data_8RLE # _entry.id 8RLE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.409 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8RLE pdb_00008rle 10.2210/pdb8rle/pdb WWPDB D_1292135660 ? ? EMDB EMD-19340 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-01-15 ? 2 'EM metadata' 1 0 2025-01-15 ? 3 'Additional map' 1 0 2025-01-15 ? 4 FSC 1 0 2025-01-15 ? 5 'Half map' 1 0 2025-01-15 1 6 'Half map' 1 0 2025-01-15 2 7 Image 1 0 2025-01-15 ? 8 Mask 1 0 2025-01-15 ? 9 'Primary map' 1 0 2025-01-15 ? 10 'Structure model' 1 1 2025-12-24 ? 11 'EM metadata' 1 1 2025-12-24 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 'Additional map' repository 'Initial release' ? ? 4 4 FSC repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 'Half map' repository 'Initial release' ? ? 7 7 Image repository 'Initial release' ? ? 8 8 Mask repository 'Initial release' ? ? 9 9 'Primary map' repository 'Initial release' ? ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 10 'Structure model' 'Data collection' 2 10 'Structure model' 'Database references' 3 11 'EM metadata' 'Database references' 4 11 'EM metadata' 'Experimental summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 10 'Structure model' citation 2 10 'Structure model' citation_author 3 10 'Structure model' em_admin 4 11 'EM metadata' citation 5 11 'EM metadata' citation_author 6 11 'EM metadata' em_admin # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 10 'Structure model' '_citation.country' 2 10 'Structure model' '_citation.journal_abbrev' 3 10 'Structure model' '_citation.journal_id_CSD' 4 10 'Structure model' '_citation.journal_id_ISSN' 5 10 'Structure model' '_citation.pdbx_database_id_DOI' 6 10 'Structure model' '_citation.pdbx_database_id_PubMed' 7 10 'Structure model' '_citation.title' 8 10 'Structure model' '_citation.year' 9 10 'Structure model' '_citation_author.identifier_ORCID' 10 10 'Structure model' '_citation_author.name' 11 10 'Structure model' '_em_admin.last_update' 12 11 'EM metadata' '_citation.country' 13 11 'EM metadata' '_citation.journal_abbrev' 14 11 'EM metadata' '_citation.journal_id_CSD' 15 11 'EM metadata' '_citation.journal_id_ISSN' 16 11 'EM metadata' '_citation.pdbx_database_id_DOI' 17 11 'EM metadata' '_citation.pdbx_database_id_PubMed' 18 11 'EM metadata' '_citation.title' 19 11 'EM metadata' '_citation.year' 20 11 'EM metadata' '_citation_author.identifier_ORCID' 21 11 'EM metadata' '_citation_author.name' 22 11 'EM metadata' '_em_admin.last_update' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8RLE _pdbx_database_status.recvd_initial_deposition_date 2024-01-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'SPNS2:sfGFP hetero dimer assembled by Di-Gluebody - sfGFP local refinement' _pdbx_database_related.db_id EMD-19340 _pdbx_database_related.content_type 'associated EM volume' # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 4 robert.gilbert@magd.ox.ac.uk Robert Gilbert J.C. 'principal investigator/group leader' 0000-0001-9336-5604 5 david.sauer@cmd.ox.ac.uk David Sauer B. 'principal investigator/group leader' 0000-0001-9291-4640 6 ben.davis@rfi.ac.uk Benjamin Davis G. 'principal investigator/group leader' 0000-0002-5056-407X 7 frank.vondelft@cmd.ox.ac.uk Frank 'von Delft' ? 'principal investigator/group leader' 0000-0003-0378-0017 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Yi, G.' 1 0009-0004-6509-4893 'Ye, M.' 2 0000-0001-6324-4238 'Mamalis, D.' 3 0000-0002-4396-7495 'Sauer, D.B.' 4 0000-0001-9291-4640 'von Delft, F.' 5 0000-0003-0378-0017 'Davis, B.G.' 6 0000-0002-5056-407X 'Gilbert, R.J.C.' 7 0000-0001-9336-5604 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nat.Chem.Biol. _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1552-4469 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Covalently constrained 'Di-Gembodies' enable parallel structure solutions by cryo-EM. ; _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41589-025-01972-7 _citation.pdbx_database_id_PubMed 40817135 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yi, G.' 1 ? primary 'Mamalis, D.' 2 ? primary 'Ye, M.' 3 0000-0001-6324-4238 primary 'Carrique, L.' 4 0000-0001-5332-8593 primary 'Fairhead, M.' 5 ? primary 'Li, H.' 6 0000-0002-5482-9936 primary 'Duerr, K.L.' 7 ? primary 'Zhang, P.' 8 0000-0003-1803-691X primary 'Sauer, D.B.' 9 0000-0001-9291-4640 primary 'von Delft, F.' 10 0000-0003-0378-0017 primary 'Davis, B.G.' 11 0000-0002-5056-407X primary 'Gilbert, R.J.C.' 12 0000-0001-9336-5604 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Green fluorescent protein' 26819.230 1 ? ? ? ? 