HEADER CELL ADHESION 25-DEC-23 8RKH TITLE CRYSTAL STRUCTURE OF THE ZP-N2 AND ZP-N3 DOMAINS OF MOUSE ZP2 (MZP2- TITLE 2 N2N3) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZONA PELLUCIDA SPERM-BINDING PROTEIN 2; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ZONA PELLUCIDA GLYCOPROTEIN 2,ZP-2,ZONA PELLUCIDA PROTEIN A; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 ORGAN: OVARY; SOURCE 6 GENE: ZP2, ZP-2, ZPA; SOURCE 7 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 8 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 10 EXPRESSION_SYSTEM_CELL_LINE: HEK293S; SOURCE 11 EXPRESSION_SYSTEM_ATCC_NUMBER: CRL-3022; SOURCE 12 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 13 EXPRESSION_SYSTEM_PLASMID: PHLSEC2 KEYWDS CELL ADHESION, FERTILIZATION, EGG-SPERM INTERACTION, GAMETE KEYWDS 2 RECOGNITION, SPERM RECEPTOR, EXTRACELLULAR MATRIX, EGG COAT, ZONA KEYWDS 3 PELLUCIDA, GLYCOPROTEIN, N-GLYCAN, STRUCTURAL PROTEIN, ZP-N DOMAIN, KEYWDS 4 BLOCK TO POLYSPERMY, POST-FERTILIZATION CLEAVAGE, OVASTACIN EXPDTA X-RAY DIFFRACTION AUTHOR D.FAHRENKAMP,D.DE SANCTIS,L.JOVINE REVDAT 2 27-MAR-24 8RKH 1 JRNL REVDAT 1 13-MAR-24 8RKH 0 JRNL AUTH S.NISHIO,C.EMORI,B.WISEMAN,D.FAHRENKAMP,E.DIOGUARDI, JRNL AUTH 2 S.ZAMORA-CABALLERO,M.BOKHOVE,L.HAN,A.STSIAPANAVA,B.ALGARRA, JRNL AUTH 3 Y.LU,M.KODANI,R.E.BAINBRIDGE,K.M.KOMONDOR,A.E.CARLSON, JRNL AUTH 4 M.LANDREH,D.DE SANCTIS,S.YASUMASU,M.IKAWA,L.JOVINE JRNL TITL ZP2 CLEAVAGE BLOCKS POLYSPERMY BY MODULATING THE JRNL TITL 2 ARCHITECTURE OF THE EGG COAT. JRNL REF CELL V. 187 1440 2024 JRNL REFN ISSN 1097-4172 JRNL PMID 38490181 JRNL DOI 10.1016/J.CELL.2024.02.013 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.D.BLEIL,P.M.WASSARMAN REMARK 1 TITL SYNTHESIS OF ZONA PELLUCIDA PROTEINS BY DENUDED AND REMARK 1 TITL 2 FOLLICLE-ENCLOSED MOUSE OOCYTES DURING CULTURE IN VITRO. REMARK 1 REF PROC NATL ACAD SCI U S A V. 77 1029 1980 REMARK 1 REFN ISSN 0027-8424 REMARK 1 PMID 6928658 REMARK 1 DOI 10.1073/PNAS.77.2.1029 REMARK 1 REFERENCE 2 REMARK 1 AUTH J.D.BLEIL,C.F.BEALL,P.M.WASSARMAN REMARK 1 TITL MAMMALIAN SPERM-EGG INTERACTION: FERTILIZATION OF MOUSE EGGS REMARK 1 TITL 2 TRIGGERS MODIFICATION OF THE MAJOR ZONA PELLUCIDA REMARK 1 TITL 3 GLYCOPROTEIN, ZP2. REMARK 1 REF DEV BIOL V. 86 189 1981 REMARK 1 REFN ISSN 0012-1606 REMARK 1 PMID 6793422 REMARK 1 DOI 10.1016/0012-1606(81)90329-8 REMARK 1 REFERENCE 3 REMARK 1 AUTH J.M.GREVE,G.S.SALZMANN,R.J.ROLLER,P.M.WASSARMAN REMARK 1 TITL BIOSYNTHESIS OF THE MAJOR ZONA PELLUCIDA GLYCOPROTEIN REMARK 1 TITL 2 