data_8RBJ # _entry.id 8RBJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.406 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8RBJ pdb_00008rbj 10.2210/pdb8rbj/pdb WWPDB D_1292134880 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-06-18 ? 2 'Structure model' 1 1 2025-07-30 ? 3 'Structure model' 1 2 2025-10-01 ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.pdbx_database_id_DOI' 6 2 'Structure model' '_citation.pdbx_database_id_PubMed' 7 2 'Structure model' '_citation.title' 8 2 'Structure model' '_citation.year' 9 3 'Structure model' '_citation.journal_volume' 10 3 'Structure model' '_citation.page_first' 11 3 'Structure model' '_citation.page_last' 12 3 'Structure model' '_citation_author.identifier_ORCID' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8RBJ _pdbx_database_status.recvd_initial_deposition_date 2023-12-04 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email jirka.peschek@bzh.uni-heidelberg.de _pdbx_contact_author.name_first Jirka _pdbx_contact_author.name_last Peschek _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-8158-9301 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kopp, J.' 1 0000-0001-5633-7399 'Koehler, S.' 2 0000-0002-2400-8213 'Peschek, J.' 3 0000-0001-8158-9301 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1545-9985 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 32 _citation.language ? _citation.page_first 1657 _citation.page_last 1668 _citation.title 'Structure of fungal tRNA ligase Trl1 with RNA reveals conserved substrate-binding principles.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41594-025-01589-3 _citation.pdbx_database_id_PubMed 40563009 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kohler, S.' 1 ? primary 'Kopp, J.' 2 ? primary 'Maiti, S.' 3 ? primary 'Bujnicki, J.M.' 4 ? primary 'Peschek, J.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'tRNA ligase' 48873.883 1 ? ? ? ? 2 polymer syn RNA 2221.379 2 ? ? ? ? 3 non-polymer syn 'ADENOSINE MONOPHOSPHATE' 347.221 1 ? ? ? ? 4 water nat water 18.015 113 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MGSSHHHHHHSSGLVPRGSHMDGTAEKQRDSLASRYKASTDYAKDAEGLTAPYVSQDPQETAALVRALDDAAKKGKKSGG FSVKKTRYAVASSPTGAEVDSWRFNDWDYKKPDLPTYARGLFTTRTQHGVPEIAVRGYDKFFNIDETRDTAWSAIRERTK GPYELTLKENGCIIFISGLEDGTLLVCSKHSTGDRSDVALSHSSAGEKHLEAQLERIGKTKEELARELRKRNATAVAELC DDSFEEHILAYGPDKAGLYLHGINLNIPEFITYPSPLVQKFAEDWGFRKTGLIIIDNIDDVKAFLEEVAETGAHDGRDVE GFVIRCKKSTNPGVGPYHDWFFKYKFEEPYLMYRQWRECTKALISGKQPKIKKHVKITEEYLLYARKRLAADPKLAKLYN QNHGIIKLRNDFLEYKNMKGTDAANLEDDGAASV ; ;MGSSHHHHHHSSGLVPRGSHMDGTAEKQRDSLASRYKASTDYAKDAEGLTAPYVSQDPQETAALVRALDDAAKKGKKSGG FSVKKTRYAVASSPTGAEVDSWRFNDWDYKKPDLPTYARGLFTTRTQHGVPEIAVRGYDKFFNIDETRDTAWSAIRERTK GPYELTLKENGCIIFISGLEDGTLLVCSKHSTGDRSDVALSHSSAGEKHLEAQLERIGKTKEELARELRKRNATAVAELC DDSFEEHILAYGPDKAGLYLHGINLNIPEFITYPSPLVQKFAEDWGFRKTGLIIIDNIDDVKAFLEEVAETGAHDGRDVE GFVIRCKKSTNPGVGPYHDWFFKYKFEEPYLMYRQWRECTKALISGKQPKIKKHVKITEEYLLYARKRLAADPKLAKLYN QNHGIIKLRNDFLEYKNMKGTDAANLEDDGAASV ; A ? 2 polyribonucleotide no no AUCUGGA AUCUGGA C,B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ADENOSINE MONOPHOSPHATE' AMP 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 ASP n 1 23 GLY n 1 24 THR n 1 25 ALA n 1 26 GLU n 1 27 LYS n 1 28 GLN n 1 29 ARG n 1 30 ASP n 1 31 SER n 1 32 LEU n 1 33 ALA n 1 34 SER n 1 35 ARG n 1 36 TYR n 1 37 LYS n 1 38 ALA n 1 39 SER n 1 40 THR n 1 41 ASP n 1 42 TYR n 1 43 ALA n 1 44 LYS n 1 45 ASP n 1 46 ALA n 1 47 GLU n 1 48 GLY n 1 49 LEU n 1 50 THR n 1 51 ALA n 1 52 PRO n 1 53 TYR n 1 54 VAL n 1 55 SER n 1 56 GLN n 1 57 ASP n 1 58 PRO n 1 59 GLN n 1 60 GLU n 1 61 THR n 1 62 ALA n 1 63 ALA n 1 64 LEU n 1 65 VAL n 1 66 ARG n 1 67 ALA n 1 68 LEU n 1 69 ASP n 1 70 ASP n 1 71 ALA n 1 72 ALA n 1 73 LYS n 1 74 LYS n 1 75 GLY n 1 76 LYS n 1 77 LYS n 1 78 SER n 1 79 GLY n 1 80 GLY n 1 81 PHE n 1 82 SER n 1 83 VAL n 1 84 LYS n 1 85 LYS n 1 86 THR n 1 87 ARG n 1 88 TYR n 1 89 ALA n 1 90 VAL n 1 91 ALA n 1 92 SER n 1 93 SER n 1 94 PRO n 1 95 THR n 1 96 GLY n 1 97 ALA n 1 98 GLU n 1 99 VAL n 1 100 ASP n 1 101 SER n 1 102 TRP n 1 103 ARG n 1 104 PHE n 1 105 ASN n 1 106 ASP n 1 107 TRP n 1 108 ASP n 1 109 TYR n 1 110 LYS n 1 111 LYS n 1 112 PRO n 1 113 ASP n 1 114 LEU n 1 115 PRO n 1 116 THR n 1 117 TYR n 1 118 ALA n 1 119 ARG n 1 120 GLY n 1 121 LEU n 1 122 PHE n 1 123 THR n 1 124 THR n 1 125 ARG n 1 126 THR n 1 127 GLN n 1 128 HIS n 1 129 GLY n 1 130 VAL n 1 131 PRO n 1 132 GLU n 1 133 ILE n 1 134 ALA n 1 135 VAL n 1 136 ARG n 1 137 GLY n 1 138 TYR n 1 139 ASP n 1 140 LYS n 1 141 PHE n 1 142 PHE n 1 143 ASN n 1 144 ILE n 1 145 ASP n 1 146 GLU n 1 147 THR n 1 148 ARG n 1 149 ASP n 1 150 THR n 1 151 ALA n 1 152 TRP n 1 153 SER n 1 154 ALA n 1 155 ILE n 1 156 ARG n 1 157 GLU n 1 158 ARG n 1 159 THR n 1 160 LYS n 1 161 GLY n 1 162 PRO n 1 163 TYR n 1 164 GLU n 1 165 LEU n 1 166 THR n 1 167 LEU n 1 168 LYS n 1 169 GLU n 1 170 ASN n 1 171 GLY n 1 172 CYS n 1 173 ILE n 1 174 ILE n 1 175 PHE n 1 176 ILE n 1 177 SER n 1 178 GLY n 1 179 LEU n 1 180 GLU n 1 181 ASP n 1 182 GLY n 1 183 THR n 1 184 LEU n 1 185 LEU n 1 186 VAL n 1 187 CYS n 1 188 SER n 1 189 LYS n 1 190 HIS n 1 191 SER n 1 192 THR n 1 193 GLY n 1 194 ASP n 1 195 ARG n 1 196 SER n 1 197 ASP n 1 198 VAL n 1 199 ALA n 1 200 LEU n 1 201 SER n 1 202 HIS n 1 203 SER n 1 204 SER n 1 205 ALA n 1 206 GLY n 1 207 GLU n 1 208 LYS n 1 209 HIS n 1 210 LEU n 1 211 GLU n 1 212 ALA n 1 213 GLN n 1 214 LEU n 1 215 GLU n 1 216 ARG n 1 217 ILE n 1 218 GLY n 1 219 LYS n 1 220 THR n 1 221 LYS n 1 222 GLU n 1 223 GLU n 1 224 LEU n 1 225 ALA n 1 226 ARG n 1 227 GLU n 1 228 LEU n 1 229 ARG n 1 230 LYS n 1 231 ARG n 1 232 ASN n 1 233 ALA n 1 234 THR n 1 235 ALA n 1 236 VAL n 1 237 ALA n 1 238 GLU n 1 239 LEU n 1 240 CYS n 1 241 ASP n 1 242 ASP n 1 243 SER n 1 244 PHE n 1 245 GLU n 1 246 GLU n 1 247 HIS n 1 248 ILE n 1 249 LEU n 1 250 ALA n 1 251 TYR n 1 252 GLY n 1 253 PRO n 1 254 ASP n 1 255 LYS n 1 256 ALA n 1 257 GLY n 1 258 LEU n 1 259 TYR n 1 260 LEU n 1 261 HIS n 1 262 GLY n 1 263 ILE n 1 264 ASN n 1 265 LEU n 1 266 ASN n 1 267 ILE n 1 268 PRO n 1 269 GLU n 1 270 PHE n 1 271 ILE n 1 272 THR n 1 273 TYR n 1 274 PRO n 1 275 SER n 1 276 PRO n 1 277 LEU n 1 278 VAL n 1 279 GLN n 1 280 LYS n 1 281 PHE n 1 282 ALA n 1 283 GLU n 1 284 ASP n 1 285 TRP n 1 286 GLY n 1 287 PHE n 1 288 ARG n 1 289 LYS n 1 290 THR n 1 291 GLY n 1 292 LEU n 1 293 ILE n 1 294 ILE n 1 295 ILE n 1 296 ASP n 1 297 ASN n 1 298 ILE n 1 299 ASP n 1 300 ASP n 1 301 VAL n 1 302 LYS n 1 303 ALA n 1 304 PHE n 1 305 LEU n 1 306 GLU n 1 307 GLU n 1 308 VAL n 1 309 ALA n 1 310 GLU n 1 311 THR n 1 312 GLY n 1 313 ALA n 1 314 HIS n 1 315 ASP n 1 316 GLY n 1 317 ARG n 1 318 ASP n 1 319 VAL n 1 320 GLU n 1 321 GLY n 1 322 PHE n 1 323 VAL n 1 324 ILE n 1 325 ARG n 1 326 CYS n 1 327 LYS n 1 328 LYS n 1 329 SER n 1 330 THR n 1 331 ASN n 1 332 PRO n 1 333 GLY n 1 334 VAL n 1 335 GLY n 1 336 PRO n 1 337 TYR n 1 338 HIS n 1 339 ASP n 1 340 TRP n 1 341 PHE n 1 342 PHE n 1 343 LYS n 1 344 TYR n 1 345 LYS n 1 346 PHE n 1 347 GLU n 1 348 GLU n 1 349 PRO n 1 350 TYR n 1 351 LEU n 1 352 MET n 1 353 TYR n 1 354 ARG n 1 355 GLN n 1 356 TRP n 1 357 ARG n 1 358 GLU n 1 359 CYS n 1 360 THR n 1 361 LYS n 1 362 ALA n 1 363 LEU n 1 364 ILE n 1 365 SER n 1 366 GLY n 1 367 LYS n 1 368 GLN n 1 369 PRO n 1 370 LYS n 1 371 ILE n 1 372 LYS n 1 373 LYS n 1 374 HIS n 1 375 VAL n 1 376 LYS n 1 377 ILE n 1 378 THR n 1 379 GLU n 1 380 GLU n 1 381 TYR n 1 382 LEU n 1 383 LEU n 1 384 TYR n 1 385 ALA n 1 386 ARG n 1 387 LYS n 1 388 ARG n 1 389 LEU n 1 390 ALA n 1 391 ALA n 1 392 ASP n 1 393 PRO n 1 394 LYS n 1 395 LEU n 1 396 ALA n 1 397 LYS n 1 398 LEU n 1 399 TYR n 1 400 ASN n 1 401 GLN n 1 402 ASN n 1 403 HIS n 1 404 GLY n 1 405 ILE n 1 406 ILE n 1 407 LYS n 1 408 LEU n 1 409 ARG n 1 410 ASN n 1 411 ASP n 1 412 PHE n 1 413 LEU n 1 414 GLU n 1 415 TYR n 1 416 LYS n 1 417 ASN n 1 418 MET n 1 419 LYS n 1 420 GLY n 1 421 THR n 1 422 ASP n 1 423 ALA n 1 424 ALA n 1 425 ASN n 1 426 LEU n 1 427 GLU n 1 428 ASP n 1 429 ASP n 1 430 GLY n 1 431 ALA n 1 432 ALA n 1 433 SER n 1 434 VAL n 2 1 A n 2 2 U n 2 3 C n 2 4 U n 2 5 G n 2 6 G n 2 7 A n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 434 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CTHT_0034810 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermochaetoides thermophila' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 209285 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 7 _pdbx_entity_src_syn.organism_scientific 'Saccharomyces cerevisiae' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 4932 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 AMP non-polymer . 'ADENOSINE MONOPHOSPHATE' ? 