2 polymer man 'Gluebody GbEnhancer' 12689.139 1 ? ? ? ? 3 polymer man 'Gluebody GbC4' 12982.609 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MSKGEELFTGVVPILVELDGDVNGHKFSVRGEGEGDATNGKLTLKFICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKR HDFFKSAMPEGYVQERTISFKDDGTYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNFNSHNVYITADKQKNG IKANFKIRHNVEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSVLSKDPNEKRDHMVLLEFVTAAGITHGMDELYK ; ;MSKGEELFTGVVPILVELDGDVNGHKFSVRGEGEGDATNGKLTLKFICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKR HDFFKSAMPEGYVQERTISFKDDGTYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNFNSHNVYITADKQKNG IKANFKIRHNVEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSVLSKDPNEKRDHMVLLEFVTAAGITHGMDELYK ; B ? 2 'polypeptide(L)' no no ;QVQLVENGGACVKPGGSLRLSCAASGFPVNRYSMRWYRQAPGKEREWVAGMSSAGDRSSYEDSVKGRFTISRDDARNTVY LQMNSLKPEDTAVYYCNVNVGFEYWGQGTQVMVS ; ;QVQLVENGGACVKPGGSLRLSCAASGFPVNRYSMRWYRQAPGKEREWVAGMSSAGDRSSYEDSVKGRFTISRDDARNTVY LQMNSLKPEDTAVYYCNVNVGFEYWGQGTQVMVS ; D ? 3 'polypeptide(L)' no no ;SQGQLVENGGGCVKAGGSLRLSCAASQGTLSNLVTGWFRRAPGKEREFVANIGRDGLTVYSNSVKGRFTISRDRAKNTVY LQMDSLKPEDTAVYYCAGRLSRFPGEYDYWSKGTPVMVS ; ;SQGQLVENGGGCVKAGGSLRLSCAASQGTLSNLVTGWFRRAPGKEREFVANIGRDGLTVYSNSVKGRFTISRDRAKNTVY LQMDSLKPEDTAVYYCAGRLSRFPGEYDYWSKGTPVMVS ; C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 LYS n 1 4 GLY n 1 5 GLU n 1 6 GLU n 1 7 LEU n 1 8 PHE n 1 9 THR n 1 10 GLY n 1 11 VAL n 1 12 VAL n 1 13 PRO n 1 14 ILE n 1 15 LEU n 1 16 VAL n 1 17 GLU n 1 18 LEU n 1 19 ASP n 1 20 GLY n 1 21 ASP n 1 22 VAL n 1 23 ASN n 1 24 GLY n 1 25 HIS n 1 26 LYS n 1 27 PHE n 1 28 SER n 1 29 VAL n 1 30 ARG n 1 31 GLY n 1 32 GLU n 1 33 GLY n 1 34 GLU n 1 35 GLY n 1 36 ASP n 1 37 ALA n 1 38 THR n 1 39 ASN n 1 40 GLY n 1 41 LYS n 1 42 LEU n 1 43 THR n 1 44 LEU n 1 45 LYS n 1 46 PHE n 1 47 ILE n 1 48 CYS n 1 49 THR n 1 50 THR n 1 51 GLY n 1 52 LYS n 1 53 LEU n 1 54 PRO n 1 55 VAL n 1 56 PRO n 1 57 TRP n 1 58 PRO n 1 59 THR n 1 60 LEU n 1 61 VAL n 1 62 THR n 1 63 THR n 1 64 LEU n 1 65 THR n 1 66 TYR n 1 67 GLY n 1 68 VAL n 1 69 GLN n 1 70 CYS n 1 71 PHE n 1 72 SER n 1 73 ARG n 1 74 TYR n 1 75 PRO n 1 76 ASP n 1 77 HIS n 1 78 MET n 1 79 LYS n 1 80 ARG n 1 81 HIS n 1 82 ASP n 1 83 PHE n 1 84 PHE n 1 85 LYS n 1 86 SER n 1 87 ALA n 1 88 MET n 1 89 PRO n 1 90 GLU n 1 91 GLY n 1 92 TYR n 1 93 VAL n 1 94 GLN n 1 95 GLU n 1 96 ARG n 1 97 THR n 1 98 ILE n 1 99 SER n 1 100 PHE n 1 101 LYS n 1 102 ASP n 1 103 ASP n 1 104 GLY n 1 105 THR n 1 106 TYR n 1 107 LYS n 1 108 THR n 1 109 ARG n 1 110 ALA n 1 111 GLU n 1 112 VAL n 1 113 LYS n 1 114 PHE n 1 115 GLU n 1 116 GLY n 1 117 ASP n 1 118 THR n 1 119 LEU n 1 120 VAL n 1 121 ASN n 1 122 ARG n 1 123 ILE n 1 124 GLU n 1 125 LEU n 1 126 LYS n 1 127 GLY n 1 128 ILE n 1 129 ASP n 1 130 PHE n 1 131 LYS n 1 132 GLU n 1 133 ASP n 1 134 GLY n 1 135 ASN n 1 136 ILE n 1 137 LEU n 1 138 GLY n 1 139 HIS n 1 140 LYS n 1 141 LEU n 1 142 GLU n 1 143 TYR n 1 144 ASN n 1 145 PHE n 1 146 ASN n 1 147 SER n 1 148 HIS n 1 149 ASN n 1 150 VAL n 1 151 TYR n 1 152 ILE n 1 153 THR n 1 154 ALA n 1 155 ASP n 1 156 LYS n 1 157 GLN n 1 158 LYS n 1 159 ASN n 1 160 GLY n 1 161 ILE n 1 162 LYS n 1 163 ALA n 1 164 ASN n 1 165 PHE n 1 166 LYS n 1 167 ILE n 1 168 ARG n 1 169 HIS n 1 170 ASN n 1 171 VAL n 1 172 GLU n 1 173 ASP n 1 174 GLY n 1 175 SER n 1 176 VAL n 1 177 GLN n 1 178 LEU n 1 179 ALA n 1 180 ASP n 1 181 HIS n 1 182 TYR n 1 183 GLN n 1 184 GLN n 1 185 ASN n 1 186 THR n 1 187 PRO n 1 188 ILE n 1 189 GLY n 1 190 ASP n 1 191 GLY n 1 192 PRO n 1 193 VAL n 1 194 LEU n 1 195 LEU n 1 196 PRO n 1 197 ASP n 1 198 ASN n 1 199 HIS n 1 200 TYR n 1 201 LEU n 1 202 SER n 1 203 THR n 1 204 GLN n 1 205 SER n 1 206 VAL n 1 207 LEU n 1 208 SER n 1 209 LYS n 1 210 ASP n 1 211 PRO n 1 212 ASN n 1 213 GLU n 1 214 LYS n 1 215 ARG n 1 216 ASP n 1 217 HIS n 1 218 MET n 1 219 VAL n 1 220 LEU n 1 221 LEU n 