SECRETED BY OOCYTES DURING MAMMALIAN OOGENESIS. REMARK 1 REF CELL V. 31 749 1982 REMARK 1 REFN ISSN 0092-8674 REMARK 1 PMID 6819087 REMARK 1 DOI 10.1016/0092-8674(82)90329-4 REMARK 1 REFERENCE 4 REMARK 1 AUTH L.F.LIANG,S.M.CHAMOW,J.DEAN REMARK 1 TITL OOCYTE-SPECIFIC EXPRESSION OF MOUSE ZP-2: DEVELOPMENTAL REMARK 1 TITL 2 REGULATION OF THE ZONA PELLUCIDA GENES. REMARK 1 REF MOL CELL BIOL V. 10 1507 1990 REMARK 1 REFN ISSN 0270-7306 REMARK 1 PMID 1690843 REMARK 1 DOI 10.1128/MCB.10.4.1507-1515.1990 REMARK 1 REFERENCE 5 REMARK 1 AUTH T.L.RANKIN,M.O'BRIEN,E.LEE,K.WIGGLESWORTH,J.EPPIG,J.DEAN REMARK 1 TITL DEFECTIVE ZONAE PELLUCIDAE IN ZP2-NULL MICE DISRUPT REMARK 1 TITL 2 FOLLICULOGENESIS, FERTILITY AND DEVELOPMENT. REMARK 1 REF DEVELOPMENT V. 128 1119 2001 REMARK 1 REFN ISSN 0950-1991 REMARK 1 PMID 11245577 REMARK 1 DOI 10.1242/DEV.128.7.1119 REMARK 1 REFERENCE 6 REMARK 1 AUTH E.S.BOJA,T.HOODBHOY,H.M.FALES,J.DEAN REMARK 1 TITL STRUCTURAL CHARACTERIZATION OF NATIVE MOUSE ZONA PELLUCIDA REMARK 1 TITL 2 PROTEINS USING MASS SPECTROMETRY. REMARK 1 REF J BIOL CHEM V. 278 34189 2003 REMARK 1 REFN ISSN 0021-9258 REMARK 1 PMID 12799386 REMARK 1 DOI 10.1074/JBC.M304026200 REMARK 1 REFERENCE 7 REMARK 1 AUTH T.L.RANKIN,J.S.COLEMAN,O.EPIFANO,T.HOODBHOY,S.G.TURNER, REMARK 1 AUTH 2 P.E.CASTLE,E.LEE,R.GORE-LANGTON,J.DEAN REMARK 1 TITL FERTILITY AND TAXON-SPECIFIC SPERM BINDING PERSIST AFTER REMARK 1 TITL 2 REPLACEMENT OF MOUSE SPERM RECEPTORS WITH HUMAN HOMOLOGS. REMARK 1 REF DEV CELL V. 5 33 2003 REMARK 1 REFN ISSN 1534-5807 REMARK 1 PMID 12852850 REMARK 1 DOI 10.1016/S1534-5807(03)00195-3 REMARK 1 REFERENCE 8 REMARK 1 AUTH M.MONNE,L.HAN,T.SCHWEND,S.BURENDAHL,L.JOVINE REMARK 1 TITL CRYSTAL STRUCTURE OF THE ZP-N DOMAIN OF ZP3 REVEALS THE CORE REMARK 1 TITL 2 FOLD OF ANIMAL EGG COATS. REMARK 1 REF NATURE V. 456 653 2008 REMARK 1 REFN ESSN 1476-4687 REMARK 1 PMID 19052627 REMARK 1 DOI 10.1038/NATURE07599 REMARK 1 REFERENCE 9 REMARK 1 AUTH G.GAHLAY,L.GAUTHIER,B.BAIBAKOV,O.EPIFANO,J.DEAN REMARK 1 TITL GAMETE RECOGNITION IN MICE DEPENDS ON THE CLEAVAGE STATUS OF REMARK 1 TITL 2 AN EGG'S ZONA PELLUCIDA PROTEIN. REMARK 1 REF SCIENCE V. 329 216 2010 REMARK 1 REFN ESSN 1095-9203 REMARK 1 PMID 20616279 REMARK 1 DOI 10.1126/SCIENCE.1188178 REMARK 1 REFERENCE 10 REMARK 1 AUTH I.RAJ,H.SADAT AL HOSSEINI,E.DIOGUARDI,K.NISHIMURA,L.HAN, REMARK 1 AUTH 2 A.VILLA,D.DE SANCTIS,L.JOVINE REMARK 1 TITL STRUCTURAL BASIS OF EGG COAT-SPERM RECOGNITION AT REMARK 1 TITL 2 FERTILIZATION. REMARK 1 REF CELL V. 169 1315 2017 REMARK 1 REFN