'C10 H14 N5 O7 P' 347.221 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -19 ? ? ? A . n A 1 2 GLY 2 -18 ? ? ? A . n A 1 3 SER 3 -17 ? ? ? A . n A 1 4 SER 4 -16 ? ? ? A . n A 1 5 HIS 5 -15 ? ? ? A . n A 1 6 HIS 6 -14 ? ? ? A . n A 1 7 HIS 7 -13 ? ? ? A . n A 1 8 HIS 8 -12 ? ? ? A . n A 1 9 HIS 9 -11 ? ? ? A . n A 1 10 HIS 10 -10 ? ? ? A . n A 1 11 SER 11 -9 ? ? ? A . n A 1 12 SER 12 -8 ? ? ? A . n A 1 13 GLY 13 -7 ? ? ? A . n A 1 14 LEU 14 -6 ? ? ? A . n A 1 15 VAL 15 -5 ? ? ? A . n A 1 16 PRO 16 -4 ? ? ? A . n A 1 17 ARG 17 -3 ? ? ? A . n A 1 18 GLY 18 -2 ? ? ? A . n A 1 19 SER 19 -1 ? ? ? A . n A 1 20 HIS 20 0 ? ? ? A . n A 1 21 MET 21 1 ? ? ? A . n A 1 22 ASP 22 2 ? ? ? A . n A 1 23 GLY 23 3 ? ? ? A . n A 1 24 THR 24 4 ? ? ? A . n A 1 25 ALA 25 5 ? ? ? A . n A 1 26 GLU 26 6 ? ? ? A . n A 1 27 LYS 27 7 ? ? ? A . n A 1 28 GLN 28 8 ? ? ? A . n A 1 29 ARG 29 9 ? ? ? A . n A 1 30 ASP 30 10 ? ? ? A . n A 1 31 SER 31 11 11 SER SER A . n A 1 32 LEU 32 12 12 LEU LEU A . n A 1 33 ALA 33 13 13 ALA ALA A . n A 1 34 SER 34 14 14 SER SER A . n A 1 35 ARG 35 15 15 ARG ARG A . n A 1 36 TYR 36 16 16 TYR TYR A . n A 1 37 LYS 37 17 17 LYS LYS A . n A 1 38 ALA 38 18 18 ALA ALA A . n A 1 39 SER 39 19 19 SER SER A . n A 1 40 THR 40 20 20 THR THR A . n A 1 41 ASP 41 21 21 ASP ASP A . n A 1 42 TYR 42 22 22 TYR TYR A . n A 1 43 ALA 43 23 23 ALA ALA A . n A 1 44 LYS 44 24 24 LYS LYS A . n A 1 45 ASP 45 25 25 ASP ASP A . n A 1 46 ALA 46 26 26 ALA ALA A . n A 1 47 GLU 47 27 27 GLU GLU A . n A 1 48 GLY 48 28 28 GLY GLY A . n A 1 49 LEU 49 29 29 LEU LEU A . n A 1 50 THR 50 30 30 THR THR A . n A 1 51 ALA 51 31 31 ALA ALA A . n A 1 52 PRO 52 32 32 PRO PRO A . n A 1 53 TYR 53 33 33 TYR TYR A . n A 1 54 VAL 54 34 34 VAL VAL A . n A 1 55 SER 55 35 35 SER SER A . n A 1 56 GLN 56 36 36 GLN GLN A . n A 1 57 ASP 57 37 37 ASP ASP A . n A 1 58 PRO 58 38 38 PRO PRO A . n A 1 59 GLN 59 39 39 GLN GLN A . n A 1 60 GLU 60 40 40 GLU GLU A . n A 1 61 THR 61 41 41 THR THR A . n A 1 62 ALA 62 42 42 ALA ALA A . n A 1 63 ALA 63 43 43 ALA ALA A . n A 1 64 LEU 64 44 44 LEU LEU A . n A 1 65 VAL 65 45 45 VAL VAL A . n A 1 66 ARG 66 46 46 ARG ARG A . n A 1 67 ALA 67 47 47 ALA ALA A . n A 1 68 LEU 68 48 48 LEU LEU A . n A 1 69 ASP 69 49 49 ASP ASP A . n A 1 70 ASP 70 50 50 ASP ASP A . n A 1 71 ALA 71 51 51 ALA ALA A . n A 1 72 ALA 72 52 52 ALA ALA A . n A 1 73 LYS 73 53 53 LYS LYS A . n A 1 74 LYS 74 54 54 LYS LYS A . n A 1 75 GLY 75 55 55 GLY GLY A . n A 1 76 LYS 76 56 ? ? ? A . n A 1 77 LYS 77 57 ? ? ? A . n A 1 78 SER 78 58 ? ? ? A . n A 1 79 GLY 79 59 ? ? ? A . n A 1 80 GLY 80 60 ? ? ? A . n A 1 81 PHE 81 61 61 PHE PHE A . n A 1 82 SER 82 62 62 SER SER A . n A 1 83 VAL 83 63 63 VAL VAL A . n A 1 84 LYS 84 64 64 LYS LYS A . n A 1 85 LYS 85 65 65 LYS LYS A . n A 1 86 THR 86 66 66 THR THR A . n A 1 87 ARG 87 67 67 ARG ARG A . n A 1 88 TYR 88 68 68 TYR TYR A . n A 1 89 ALA 89 69 69 ALA ALA A . n A 1 90 VAL 90 70 70 VAL VAL A . n A 1 91 ALA 91 71 71 ALA ALA A . n A 1 92 SER 92 72 72 SER SER A . n A 1 93 SER 93 73 73 SER SER A . n A 1 94 PRO 94 74 74 PRO PRO A . n A 1 95 THR 95 75 75 THR THR A . n A 1 96 GLY 96 76 76 GLY GLY A . n A 1 97 ALA 97 77 77 ALA ALA A . n A 1 98 GLU 98 78 78 GLU GLU A . n A 1 99 VAL 99 79 79 VAL VAL A . n A 1 100 ASP 100 80 80 ASP ASP A . n A 1 101 SER 101 81 81 SER SER A . n A 1 102 TRP 102 82 82 TRP TRP A . n A 1 103 ARG 103 83 83 ARG ARG A . n A 1 104 PHE 104 84 84 PHE PHE A . n A 1 105 ASN 105 85 85 ASN ASN A . n A 1 106 ASP 106 86 86 ASP ASP A . n A 1 107 TRP 107 87 87 TRP TRP A . n A 1 108 ASP 108 88 88 ASP ASP A . n A 1 109 TYR 109 89 89 TYR TYR A . n A 1 110 LYS 110 90 90 LYS LYS A . n A 1 111 LYS 111 91 91 LYS LYS A . n A 1 112 PRO 112 92 92 PRO PRO A . n A 1 113 ASP 113 93 93 ASP ASP A . n A 1 114 LEU 114 94 94 LEU LEU A . n A 1 115 PRO 115 95 95 PRO PRO A . n A 1 116 THR 116 96 96 THR THR A . n A 1 117 TYR 117 97 97 TYR TYR A . n A 1 118 ALA 118 98 98 ALA ALA A . n A 1 119 ARG 119 99 99 ARG ARG A . n A 1 120 GLY 120 100 100 GLY GLY A . n A 1 121 LEU 121 101 101 LEU LEU A . n A 1 122 PHE 122 102 102 PHE PHE A . n A 1 123 THR 123 103 103 THR THR A . n A 1 124 THR 124 104 104 THR THR A . n A 1 125 ARG 125 105 105 ARG ARG A . n A 1 126 THR 126 106 106 THR THR A . n A 1 127 GLN 127 107 107 GLN GLN A . n A 1 128 HIS 128 108 108 HIS HIS A . n A 1 129 GLY 129 109 109 GLY GLY A . n A 1 130 VAL 130 110 110 VAL VAL A . n A 1 131 PRO 131 111 111 PRO PRO A . n A 1 132 GLU 132 112 112 GLU GLU A . n A 1 133 ILE 133 113 113 ILE ILE A . n A 1 134 ALA 134 114 114 ALA ALA A . n A 1 135 VAL 135 115 115 VAL VAL A . n A 1 136 ARG 136 116 116 ARG ARG A . n A 1 137 GLY 137 117 117 GLY GLY A . n A 1 138 TYR 138 118 118 TYR TYR A . n A 1 139 ASP 139 119 119 ASP ASP A . n A 1 140 LYS 140 120 120 LYS LYS A . n A 1 141 PHE 141 121 121 PHE PHE A . n A 1 142 PHE 142 122 122 PHE PHE A . n A 1 143 ASN 143 123 123 ASN ASN A . n A 1 144 ILE 144 124 124 ILE ILE A . n A 1 145 ASP 145 125 125 ASP ASP A . n A 1 146 GLU 146 126 126 GLU GLU A . n A 1 147 THR 147 127 127 THR THR A . n A 1 148 ARG 148 128 128 ARG ARG A . n A 1 149 ASP 149 129 129 ASP ASP A . n A 1 150 THR 150 130 130 THR THR A . n A 1 151 ALA 151 131 131 ALA ALA A . n A 1 152 TRP 152 132 132 TRP TRP A . n A 1 153 SER 153 133 133 SER SER A . n A 1 154 ALA 154 134 134 ALA ALA A . n A 1 155 ILE 155 135 135 ILE ILE A . n A 1 156 ARG 156 136 136 ARG ARG A . n A 1 157 GLU 157 137 137 GLU GLU A . n A 1 158 ARG 158 138 138 ARG ARG A . n A 1 159 THR 159 139 139 THR THR A . n A 1 160 LYS 160 140 140 LYS LYS A . n A 1 161 GLY 161 141 141 GLY GLY A . n A 1 162 PRO 162 142 142 PRO PRO A . n A 1 163 TYR 163 143 143 TYR TYR A . n A 1 164 GLU 164 144 144 GLU GLU A . n A 1 165 LEU 165 145 145 LEU LEU A . n A 1 166 THR 166 146 146 THR THR A . n A 1 167 LEU 167 147 147 LEU LEU A . n A 1 168 LYS 168 148 148 LYS LYS A . n A 1 169 GLU 169 149 149 GLU GLU A . n A 1 170 ASN 170 150 150 ASN ASN A . n A 1 171 GLY 171 151 151 GLY GLY A . n A 1 172 CYS 172 152 152 CYS CYS A . n A 1 173 ILE 173 153 153 ILE ILE A . n A 1 174 ILE 174 154 154 ILE ILE A . n A 1 175 PHE 175 155 155 PHE PHE A . n A 1 176 ILE 176 156 156 ILE ILE A . n A 1 177 SER 177 157 157 SER SER A . n A 1 178 GLY 178 158 158 GLY GLY A . n A 1 179 LEU 179 159 159 LEU LEU A . n A 1 180 GLU 180 160 160 GLU GLU A . n A 1 181 ASP 181 161 161 ASP ASP A . n A 1 182 GLY 182 162 162 GLY GLY A . n A 1 183 THR 183 163 163 THR THR A . n A 1 184 LEU 184 164 164 LEU LEU A . n A 1 185 LEU 185 165 165 LEU LEU A . n A 1 186 VAL 186 166 166 VAL VAL A . n A 1 187 CYS 187 167 167 CYS CYS A . n A 1 188 SER 188 168 168 SER SER A . n A 1 189 LYS 189 169 169 LYS LYS A . n A 1 190 HIS 190 170 170 HIS HIS A . n A 1 191 SER 191 171 171 SER SER A . n A 1 192 THR 192 172 172 THR THR A . n A 1 193 GLY 193 173 173 GLY GLY A . n A 1 194 ASP 194 174 174 ASP ASP A . n A 1 195 ARG 195 175 175 ARG ARG A . n A 1 196 SER 196 176 176 SER SER A . n A 1 197 ASP 197 177 177 ASP ASP A . n A 1 198 VAL 198 178 178 VAL VAL A . n A 1 199 ALA 199 179 179 ALA ALA A . n A 1 200 LEU 200 180 180 LEU LEU A . n A 1 201 SER 201 181 181 SER SER A . n A 1 202 HIS 202 182 182 HIS HIS A . n A 1 203 SER 203 183 183 SER SER A . n A 1 204 SER 204 184 184 SER SER A . n A 1 205 ALA 205 185 185 ALA ALA A . n A 1 206 GLY 206 186 186 GLY GLY A . n A 1 207 GLU 207 187 187 GLU GLU A . n A 1 208 LYS 208 188 188 LYS LYS A . n A 1 209 HIS 209 189 189 HIS HIS A . n A 1 210 LEU 210 190 190 LEU LEU A . n A 1 211 GLU 211 191 191 GLU GLU A . n A 1 212 ALA 212 192 192 ALA ALA A . n A 1 213 GLN 213 193 193 GLN GLN A . n A 1 214 LEU 214 194 194 LEU LEU A . n A 1 215 GLU 215 195 195 GLU GLU A . n A 1 216 ARG 216 196 196 ARG ARG A . n A 1 217 ILE 217 197 197 ILE ILE A . n A 1 218 GLY 218 198 198 GLY GLY A . n A 1 219 LYS 219 199 199 LYS LYS A . n A 1 220 THR 220 200 200 THR THR A . n A 1 221 LYS 221 201 201 LYS LYS A . n A 1 222 GLU 222 202 202 GLU GLU A . n A 1 223 GLU 223 203 203 GLU GLU A . n A 1 224 LEU 224 204 204 LEU LEU A . n A 1 225 ALA 225 205 205 ALA ALA A . n A 1 226 ARG 226 206 206 ARG ARG A . n A 1 227 GLU 227 207 207 GLU GLU A . n A 1 228 LEU 228 208 208 LEU LEU A . n A 1 229 ARG 229 209 209 ARG ARG A . n A 1 230 LYS 230 210 210 LYS LYS A . n A 1 231 ARG 231 211 211 ARG ARG A . n A 1 232 ASN 232 212 212 ASN ASN A . n A 1 233 ALA 233 213 213 ALA ALA A . n A 1 234 THR 234 214 214 THR THR A . n A 1 235 ALA 235 215 215 ALA ALA A . n A 1 236 VAL 236 216 216 VAL VAL A . n A 1 237 ALA 237 217 217 ALA ALA A . n A 1 238 GLU 238 218 218 GLU GLU A . n A 1 239 LEU 239 219 219 LEU LEU A . n A 1 240 CYS 240 220 220 CYS CYS A . n A 1 241 ASP 241 221 221 ASP ASP A . n A 1 242 ASP 242 222 222 ASP ASP A . n A 1 243 SER 243 223 223 SER SER A . n A 1 244 PHE 244 224 224 PHE PHE A . n A 1 245 GLU 245 225 225 GLU GLU A . n A 1 246 GLU 246 226 226 GLU GLU A . n A 1 247 HIS 247 227 227 HIS HIS A . n A 1 248 ILE 248 228 228 ILE ILE A . n A 1 249 LEU 249 229 229 LEU LEU A . n A 1 250 ALA 250 230 230 ALA ALA A . n A 1 251 TYR 251 231 231 TYR TYR A . n A 1 252 