1 222 GLU n 1 223 PHE n 1 224 VAL n 1 225 THR n 1 226 ALA n 1 227 ALA n 1 228 GLY n 1 229 ILE n 1 230 THR n 1 231 HIS n 1 232 GLY n 1 233 MET n 1 234 ASP n 1 235 GLU n 1 236 LEU n 1 237 TYR n 1 238 LYS n 2 1 GLN n 2 2 VAL n 2 3 GLN n 2 4 LEU n 2 5 VAL n 2 6 GLU n 2 7 ASN n 2 8 GLY n 2 9 GLY n 2 10 ALA n 2 11 CYS n 2 12 VAL n 2 13 LYS n 2 14 PRO n 2 15 GLY n 2 16 GLY n 2 17 SER n 2 18 LEU n 2 19 ARG n 2 20 LEU n 2 21 SER n 2 22 CYS n 2 23 ALA n 2 24 ALA n 2 25 SER n 2 26 GLY n 2 27 PHE n 2 28 PRO n 2 29 VAL n 2 30 ASN n 2 31 ARG n 2 32 TYR n 2 33 SER n 2 34 MET n 2 35 ARG n 2 36 TRP n 2 37 TYR n 2 38 ARG n 2 39 GLN n 2 40 ALA n 2 41 PRO n 2 42 GLY n 2 43 LYS n 2 44 GLU n 2 45 ARG n 2 46 GLU n 2 47 TRP n 2 48 VAL n 2 49 ALA n 2 50 GLY n 2 51 MET n 2 52 SER n 2 53 SER n 2 54 ALA n 2 55 GLY n 2 56 ASP n 2 57 ARG n 2 58 SER n 2 59 SER n 2 60 TYR n 2 61 GLU n 2 62 ASP n 2 63 SER n 2 64 VAL n 2 65 LYS n 2 66 GLY n 2 67 ARG n 2 68 PHE n 2 69 THR n 2 70 ILE n 2 71 SER n 2 72 ARG n 2 73 ASP n 2 74 ASP n 2 75 ALA n 2 76 ARG n 2 77 ASN n 2 78 THR n 2 79 VAL n 2 80 TYR n 2 81 LEU n 2 82 GLN n 2 83 MET n 2 84 ASN n 2 85 SER n 2 86 LEU n 2 87 LYS n 2 88 PRO n 2 89 GLU n 2 90 ASP n 2 91 THR n 2 92 ALA n 2 93 VAL n 2 94 TYR n 2 95 TYR n 2 96 CYS n 2 97 ASN n 2 98 VAL n 2 99 ASN n 2 100 VAL n 2 101 GLY n 2 102 PHE n 2 103 GLU n 2 104 TYR n 2 105 TRP n 2 106 GLY n 2 107 GLN n 2 108 GLY n 2 109 THR n 2 110 GLN n 2 111 VAL n 2 112 MET n 2 113 VAL n 2 114 SER n 3 1 SER n 3 2 GLN n 3 3 GLY n 3 4 GLN n 3 5 LEU n 3 6 VAL n 3 7 GLU n 3 8 ASN n 3 9 GLY n 3 10 GLY n 3 11 GLY n 3 12 CYS n 3 13 VAL n 3 14 LYS n 3 15 ALA n 3 16 GLY n 3 17 GLY n 3 18 SER n 3 19 LEU n 3 20 ARG n 3 21 LEU n 3 22 SER n 3 23 CYS n 3 24 ALA n 3 25 ALA n 3 26 SER n 3 27 GLN n 3 28 GLY n 3 29 THR n 3 30 LEU n 3 31 SER n 3 32 ASN n 3 33 LEU n 3 34 VAL n 3 35 THR n 3 36 GLY n 3 37 TRP n 3 38 PHE n 3 39 ARG n 3 40 ARG n 3 41 ALA n 3 42 PRO n 3 43 GLY n 3 44 LYS n 3 45 GLU n 3 46 ARG n 3 47 GLU n 3 48 PHE n 3 49 VAL n 3 50 ALA n 3 51 ASN n 3 52 ILE n 3 53 GLY n 3 54 ARG n 3 55 ASP n 3 56 GLY n 3 57 LEU n 3 58 THR n 3 59 VAL n 3 60 TYR n 3 61 SER n 3 62 ASN n 3 63 SER n 3 64 VAL n 3 65 LYS n 3 66 GLY n 3 67 ARG n 3 68 PHE n 3 69 THR n 3 70 ILE n 3 71 SER n 3 72 ARG n 3 73 ASP n 3 74 ARG n 3 75 ALA n 3 76 LYS n 3 77 ASN n 3 78 THR n 3 79 VAL n 3 80 TYR n 3 81 LEU n 3 82 GLN n 3 83 MET n 3 84 ASP n 3 85 SER n 3 86 LEU n 3 87 LYS n 3 88 PRO n 3 89 GLU n 3 90 ASP n 3 91 THR n 3 92 ALA n 3 93 VAL n 3 94 TYR n 3 95 TYR n 3 96 CYS n 3 97 ALA n 3 98 GLY n 3 99 ARG n 3 100 LEU n 3 101 SER n 3 102 ARG n 3 103 PHE n 3 104 PRO n 3 105 GLY n 3 106 GLU n 3 107 TYR n 3 108 ASP n 3 109 TYR n 3 110 TRP n 3 111 SER n 3 112 LYS n 3 113 GLY n 3 114 THR n 3 115 PRO n 3 116 VAL n 3 117 MET n 3 118 VAL n 3 119 SER n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 238 ? ? gfp ? ? ? ? ? ? 'Aequorea victoria' 6100 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 114 ? ? ? ? ? ? ? ? ? 'Lama glama' 9844 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 119 ? ? ? ? ? ? ? ? ? 'Lama glama' 9844 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? B . n A 1 2 SER 2 2 ? ? ? B . n A 1 3 LYS 3 3 ? ? ? B . n A 1 4 GLY 4 4 ? ? ? B . n A 1 5 GLU 5 5 ? ? ? B . n A 1 6 GLU 6 6 ? ? ? B . n A 1 7 LEU 7 7 ? ? ? B . n A 1 8 PHE 8 8 8 PHE PHE B . n A 1 9 THR 9 9 9 THR THR B . n A 1 10 GLY 10 10 10 GLY GLY B . n A 1 11 VAL 11 11 11 VAL VAL B . n A 1 12 VAL 12 12 12 VAL VAL B . n A 1 13 PRO 13 13 13 PRO PRO B . n A 1 14 ILE 14 14 14 ILE ILE B . n A 1 15 LEU 15 15 15 LEU LEU B . n A 1 16 VAL 16 16 16 VAL VAL B . n A 1 17 GLU 17 17 17 GLU GLU B . n A 1 18 LEU 18 18 18 LEU LEU B . n A 1 19 ASP 19 19 19 ASP ASP B . n A 1 20 GLY 20 20 20 GLY GLY B . n A 1 21 ASP 21 21 21 ASP ASP B . n A 1 22 VAL 22 22 22 VAL VAL B . n A 1 23 ASN 23 23 23 ASN ASN B . n A 1 24 GLY 24 24 24 GLY GLY B . n A 1 25 HIS 25 25 25 HIS HIS B . n A 1 26 LYS 26 26 26 LYS LYS B . n A 1 27 PHE 27 27 27 PHE PHE B . n A 1 28 SER 28 28 28 SER SER B . n A 1 29 VAL 29 29 29 VAL VAL B . n A 1 30 ARG 30 30 30 ARG ARG B . n A 1 31 GLY 31 31 31 GLY GLY B . n A 1 32 GLU 32 32 32 GLU GLU B . n A 1 33 GLY 33 33 33 GLY GLY B . n A 1 34 GLU 34 34 34 GLU GLU B . n A 1 35 GLY 35 35 35 GLY GLY B . n A 1 36 ASP 36 36 36 ASP ASP B . n A 1 37 ALA 37 37 37 ALA ALA B . n A 1 38 THR 38 38 38 THR THR B . n A 1 39 ASN 39 39 39 ASN ASN B . n A 1 40 GLY 40 40 40 GLY GLY B . n A 1 41 LYS 41 41 41 LYS LYS B . n A 1 42 LEU 42 42 42 LEU LEU B . n A 1 43 THR 43 43 43 THR THR B . n A 1 44 LEU 44 44 44 LEU LEU B . n A 1 45 LYS 45 45 45 LYS LYS B . n A 1 46 PHE 46 46 46 PHE PHE B . n A 1 47 ILE 47 47 47 ILE ILE B . n A 1 48 CYS 48 48 48 CYS CYS B . n A 1 49 THR 49 49 49 THR THR B . n A 1 50 THR 50 50 50 THR THR B . n A 1 51 GLY 51 51 51 GLY GLY B . n A 1 52 LYS 52 52 52 LYS LYS B . n A 1 53 LEU 53 53 53 LEU LEU B . n A 1 54 PRO 54 54 54 PRO PRO B . n A 1 55 VAL 55 55 55 VAL VAL B . n A 1 56 PRO 56 56 56 PRO PRO B . n A 1 57 TRP 57 57 57 TRP TRP B . n A 1 58 PRO 58 58 58 PRO PRO B . n A 1 59 THR 59 59 59 THR THR B . n A 1 60 LEU 60 60 60 LEU LEU B . n A 1 61 VAL 61 61 61 VAL VAL B . n A 1 62 THR 62 62 62 THR THR B . n A 1 63 THR 63 63 63 THR THR B . n A 1 64 LEU 64 64 64 LEU LEU B . n A 1 65 THR 65 65 65 THR THR B . n A 1 66 TYR 66 66 66 TYR TYR B . n A 1 67 GLY 67 67 67 GLY GLY B . n A 1 68 VAL 68 68 68 VAL VAL B . n A 1 69 GLN 69 69 69 GLN GLN B . n A 1 70 CYS 70 70 70 CYS CYS B . n A 1 71 PHE 71 71 71 PHE PHE B . n A 1 72 SER 72 72 72 SER SER B . n A 1 73 ARG 73 73 73 ARG ARG B . n A 1 74 TYR 74 74 74 TYR TYR B . n A 1 75 PRO 75 75 75 PRO PRO B . n A 1 76 ASP 76 76 76 ASP ASP B . n A 1 77 HIS 77 77 77 HIS HIS B . n A 1 78 MET 78 78 78 MET MET B . n A 1 79 LYS 79 79 79 LYS LYS B . n A 1 80 ARG 80 80 80 ARG ARG B . n A 1 81 HIS 81 81 81 HIS HIS B . n A 1 82 ASP 82 82 82 ASP ASP B . n A 1 83 PHE 83 83 83 PHE PHE B . n A 1 84 PHE 84 84 84 PHE PHE B . n A 1 85 LYS 85 85 85 LYS LYS B . n A 1 86 SER 86 86 86 SER SER B . n A 1 87 ALA 87 87 87 ALA ALA B . n A 1 88 MET 88 88 88 MET MET B . n A 1 89 PRO 89 89 89 PRO PRO B . n A 1 90 GLU 90 90 90 GLU GLU B . n A 1 91 GLY 91 91 91 GLY GLY B . n A 1 92 TYR 92 92 92 TYR TYR B . n A 1 93 VAL 93 93 93 VAL VAL B . n A 1 94 GLN 94 94 94 GLN GLN B . n A 1 95 GLU 95 95 95 GLU GLU B . n A 1 96 ARG 96 96 96 ARG ARG B . n A 1 97 THR 97 97 97 THR THR B . n A 1 98 ILE 98 98 98 ILE ILE B . n A 1 99 SER 99 99 99 SER SER B . n A 1 100 PHE 100 100 100 PHE PHE B . n A 1 101 LYS 101 101 101 LYS LYS B . n A 1 102 ASP 102 102 102 ASP ASP B . n A 1 103 ASP 103 103 103 ASP ASP B . n A 1 104 GLY 104 104 104 GLY GLY B . n A 1 105 THR 105 105 105 THR THR B . n A 1 106 TYR 106 106 106 TYR TYR B . n A 1 107 LYS 107 107 107 LYS LYS B . n A 1 108 THR 108 108 108 THR THR B . n A 1 109 ARG 109 109 109 ARG ARG B . n A 1 110 ALA 110 110 110 ALA ALA B . n A 1 111 GLU 111 111 111 GLU GLU B . n A 1 112 VAL 112 112 112 VAL VAL B . n A 1 113 LYS 113 113 113 LYS LYS B . n A 1 114 PHE 114 114 114 PHE PHE B . n A 1 115 GLU 115 115 115 GLU GLU B . n A 1 116 GLY 116 116 116 GLY GLY B . n A 1 117 ASP 117 117 117 ASP ASP B . n A 1 118 THR 118 118 118 THR THR B . n A 1 119 LEU 119 119 119 LEU LEU B . n A 1 120 VAL 120 120 120 VAL VAL B . n A 1 121 ASN 121 121 121 ASN ASN B . n A 1 122 ARG 122 122 122 ARG ARG B . n A 1 123 ILE 123 123 123 ILE ILE B . n A 1 124 GLU 124 124 124 GLU GLU B . n A 1 125 LEU 125 125 125 LEU LEU B . n A 1 126 LYS 126 126 126 LYS LYS B . n A 1 127 GLY 127 127 127 GLY GLY B . n A 1 128 ILE 128 128 128 ILE ILE B . n A 1 129 ASP 129 129 129 ASP ASP B . n A 1 130 PHE 130 130 130 PHE PHE B . n A 1 131 LYS 131 131 131 LYS LYS B . n A 1 132 GLU 132 132 132 GLU GLU B . n A 1 133 ASP 133 133 133 ASP ASP B . n A 1 134 GLY 134 134 134 GLY GLY B . n A 1 135 ASN 135 135 135 ASN ASN B . n A 1 136 ILE 136 136 136 ILE ILE B . n A 1 137 LEU 137 137 137 LEU LEU B . n A 1 138 GLY 138 138 138 GLY GLY B . n A 1 139 HIS 139 139 139 HIS HIS B . n A 1 140 LYS 140 140 140 LYS LYS B . n A 1 141 LEU 141 141 141 LEU LEU B . n A 1 142 GLU 142 142 142 GLU GLU B . n A 1 143 TYR 143 143 143 TYR TYR B . n A 1 144 ASN 144 144 144 ASN ASN B . n A 1 145 PHE 145 145 145 PHE PHE B . n A 1 146 ASN 146 146 146 ASN ASN B . n A 1 147 SER 147 147 147 SER SER B . n A 1 148 HIS 148 148 148 HIS HIS B . n A 1 149 ASN 149 149 149 ASN ASN B . n A 1 150 VAL 150 150 150 VAL VAL B . n A 1 151 TYR 151 151 151 TYR TYR B . n A 1 152 ILE 152 152 152 ILE ILE B . n A 1 153 THR 153 153 153 THR THR B . n A 1 