.03 SSBOND 10 CYS L 23 CYS L 88 1555 1555 2.03 SSBOND 11 CYS L 134 CYS L 194 1555 1555 2.03 LINK ND2 ASN A 311 C1 NAG D 1 1555 1555 1.44 LINK ND2 ASN A 331 C1 NAG A 501 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 CISPEP 1 SER C 7 PRO C 8 0 -3.88 CISPEP 2 TRP C 94 PRO C 95 0 -4.10 CISPEP 3 TYR C 140 PRO C 141 0 -0.53 CISPEP 4 SER L 7 PRO L 8 0 -2.76 CISPEP 5 ALA L 94 PRO L 95 0 2.49 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000