GLY 252 232 232 GLY GLY A . n A 1 253 PRO 253 233 233 PRO PRO A . n A 1 254 ASP 254 234 234 ASP ASP A . n A 1 255 LYS 255 235 235 LYS LYS A . n A 1 256 ALA 256 236 236 ALA ALA A . n A 1 257 GLY 257 237 237 GLY GLY A . n A 1 258 LEU 258 238 238 LEU LEU A . n A 1 259 TYR 259 239 239 TYR TYR A . n A 1 260 LEU 260 240 240 LEU LEU A . n A 1 261 HIS 261 241 241 HIS HIS A . n A 1 262 GLY 262 242 242 GLY GLY A . n A 1 263 ILE 263 243 243 ILE ILE A . n A 1 264 ASN 264 244 244 ASN ASN A . n A 1 265 LEU 265 245 245 LEU LEU A . n A 1 266 ASN 266 246 246 ASN ASN A . n A 1 267 ILE 267 247 247 ILE ILE A . n A 1 268 PRO 268 248 248 PRO PRO A . n A 1 269 GLU 269 249 249 GLU GLU A . n A 1 270 PHE 270 250 250 PHE PHE A . n A 1 271 ILE 271 251 251 ILE ILE A . n A 1 272 THR 272 252 252 THR THR A . n A 1 273 TYR 273 253 253 TYR TYR A . n A 1 274 PRO 274 254 254 PRO PRO A . n A 1 275 SER 275 255 255 SER SER A . n A 1 276 PRO 276 256 256 PRO PRO A . n A 1 277 LEU 277 257 257 LEU LEU A . n A 1 278 VAL 278 258 258 VAL VAL A . n A 1 279 GLN 279 259 259 GLN GLN A . n A 1 280 LYS 280 260 260 LYS LYS A . n A 1 281 PHE 281 261 261 PHE PHE A . n A 1 282 ALA 282 262 262 ALA ALA A . n A 1 283 GLU 283 263 263 GLU GLU A . n A 1 284 ASP 284 264 264 ASP ASP A . n A 1 285 TRP 285 265 265 TRP TRP A . n A 1 286 GLY 286 266 266 GLY GLY A . n A 1 287 PHE 287 267 267 PHE PHE A . n A 1 288 ARG 288 268 268 ARG ARG A . n A 1 289 LYS 289 269 269 LYS LYS A . n A 1 290 THR 290 270 270 THR THR A . n A 1 291 GLY 291 271 271 GLY GLY A . n A 1 292 LEU 292 272 272 LEU LEU A . n A 1 293 ILE 293 273 273 ILE ILE A . n A 1 294 ILE 294 274 274 ILE ILE A . n A 1 295 ILE 295 275 275 ILE ILE A . n A 1 296 ASP 296 276 276 ASP ASP A . n A 1 297 ASN 297 277 277 ASN ASN A . n A 1 298 ILE 298 278 278 ILE ILE A . n A 1 299 ASP 299 279 279 ASP ASP A . n A 1 300 ASP 300 280 280 ASP ASP A . n A 1 301 VAL 301 281 281 VAL VAL A . n A 1 302 LYS 302 282 282 LYS LYS A . n A 1 303 ALA 303 283 283 ALA ALA A . n A 1 304 PHE 304 284 284 PHE PHE A . n A 1 305 LEU 305 285 285 LEU LEU A . n A 1 306 GLU 306 286 286 GLU GLU A . n A 1 307 GLU 307 287 287 GLU GLU A . n A 1 308 VAL 308 288 288 VAL VAL A . n A 1 309 ALA 309 289 289 ALA ALA A . n A 1 310 GLU 310 290 290 GLU GLU A . n A 1 311 THR 311 291 291 THR THR A . n A 1 312 GLY 312 292 292 GLY GLY A . n A 1 313 ALA 313 293 293 ALA ALA A . n A 1 314 HIS 314 294 294 HIS HIS A . n A 1 315 ASP 315 295 295 ASP ASP A . n A 1 316 GLY 316 296 296 GLY GLY A . n A 1 317 ARG 317 297 297 ARG ARG A . n A 1 318 ASP 318 298 298 ASP ASP A . n A 1 319 VAL 319 299 299 VAL VAL A . n A 1 320 GLU 320 300 300 GLU GLU A . n A 1 321 GLY 321 301 301 GLY GLY A . n A 1 322 PHE 322 302 302 PHE PHE A . n A 1 323 VAL 323 303 303 VAL VAL A . n A 1 324 ILE 324 304 304 ILE ILE A . n A 1 325 ARG 325 305 305 ARG ARG A . n A 1 326 CYS 326 306 306 CYS CYS A . n A 1 327 LYS 327 307 307 LYS LYS A . n A 1 328 LYS 328 308 308 LYS LYS A . n A 1 329 SER 329 309 309 SER SER A . n A 1 330 THR 330 310 310 THR THR A . n A 1 331 ASN 331 311 311 ASN ASN A . n A 1 332 PRO 332 312 312 PRO PRO A . n A 1 333 GLY 333 313 313 GLY GLY A . n A 1 334 VAL 334 314 314 VAL VAL A . n A 1 335 GLY 335 315 315 GLY GLY A . n A 1 336 PRO 336 316 316 PRO PRO A . n A 1 337 TYR 337 317 317 TYR TYR A . n A 1 338 HIS 338 318 318 HIS HIS A . n A 1 339 ASP 339 319 319 ASP ASP A . n A 1 340 TRP 340 320 320 TRP TRP A . n A 1 341 PHE 341 321 321 PHE PHE A . n A 1 342 PHE 342 322 322 PHE PHE A . n A 1 343 LYS 343 323 323 LYS LYS A . n A 1 344 TYR 344 324 324 TYR TYR A . n A 1 345 LYS 345 325 325 LYS LYS A . n A 1 346 PHE 346 326 326 PHE PHE A . n A 1 347 GLU 347 327 327 GLU GLU A . n A 1 348 GLU 348 328 328 GLU GLU A . n A 1 349 PRO 349 329 329 PRO PRO A . n A 1 350 TYR 350 330 330 TYR TYR A . n A 1 351 LEU 351 331 331 LEU LEU A . n A 1 352 MET 352 332 332 MET MET A . n A 1 353 TYR 353 333 333 TYR TYR A . n A 1 354 ARG 354 334 334 ARG ARG A . n A 1 355 GLN 355 335 335 GLN GLN A . n A 1 356 TRP 356 336 336 TRP TRP A . n A 1 357 ARG 357 337 337 ARG ARG A . n A 1 358 GLU 358 338 338 GLU GLU A . n A 1 359 CYS 359 339 339 CYS CYS A . n A 1 360 THR 360 340 340 THR THR A . n A 1 361 LYS 361 341 341 LYS LYS A . n A 1 362 ALA 362 342 342 ALA ALA A . n A 1 363 LEU 363 343 343 LEU LEU A . n A 1 364 ILE 364 344 344 ILE ILE A . n A 1 365 SER 365 345 345 SER SER A . n A 1 366 GLY 366 346 346 GLY GLY A . n A 1 367 LYS 367 347 347 LYS LYS A . n A 1 368 GLN 368 348 348 GLN GLN A . n A 1 369 PRO 369 349 349 PRO PRO A . n A 1 370 LYS 370 350 350 LYS LYS A . n A 1 371 ILE 371 351 351 ILE ILE A . n A 1 372 LYS 372 352 352 LYS LYS A . n A 1 373 LYS 373 353 353 LYS LYS A . n A 1 374 HIS 374 354 354 HIS HIS A . n A 1 375 VAL 375 355 355 VAL VAL A . n A 1 376 LYS 376 356 356 LYS LYS A . n A 1 377 ILE 377 357 357 ILE ILE A . n A 1 378 THR 378 358 358 THR THR A . n A 1 379 GLU 379 359 359 GLU GLU A . n A 1 380 GLU 380 360 360 GLU GLU A . n A 1 381 TYR 381 361 361 TYR TYR A . n A 1 382 LEU 382 362 362 LEU LEU A . n A 1 383 LEU 383 363 363 LEU LEU A . n A 1 384 TYR 384 364 364 TYR TYR A . n A 1 385 ALA 385 365 365 ALA ALA A . n A 1 386 ARG 386 366 366 ARG ARG A . n A 1 387 LYS 387 367 367 LYS LYS A . n A 1 388 ARG 388 368 368 ARG ARG A . n A 1 389 LEU 389 369 369 LEU LEU A . n A 1 390 ALA 390 370 370 ALA ALA A . n A 1 391 ALA 391 371 371 ALA ALA A . n A 1 392 ASP 392 372 372 ASP ASP A . n A 1 393 PRO 393 373 373 PRO PRO A . n A 1 394 LYS 394 374 374 LYS LYS A . n A 1 395 LEU 395 375 375 LEU LEU A . n A 1 396 ALA 396 376 376 ALA ALA A . n A 1 397 LYS 397 377 377 LYS LYS A . n A 1 398 LEU 398 378 378 LEU LEU A . n A 1 399 TYR 399 379 379 TYR TYR A . n A 1 400 ASN 400 380 380 ASN ASN A . n A 1 401 GLN 401 381 381 GLN GLN A . n A 1 402 ASN 402 382 382 ASN ASN A . n A 1 403 HIS 403 383 383 HIS HIS A . n A 1 404 GLY 404 384 384 GLY GLY A . n A 1 405 ILE 405 385 385 ILE ILE A . n A 1 406 ILE 406 386 386 ILE ILE A . n A 1 407 LYS 407 387 387 LYS LYS A . n A 1 408 LEU 408 388 388 LEU LEU A . n A 1 409 ARG 409 389 389 ARG ARG A . n A 1 410 ASN 410 390 390 ASN ASN A . n A 1 411 ASP 411 391 391 ASP ASP A . n A 1 412 PHE 412 392 392 PHE PHE A . n A 1 413 LEU 413 393 393 LEU LEU A . n A 1 414 GLU 414 394 394 GLU GLU A . n A 1 415 TYR 415 395 395 TYR TYR A . n A 1 416 LYS 416 396 396 LYS LYS A . n A 1 417 ASN 417 397 397 ASN ASN A . n A 1 418 MET 418 398 398 MET MET A . n A 1 419 LYS 419 399 399 LYS LYS A . n A 1 420 GLY 420 400 400 GLY GLY A . n A 1 421 THR 421 401 401 THR THR A . n A 1 422 ASP 422 402 402 ASP ASP A . n A 1 423 ALA 423 403 403 ALA ALA A . n A 1 424 ALA 424 404 404 ALA ALA A . n A 1 425 ASN 425 405 405 ASN ASN A . n A 1 426 LEU 426 406 406 LEU LEU A . n A 1 427 GLU 427 407 407 GLU GLU A . n A 1 428 ASP 428 408 ? ? ? A . n A 1 429 ASP 429 409 ? ? ? A . n A 1 430 GLY 430 410 ? ? ? A . n A 1 431 ALA 431 411 ? ? ? A . n A 1 432 ALA 432 412 ? ? ? A . n A 1 433 SER 433 413 ? ? ? A . n A 1 434 VAL 434 414 ? ? ? A . n B 2 1 A 1 2 2 A A C . n B 2 2 U 2 3 3 U U C . n B 2 3 C 3 4 4 C C C . n B 2 4 U 4 5 5 U U C . n B 2 5 G 5 6 6 G G C . n B 2 6 G 6 7 7 G G C . n B 2 7 A 7 8 8 A A C . n C 2 1 A 1 2 2 A A B . n C 2 2 U 2 3 3 U U B . n C 2 3 C 3 4 4 C C B . n C 2 4 U 4 5 5 U U B . n C 2 5 G 5 6 6 G G B . n C 2 6 G 6 7 7 G G B . n C 2 7 A 7 8 8 A A B . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id AMP _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id AMP _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 AMP 1 101 1 AMP AMP B . E 4 HOH 1 501 56 HOH HOH A . E 4 HOH 2 502 76 HOH HOH A . E 4 HOH 3 503 26 HOH HOH A . E 4 HOH 4 504 52 HOH HOH A . E 4 HOH 5 505 64 HOH HOH A . E 4 HOH 6 506 51 HOH HOH A . E 4 HOH 7 507 46 HOH HOH A . E 4 HOH 8 508 83 HOH HOH A . E 4 HOH 9 509 48 HOH HOH A . E 4 HOH 10 510 21 HOH HOH A . E 4 HOH 11 511 86 HOH HOH A . E 4 HOH 12 512 58 HOH HOH A . E 4 HOH 13 513 62 HOH HOH A . E 4 HOH 14 514 16 HOH HOH A . E 4 HOH 15 515 59 HOH HOH A . E 4 HOH 16 516 17 HOH HOH A . E 4 HOH 17 517 32 HOH HOH A . E 4 HOH 18 518 63 HOH HOH A . E 4 HOH 19 519 18 HOH HOH A . E 4 HOH 20 520 61 HOH HOH A . E 4 HOH 21 521 128 HOH HOH A . E 4 HOH 22 522 84 HOH HOH A . E 4 HOH 23 523 43 HOH HOH A . E 4 HOH 24 524 5 HOH HOH A . E 4 HOH 25 525 15 HOH HOH A . E 4 HOH 26 526 50 HOH HOH A . E 4 HOH 27 527 40 HOH HOH A . E 4 HOH 28 528 54 HOH HOH A . E 4 HOH 29 529 47 HOH HOH A . E 4 HOH 30 530 42 HOH HOH A . E 4 HOH 31 531 74 HOH HOH A . E 4 HOH 32 532 7 HOH HOH A . E 4 HOH 33 533 106 HOH HOH A . E 4 HOH 34 534 12 HOH HOH A . E 4 HOH 35 535 36 HOH HOH A . E 4 HOH 36 536 3 HOH HOH A . E 4 HOH 37 537 2 HOH HOH A . E 4 HOH 38 538 1 HOH HOH A . E 4 HOH 39 539 31 HOH HOH A . E 4 HOH 40 540 19 HOH HOH A . E 4 HOH 41 541 90 HOH HOH A . E 4 HOH 42 542 22 HOH HOH A . E 4 HOH 43 543 85 HOH HOH A . E 4 HOH 44 544 14 HOH HOH A . E 4 HOH 45 545 75 HOH HOH A . E 4 HOH 46 546 53 HOH HOH A . E 4 HOH 47 