154 ALA 154 154 154 ALA ALA B . n A 1 155 ASP 155 155 155 ASP ASP B . n A 1 156 LYS 156 156 156 LYS LYS B . n A 1 157 GLN 157 157 157 GLN GLN B . n A 1 158 LYS 158 158 158 LYS LYS B . n A 1 159 ASN 159 159 159 ASN ASN B . n A 1 160 GLY 160 160 160 GLY GLY B . n A 1 161 ILE 161 161 161 ILE ILE B . n A 1 162 LYS 162 162 162 LYS LYS B . n A 1 163 ALA 163 163 163 ALA ALA B . n A 1 164 ASN 164 164 164 ASN ASN B . n A 1 165 PHE 165 165 165 PHE PHE B . n A 1 166 LYS 166 166 166 LYS LYS B . n A 1 167 ILE 167 167 167 ILE ILE B . n A 1 168 ARG 168 168 168 ARG ARG B . n A 1 169 HIS 169 169 169 HIS HIS B . n A 1 170 ASN 170 170 170 ASN ASN B . n A 1 171 VAL 171 171 171 VAL VAL B . n A 1 172 GLU 172 172 172 GLU GLU B . n A 1 173 ASP 173 173 173 ASP ASP B . n A 1 174 GLY 174 174 174 GLY GLY B . n A 1 175 SER 175 175 175 SER SER B . n A 1 176 VAL 176 176 176 VAL VAL B . n A 1 177 GLN 177 177 177 GLN GLN B . n A 1 178 LEU 178 178 178 LEU LEU B . n A 1 179 ALA 179 179 179 ALA ALA B . n A 1 180 ASP 180 180 180 ASP ASP B . n A 1 181 HIS 181 181 181 HIS HIS B . n A 1 182 TYR 182 182 182 TYR TYR B . n A 1 183 GLN 183 183 183 GLN GLN B . n A 1 184 GLN 184 184 184 GLN GLN B . n A 1 185 ASN 185 185 185 ASN ASN B . n A 1 186 THR 186 186 186 THR THR B . n A 1 187 PRO 187 187 187 PRO PRO B . n A 1 188 ILE 188 188 188 ILE ILE B . n A 1 189 GLY 189 189 189 GLY GLY B . n A 1 190 ASP 190 190 190 ASP ASP B . n A 1 191 GLY 191 191 191 GLY GLY B . n A 1 192 PRO 192 192 192 PRO PRO B . n A 1 193 VAL 193 193 193 VAL VAL B . n A 1 194 LEU 194 194 194 LEU LEU B . n A 1 195 LEU 195 195 195 LEU LEU B . n A 1 196 PRO 196 196 196 PRO PRO B . n A 1 197 ASP 197 197 197 ASP ASP B . n A 1 198 ASN 198 198 198 ASN ASN B . n A 1 199 HIS 199 199 199 HIS HIS B . n A 1 200 TYR 200 200 200 TYR TYR B . n A 1 201 LEU 201 201 201 LEU LEU B . n A 1 202 SER 202 202 202 SER SER B . n A 1 203 THR 203 203 203 THR THR B . n A 1 204 GLN 204 204 204 GLN GLN B . n A 1 205 SER 205 205 205 SER SER B . n A 1 206 VAL 206 206 206 VAL VAL B . n A 1 207 LEU 207 207 207 LEU LEU B . n A 1 208 SER 208 208 208 SER SER B . n A 1 209 LYS 209 209 209 LYS LYS B . n A 1 210 ASP 210 210 210 ASP ASP B . n A 1 211 PRO 211 211 211 PRO PRO B . n A 1 212 ASN 212 212 212 ASN ASN B . n A 1 213 GLU 213 213 213 GLU GLU B . n A 1 214 LYS 214 214 214 LYS LYS B . n A 1 215 ARG 215 215 215 ARG ARG B . n A 1 216 ASP 216 216 216 ASP ASP B . n A 1 217 HIS 217 217 217 HIS HIS B . n A 1 218 MET 218 218 218 MET MET B . n A 1 219 VAL 219 219 219 VAL VAL B . n A 1 220 LEU 220 220 220 LEU LEU B . n A 1 221 LEU 221 221 221 LEU LEU B . n A 1 222 GLU 222 222 222 GLU GLU B . n A 1 223 PHE 223 223 223 PHE PHE B . n A 1 224 VAL 224 224 224 VAL VAL B . n A 1 225 THR 225 225 225 THR THR B . n A 1 226 ALA 226 226 226 ALA ALA B . n A 1 227 ALA 227 227 227 ALA ALA B . n A 1 228 GLY 228 228 ? ? ? B . n A 1 229 ILE 229 229 ? ? ? B . n A 1 230 THR 230 230 ? ? ? B . n A 1 231 HIS 231 231 ? ? ? B . n A 1 232 GLY 232 232 ? ? ? B . n A 1 233 MET 233 233 ? ? ? B . n A 1 234 ASP 234 234 ? ? ? B . n A 1 235 GLU 235 235 ? ? ? B . n A 1 236 LEU 236 236 ? ? ? B . n A 1 237 TYR 237 237 ? ? ? B . n A 1 238 LYS 238 238 ? ? ? B . n B 2 1 GLN 1 1 1 GLN GLN D . n B 2 2 VAL 2 2 2 VAL VAL D . n B 2 3 GLN 3 3 3 GLN GLN D . n B 2 4 LEU 4 4 4 LEU LEU D . n B 2 5 VAL 5 5 5 VAL VAL D . n B 2 6 GLU 6 6 6 GLU GLU D . n B 2 7 ASN 7 7 7 ASN ASN D . n B 2 8 GLY 8 8 8 GLY GLY D . n B 2 9 GLY 9 9 9 GLY GLY D . n B 2 10 ALA 10 10 10 ALA ALA D . n B 2 11 CYS 11 11 11 CYS CYS D . n B 2 12 VAL 12 12 12 VAL VAL D . n B 2 13 LYS 13 13 13 LYS LYS D . n B 2 14 PRO 14 14 14 PRO PRO D . n B 2 15 GLY 15 15 15 GLY GLY D . n B 2 16 GLY 16 16 16 GLY GLY D . n B 2 17 SER 17 17 17 SER SER D . n B 2 18 LEU 18 18 18 LEU LEU D . n B 2 19 ARG 19 19 19 ARG ARG D . n B 2 20 LEU 20 20 20 LEU LEU D . n B 2 21 SER 21 21 21 SER SER D . n B 2 22 CYS 22 22 22 CYS CYS D . n B 2 23 ALA 23 23 23 ALA ALA D . n B 2 24 ALA 24 24 24 ALA ALA D . n B 2 25 SER 25 25 25 SER SER D . n B 2 26 GLY 26 26 26 GLY GLY D . n B 2 27 PHE 27 27 27 PHE PHE D . n B 2 28 PRO 28 28 28 PRO PRO D . n B 2 29 VAL 29 29 29 VAL VAL D . n B 2 30 ASN 30 30 30 ASN ASN D . n B 2 31 ARG 31 31 31 ARG ARG D . n B 2 32 TYR 32 32 32 TYR TYR D . n B 2 33 SER 33 33 33 