ISSN 1097-4172 REMARK 1 PMID 28622512 REMARK 1 DOI 10.1016/J.CELL.2017.05.033 REMARK 1 REFERENCE 11 REMARK 1 AUTH M.BOKHOVE,L.JOVINE REMARK 1 TITL STRUCTURE OF ZONA PELLUCIDA MODULE PROTEINS. REMARK 1 REF CURR TOP DEV BIOL V. 130 413 2018 REMARK 1 REFN ISSN 1557-8933 REMARK 1 PMID 29853186 REMARK 1 DOI 10.1016/BS.CTDB.2018.02.007 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 44811 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 2223 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.7300 - 4.7900 0.99 2761 143 0.1698 0.2078 REMARK 3 2 4.7900 - 3.8000 0.99 2713 143 0.1597 0.1769 REMARK 3 3 3.8000 - 3.3200 1.00 2679 137 0.1963 0.2492 REMARK 3 4 3.3200 - 3.0200 1.00 2676 143 0.2285 0.2553 REMARK 3 5 3.0200 - 2.8000 0.99 2681 138 0.2407 0.2539 REMARK 3 6 2.8000 - 2.6300 1.00 2668 140 0.2401 0.2713 REMARK 3 7 2.6300 - 2.5000 0.99 2639 142 0.2490 0.3000 REMARK 3 8 2.5000 - 2.3900 0.99 2663 137 0.2601 0.3228 REMARK 3 9 2.3900 - 2.3000 0.99 2666 143 0.2660 0.2921 REMARK 3 10 2.3000 - 2.2200 0.99 2654 135 0.2775 0.3056 REMARK 3 11 2.2200 - 2.1500 0.99 2619 138 0.2911 0.3208 REMARK 3 12 2.1500 - 2.0900 0.99 2641 138 0.3090 0.3777 REMARK 3 13 2.0900 - 2.0400 0.99 2659 135 0.3386 0.3763 REMARK 3 14 2.0400 - 1.9900 0.99 2628 140 0.3604 0.4232 REMARK 3 15 1.9900 - 1.9400 0.99 2600 135 0.3759 0.4247 REMARK 3 16 1.9400 - 1.9000 0.99 2641 136 0.3980 0.3825 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.306 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.319 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.73 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3723 REMARK 3 ANGLE : 0.790 5057 REMARK 3 CHIRALITY : 0.852 619 REMARK 3 PLANARITY : 0.005 624 REMARK 3 DIHEDRAL : 12.481 1376 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESI 401:403) REMARK 3 ORIGIN FOR THE GROUP (A): 58.2777 30.3905 4.1680 REMARK 3 T TENSOR REMARK 3 T11: 0.3499 T22: 0.3016 REMARK 3 T33: 0.3420 T12: 0.0077 REMARK 3 T13: 0.0125 T23: 0.0200 REMARK 3 L TENSOR REMARK 3 L11: 1.9488 L22: 1.2094 REMARK 3 L33: 4.1464 L12: 0.3466 REMARK 3 L13: -0.6452 L23: 0.3820 REMARK 3 S TENSOR REMARK 3 S11: -0.1541 S12: -0.0202 S13: -0.1019 REMARK 3 S21: -0.0388 S22: 0.0468 S23: -0.0507 REMARK 3 S31: 0.2823 S32: 0.2850 S33: 0.1194 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN C AND (RESI 1:6) REMARK 3 ORIGIN FOR THE GROUP (A): 78.9284 39.3554 -15.2062 REMARK 3 T TENSOR REMARK 3 T11: 0.4586 T22: 0.5967 REMARK 3 T33: 0.4250 T12: -0.0860 REMARK 3 T13: -0.0449 T23: 0.0987 REMARK 3 L TENSOR REMARK 3 L11: 