547 114 HOH HOH A . E 4 HOH 48 548 33 HOH HOH A . E 4 HOH 49 549 93 HOH HOH A . E 4 HOH 50 550 39 HOH HOH A . E 4 HOH 51 551 13 HOH HOH A . E 4 HOH 52 552 49 HOH HOH A . E 4 HOH 53 553 100 HOH HOH A . E 4 HOH 54 554 38 HOH HOH A . E 4 HOH 55 555 55 HOH HOH A . E 4 HOH 56 556 6 HOH HOH A . E 4 HOH 57 557 72 HOH HOH A . E 4 HOH 58 558 29 HOH HOH A . E 4 HOH 59 559 8 HOH HOH A . E 4 HOH 60 560 102 HOH HOH A . E 4 HOH 61 561 65 HOH HOH A . E 4 HOH 62 562 66 HOH HOH A . E 4 HOH 63 563 28 HOH HOH A . E 4 HOH 64 564 121 HOH HOH A . E 4 HOH 65 565 20 HOH HOH A . E 4 HOH 66 566 34 HOH HOH A . E 4 HOH 67 567 24 HOH HOH A . E 4 HOH 68 568 27 HOH HOH A . E 4 HOH 69 569 4 HOH HOH A . E 4 HOH 70 570 35 HOH HOH A . E 4 HOH 71 571 23 HOH HOH A . E 4 HOH 72 572 118 HOH HOH A . E 4 HOH 73 573 110 HOH HOH A . E 4 HOH 74 574 104 HOH HOH A . E 4 HOH 75 575 44 HOH HOH A . E 4 HOH 76 576 25 HOH HOH A . E 4 HOH 77 577 67 HOH HOH A . E 4 HOH 78 578 30 HOH HOH A . E 4 HOH 79 579 130 HOH HOH A . E 4 HOH 80 580 92 HOH HOH A . E 4 HOH 81 581 119 HOH HOH A . E 4 HOH 82 582 120 HOH HOH A . E 4 HOH 83 583 45 HOH HOH A . E 4 HOH 84 584 116 HOH HOH A . E 4 HOH 85 585 10 HOH HOH A . E 4 HOH 86 586 105 HOH HOH A . E 4 HOH 87 587 101 HOH HOH A . E 4 HOH 88 588 88 HOH HOH A . E 4 HOH 89 589 68 HOH HOH A . E 4 HOH 90 590 81 HOH HOH A . E 4 HOH 91 591 99 HOH HOH A . E 4 HOH 92 592 124 HOH HOH A . E 4 HOH 93 593 73 HOH HOH A . E 4 HOH 94 594 41 HOH HOH A . E 4 HOH 95 595 87 HOH HOH A . E 4 HOH 96 596 71 HOH HOH A . E 4 HOH 97 597 70 HOH HOH A . E 4 HOH 98 598 69 HOH HOH A . E 4 HOH 99 599 80 HOH HOH A . E 4 HOH 100 600 79 HOH HOH A . F 4 HOH 1 101 108 HOH HOH C . F 4 HOH 2 102 9 HOH HOH C . F 4 HOH 3 103 91 HOH HOH C . F 4 HOH 4 104 129 HOH HOH C . F 4 HOH 5 105 98 HOH HOH C . F 4 HOH 6 106 60 HOH HOH C . G 4 HOH 1 201 57 HOH HOH B . G 4 HOH 2 202 11 HOH HOH B . G 4 HOH 3 203 37 HOH HOH B . G 4 HOH 4 204 115 HOH HOH B . G 4 HOH 5 205 117 HOH HOH B . G 4 HOH 6 206 77 HOH HOH B . G 4 HOH 7 207 131 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 20200131 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.7.12 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.8.3 3 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8RBJ _cell.details ? _cell.formula_units_Z ? _cell.length_a 51.560 _cell.length_a_esd ? _cell.length_b 75.360 _cell.length_b_esd ? _cell.length_c 124.560 _cell.length_c_esd ? _cell.volume 483985.553 _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8RBJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8RBJ _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.27 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 45.80 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;protein concentration: 5.8 mg/ml protein:RNA ratio = 1:1.7 precipitant solution: 20 % PEG3350, 0.2 M potassium formate ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 291.15 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 2M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-10-12 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si (111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8731 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID23-2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.8731 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID23-2 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate 45.35 _reflns.entry_id 8RBJ _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.37 _reflns.d_resolution_low 47.64 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 20384 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 15.8 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 7.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.090 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.989 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.355 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.37 _reflns_shell.d_res_low 2.46 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.0 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2019 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.856 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.392 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 3.123 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 60.29 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8RBJ _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.37 _refine.ls_d_res_low 47.64 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 20373 _refine.ls_number_reflns_R_free 1003 _refine.ls_number_reflns_R_work 19370 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.95 _refine.ls_percent_reflns_R_free 4.92 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1803 _refine.ls_R_factor_R_free 0.2178 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1782 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 22.2559 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3410 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.37 _refine_hist.d_res_low 47.64 _refine_hist.number_atoms_solvent 113 _refine_hist.number_atoms_total 3575 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 3138 _refine_hist.pdbx_number_atoms_nucleic_acid 301 _refine_hist.pdbx_number_atoms_ligand 23 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0067 ? 3569 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.9389 ? 4890 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0511 ? 536 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0084 ? 575 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 14.3126 ? 1370 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.37 2.50 . . 139 2718 99.90 . . . . 0.2857 . . . . . . . . . . . 0.3363 'X-RAY DIFFRACTION' 2.50 2.65 . . 116 2736 100.00 . . . . 0.2418 . . . . . . . . . . . 0.2681 'X-RAY DIFFRACTION' 2.65 2.86 . . 157 2722 99.97 . . . . 0.2335 . . . . . . . . . . . 0.2849 'X-RAY DIFFRACTION' 2.86 3.14 . . 124 2751 99.97 . . . . 0.2022 . . . . . . . . . . . 0.2336 'X-RAY DIFFRACTION' 3.14 3.60 . . 162 2735 100.00 . . . . 0.1733 . . . . . . . . . . . 0.2240 'X-RAY DIFFRACTION' 3.60 4.53 . . 147 2790 100.00 . . . . 0.1499 . . . . . . . . . . . 0.1815 'X-RAY DIFFRACTION' 4.53 47.64 . . 158 2918 99.81 . . . . 0.1505 . . . . . . . . . . . 0.1954 # _struct.entry_id 8RBJ _struct.title 'Structure of fungal tRNA ligase in complex with RNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8RBJ _struct_keywords.text 'tRNA ligase, RNA duplex, RNA processing, tRNA splicing, LIGASE' _struct_keywords.pdbx_keywords LIGASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP G0S6G2_CHATD G0S6G2 ? 1 ;MDGTAEKQRDSLASRYKASTDYAKDAEGLTAPYVSQDPQETAALVRALDDAAKKGKKSGGFSVKKTRYAVASSPTGAEVD SWRFNDWDYKKPDLPTYARGLFTTRTQHGVPEIAVRGYDKFFNIDETRDTAWSAIRERTKGPYELTLKENGCIIFISGLE DGTLLVCSKHSTGDRSDVALSHSSAGEKHLEAQLERIGKTKEELARELRKRNATAVAELCDDSFEEHILAYGPDKAGLYL HGINLNIPEFITYPSPLVQKFAEDWGFRKTGLIIIDNIDDVKAFLEEVAETGAHDGRDVEGFVIRCKKSTNPGVGPYHDW FFKYKFEEPYLMYRQWRECTKALISGKQPKIKKHVKITEEYLLYARKRLAADPKLAKLYNQNHGIIKLRNDFLEYKNMKG TDAANLEDDGAASV ; 1 2 PDB 8RBJ 8RBJ ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8RBJ A 21 ? 434 ? G0S6G2 1 ? 414 ? 1 414 2 2 8RBJ C 1 ? 7 ? 8RBJ 2 ? 8 ? 2 8 3 2 8RBJ B 1 ? 7 ? 8RBJ 2 ? 8 ? 2 8 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8RBJ MET A 1 ? UNP G0S6G2 ? ? 'initiating methionine' -19 1 1 8RBJ GLY A 2 ? UNP G0S6G2 ? ? 'expression tag' -18 2 1 8RBJ SER A 3 ? UNP G0S6G2 ? ? 'expression tag' -17 3 1 8RBJ SER A 4 ? UNP G0S6G2 ? ? 'expression tag' -16 4 1 8RBJ HIS A 5 ? UNP G0S6G2 ? ? 'expression tag' -15 5 1 8RBJ HIS A 6 ? UNP G0S6G2 ? ? 'expression tag' -14 6 1 8RBJ HIS A 7 ? UNP G0S6G2 ? ? 'expression tag' -13 7 1 8RBJ HIS A 8 ? UNP G0S6G2 ? ? 'expression tag' -12 8 1 8RBJ HIS A 9 ? UNP G0S6G2 ? ? 'expression tag' -11 9 1 8RBJ HIS A 10 ? UNP G0S6G2 ? ? 'expression tag' -10 10 1 8RBJ SER A 11 ? UNP G0S6G2 ? ? 'expression tag' -9 11 1 8RBJ SER A 12 ? UNP G0S6G2 ? ? 'expression tag' -8 12 1 8RBJ GLY A 13 ? UNP G0S6G2 ? ? 'expression tag' -7 13 1 8RBJ LEU A 14 ? UNP G0S6G2 ? ? 'expression tag' -6 14 1 8RBJ VAL A 15 ? UNP G0S6G2 ? ? 'expression tag' -5 15 1 8RBJ PRO A 16 ? UNP G0S6G2 ? ? 'expression tag' -4 16 1 8RBJ ARG A 17 ? UNP G0S6G2 ? ? 'expression tag' -3 17 1 8RBJ GLY A 18 ? UNP G0S6G2 ? ? 'expression tag' -2 18 1 8RBJ SER A 19 ? UNP G0S6G2 ? ? 'expression tag' -1 19 1 8RBJ HIS A 20 ? UNP G0S6G2 ? ? 'expression tag' 0 20 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2180 ? 1 MORE -4 ? 1 'SSA (A^2)' 21390 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'native gel electrophoresis' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 31 ? TYR A 36 ? SER A 11 TYR A 16 1 ? 6 HELX_P HELX_P2 AA2 TYR A 42 ? GLU A 47 ? TYR A 22 GLU A 27 5 ? 6 HELX_P HELX_P3 AA3 ASP A 57 ? LYS A 74 ? ASP A 37 LYS A 54 1 ? 18 HELX_P HELX_P4 AA4 TRP A 107 ? LYS A 111 ? TRP A 87 LYS A 91 5 ? 