SER SER D . n B 2 34 MET 34 34 34 MET MET D . n B 2 35 ARG 35 35 35 ARG ARG D . n B 2 36 TRP 36 36 36 TRP TRP D . n B 2 37 TYR 37 37 37 TYR TYR D . n B 2 38 ARG 38 38 38 ARG ARG D . n B 2 39 GLN 39 39 39 GLN GLN D . n B 2 40 ALA 40 40 40 ALA ALA D . n B 2 41 PRO 41 41 41 PRO PRO D . n B 2 42 GLY 42 42 42 GLY GLY D . n B 2 43 LYS 43 43 43 LYS LYS D . n B 2 44 GLU 44 44 44 GLU GLU D . n B 2 45 ARG 45 45 45 ARG ARG D . n B 2 46 GLU 46 46 46 GLU GLU D . n B 2 47 TRP 47 47 47 TRP TRP D . n B 2 48 VAL 48 48 48 VAL VAL D . n B 2 49 ALA 49 49 49 ALA ALA D . n B 2 50 GLY 50 50 50 GLY GLY D . n B 2 51 MET 51 51 51 MET MET D . n B 2 52 SER 52 52 52 SER SER D . n B 2 53 SER 53 52 52 SER SER D A n B 2 54 ALA 54 53 53 ALA ALA D . n B 2 55 GLY 55 54 54 GLY GLY D . n B 2 56 ASP 56 55 55 ASP ASP D . n B 2 57 ARG 57 56 56 ARG ARG D . n B 2 58 SER 58 57 57 SER SER D . n B 2 59 SER 59 58 58 SER SER D . n B 2 60 TYR 60 59 59 TYR TYR D . n B 2 61 GLU 61 60 60 GLU GLU D . n B 2 62 ASP 62 61 61 ASP ASP D . n B 2 63 SER 63 62 62 SER SER D . n B 2 64 VAL 64 63 63 VAL VAL D . n B 2 65 LYS 65 64 64 LYS LYS D . n B 2 66 GLY 66 65 65 GLY GLY D . n B 2 67 ARG 67 66 66 ARG ARG D . n B 2 68 PHE 68 67 67 PHE PHE D . n B 2 69 THR 69 68 68 THR THR D . n B 2 70 ILE 70 69 69 ILE ILE D . n B 2 71 SER 71 70 70 SER SER D . n B 2 72 ARG 72 71 71 ARG ARG D . n B 2 73 ASP 73 72 72 ASP ASP D . n B 2 74 ASP 74 73 73 ASP ASP D . n B 2 75 ALA 75 74 74 ALA ALA D . n B 2 76 ARG 76 75 75 ARG ARG D . n B 2 77 ASN 77 76 76 ASN ASN D . n B 2 78 THR 78 77 77 THR THR D . n B 2 79 VAL 79 78 78 VAL VAL D . n B 2 80 TYR 80 79 79 TYR TYR D . n B 2 81 LEU 81 80 80 LEU LEU D . n B 2 82 GLN 82 81 81 GLN GLN D . n B 2 83 MET 83 82 82 MET MET D . n B 2 84 ASN 84 82 82 ASN ASN D A n B 2 85 SER 85 82 82 SER SER D B n B 2 86 LEU 86 82 82 LEU LEU D C n B 2 87 LYS 87 83 83 LYS LYS D . n B 2 88 PRO 88 84 84 PRO PRO D . n B 2 89 GLU 89 85 85 GLU GLU D . n B 2 90 ASP 90 86 86 ASP ASP D . n B 2 91 THR 91 87 87 THR THR D . n B 2 92 ALA 92 88 88 ALA ALA D . n B 2 93 VAL 93 89 89 VAL VAL D . n B 2 94 TYR 94 90 90 TYR TYR D . n B 2 95 TYR 95 91 91 TYR TYR D . n B 2 96 CYS 96 92 92 CYS CYS D . n B 2 97 ASN 97 93 93 ASN ASN D . n B 2 98 VAL 98 94 94 VAL VAL D . n B 2 99 ASN 99 95 95 ASN ASN D . n B 2 100 VAL 100 96 96 VAL VAL D . n B 2 101 GLY 101 97 97 GLY GLY D . n B 2 102 PHE 102 98 98 PHE PHE D . n B 2 103 GLU 103 99 99 GLU GLU D . n B 2 104 TYR 104 100 100 TYR TYR D . n B 2 105 TRP 105 101 101 TRP TRP D . n B 2 106 GLY 106 102 102 GLY GLY D . n B 2 107 GLN 107 103 103 GLN GLN D . n B 2 108 GLY 108 104 104 GLY GLY D . n B 2 109 THR 109 105 105 THR THR D . n B 2 110 GLN 110 106 106 GLN GLN D . n B 2 111 VAL 111 107 107 VAL VAL D . n B 2 112 MET 112 108 108 MET MET D . n B 2 113 VAL 113 109 109 VAL VAL D . n B 2 114 SER 114 110 110 SER SER D . n C 3 1 SER 1 0 ? ? ? C . n C 3 2 GLN 2 1 ? ? ? C . n C 3 3 GLY 3 2 ? ? ? C . n C 3 4 GLN 4 3 3 GLN GLN C . n C 3 5 LEU 5 4 4 LEU LEU C . n C 3 6 VAL 6 5 5 VAL VAL C . n C 3 7 GLU 7 6 6 GLU GLU C . n C 3 8 ASN 8 7 7 ASN ASN C . n C 3 9 GLY 9 8 8 GLY GLY C . n C 3 10 GLY 10 9 9 GLY GLY C . n C 3 11 GLY 11 10 10 GLY GLY C . n C 3 12 CYS 12 11 11 CYS CYS C . n C 3 13 VAL 13 12 12 VAL VAL C . n C 3 14 LYS 14 13 13 LYS LYS C . n C 3 15 ALA 15 14 14 ALA ALA C . n C 3 16 GLY 16 15 15 GLY GLY C . n C 3 17 GLY 17 16 16 GLY GLY C . n C 3 18 SER 18 17 17 SER SER C . n C 3 19 LEU 19 18 18 LEU LEU C . n C 3 20 ARG 20 19 19 ARG ARG C . n C 3 21 LEU 21 20 20 LEU LEU C . n C 3 22 SER 22 21 21 SER SER C . n C 3 23 CYS 23 22 22 CYS CYS C . n C 3 24 ALA 24 23 23 ALA ALA C . n C 3 25 ALA 25 24 24 ALA ALA C . n C 3 26 SER 26 25 25 SER SER C . n C 3 27 GLN 27 26 26 GLN GLN C . n C 3 28 GLY 28 27 27 GLY GLY C . n C 3 29 THR 29 28 28 THR THR C . n C 3 30 LEU 30 29 29 LEU LEU C . n C 3 31 SER 31 30 30 SER SER C . n C 3 32 ASN 32 31 31 ASN ASN C . n C 3 33 LEU 33 32 32 LEU LEU C . n C 3 34 VAL 34 33 33 VAL VAL C . n C 3 35 THR 35 34 34 THR THR C . n C 3 36 GLY 36 35 35 GLY GLY C . n C 3 37 TRP 37 36 36 TRP TRP C . n C 3 38 PHE 38 37 37 PHE PHE C . n C 3 39 ARG 39 38 38 ARG ARG C . n C 3 40 ARG 40 39 39 ARG ARG C . n C 3 41 ALA 41 40 40 ALA ALA C . n C 3 42 PRO 42 41 41 PRO PRO C . n C 3 43 GLY 43 42 42 GLY GLY C . n C 