5.6170 L22: 1.2105 REMARK 3 L33: 1.2286 L12: -1.0046 REMARK 3 L13: 0.0498 L23: -0.1191 REMARK 3 S TENSOR REMARK 3 S11: -0.0142 S12: 0.6698 S13: 0.5380 REMARK 3 S21: -0.2794 S22: 0.0349 S23: 0.0345 REMARK 3 S31: -0.1936 S32: 0.0790 S33: -0.0529 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN B AND (RESI 401:402) REMARK 3 ORIGIN FOR THE GROUP (A): 39.6013 48.4580 16.8028 REMARK 3 T TENSOR REMARK 3 T11: 0.3475 T22: 0.2405 REMARK 3 T33: 0.3357 T12: -0.0166 REMARK 3 T13: 0.0169 T23: -0.0279 REMARK 3 L TENSOR REMARK 3 L11: 5.5809 L22: 1.3613 REMARK 3 L33: 2.4165 L12: -1.2386 REMARK 3 L13: -0.1425 L23: -0.4343 REMARK 3 S TENSOR REMARK 3 S11: -0.0680 S12: -0.1902 S13: 0.2757 REMARK 3 S21: 0.0069 S22: 0.1082 S23: -0.0800 REMARK 3 S31: -0.1177 S32: 0.0624 S33: -0.0535 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D AND (RESI 1:2) REMARK 3 ORIGIN FOR THE GROUP (A): 16.2964 40.3317 29.3126 REMARK 3 T TENSOR REMARK 3 T11: 0.4997 T22: 0.4042 REMARK 3 T33: 0.4317 T12: -0.0328 REMARK 3 T13: 0.0122 T23: 0.0614 REMARK 3 L TENSOR REMARK 3 L11: 2.4702 L22: 4.1380 REMARK 3 L33: 2.5402 L12: -0.4489 REMARK 3 L13: -0.3626 L23: 0.8988 REMARK 3 S TENSOR REMARK 3 S11: -0.0309 S12: -0.1510 S13: -0.2702 REMARK 3 S21: 0.2559 S22: -0.0410 S23: 0.0110 REMARK 3 S31: 0.2981 S32: -0.2150 S33: 0.0854 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and resid 145 through 361) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and (resid 145 through 303 or REMARK 3 resid 306 through 361)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8RKH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-JAN-24. REMARK 100 THE DEPOSITION ID IS D_1292135628. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-MAY-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91942 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS NOV 1, 2016 BUILT=20161205 REMARK 200 DATA SCALING SOFTWARE : XSCALE NOV 1, 2016 REMARK 200 BUILT=20161205 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44849 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 43.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : 2.33000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL 1.13_2998 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% (W/V) PEG 3350, 0.2 M NA-NITRATE, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 81.50500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.08500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 81.50500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 