5 HELX_P HELX_P5 AA5 THR A 147 ? THR A 150 ? THR A 127 THR A 130 5 ? 4 HELX_P HELX_P6 AA6 ALA A 151 ? ARG A 158 ? ALA A 131 ARG A 138 1 ? 8 HELX_P HELX_P7 AA7 SER A 201 ? ILE A 217 ? SER A 181 ILE A 197 1 ? 17 HELX_P HELX_P8 AA8 THR A 220 ? ASN A 232 ? THR A 200 ASN A 212 1 ? 13 HELX_P HELX_P9 AA9 PRO A 274 ? GLY A 286 ? PRO A 254 GLY A 266 1 ? 13 HELX_P HELX_P10 AB1 ASN A 297 ? GLY A 312 ? ASN A 277 GLY A 292 1 ? 16 HELX_P HELX_P11 AB2 PRO A 349 ? SER A 365 ? PRO A 329 SER A 345 1 ? 17 HELX_P HELX_P12 AB3 HIS A 374 ? ASP A 392 ? HIS A 354 ASP A 372 1 ? 19 HELX_P HELX_P13 AB4 PRO A 393 ? GLN A 401 ? PRO A 373 GLN A 381 1 ? 9 HELX_P HELX_P14 AB5 GLY A 404 ? LYS A 416 ? GLY A 384 LYS A 396 1 ? 13 HELX_P HELX_P15 AB6 LYS A 419 ? ASN A 425 ? LYS A 399 ASN A 405 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C A 1 P ? ? ? 1_555 D AMP . O3P ? ? B A 2 B AMP 101 1_555 ? ? ? ? ? ? ? 1.520 ? ? hydrog1 hydrog ? ? B U 2 N3 ? ? ? 1_555 C A 7 N1 ? ? C U 3 B A 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B U 2 O4 ? ? ? 1_555 C A 7 N6 ? ? C U 3 B A 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B C 3 N3 ? ? ? 1_555 C G 6 N1 ? ? C C 4 B G 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B C 3 N4 ? ? ? 1_555 C G 6 O6 ? ? C C 4 B G 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B C 3 O2 ? ? ? 1_555 C G 6 N2 ? ? C C 4 B G 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B U 4 N3 ? ? ? 1_555 C G 5 O6 ? ? C U 5 B G 6 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog7 hydrog ? ? B U 4 O2 ? ? ? 1_555 C G 5 N1 ? ? C U 5 B G 6 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog8 hydrog ? ? B G 5 N1 ? ? ? 1_555 C U 4 O2 ? ? C G 6 B U 5 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog9 hydrog ? ? B G 5 O6 ? ? ? 1_555 C U 4 N3 ? ? C G 6 B U 5 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog10 hydrog ? ? B G 6 N1 ? ? ? 1_555 C C 3 N3 ? ? C G 7 B C 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B G 6 N2 ? ? ? 1_555 C C 3 O2 ? ? C G 7 B C 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B G 6 O6 ? ? ? 1_555 C C 3 N4 ? ? C G 7 B C 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 161 A . ? GLY 141 A PRO 162 A ? PRO 142 A 1 -1.44 2 GLU 348 A . ? GLU 328 A PRO 349 A ? PRO 329 A 1 -0.81 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? AA3 ? 5 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 83 ? ALA A 89 ? VAL A 63 ALA A 69 AA1 2 GLU A 98 ? PHE A 104 ? GLU A 78 PHE A 84 AA1 3 LEU A 121 ? ARG A 125 ? LEU A 101 ARG A 105 AA1 4 PRO A 131 ? ARG A 136 ? PRO A 111 ARG A 116 AA2 1 LEU A 292 ? ILE A 295 ? LEU A 272 ILE A 275 AA2 2 THR A 159 ? LEU A 167 ? THR A 139 LEU A 147 AA2 3 GLY A 321 ? LYS A 328 ? GLY A 301 LYS A 308 AA2 4 HIS A 338 ? LYS A 345 ? HIS A 318 LYS A 325 AA3 1 LEU A 184 ? CYS A 187 ? LEU A 164 CYS A 167 AA3 2 CYS A 172 ? GLY A 178 ? CYS A 152 GLY A 158 AA3 3 ALA A 233 ? CYS A 240 ? ALA A 213 CYS A 220 AA3 4 GLY A 257 ? LEU A 265 ? GLY A 237 LEU A 245 AA3 5 ARG A 288 ? LYS A 289 ? ARG A 268 LYS A 269 AA4 1 ALA A 313 ? HIS A 314 ? ALA A 293 HIS A 294 AA4 2 ARG A 317 ? ASP A 318 ? ARG A 297 ASP A 298 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 86 ? N THR A 66 O SER A 101 ? O SER A 81 AA1 2 3 N ASP A 100 ? N ASP A 80 O THR A 123 ? O THR A 103 AA1 3 4 N THR A 124 ? N THR A 104 O GLU A 132 ? O GLU A 112 AA2 1 2 O ILE A 293 ? O ILE A 273 N LEU A 165 ? N LEU A 145 AA2 2 3 N GLU A 164 ? N GLU A 144 O ARG A 325 ? O ARG A 305 AA2 3 4 N ILE A 324 ? N ILE A 304 O PHE A 342 ? O PHE A 322 AA3 1 2 O LEU A 185 ? O LEU A 165 N SER A 177 ? N SER A 157 AA3 2 3 N ILE A 174 ? N ILE A 154 O ALA A 237 ? O ALA A 217 AA3 3 4 N VAL A 236 ? N VAL A 216 O GLY A 262 ? O GLY A 242 AA3 4 5 N LEU A 260 ? N LEU A 240 O ARG A 288 ? O ARG A 268 AA4 1 2 N HIS A 314 ? N HIS A 294 O ARG A 317 ? O ARG A 297 # _pdbx_entry_details.entry_id 8RBJ _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification N # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 C _pdbx_validate_rmsd_bond.auth_comp_id_1 A _pdbx_validate_rmsd_bond.auth_seq_id_1 2 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 C _pdbx_validate_rmsd_bond.auth_comp_id_2 A _pdbx_validate_rmsd_bond.auth_seq_id_2 2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.494 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.113 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 221 ? ? -166.10 106.52 2 1 HIS A 227 ? ? -116.45 -110.40 3 1 CYS A 306 ? ? -154.76 -156.29 4 1 THR A 310 ? ? -66.52 -100.57 5 1 ASN A 382 ? ? 73.29 30.82 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x+1/2,-y+1/2,-z 3 -x,y+1/2,-z+1/2 4 -x+1/2,-y,z+1/2 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -20.696 1.692 27.718 0.593208027377 0.672971726717 0.606780977242 0.177072007666 0.113414547496 -0.0704121215032 3.94500007189 4.14046743435 3.297179228 -0.875083061587 1.60004242507 0.249622382154 -0.451042754387 0.2783975401 0.166740464966 -0.679555416272 0.689227804406 0.54362712012 0.547165296338 -1.03230293722 -0.860338563404 'X-RAY DIFFRACTION' 2 ? refined -2.498 -24.467 20.522 0.544971533222 0.269044301983 0.595918475209 0.0705997361441 -0.160730021208 -0.0303987137578 4.64858272263 4.29931011409 5.54140826189 0.545632053715 -0.73431278601 0.157591638518 0.226422855955 0.0476947440861 -0.267088453576 0.0817930363052 -1.08363854947 -0.548055643606 -0.122696618272 1.1134938539 -0.0414517483974 'X-RAY DIFFRACTION' 3 ? refined -12.258 -21.679 14.530 0.521300778886 0.369968704278 0.583111570007 -0.147147770092 -0.171843954969 -0.00333327631139 3.87539054963 2.8243223133 3.87835230222 1.39294310975 1.33309946747 0.431584362843 0.461686700514 0.0437059017739 -0.500800522471 0.0872306056729 -1.11005597179 0.251421179567 -0.552870663269 1.1456316627 -0.342430723023 'X-RAY DIFFRACTION' 4 ? refined -11.765 -11.255 18.169 0.256363418144 0.288192271308 0.230527194515 -0.0336954903809 -0.0138382739852 -0.00892631629217 4.22475887231 3.37571508857 4.6547891733 -0.14756999212 0.731466406054 -0.875701885041 -0.0274936203531 0.242049887757 -0.169872495875 0.0757409944383 -0.171962249194 0.114132428339 -0.105662984221 0.301377468127 -0.704354918663 'X-RAY DIFFRACTION' 5 ? refined 1.195 0.101 24.851 0.410332990143 0.290358250347 0.417965873756 0.0119875318704 -0.085815456496 -0.0464424085001 2.23952331498 4.95988100385 2.53028834674 0.470652673137 0.764496336267 -0.439540460048 -0.148001822497 -0.0655738763461 0.208713071802 -0.0993062034218 0.252333882966 -0.649581617035 0.446847205246 -0.741082462293 0.317157080515 'X-RAY DIFFRACTION' 6 ? refined -11.951 -0.122 19.813 0.33098870548 0.271575155841 0.289584980171 0.081667676921 -0.0192346340931 -0.0193395098695 3.73365553718 2.15837827503 5.42467856217 -0.691417658886 0.840405509366 -0.00649490046842 -0.155862246805 0.0774638400344 0.0354188304613 0.0361251020169 0.415251318705 0.133886507674 0.131728586261 -0.81026699292 -0.537919042229 'X-RAY DIFFRACTION' 7 ? refined -28.531 4.236 9.575 0.70082658806 1.03048662749 0.667644390759 0.360727674767 -0.124460167763 0.121808245792 5.17121220138 3.7707328319 3.80194765972 2.50134917069 -0.667216830925 -0.132329470671 0.156035981506 -0.0362957166285 0.00622899018998 0.423735779251 0.764390474058 0.750795283372 -0.162399759189 -1.27213785085 -1.3440010321 'X-RAY DIFFRACTION' 8 ? refined -26.347 -9.276 17.180 0.295289182607 0.850682735372 0.528175367674 -0.012236514462 -0.0360067029513 0.0968464363008 5.18374206326 3.99477465521 4.51862764906 0.294744851519 -1.90493450346 0.614030703532 -0.0851056145388 0.172356417191 0.011598238857 -0.0992792164186 -0.614022994363 0.845963691617 -0.0109877982607 0.27913178828 -1.66304341354 'X-RAY DIFFRACTION' 9 ? refined -13.704 -0.546 -10.897 0.781438287775 0.880046151965 0.466043180738 0.116596076079 -0.00273466333748 0.0830842444312 6.68468226671 1.68431242848 3.95363055007 -1.27651566968 -3.17768463893 0.767346121296 -0.112634001763 -0.0262547489716 -0.0533120476265 0.371643187572 -0.711717304157 0.0415715530306 -0.220178580358 0.0948735339763 0.195246522935 'X-RAY DIFFRACTION' 10 ? refined -7.027 7.784 -12.460 1.16824345012 1.12710567303 0.561906920609 0.00950122523287 0.0253598715078 0.295792217508 3.19320955436 2.84468197899 4.14278927845 0.330715961312 -0.984343438583 0.156661158083 0.263286298448 -0.352453306837 0.109770927712 0.755253577022 0.364869147083 -0.365875202179 -0.709081165541 -0.450799033256 0.896197100164 'X-RAY DIFFRACTION' 11 ? refined -18.161 11.544 -6.564 1.05351695856 0.76629849045 0.707363067867 0.196448068242 -0.0287661444405 0.258327996291 7.73930518819 2.55664954081 2.95781812904 -1.32466630096 0.777425446343 -0.666068712908 -0.722902680559 0.60887118641 0.225219708634 -0.0689282484284 0.623355066659 0.221319368391 0.211408160058 -1.11002401354 -0.483782189011 'X-RAY DIFFRACTION' 12 ? refined -23.089 -18.833 -0.101 0.593725268512 