3 44 LYS 44 43 43 LYS LYS C . n C 3 45 GLU 45 44 44 GLU GLU C . n C 3 46 ARG 46 45 45 ARG ARG C . n C 3 47 GLU 47 46 46 GLU GLU C . n C 3 48 PHE 48 47 47 PHE PHE C . n C 3 49 VAL 49 48 48 VAL VAL C . n C 3 50 ALA 50 49 49 ALA ALA C . n C 3 51 ASN 51 50 50 ASN ASN C . n C 3 52 ILE 52 51 51 ILE ILE C . n C 3 53 GLY 53 52 52 GLY GLY C . n C 3 54 ARG 54 53 53 ARG ARG C . n C 3 55 ASP 55 54 54 ASP ASP C . n C 3 56 GLY 56 55 55 GLY GLY C . n C 3 57 LEU 57 56 56 LEU LEU C . n C 3 58 THR 58 57 57 THR THR C . n C 3 59 VAL 59 58 58 VAL VAL C . n C 3 60 TYR 60 59 59 TYR TYR C . n C 3 61 SER 61 60 60 SER SER C . n C 3 62 ASN 62 61 61 ASN ASN C . n C 3 63 SER 63 62 62 SER SER C . n C 3 64 VAL 64 63 63 VAL VAL C . n C 3 65 LYS 65 64 64 LYS LYS C . n C 3 66 GLY 66 65 65 GLY GLY C . n C 3 67 ARG 67 66 66 ARG ARG C . n C 3 68 PHE 68 67 67 PHE PHE C . n C 3 69 THR 69 68 68 THR THR C . n C 3 70 ILE 70 69 69 ILE ILE C . n C 3 71 SER 71 70 70 SER SER C . n C 3 72 ARG 72 71 71 ARG ARG C . n C 3 73 ASP 73 72 72 ASP ASP C . n C 3 74 ARG 74 73 73 ARG ARG C . n C 3 75 ALA 75 74 74 ALA ALA C . n C 3 76 LYS 76 75 75 LYS LYS C . n C 3 77 ASN 77 76 76 ASN ASN C . n C 3 78 THR 78 77 77 THR THR C . n C 3 79 VAL 79 78 78 VAL VAL C . n C 3 80 TYR 80 79 79 TYR TYR C . n C 3 81 LEU 81 80 80 LEU LEU C . n C 3 82 GLN 82 81 81 GLN GLN C . n C 3 83 MET 83 82 82 MET MET C . n C 3 84 ASP 84 83 83 ASP ASP C . n C 3 85 SER 85 84 84 SER SER C . n C 3 86 LEU 86 85 85 LEU LEU C . n C 3 87 LYS 87 86 86 LYS LYS C . n C 3 88 PRO 88 87 87 PRO PRO C . n C 3 89 GLU 89 88 88 GLU GLU C . n C 3 90 ASP 90 89 89 ASP ASP C . n C 3 91 THR 91 90 90 THR THR C . n C 3 92 ALA 92 91 91 ALA ALA C . n C 3 93 VAL 93 92 92 VAL VAL C . n C 3 94 TYR 94 93 93 TYR TYR C . n C 3 95 TYR 95 94 94 TYR TYR C . n C 3 96 CYS 96 95 95 CYS CYS C . n C 3 97 ALA 97 96 96 ALA ALA C . n C 3 98 GLY 98 97 97 GLY GLY C . n C 3 99 ARG 99 98 98 ARG ARG C . n C 3 100 LEU 100 99 99 LEU LEU C . n C 3 101 SER 101 100 100 SER SER C . n C 3 102 ARG 102 101 101 ARG ARG C . n C 3 103 PHE 103 102 102 PHE PHE C . n C 3 104 PRO 104 103 103 PRO PRO C . n C 3 105 GLY 105 104 104 GLY GLY C . n C 3 106 GLU 106 105 105 GLU GLU C . n C 3 107 TYR 107 106 106 TYR TYR C . n C 3 108 ASP 108 107 107 ASP ASP C . n C 3 109 TYR 109 108 108 TYR TYR C . n C 3 110 TRP 110 109 109 TRP TRP C . n C 3 111 SER 111 110 110 SER SER C . n C 3 112 LYS 112 111 111 LYS LYS C . n C 3 113 GLY 113 112 112 GLY GLY C . n C 3 114 THR 114 113 113 THR THR C . n C 3 115 PRO 115 114 114 PRO PRO C . n C 3 116 VAL 116 115 115 VAL VAL C . n C 3 117 MET 117 116 116 MET MET C . n C 3 118 VAL 118 117 117 VAL VAL C . n C 3 119 SER 119 118 118 SER SER C . n # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B VAL 11 ? CG1 ? A VAL 11 CG1 2 1 Y 1 B VAL 11 ? CG2 ? A VAL 11 CG2 3 1 Y 1 B VAL 12 ? CG1 ? A VAL 12 CG1 4 1 Y 1 B VAL 12 ? CG2 ? A VAL 12 CG2 5 1 Y 1 B PRO 13 ? CG ? A PRO 13 CG 6 1 Y 1 B PRO 13 ? CD ? A PRO 13 CD 7 1 Y 1 B ILE 14 ? CG1 ? A ILE 14 CG1 8 1 Y 1 B ILE 14 ? CG2 ? A ILE 14 CG2 9 1 Y 1 B ILE 14 ? CD1 ? A ILE 14 CD1 10 1 Y 1 B LEU 15 ? CG ? A LEU 15 CG 11 1 Y 1 B LEU 15 ? CD1 ? A LEU 15 CD1 12 1 Y 1 B LEU 15 ? CD2 ? A LEU 15 CD2 13 1 Y 1 B VAL 16 ? CG1 ? A VAL 16 CG1 14 1 Y 1 B VAL 16 ? CG2 ? A VAL 16 CG2 15 1 Y 1 B GLU 17 ? CG ? A GLU 17 CG 16 1 Y 1 B GLU 17 ? CD ? A GLU 17 CD 17 1 Y 1 B GLU 17 ? OE1 ? A GLU 17 OE1 18 1 Y 1 B GLU 17 ? OE2 ? A GLU 17 OE2 19 1 Y 1 B LEU 18 ? CG ? A LEU 18 CG 20 1 Y 1 B LEU 18 ? CD1 ? A LEU 18 CD1 21 1 Y 1 B LEU 18 ? CD2 ? A LEU 18 CD2 22 1 Y 1 B ASP 19 ? CG ? A ASP 19 CG 23 1 Y 1 B ASP 19 ? OD1 ? A ASP 19 OD1 24 1 Y 1 B ASP 19 ? OD2 ? A ASP 19 OD2 25 1 Y 1 B LYS 52 ? CG ? A LYS 52 CG 26 1 Y 1 B LYS 52 ? CD ? A LYS 52 CD 27 1 Y 1 B LYS 52 ? CE ? A LYS 52 CE 28 1 Y 1 B LYS 52 ? NZ ? A LYS 52 NZ 29 1 Y 1 B LYS 101 ? CG ? A LYS 101 CG 30 1 Y 1 B LYS 101 ? CD ? A LYS 101 CD 31 1 Y 1 B LYS 101 ? CE ? A LYS 101 CE 32 1 Y 1 B LYS 101 ? NZ ? A LYS 101 NZ 33 1 Y 1 B LYS 131 ? CG ? A LYS 131 CG 34 1 Y 1 B LYS 131 ? CD ? A LYS 131 CD 35 1 Y 1 B LYS 131 ? CE ? A LYS 131 CE 36 1 Y 1 B LYS 131 ? NZ ? A LYS 131 NZ 37 1 Y 1 B LYS 156 ? CG ? A LYS 156 CG 38 1 Y 1 B LYS 156 ? CD ? A LYS 156 CD 39 1 Y 1 B LYS 156 ? CE ? A LYS 156 CE 40 1 Y 1 B LYS 156 ? NZ ? A LYS 156 NZ 