27.08500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 132 REMARK 465 THR A 133 REMARK 465 GLY A 134 REMARK 465 PRO A 135 REMARK 465 ALA A 136 REMARK 465 ILE A 137 REMARK 465 GLN A 138 REMARK 465 ALA A 139 REMARK 465 GLU A 140 REMARK 465 THR A 141 REMARK 465 HIS A 142 REMARK 465 GLU A 143 REMARK 465 ILE A 144 REMARK 465 THR A 304 REMARK 465 ASN A 305 REMARK 465 HIS A 366 REMARK 465 HIS A 367 REMARK 465 HIS A 368 REMARK 465 GLU B 132 REMARK 465 THR B 133 REMARK 465 GLY B 134 REMARK 465 PRO B 135 REMARK 465 ALA B 136 REMARK 465 ILE B 137 REMARK 465 GLN B 138 REMARK 465 ALA B 139 REMARK 465 GLU B 140 REMARK 465 THR B 141 REMARK 465 HIS B 142 REMARK 465 GLU B 362 REMARK 465 HIS B 363 REMARK 465 HIS B 364 REMARK 465 HIS B 365 REMARK 465 HIS B 366 REMARK 465 HIS B 367 REMARK 465 HIS B 368 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 168 170.64 -56.37 REMARK 500 ALA A 256 52.36 -141.75 REMARK 500 PRO A 276 -9.56 -56.29 REMARK 500 PHE A 326 -72.80 -96.54 REMARK 500 ALA B 256 54.09 -141.32 REMARK 500 ASN B 264 -169.51 -129.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 599 DISTANCE = 6.22 ANGSTROMS REMARK 525 HOH B 587 DISTANCE = 6.22 ANGSTROMS REMARK 525 HOH B 588 DISTANCE = 6.45 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8RKG RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF TETRAMERIC COLLAGENASE-CLEAVED XENOPUS ZP2- REMARK 900 N2N3 (CLEAVED XZP2-N2N3) REMARK 900 RELATED ID: EMD-19276 RELATED DB: EMDB REMARK 900 CRYO-EM OF TETRAMERIC COLLAGENASE-CLEAVED XENOPUS ZP2-N2N3 (CLEAVED REMARK 900 XZP2-N2N3) (C1) REMARK 900 RELATED ID: EMD-19277 RELATED DB: EMDB REMARK 900 CRYO-EM OF TETRAMERIC COLLAGENASE-CLEAVED XENOPUS ZP2-N2N3 (CLEAVED REMARK 900 XZP2-N2N3) (C2) REMARK 900 RELATED ID: 8RKE RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE COMPLETE N-TERMINAL REGION OF HUMAN ZP2 REMARK 900 (HZP2-N1N2N3) REMARK 900 RELATED ID: 8RKF RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ZP-N1 AND ZP-N2 DOMAINS OF HUMAN ZP2 (HZP2- REMARK 900 N1N2) REMARK 900 RELATED ID: 5II6 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ZP-N1 DOMAIN OF MOUSE SPERM RECEPTOR ZP2 REMARK 900 AT 0.95 A RESOLUTION REMARK 900 RELATED ID: 5BUP RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ZP-C DOMAIN OF MOUSE ZP2 DBREF 8RKH A 135 360 UNP P20239 ZP2_MOUSE 135 360 DBREF 8RKH B 135 360 UNP P20239 ZP2_MOUSE 135 360 SEQADV 8RKH GLU A 132 UNP P20239 EXPRESSION TAG SEQADV 8RKH THR A 133 UNP P20239 EXPRESSION TAG SEQADV 8RKH GLY A 134 UNP P20239 EXPRESSION TAG SEQADV 8RKH LEU A 361 UNP P20239 EXPRESSION