0.618692253117 0.523423236708 0.00896403296848 -0.195905352906 -0.0904036850484 1.78686793903 4.27525402004 8.90033273767 5.00138017281 4.75214014651 9.10518941933 -0.52502973482 0.37915974236 0.0425917678708 -0.137457217882 0.334414431783 0.0851086566174 -0.589746756185 -0.888657867947 0.449814155178 'X-RAY DIFFRACTION' 13 ? refined -29.503 -26.059 2.674 0.933858986742 1.1760386508 0.515235782827 0.0616638237525 -0.267674893585 -0.276625198504 8.56353492125 4.7110864513 3.24178650328 3.21227602273 0.56577941872 -1.0106297117 -0.94992984471 0.576735872269 0.0929317487301 -1.01195570723 -0.163553017186 -0.152655540144 2.48833864355 -0.515461167776 -0.43457598561 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 12 A 37 '( CHAIN A AND RESID 12:37 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 38 A 77 '( CHAIN A AND RESID 38:77 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 78 A 100 '( CHAIN A AND RESID 78:100 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 101 A 181 '( CHAIN A AND RESID 101:181 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 182 A 210 '( CHAIN A AND RESID 182:210 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 6 6 A 211 A 277 '( CHAIN A AND RESID 211:277 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 7 7 A 278 A 300 '( CHAIN A AND RESID 278:300 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 8 8 A 301 A 329 '( CHAIN A AND RESID 301:329 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 9 9 A 330 A 354 '( CHAIN A AND RESID 330:354 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 10 10 A 355 A 384 '( CHAIN A AND RESID 355:384 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 11 11 A 385 A 407 '( CHAIN A AND RESID 385:407 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 12 12 B 2 B 8 '( CHAIN B AND RESID 2:8 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 13 13 C 2 C 8 '( CHAIN C AND RESID 2:8 )' ? ? ? ? ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -19 ? A MET 1 2 1 Y 1 A GLY -18 ? A GLY 2 3 1 Y 1 A SER -17 ? A SER 3 4 1 Y 1 A SER -16 ? A SER 4 5 1 Y 1 A HIS -15 ? A HIS 5 6 1 Y 1 A HIS -14 ? A HIS 6 7 1 Y 1 A HIS -13 ? A HIS 7 8 1 Y 1 A HIS -12 ? A HIS 8 9 1 Y 1 A HIS -11 ? A HIS 9 10 1 Y 1 A HIS -10 ? A HIS 10 11 1 Y 1 A SER -9 ? A SER 11 12 1 Y 1 A SER -8 ? A SER 12 13 1 Y 1 A GLY -7 ? A GLY 13 14 1 Y 1 A LEU -6 ? A LEU 14 15 1 Y 1 A VAL -5 ? A VAL 15 16 1 Y 1 A PRO -4 ? A PRO 16 17 1 Y 1 A ARG -3 ? A ARG 17 18 1 Y 1 A GLY -2 ? A GLY 18 19 1 Y 1 A SER -1 ? A SER 19 20 1 Y 1 A HIS 0 ? A HIS 20 21 1 Y 1 A MET 1 ? A MET 21 22 1 Y 1 A ASP 2 ? A ASP 22 23 1 Y 1 A GLY 3 ? A GLY 23 24 1 Y 1 A THR 4 ? A THR 24 25 1 Y 1 A ALA 5 ? A ALA 25 26 1 Y 1 A GLU 6 ? A GLU 26 27 1 Y 1 A LYS 7 ? A LYS 27 28 1 Y 1 A GLN 8 ? A GLN 28 29 1 Y 1 A ARG 9 ? A ARG 29 30 1 Y 1 A ASP 10 ? A ASP 30 31 1 Y 1 A LYS 56 ? A LYS 76 32 1 Y 1 A LYS 57 ? A LYS 77 33 1 Y 1 A SER 58 ? A SER 78 34 1 Y 1 A GLY 59 ? A GLY 79 35 1 Y 1 A GLY 60 ? A GLY 80 36 1 Y 1 A ASP 408 ? A ASP 428 37 1 Y 1 A ASP 409 ? A ASP 429 38 1 Y 1 A GLY 410 ? A GLY 430 39 1 Y 1 A ALA 411 ? A ALA 431 40 1 Y 1 A ALA 412 ? A ALA 432 41 1 Y 1 A SER 413 ? A SER 433 42 1 Y 1 A VAL 414 ? A VAL 434 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 AMP P P N N 51 AMP O1P O N N 52 AMP O2P O N N 53 AMP O3P O N N 54 AMP "O5'" O N N 55 AMP "C5'" C N N 56 AMP "C4'" C N R 57 AMP "O4'" O N N 58 AMP "C3'" C N S 59 AMP "O3'" O N N 60 AMP "C2'" C N R 61 AMP "O2'" O N N 62 AMP "C1'" C N R 63 AMP N9 N Y N 64 AMP C8 C Y N 65 AMP N7 N Y N 66 AMP C5 C Y N 67 AMP C6 C Y N 68 AMP N6 N N N 69 AMP N1 N Y N 70 AMP C2 C Y N 71 AMP N3 N Y N 72 AMP C4 C Y N 73 AMP HOP2 H N N 74 AMP HOP3 H N N 75 AMP "H5'1" H N N 76 AMP "H5'2" H N N 77 AMP "H4'" H N N 78 AMP "H3'" H N N 79 AMP "HO3'" H N N 80 AMP "H2'" H N N 81 AMP "HO2'" H N N 82 AMP "H1'" H N N 83 AMP H8 H N N 84 AMP HN61 H N N 85 AMP HN62 H N N 86 AMP H2 H N N 87 ARG N N N N 88 ARG CA C N S 89 ARG C C N N 90 ARG O O N N 91 ARG CB C N N 92 ARG CG C N N 93 ARG CD C N N 94 ARG NE N N N 95 ARG CZ C N N 96 ARG NH1 N N N 97 ARG NH2 N N N 98 ARG OXT O N N 99 ARG H H N N 100 ARG H2 H N N 101 ARG HA H N N 102 ARG HB2 H N N 103 ARG HB3 H N N 104 ARG HG2 H N N 105 ARG HG3 H N N 106 ARG HD2 H N N 107 ARG HD3 H N N 108 ARG HE H N N 109 ARG HH11 H N N 110 ARG HH12 H N N 111 ARG HH21 H N N 112 ARG HH22 H N N 113 ARG HXT H N N 114 ASN N N N N 115 ASN CA C N S 116 ASN C C N N 117 ASN O O N N 118 ASN CB C N N 119 ASN CG C N N 120 ASN OD1 O N N 121 ASN ND2 N N N 122 ASN OXT O N N 123 ASN H H N N 124 ASN H2 H N N 125 ASN HA H N N 126 ASN HB2 H N N 127 ASN HB3 H N N 128 ASN HD21 H N N 129 ASN HD22 H N N 130 ASN HXT H N N 131 ASP N N N N 132 ASP CA C N S 133 ASP C C N N 134 ASP O O N N 135 ASP CB C N N 136 ASP CG C N N 137 ASP OD1 O N N 138 ASP OD2 O N N 139 ASP OXT O N N 140 ASP H H N N 141 ASP H2 H N N 142 ASP HA H N N 143 ASP HB2 H N N 144 ASP HB3 H N N 145 ASP HD2 H N N 146 ASP HXT H N N 147 C OP3 O N N 148 C P P N N 149 C OP1 O N N 150 C OP2 O N N 151 C "O5'" O N N 152 C "C5'" C N N 153 C "C4'" C N R 154 C "O4'" O N N 155 C "C3'" C N S 156 C "O3'" O N N 157 C "C2'" C N R 158 C "O2'" O N N 159 C "C1'" C N R 160 C N1 N N N 161 C C2 C N N 162 C O2 O N N 163 C N3 N N N 164 C C4 C N N 165 C N4 N N N 166 C C5 C N N 167 C C6 C N N 168 C HOP3 H N N 169 C HOP2 H N N 170 C "H5'" H N N 171 C "H5''" H N N 172 C "H4'" H N N 173 C "H3'" H N N 174 C "HO3'" H N N 175 C "H2'" H N N 176 C "HO2'" H N N 177 C "H1'" H N N 178 C H41 H N N 179 C H42 H N N 180 C H5 H N N 181 C H6 H N N 182 CYS N N N N 183 CYS CA C N R 184 CYS C C N N 185 CYS O O N N 186 CYS CB C N N 187 CYS SG S N N 188 CYS OXT O N N 189 CYS H H N N 190 CYS H2 H N N 191 CYS HA H N N 192 CYS HB2 H N N 193 CYS HB3 H N N 194 CYS HG H N N 195 CYS HXT H N N 196 G OP3 O N N 197 G P P N N 198 G OP1 O N N 199 G OP2 O N N 200 G "O5'" O N N 201 G "C5'" C N N 202 G "C4'" C N R 203 G "O4'" O N N 204 G "C3'" C N S 205 G "O3'" O N N 206 G "C2'" C N R 207 G "O2'" O N N 208 G "C1'" C N R 209 G N9 N Y N 210 G C8 C Y N 211 G N7 N Y N 212 G C5 C Y N 213 G C6 C N N 214 G O6 O N N 215 G N1 N N N 216 G C2 C N N 217 G N2 N N N 218 G N3 N N N 219 G C4 C Y N 220 G HOP3 H N N 221 G HOP2 H N N 222 G "H5'" H N N 223 G "H5''" H N N 224 G "H4'" H N N 225 G "H3'" H N N 226 G "HO3'" H N N 227 G "H2'" H N N 228 G "HO2'" H N N 229 G "H1'" H N N 230 G H8 H N N 231 G H1 H N N 232 G H21 H N N 233 G H22 H N N 234 GLN N N N N 235 GLN CA C N S 236 GLN C C N N 237 GLN O O N N 238 GLN CB C N N 239 GLN CG C N N 240 GLN CD C N N 241 GLN OE1 O N N 242 GLN NE2 N N N 243 GLN OXT O N N 244 GLN H H N N 245 GLN H2 H N N 246 GLN HA H N N 247 GLN HB2 H N N 248 GLN HB3 H N N 249 GLN HG2 H N N 250 GLN HG3 H N N 251 GLN HE21 H N N 252 GLN HE22 H N N 253 GLN HXT H N N 254 GLU N N N N 255 GLU CA C N S 256 GLU C C N N 257 GLU O O N N 258 GLU CB C N N 259 GLU CG C N N 260 GLU CD C N N 261 GLU OE1 O N N 262 GLU OE2 O N N 263 GLU OXT O N N 264 GLU H H N N 265 GLU H2 H N N 266 GLU HA H N N 267 GLU HB2 H N N 268 GLU HB3 H N N 269 GLU HG2 H N N 270 GLU HG3 H N N 271 GLU HE2 H N N 272 GLU HXT H N N 273 GLY N N N N 274 GLY CA C N N 275 GLY C C N N 276 GLY O O N N 277 GLY OXT O N N 278 GLY H H N N 279 GLY H2 H N N 280 GLY HA2 H N N 281 GLY HA3 H N N 282 GLY HXT H N N 283 HIS N N N N 284 HIS CA C N S 285 HIS C C N N 286 HIS O O N N 287 HIS CB C N N 288 HIS CG C Y N 289 HIS ND1 N Y N 290 HIS CD2 C Y N 291 HIS CE1 C Y N 292 HIS NE2 N Y N 293 HIS OXT O N N 294 HIS H H N N 295 HIS H2 H N N 296 HIS HA H N N 297 HIS HB2 H N N 298 HIS HB3 H N N 299 HIS HD1 H N N 300 HIS HD2 H N N 301 HIS HE1 H N N 302 HIS HE2 H N N 303 HIS HXT H N N 304 HOH O O N N 305 HOH H1 H N N 306 HOH H2 H N N 307 ILE N N N N 308 ILE CA C N S 309 ILE C C N N 310 ILE O O N N 311 ILE CB C N S 312 ILE CG1 C N N 313 ILE CG2 C N N 314 ILE CD1 C N N 315 ILE OXT O N N 316 ILE H H N N 317 ILE H2 H N N 318 ILE HA H N N 319 ILE HB H N N 320 ILE HG12 H N N 321 ILE HG13 H N N 322 ILE HG21 H N N 323 ILE HG22 H N N 324 ILE HG23 H N N 325 ILE HD11 H N N 326 ILE HD12 H N N 327 ILE HD13 H N N 328 ILE HXT H N N 329 LEU N N N N 330 LEU CA C N S 331 LEU C C N N 332 LEU O O N N 333 LEU CB C N N 334 LEU CG C N N 335 LEU CD1 C N N 336 LEU CD2 C N N 337 LEU OXT O N N 338 LEU H H N N 339 LEU H2 H N N 340 LEU HA H N N 341 LEU HB2 H N N 342 LEU HB3 H N N 343 LEU HG H N N 344 LEU HD11 H N N 345 LEU HD12 H N N 346 LEU HD13 H N N 347 LEU HD21 H N N 348 LEU HD22 H N N 349 LEU HD23 H N N 350 LEU HXT H N N 351 LYS N N N N 352 LYS CA C N S 353 LYS C C N N 354 LYS O O N N 355 LYS CB C N N 356 LYS CG C N N 357 LYS CD C N N 358 LYS CE C N N 359 LYS NZ N N N 360 LYS OXT O N N 361 LYS H H N N 362 LYS H2 H N N 363 LYS HA H N N 364 LYS HB2 H N N 365 LYS HB3 H N N 366 LYS HG2 H N N 367 LYS HG3 H N N 368 LYS HD2 H N N 369 LYS HD3 H N N 370 LYS HE2 H N N 371 LYS HE3 H N N 372 LYS HZ1 H N N 373 LYS HZ2 H N N 374 LYS HZ3 H N N 375 LYS HXT H N N 376 MET N N N N 377 MET CA C N S 378 MET C C N N 379 MET O O N N 380 MET CB C N N 381 MET CG C N N 382 MET SD S N N 383 MET CE C N N 384 MET OXT O N N 385 MET H H N N 386 MET H2 H N N 387 MET HA H N N 388 MET HB2 H N N 389 MET HB3 H N N 390 MET HG2 H N N 391 MET HG3 H N N 392 MET HE1 H N N 393 MET HE2 H N N 394 MET HE3 H N N 395 MET HXT H N N 396 PHE N N N N 397 PHE CA C N S 398 PHE C C N N 399 PHE O O N N 400 PHE CB C N N 401 PHE CG C Y N 402 PHE CD1 C Y N 403 PHE CD2 C Y N 404 PHE CE1 C Y N 405 PHE CE2 C Y N 406 PHE CZ C Y N 407 PHE OXT O N N 408 PHE H H N N 409 PHE H2 H N N 410 PHE HA H N N 411 PHE HB2 H N N 412 PHE HB3 H N N 413 PHE HD1 H N N 414 PHE HD2 H N N 415 PHE HE1 H N N 416 PHE HE2 H N N 417 PHE HZ H N N 418 PHE HXT H N N 419 PRO N N N N 420 PRO CA C N S 421 PRO C C N N 422 PRO O O N N 423 PRO CB C N N 424 PRO CG C N N 425 PRO CD C N N 426 PRO OXT O N N 427 PRO H H N N 428 PRO HA H N N 429 PRO HB2 H N N 430 PRO HB3 H N N 431 PRO HG2 H N N 432 PRO HG3 H N N 433 PRO HD2 H N N 434 PRO HD3 H N N 435 PRO HXT H N N 436 SER N N N N 437 SER CA C N S 438 SER C C N N 439 SER O O N N 440 SER CB C N N 441 SER OG O N N 442 SER OXT O N N 443 SER H H N N 444 SER H2 H N N 445 SER HA H N N 446 SER HB2 H N N 447 SER HB3 H N N 448 SER HG H N N 449 SER HXT H N N 450 THR N N N N 451 THR CA C N S 452 THR C C N N 453 THR O O N N 454 THR CB C N R 455 THR OG1 O N N 456 THR CG2 C N N 457 THR OXT O N N 458 THR H H N N 459 THR H2 H N N 460 THR HA H N N 461 THR HB H N N 462 THR HG1 H N N 463 THR HG21 H N N 464 THR HG22 H N N 465 THR HG23 H N N 466 THR HXT H N N 467 TRP N N N N 468 TRP CA C N S 469 TRP C C N N 470 TRP O O N N 471 TRP CB C N N 472 TRP CG C Y N 473 TRP CD1 C Y N 474 TRP CD2 C Y N 475 TRP NE1 N Y N 476 TRP CE2 C Y N 477 TRP CE3 C Y N 478 TRP CZ2 C Y N 479 TRP CZ3 C Y N 480 TRP CH2 C Y N 481 TRP OXT O N N 482 TRP H H N N 483 TRP H2 H N N 484 TRP HA H N N 485 TRP HB2 H N N 486 TRP HB3 H N N 487 TRP HD1 H N N 488 TRP HE1 H N N 489 TRP HE3 H N N 490 TRP HZ2 H N N 491 TRP HZ3 H N N 492 TRP HH2 H N N 493 TRP HXT H N N 494 TYR N N N N 495 TYR CA C N S 496 TYR C C N N 497 TYR O O N N 498 TYR CB C N N 499 TYR CG C Y N 500 TYR CD1 C Y N 501 TYR CD2 C Y N 502 TYR CE1 C Y N 503 TYR CE2 C Y N 504 TYR CZ C Y N 505 TYR OH O N N 506 TYR OXT O N N 507 TYR H H N N 508 TYR H2 H N N 509 TYR HA H N N 510 TYR HB2 H N N 511 TYR HB3 H N N 512 TYR HD1 H N N 513 TYR HD2 H N N 514 TYR HE1 H N N 515 TYR HE2 H N N 516 TYR HH H N N 517 TYR HXT H N N 518 U OP3 O N N 519 U P P N N 520 U OP1 O N N 521 U OP2 O N N 522 U "O5'" O N N 523 U "C5'" C N N 524 U "C4'" C N R 525 U "O4'" O N N 526 U "C3'" C N S 527 U "O3'" O N N 528 U "C2'" C N R 529 U "O2'" O N N 530 U "C1'" C N R 531 U N1 N N N 532 U C2 C N N 533 U O2 O N N 534 U N3 N N N 535 U C4 C N N 536 U O4 O N N 537 U C5 C N N 538 U C6 C N N 539 U HOP3 H N N 540 U HOP2 H N N 541 U "H5'" H N N 542 U "H5''" H N N 543 U "H4'" H N N 544 U "H3'" H N N 545 U "HO3'" H N N 546 U "H2'" H N N 547 U "HO2'" H N N 548 U "H1'" H N N 549 U H3 H N N 550 U H5 H N N 551 U H6 H N N 552 VAL N N N N 553 VAL CA C N S 554 VAL C C N N 555 VAL O O N N 556 VAL CB C N N 557 VAL CG1 C N N 558 VAL CG2 C N N 559 VAL OXT O N N 560 VAL H H N N 561 VAL H2 H N N 562 VAL HA H N N 563 VAL HB H N N 564 VAL HG11 H N N 565 VAL HG12 H N N 566 VAL HG13 H N N 567 VAL HG21 H N N 568 VAL HG22 H N N 569 VAL HG23 H N N 570 VAL HXT H N N 571 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 AMP P O1P doub N N 52 AMP P O2P sing N N 53 AMP P O3P sing N N 54 AMP P "O5'" sing N N 55 AMP O2P HOP2 sing N N 56 AMP O3P HOP3 sing N N 57 AMP "O5'" "C5'" sing N N 58 AMP "C5'" "C4'" sing N N 59 AMP "C5'" "H5'1" sing N N 60 AMP "C5'" "H5'2" sing N N 61 AMP "C4'" "O4'" sing N N 62 AMP "C4'" "C3'" sing N N 63 AMP "C4'" "H4'" sing N N 64 AMP "O4'" "C1'" sing N N 65 AMP "C3'" "O3'" sing N N 66 AMP "C3'" "C2'" sing N N 67 AMP "C3'" "H3'" sing N N 68 AMP "O3'" "HO3'" sing N N 69 AMP "C2'" "O2'" sing N N 70 AMP "C2'" "C1'" sing N N 71 AMP "C2'" "H2'" sing N N 72 AMP "O2'" "HO2'" sing N N 73 AMP "C1'" N9 sing N N 74 AMP "C1'" "H1'" sing N N 75 AMP N9 C8 sing Y N 76 AMP N9 C4 sing Y N 77 AMP C8 N7 doub Y N 78 AMP C8 H8 sing N N 79 AMP N7 C5 sing Y N 80 AMP C5 C6 sing Y N 81 AMP C5 C4 doub Y N 82 AMP C6 N6 sing N N 83 AMP C6 N1 doub Y N 84 AMP N6 HN61 sing N N 85 AMP N6 HN62 sing N N 86 AMP N1 C2 sing Y N 87 AMP C2 N3 doub Y N 88 AMP C2 H2 sing N N 89 AMP N3 C4 sing Y N 90 ARG N CA sing N N 91 ARG N H sing N N 92 ARG N H2 sing N N 93 ARG CA C sing N N 94 ARG CA CB sing N N 95 ARG CA HA sing N N 96 ARG C O doub N N 97 ARG C OXT sing N N 98 ARG CB CG sing N N 99 ARG CB HB2 sing N N 100 ARG CB HB3 sing N N 101 ARG CG CD sing N N 102 ARG CG HG2 sing N N 103 ARG CG HG3 sing N N 104 ARG CD NE sing N N 105 ARG CD HD2 sing N N 106 ARG CD HD3 sing N N 107 ARG NE CZ sing N N 108 ARG NE HE sing N N 109 ARG CZ NH1 sing N N 110 ARG CZ NH2 doub N N 111 ARG NH1 HH11 sing N N 112 ARG NH1 HH12 sing N N 113 ARG NH2 HH21 sing N N 114 ARG NH2 HH22 sing N N 115 ARG OXT HXT sing N N 116 ASN N CA sing N N 117 ASN N H sing N N 118 ASN N H2 sing N N 119 ASN CA C sing N N 120 ASN CA CB sing N N 121 ASN CA HA sing N N 122 ASN C O doub N N 123 ASN C OXT sing N N 124 ASN CB CG sing N N 125 ASN CB HB2 sing N N 126 ASN CB HB3 sing N N 127 ASN CG OD1 doub N N 128 ASN CG ND2 sing N N 129 ASN ND2 HD21 sing N N 130 ASN ND2 HD22 sing N N 131 ASN OXT HXT sing N N 132 ASP N CA sing N N 133 ASP N H sing N N 134 ASP N H2 sing N N 135 ASP CA C sing N N 136 ASP CA CB sing N N 137 ASP CA HA sing N N 138 ASP C O doub N N 139 ASP C OXT sing N N 140 ASP CB CG sing N N 141 ASP CB HB2 sing N N 142 ASP CB HB3 sing N N 143 ASP CG OD1 doub N N 144 ASP CG OD2 sing N N 145 ASP OD2 HD2 sing N N 146 ASP OXT HXT sing N N 147 C OP3 P sing N N 148 C OP3 HOP3 sing N N 149 C P OP1 doub N N 150 C P OP2 sing N N 151 C P "O5'" sing N N 152 C OP2 HOP2 sing N N 153 C "O5'" "C5'" sing N N 154 C "C5'" "C4'" sing N N 155 C "C5'" "H5'" sing N N 156 C "C5'" "H5''" sing N N 157 C "C4'" "O4'" sing N N 158 C "C4'" "C3'" sing N N 159 C "C4'" "H4'" sing N N 160 C "O4'" "C1'" sing N N 161 C "C3'" "O3'" sing N N 162 C "C3'" "C2'" sing N N 163 C "C3'" "H3'" sing N N 164 C "O3'" "HO3'" sing N N 165 C "C2'" "O2'" sing N N 166 C "C2'" "C1'" sing N N 167 C "C2'" "H2'" sing N N 168 C "O2'" "HO2'" sing N N 169 C "C1'" N1 sing N N 170 C "C1'" "H1'" sing N N 171 C N1 C2 sing N N 172 C N1 C6 sing N N 173 C C2 O2 doub N N 174 C C2 N3 sing N N 175 C N3 C4 doub N N 176 C C4 N4 sing N N 177 C C4 C5 sing N N 178 C N4 H41 sing N N 179 C N4 H42 sing N N 180 C C5 C6 doub N N 181 C C5 H5 sing N N 182 C C6 H6 sing N N 183 CYS N CA sing N N 184 CYS N H sing N N 185 CYS N H2 sing N N 186 CYS CA C sing N N 187 CYS CA CB sing N N 188 CYS CA HA sing N N 189 CYS C O doub N N 190 CYS C OXT sing N N 191 CYS CB SG sing N N 192 CYS CB HB2 sing N N 193 CYS CB HB3 sing N N 194 CYS SG HG sing N N 195 CYS OXT HXT sing N N 196 G OP3 P sing N N 197 G OP3 HOP3 sing N N 198 G P OP1 doub N N 199 G P OP2 sing N N 200 G P "O5'" sing N N 201 G OP2 HOP2 sing N N 202 G "O5'" "C5'" sing N N 203 G "C5'" "C4'" sing N N 204 G "C5'" "H5'" sing N N 205 G "C5'" "H5''" sing N N 206 G "C4'" "O4'" sing N N 207 G "C4'" "C3'" sing N N 208 G "C4'" "H4'" sing N N 209 G "O4'" "C1'" sing N N 210 G "C3'" "O3'" sing N N 211 G "C3'" "C2'" sing N N 212 G "C3'" "H3'" sing N N 213 G "O3'" "HO3'" sing N N 214 G "C2'" "O2'" sing N N 215 G "C2'" "C1'" sing N N 216 G "C2'" "H2'" sing N N 217 G "O2'" "HO2'" sing N N 218 G "C1'" N9 sing N N 219 G "C1'" "H1'" sing N N 220 G N9 C8 sing Y N 221 G N9 C4 sing Y N 222 G C8 N7 doub Y N 223 G C8 H8 sing N N 224 G N7 C5 sing Y N 225 G C5 C6 sing N N 226 G C5 C4 doub Y N 227 G C6 O6 doub N N 228 G C6 N1 sing N N 229 G N1 C2 sing N N 230 G N1 H1 sing N N 231 G C2 N2 sing N N 232 G C2 N3 doub N N 233 G N2 H21 sing N N 234 G N2 H22 sing N N 235 G N3 C4 sing N N 236 GLN N CA sing N N 237 GLN N H sing N N 238 GLN N H2 sing N N 239 GLN CA C sing N N 240 GLN CA CB sing N N 241 GLN CA HA sing N N 242 GLN C O doub N N 243 GLN C OXT sing N N 244 GLN CB CG sing N N 245 GLN CB HB2 sing N N 246 GLN CB HB3 sing N N 247 GLN CG CD sing N N 248 GLN CG HG2 sing N N 249 GLN CG HG3 sing N N 250 GLN CD OE1 doub N N 251 GLN CD NE2 sing N N 252 GLN NE2 HE21 sing N N 253 GLN NE2 HE22 sing N N 254 GLN OXT HXT sing N N 255 GLU N CA sing N N 256 GLU N H sing N N 257 GLU N H2 sing N N 258 GLU CA C sing N N 259 GLU CA CB sing N N 260 GLU CA HA sing N N 261 GLU C O doub N N 262 GLU C OXT sing N N 263 GLU CB CG sing N N 264 GLU CB HB2 sing N N 265 GLU CB HB3 sing N N 266 GLU CG CD sing N N 267 GLU CG HG2 sing N N 268 GLU CG HG3 sing N N 269 GLU CD OE1 doub N N 270 GLU CD OE2 sing N N 271 GLU OE2 HE2 sing N N 272 GLU OXT HXT sing N N 273 GLY N CA sing N N 274 GLY N H sing N N 275 GLY N H2 sing N N 276 GLY CA C sing