TAG SEQADV 8RKH GLU A 362 UNP P20239 EXPRESSION TAG SEQADV 8RKH HIS A 363 UNP P20239 EXPRESSION TAG SEQADV 8RKH HIS A 364 UNP P20239 EXPRESSION TAG SEQADV 8RKH HIS A 365 UNP P20239 EXPRESSION TAG SEQADV 8RKH HIS A 366 UNP P20239 EXPRESSION TAG SEQADV 8RKH HIS A 367 UNP P20239 EXPRESSION TAG SEQADV 8RKH HIS A 368 UNP P20239 EXPRESSION TAG SEQADV 8RKH GLU B 132 UNP P20239 EXPRESSION TAG SEQADV 8RKH THR B 133 UNP P20239 EXPRESSION TAG SEQADV 8RKH GLY B 134 UNP P20239 EXPRESSION TAG SEQADV 8RKH LEU B 361 UNP P20239 EXPRESSION TAG SEQADV 8RKH GLU B 362 UNP P20239 EXPRESSION TAG SEQADV 8RKH HIS B 363 UNP P20239 EXPRESSION TAG SEQADV 8RKH HIS B 364 UNP P20239 EXPRESSION TAG SEQADV 8RKH HIS B 365 UNP P20239 EXPRESSION TAG SEQADV 8RKH HIS B 366 UNP P20239 EXPRESSION TAG SEQADV 8RKH HIS B 367 UNP P20239 EXPRESSION TAG SEQADV 8RKH HIS B 368 UNP P20239 EXPRESSION TAG SEQRES 1 A 237 GLU THR GLY PRO ALA ILE GLN ALA GLU THR HIS GLU ILE SEQRES 2 A 237 SER GLU ILE VAL VAL CYS ARG ARG ASP LEU ILE SER PHE SEQRES 3 A 237 SER PHE PRO GLN LEU PHE SER ARG LEU ALA ASP GLU ASN SEQRES 4 A 237 GLN ASN VAL SER GLU MET GLY TRP ILE VAL LYS ILE GLY SEQRES 5 A 237 ASN GLY THR ARG ALA HIS ILE LEU PRO LEU LYS ASP ALA SEQRES 6 A 237 ILE VAL GLN GLY PHE ASN LEU LEU ILE ASP SER GLN LYS SEQRES 7 A 237 VAL THR LEU HIS VAL PRO ALA ASN ALA THR GLY ILE VAL SEQRES 8 A 237 HIS TYR VAL GLN GLU SER SER TYR LEU TYR THR VAL GLN SEQRES 9 A 237 LEU GLU LEU LEU PHE SER THR THR GLY GLN LYS ILE VAL SEQRES 10 A 237 PHE SER SER HIS ALA ILE CYS ALA PRO ASP LEU SER VAL SEQRES 11 A 237 ALA CYS ASN ALA THR HIS MET THR LEU THR ILE PRO GLU SEQRES 12 A 237 PHE PRO GLY LYS LEU GLU SER VAL ASP PHE GLY GLN TRP SEQRES 13 A 237 SER ILE PRO GLU ASP GLN TRP HIS ALA ASN GLY ILE ASP SEQRES 14 A 237 LYS GLU ALA THR ASN GLY LEU ARG LEU ASN PHE ARG LYS SEQRES 15 A 237 SER LEU LEU LYS THR LYS PRO SER GLU LYS CYS PRO PHE SEQRES 16 A 237 TYR GLN PHE TYR LEU SER SER LEU LYS LEU THR PHE TYR SEQRES 17 A 237 PHE GLN GLY ASN MET LEU SER THR VAL ILE ASP PRO GLU SEQRES 18 A 237 CYS HIS CYS GLU SER PRO VAL SER LEU GLU HIS HIS HIS SEQRES 19 A 237 HIS HIS HIS SEQRES 1 B 237 GLU THR GLY PRO ALA ILE GLN ALA GLU THR HIS GLU ILE SEQRES 2 B 237 SER GLU ILE VAL VAL CYS ARG ARG ASP LEU ILE SER PHE SEQRES 3 B 237 SER PHE PRO GLN LEU PHE SER ARG LEU ALA ASP GLU ASN SEQRES 4 B 237 GLN ASN VAL SER GLU MET GLY TRP ILE VAL LYS ILE GLY SEQRES 5 B 237 ASN GLY THR ARG ALA HIS ILE LEU PRO LEU LYS ASP ALA SEQRES 6 B 237 ILE VAL GLN GLY PHE ASN LEU LEU ILE ASP SER GLN LYS SEQRES 7 B 237 