N N 277 GLY CA HA2 sing N N 278 GLY CA HA3 sing N N 279 GLY C O doub N N 280 GLY C OXT sing N N 281 GLY OXT HXT sing N N 282 HIS N CA sing N N 283 HIS N H sing N N 284 HIS N H2 sing N N 285 HIS CA C sing N N 286 HIS CA CB sing N N 287 HIS CA HA sing N N 288 HIS C O doub N N 289 HIS C OXT sing N N 290 HIS CB CG sing N N 291 HIS CB HB2 sing N N 292 HIS CB HB3 sing N N 293 HIS CG ND1 sing Y N 294 HIS CG CD2 doub Y N 295 HIS ND1 CE1 doub Y N 296 HIS ND1 HD1 sing N N 297 HIS CD2 NE2 sing Y N 298 HIS CD2 HD2 sing N N 299 HIS CE1 NE2 sing Y N 300 HIS CE1 HE1 sing N N 301 HIS NE2 HE2 sing N N 302 HIS OXT HXT sing N N 303 HOH O H1 sing N N 304 HOH O H2 sing N N 305 ILE N CA sing N N 306 ILE N H sing N N 307 ILE N H2 sing N N 308 ILE CA C sing N N 309 ILE CA CB sing N N 310 ILE CA HA sing N N 311 ILE C O doub N N 312 ILE C OXT sing N N 313 ILE CB CG1 sing N N 314 ILE CB CG2 sing N N 315 ILE CB HB sing N N 316 ILE CG1 CD1 sing N N 317 ILE CG1 HG12 sing N N 318 ILE CG1 HG13 sing N N 319 ILE CG2 HG21 sing N N 320 ILE CG2 HG22 sing N N 321 ILE CG2 HG23 sing N N 322 ILE CD1 HD11 sing N N 323 ILE CD1 HD12 sing N N 324 ILE CD1 HD13 sing N N 325 ILE OXT HXT sing N N 326 LEU N CA sing N N 327 LEU N H sing N N 328 LEU N H2 sing N N 329 LEU CA C sing N N 330 LEU CA CB sing N N 331 LEU CA HA sing N N 332 LEU C O doub N N 333 LEU C OXT sing N N 334 LEU CB CG sing N N 335 LEU CB HB2 sing N N 336 LEU CB HB3 sing N N 337 LEU CG CD1 sing N N 338 LEU CG CD2 sing N N 339 LEU CG HG sing N N 340 LEU CD1 HD11 sing N N 341 LEU CD1 HD12 sing N N 342 LEU CD1 HD13 sing N N 343 LEU CD2 HD21 sing N N 344 LEU CD2 HD22 sing N N 345 LEU CD2 HD23 sing N N 346 LEU OXT HXT sing N N 347 LYS N CA sing N N 348 LYS N H sing N N 349 LYS N H2 sing N N 350 LYS CA C sing N N 351 LYS CA CB sing N N 352 LYS CA HA sing N N 353 LYS C O doub N N 354 LYS C OXT sing N N 355 LYS CB CG sing N N 356 LYS CB HB2 sing N N 357 LYS CB HB3 sing N N 358 LYS CG CD sing N N 359 LYS CG HG2 sing N N 360 LYS CG HG3 sing N N 361 LYS CD CE sing N N 362 LYS CD HD2 sing N N 363 LYS CD HD3 sing N N 364 LYS CE NZ sing N N 365 LYS CE HE2 sing N N 366 LYS CE HE3 sing N N 367 LYS NZ HZ1 sing N N 368 LYS NZ HZ2 sing N N 369 LYS NZ HZ3 sing N N 370 LYS OXT HXT sing N N 371 MET N CA sing N N 372 MET N H sing N N 373 MET N H2 sing N N 374 MET CA C sing N N 375 MET CA CB sing N N 376 MET CA HA sing N N 377 MET C O doub N N 378 MET C OXT sing N N 379 MET CB CG sing N N 380 MET CB HB2 sing N N 381 MET CB HB3 sing N N 382 MET CG SD sing N N 383 MET CG HG2 sing N N 384 MET CG HG3 sing N N 385 MET SD CE sing N N 386 MET CE HE1 sing N N 387 MET CE HE2 sing N N 388 MET CE HE3 sing N N 389 MET OXT HXT sing N N 390 PHE N CA sing N N 391 PHE N H sing N N 392 PHE N H2 sing N N 393 PHE CA C sing N N 394 PHE CA CB sing N N 395 PHE CA HA sing N N 396 PHE C O doub N N 397 PHE C OXT sing N N 398 PHE CB CG sing N N 399 PHE CB HB2 sing N N 400 PHE CB HB3 sing N N 401 PHE CG CD1 doub Y N 402 PHE CG CD2 sing Y N 403 PHE CD1 CE1 sing Y N 404 PHE CD1 HD1 sing N N 405 PHE CD2 CE2 doub Y N 406 PHE CD2 HD2 sing N N 407 PHE CE1 CZ doub Y N 408 PHE CE1 HE1 sing N N 409 PHE CE2 CZ sing Y N 410 PHE CE2 HE2 sing N N 411 PHE CZ HZ sing N N 412 PHE OXT HXT sing N N 413 PRO N CA sing N N 414 PRO N CD sing N N 415 PRO N H sing N N 416 PRO CA C sing N N 417 PRO CA CB sing N N 418 PRO CA HA sing N N 419 PRO C O doub N N 420 PRO C OXT sing N N 421 PRO CB CG sing N N 422 PRO CB HB2 sing N N 423 PRO CB HB3 sing N N 424 PRO CG CD sing N N 425 PRO CG HG2 sing N N 426 PRO CG HG3 sing N N 427 PRO CD HD2 sing N N 428 PRO CD HD3 sing N N 429 PRO OXT HXT sing N N 430 SER N CA sing N N 431 SER N H sing N N 432 SER N H2 sing N N 433 SER CA C sing N N 434 SER CA CB sing N N 435 SER CA HA sing N N 436 SER C O doub N N 437 SER C OXT sing N N 438 SER CB OG sing N N 439 SER CB HB2 sing N N 440 SER CB HB3 sing N N 441 SER OG HG sing N N 442 SER OXT HXT sing N N 443 THR N CA sing N N 444 THR N H sing N N 445 THR N H2 sing N N 446 THR CA C sing N N 447 THR CA CB sing N N 448 THR CA HA sing N N 449 THR C O doub N N 450 THR C OXT sing N N 451 THR CB OG1 sing N N 452 THR CB CG2 sing N N 453 THR CB HB sing N N 454 THR OG1 HG1 sing N N 455 THR CG2 HG21 sing N N 456 THR CG2 HG22 sing N N 457 THR CG2 HG23 sing N N 458 THR OXT HXT sing N N 459 TRP N CA sing N N 460 TRP N H sing N N 461 TRP N H2 sing N N 462 TRP CA C sing N N 463 TRP CA CB sing N N 464 TRP CA HA sing N N 465 TRP C O doub N N 466 TRP C OXT sing N N 467 TRP CB CG sing N N 468 TRP CB HB2 sing N N 469 TRP CB HB3 sing N N 470 TRP CG CD1 doub Y N 471 TRP CG CD2 sing Y N 472 TRP CD1 NE1 sing Y N 473 TRP CD1 HD1 sing N N 474 TRP CD2 CE2 doub Y N 475 TRP CD2 CE3 sing Y N 476 TRP NE1 CE2 sing Y N 477 TRP NE1 HE1 sing N N 478 TRP CE2 CZ2 sing Y N 479 TRP CE3 CZ3 doub Y N 480 TRP CE3 HE3 sing N N 481 TRP CZ2 CH2 doub Y N 482 TRP CZ2 HZ2 sing N N 483 TRP CZ3 CH2 sing Y N 484 TRP CZ3 HZ3 sing N N 485 TRP CH2 HH2 sing N N 486 TRP OXT HXT sing N N 487 TYR N CA sing N N 488 TYR N H sing N N 489 TYR N H2 sing N N 490 TYR CA C sing N N 491 TYR CA CB sing N N 492 TYR CA HA sing N N 493 TYR C O doub N N 494 TYR C OXT sing N N 495 TYR CB CG sing N N 496 TYR CB HB2 sing N N 497 TYR CB HB3 sing N N 498 TYR CG CD1 doub Y N 499 TYR CG CD2 sing Y N 500 TYR CD1 CE1 sing Y N 501 TYR CD1 HD1 sing N N 502 TYR CD2 CE2 doub Y N 503 TYR CD2 HD2 sing N N 504 TYR CE1 CZ doub Y N 505 TYR CE1 HE1 sing N N 506 TYR CE2 CZ sing Y N 507 TYR CE2 HE2 sing N N 508 TYR CZ OH sing N N 509 TYR OH HH sing N N 510 TYR OXT HXT sing N N 511 U OP3 P sing N N 512 U OP3 HOP3 sing N N 513 U P OP1 doub N N 514 U P OP2 sing N N 515 U P "O5'" sing N N 516 U OP2 HOP2 sing N N 517 U "O5'" "C5'" sing N N 518 U "C5'" "C4'" sing N N 519 U "C5'" "H5'" sing N N 520 U "C5'" "H5''" sing N N 521 U "C4'" "O4'" sing N N 522 U "C4'" "C3'" sing N N 523 U "C4'" "H4'" sing N N 524 U "O4'" "C1'" sing N N 525 U "C3'" "O3'" sing N N 526 U "C3'" "C2'" sing N N 527 U "C3'" "H3'" sing N N 528 U "O3'" "HO3'" sing N N 529 U "C2'" "O2'" sing N N 530 U "C2'" "C1'" sing N N 531 U "C2'" "H2'" sing N N 532 U "O2'" "HO2'" sing N N 533 U "C1'" N1 sing N N 534 U "C1'" "H1'" sing N N 535 U N1 C2 sing N N 536 U N1 C6 sing N N 537 U C2 O2 doub N N 538 U C2 N3 sing N N 539 U N3 C4 sing N N 540 U N3 H3 sing N N 541 U C4 O4 doub N N 542 U C4 C5 sing N N 543 U C5 C6 doub N N 544 U C5 H5 sing N N 545 U C6 H6 sing N N 546 VAL N CA sing N N 547 VAL N H sing N N 548 VAL N H2 sing N N 549 VAL CA C sing N N 550 VAL CA CB sing N N 551 VAL CA HA sing N N 552 VAL C O doub N N 553 VAL C OXT sing N N 554 VAL CB CG1 sing N N 555 VAL CB CG2 sing N N 556 VAL CB HB sing N N 557 VAL CG1 HG11 sing N N 558 VAL CG1 HG12 sing N N 559 VAL CG1 HG13 sing N N 560 VAL CG2 HG21 sing N N 561 VAL CG2 HG22 sing N N 562 VAL CG2 HG23 sing N N 563 VAL OXT HXT sing N N 564 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8RBJ 'double helix' 8RBJ 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B U 2 1_555 C A 7 1_555 -0.089 0.044 0.006 -2.470 -11.445 3.527 1 C_U3:A8_B C 3 ? B 8 ? 20 1 1 B C 3 1_555 C G 6 1_555 0.224 -0.142 0.202 -0.872 -6.862 -1.117 2 C_C4:G7_B C 4 ? B 7 ? 19 1 1 B U 4 1_555 C G 5 1_555 2.225 -0.500 -0.293 7.559 -5.382 -2.480 3 C_U5:G6_B C 5 ? B 6 ? 28 1 1 B G 5 1_555 C U 4 1_555 -2.181 -0.649 -0.414 -3.484 -5.522 0.034 4 C_G6:U5_B C 6 ? B 5 ? 28 1 1 B G 6 1_555 C C 3 1_555 -0.056 -0.163 -0.098 -3.859 -3.194 0.588 5 C_G7:C4_B C 7 ? B 4 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B U 2 1_555 C A 7 1_555 B C 3 1_555 C G 6 1_555 -0.281 -1.752 3.303 -3.449 2.718 33.604 -3.441 -0.068 3.168 4.676 5.935 33.881 1 CC_U3C4:G7A8_BB C 3 ? B 8 ? C 4 ? B 7 ? 1 B C 3 1_555 C G 6 1_555 B U 4 1_555 C G 5 1_555 -0.228 -1.770 3.075 2.665 3.517 33.845 -3.524 0.774 2.856 6.009 -4.554 34.123 2 CC_C4U5:G6G7_BB C 4 ? B 7 ? C 5 ? B 6 ? 1 B U 4 1_555 C G 5 1_555 B G 5 1_555 C U 4 1_555 0.382 -2.764 3.598 -1.562 9.979 14.918 -13.677 -1.977 1.429 33.833 5.294 17.999 3 CC_U5G6:U5G6_BB C 5 ? B 6 ? C 6 ? B 5 ? 1 B G 5 1_555 C U 4 1_555 B G 6 1_555 C C 3 1_555 -0.545 -1.972 3.312 -4.623 4.686 35.490 -3.837 0.235 3.079 7.607 7.505 36.076 4 CC_G6G7:C4U5_BB C 6 ? B 5 ? C 7 ? B 4 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'German Research Foundation (DFG)' Germany 442512666 1 'German Research Foundation (DFG)' Germany 439669440 2 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6N67 _pdbx_initial_refinement_model.details ? # _space_group.name_H-M_alt 'P 21 21 21' _space_group.name_Hall 'P 2ac 2ab' _space_group.IT_number 19 _space_group.crystal_system orthorhombic _space_group.id 1 # _atom_sites.entry_id 8RBJ _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.019395 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013270 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008028 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ # loop_ #