VAL THR LEU HIS VAL PRO ALA ASN ALA THR GLY ILE VAL SEQRES 8 B 237 HIS TYR VAL GLN GLU SER SER TYR LEU TYR THR VAL GLN SEQRES 9 B 237 LEU GLU LEU LEU PHE SER THR THR GLY GLN LYS ILE VAL SEQRES 10 B 237 PHE SER SER HIS ALA ILE CYS ALA PRO ASP LEU SER VAL SEQRES 11 B 237 ALA CYS ASN ALA THR HIS MET THR LEU THR ILE PRO GLU SEQRES 12 B 237 PHE PRO GLY LYS LEU GLU SER VAL ASP PHE GLY GLN TRP SEQRES 13 B 237 SER ILE PRO GLU ASP GLN TRP HIS ALA ASN GLY ILE ASP SEQRES 14 B 237 LYS GLU ALA THR ASN GLY LEU ARG LEU ASN PHE ARG LYS SEQRES 15 B 237 SER LEU LEU LYS THR LYS PRO SER GLU LYS CYS PRO PHE SEQRES 16 B 237 TYR GLN PHE TYR LEU SER SER LEU LYS LEU THR PHE TYR SEQRES 17 B 237 PHE GLN GLY ASN MET LEU SER THR VAL ILE ASP PRO GLU SEQRES 18 B 237 CYS HIS CYS GLU SER PRO VAL SER LEU GLU HIS HIS HIS SEQRES 19 B 237 HIS HIS HIS HET NAG C 1 27 HET NAG C 2 27 HET BMA C 3 20 HET MAN C 4 20 HET MAN C 5 21 HET MAN C 6 21 HET NAG D 1 27 HET NAG D 2 27 HET NAG A 401 28 HET NAG A 402 28 HET NAG A 403 28 HET NAG B 401 28 HET NAG B 402 28 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 9(C8 H15 N O6) FORMUL 3 BMA C6 H12 O6 FORMUL 3 MAN 3(C6 H12 O6) FORMUL 10 HOH *187(H2 O) HELIX 1 AA1 ASN A 184 ALA A 188 5 5 HELIX 2 AA2 LEU A 193 GLN A 199 1 7 HELIX 3 AA3 ASP A 292 ASN A 297 5 6 HELIX 4 AA4 SER A 314 LEU A 316 5 3 HELIX 5 AA5 ASN B 184 ALA B 188 5 5 HELIX 6 AA6 LEU B 193 GLN B 199 1 7 HELIX 7 AA7 ASP B 292 ASN B 297 5 6 HELIX 8 AA8 SER B 314 LEU B 316 5 3 SHEET 1 AA1 4 ILE A 147 CYS A 150 0 SHEET 2 AA1 4 LEU A 154 PRO A 160 -1 O SER A 156 N VAL A 149 SHEET 3 AA1 4 LYS A 209 PRO A 215 -1 O VAL A 210 N PHE A 159 SHEET 4 AA1 4 ASN A 202 ASP A 206 -1 N ASN A 202 O HIS A 213 SHEET 1 AA2 8 HIS A 189 PRO A 192 0 SHEET 2 AA2 8 TRP A 178 ILE A 182 -1 N VAL A 180 O LEU A 191 SHEET 3 AA2 8 SER A 229 SER A 241 -1 O GLU A 237 N LYS A 181 SHEET 4 AA2 8 GLN A 245 CYS A 255 -1 O PHE A 249 N LEU A 238 SHEET 5 AA2 8 GLN B 245 ASP B 258 -1 O LYS B 246 N VAL A 248 SHEET 6 AA2 8 SER B 229 THR B 242 -1 N PHE B 240 O ILE B 247 SHEET 7 AA2 8 MET B 176 ILE B 182 -1 N LYS B 181 O GLU B 237 SHEET 8 AA2 8 HIS B 189 PRO B 192 -1 O HIS B 189 N ILE B 182 SHEET 1 AA3 6 VAL A 222 GLN A 226 0 SHEET 2 AA3 6 SER A 229 SER A 241 -1 O LEU A 231 N TYR A 224 SHEET 3 AA3 6 GLN A 245 CYS A 255 -1 O PHE A 249 N LEU A 238 SHEET 4 AA3 6 GLN B 245 ASP B 258 -1 O LYS B 246 N VAL A 248 SHEET 5 AA3 6 SER B 229 THR B 242 -1 N PHE B 240 O ILE B 247 SHEET 6 AA3 6 VAL B 222 GLN B 226 -1 N TYR B 224 O LEU B 231 SHEET 1 AA4 4 SER A 260 CYS A 263 0 SHEET 2 AA4 4 HIS A 267 ILE A 272 -1 O THR A 269 N ALA A 262 SHEET 3 AA4 4 LEU A 307 ARG A 312 -1 O LEU A 307 N ILE A 272 SHEET 4 AA4 4 ILE A 299 GLU A 302 -1 N GLU A 302 O ARG A 308 SHEET 1 AA5 4 ILE A 289 PRO A 290 0 SHEET 2 AA5 4 GLY A 277 ASP A 283 -1 N VAL A 282 O ILE A 289 SHEET 3 AA5 4 LEU A 334 PHE A 340 -1 O LYS A 335 N ASP A 283 SHEET 4 AA5 4 ASN A 343 ILE A 349 -1 O ASN A 343 N PHE A 340 SHEET 1 AA6 2 LYS A 317 LYS A 319 0 SHEET 2 AA6 2 GLN A 328 TYR A 330 -1 O TYR A 330 N LYS A 317 SHEET 1 AA7 4 ILE B 147 CYS B 150 0 SHEET 2 AA7 4 LEU B 154 PRO B 160 -1 O SER B 156 N VAL B 149 SHEET 3 AA7 4 LYS B 209 PRO B 215 -1 O VAL B 210 N PHE B 159 SHEET 4 AA7 4 ASN B 202 ASP B 206 -1 N LEU B 204 O THR B 211 SHEET 1 AA8 4 SER B 260 CYS B 263 0 SHEET 2 AA8 4 HIS B 267 ILE B 272 -1 O THR B 269 N ALA B 262 SHEET 3 AA8 4 LEU B 307 ARG B 312 -1 O LEU B 309 N LEU B 270 SHEET 4 AA8 4 ILE B 299 GLU B 302 -1 N ASP B 300 O ASN B 310 SHEET 1 AA9 4 SER B 288 PRO B 290 0 SHEET 2 AA9 4 GLY B 277 ASP B 283 -1 N VAL B 282 O ILE B 289 SHEET 3 AA9 4 LEU B 334 PHE B 340 -1 O TYR B 339 N LYS B 278 SHEET 4 AA9 4 ASN B 343 ILE B 349 -1 O LEU B 345 N PHE B 338 SHEET 1 AB1 2 LYS B 317 SER B 321 0 SHEET 2 AB1 2 PHE B 326 TYR B 330 -1 O TYR B 330 N LYS B 317 SSBOND 1 CYS A 150 CYS A 255 1555 1555 2.04 SSBOND 2 CYS A 263 CYS A 353 1555 1555 2.03 SSBOND 3 CYS A 324 CYS A 355 1555 1555 2.03 SSBOND 4 CYS B 150 CYS B 255 1555 1555 2.03 SSBOND 5 CYS B 263 CYS B 353 1555 1555 2.02 SSBOND 6 CYS B 324 CYS B 355 1555 1555 2.04 LINK ND2 ASN A 172 C1 NAG A 401 1555 1555 1.43 LINK ND2 ASN A 184 C1 NAG A 402 1555 1555 1.42 LINK ND2 ASN A 217 C1 NAG A 403 1555 1555 1.44 LINK ND2 ASN A 264 C1 NAG C 1 1555 1555 1.43 LINK ND2 ASN B 184 C1 NAG B 401 1555 1555 1.41 LINK ND2 ASN B 217 C1 NAG B 402 1555 1555 1.39 LINK ND2 ASN B 264 C1 NAG D 1 1555 1555 1.47 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.41 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.45 LINK O6 BMA C 3 C1 MAN C 4 1555 1555 1.51 LINK O3 MAN C 4 C1 MAN C 5 1555 1555 1.49 LINK O6 MAN C 4 C1 MAN C 6 1555 1555 1.50 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.46 CISPEP 1 PRO B 325 PHE B 326 0 -8.76 CRYST1 163.010 54.170 68.660 90.00 107.98 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006135 0.000000 0.001991 0.00000 SCALE2 0.000000 0.018460 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015313 0.00000 MTRIX1 1 -0.347389 0.058858 0.935872 54.55299 1 MTRIX2 1 0.184695 -0.974183 0.129824 66.99293 1 MTRIX3 1 0.919352 0.217950 0.327550 -45.21621 1