41 1 Y 1 B GLN 157 ? CG ? A GLN 157 CG 42 1 Y 1 B GLN 157 ? CD ? A GLN 157 CD 43 1 Y 1 B GLN 157 ? OE1 ? A GLN 157 OE1 44 1 Y 1 B GLN 157 ? NE2 ? A GLN 157 NE2 45 1 Y 1 B LYS 158 ? CG ? A LYS 158 CG 46 1 Y 1 B LYS 158 ? CD ? A LYS 158 CD 47 1 Y 1 B LYS 158 ? CE ? A LYS 158 CE 48 1 Y 1 B LYS 158 ? NZ ? A LYS 158 NZ 49 1 Y 1 B LYS 214 ? CG ? A LYS 214 CG 50 1 Y 1 B LYS 214 ? CD ? A LYS 214 CD 51 1 Y 1 B LYS 214 ? CE ? A LYS 214 CE 52 1 Y 1 B LYS 214 ? NZ ? A LYS 214 NZ 53 1 Y 1 D LYS 13 ? CG ? B LYS 13 CG 54 1 Y 1 D LYS 13 ? CD ? B LYS 13 CD 55 1 Y 1 D LYS 13 ? CE ? B LYS 13 CE 56 1 Y 1 D LYS 13 ? NZ ? B LYS 13 NZ 57 1 Y 1 D ARG 56 ? CG ? B ARG 57 CG 58 1 Y 1 D ARG 56 ? CD ? B ARG 57 CD 59 1 Y 1 D ARG 56 ? NE ? B ARG 57 NE 60 1 Y 1 D ARG 56 ? CZ ? B ARG 57 CZ 61 1 Y 1 D ARG 56 ? NH1 ? B ARG 57 NH1 62 1 Y 1 D ARG 56 ? NH2 ? B ARG 57 NH2 63 1 Y 1 D ARG 75 ? CG ? B ARG 76 CG 64 1 Y 1 D ARG 75 ? CD ? B ARG 76 CD 65 1 Y 1 D ARG 75 ? NE ? B ARG 76 NE 66 1 Y 1 D ARG 75 ? CZ ? B ARG 76 CZ 67 1 Y 1 D ARG 75 ? NH1 ? B ARG 76 NH1 68 1 Y 1 D ARG 75 ? NH2 ? B ARG 76 NH2 69 1 Y 1 D MET 82 ? CG ? B MET 83 CG 70 1 Y 1 D MET 82 ? SD ? B MET 83 SD 71 1 Y 1 D MET 82 ? CE ? B MET 83 CE 72 1 Y 1 D LYS 83 ? CG ? B LYS 87 CG 73 1 Y 1 D LYS 83 ? CD ? B LYS 87 CD 74 1 Y 1 D LYS 83 ? CE ? B LYS 87 CE 75 1 Y 1 D LYS 83 ? NZ ? B LYS 87 NZ 76 1 Y 1 C GLU 44 ? CG ? C GLU 45 CG 77 1 Y 1 C GLU 44 ? CD ? C GLU 45 CD 78 1 Y 1 C GLU 44 ? OE1 ? C GLU 45 OE1 79 1 Y 1 C GLU 44 ? OE2 ? C GLU 45 OE2 80 1 Y 1 C LYS 64 ? CG ? C LYS 65 CG 81 1 Y 1 C LYS 64 ? CD ? C LYS 65 CD 82 1 Y 1 C LYS 64 ? CE ? C LYS 65 CE 83 1 Y 1 C LYS 64 ? NZ ? C LYS 65 NZ 84 1 Y 1 C MET 82 ? CG ? C MET 83 CG 85 1 Y 1 C MET 82 ? SD ? C MET 83 SD 86 1 Y 1 C MET 82 ? CE ? C MET 83 CE 87 1 Y 1 C LYS 86 ? CG ? C LYS 87 CG 88 1 Y 1 C LYS 86 ? CD ? C LYS 87 CD 89 1 Y 1 C LYS 86 ? CE ? C LYS 87 CE 90 1 Y 1 C LYS 86 ? NZ ? C LYS 87 NZ 91 1 Y 1 C GLU 88 ? CG ? C GLU 89 CG 92 1 Y 1 C GLU 88 ? CD ? C GLU 89 CD 93 1 Y 1 C GLU 88 ? OE1 ? C GLU 89 OE1 94 1 Y 1 C GLU 88 ? OE2 ? C GLU 89 OE2 95 1 Y 1 C LYS 111 ? CG ? C LYS 112 CG 96 1 Y 1 C LYS 111 ? CD ? C LYS 112 CD 97 1 Y 1 C LYS 111 ? CE ? C LYS 112 CE 98 1 Y 1 C LYS 111 ? NZ ? C LYS 112 NZ # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8RLE _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8RLE _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8RLE _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 8RLE _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.002 ? 3502 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.511 ? 4752 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 4.116 ? 493 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.044 ? 512 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.004 ? 630 ? f_plane_restr ? ? # _struct.entry_id 8RLE _struct.title 'SPNS2:sfGFP hetero dimer assembled by Di-Gluebody - sfGFP local refinement' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8RLE _struct_keywords.text 'DNA helicase, Di-Gluebody, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP A0A059PIQ0_AEQVI A0A059PIQ0 ? 1 ;MRKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATNGKLTLKFICTTGKLPVPWPTLVTTLTYGVQCFARYPDHMKQ HDFFKSAMPEGYVQERTISFKDDGTYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNFNSHNVYITADKQKNG IKANFKIRHNVEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEFVTAAGITHGMDELYK ; 1 2 PDB 8RLE 8RLE ? 2 ? 1 3 PDB 8RLE 8RLE ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8RLE B 1 ? 238 ? A0A059PIQ0 1 ? 238 ? 1 238 2 2 8RLE D 1 ? 114 ? 8RLE 1 ? 110 ? 1 110 3 3 8RLE C 1 ? 119 ? 8RLE 0 ? 118 ? 0 118 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8RLE SER B 2 ? UNP A0A059PIQ0 ARG 2 conflict 2 1 1 8RLE ARG B 30 ? UNP A0A059PIQ0 SER 30 conflict 30 2 1 8RLE SER B 72 ? UNP A0A059PIQ0 ALA 72 conflict 72 3 1 8RLE ARG B 80 ? UNP A0A059PIQ0 GLN 80 conflict 80 4 1 8RLE VAL B 206 ? UNP A0A059PIQ0 ALA 206 conflict 206 5 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 TRP A 57 ? TYR A 66 ? TRP B 57 TYR B 66 1 ? 10 HELX_P HELX_P2 AA2 PRO A 75 ? ARG A 80 ? PRO B 75 ARG B 80 1 ? 6 HELX_P HELX_P3 AA3 ALA A 87 ? GLU A 90 ? ALA B 87 GLU B 90 5 ? 4 HELX_P HELX_P4 AA4 GLY A 134 ? HIS A 139 ? GLY B 134 HIS B 139 1 ? 6 HELX_P HELX_P5 AA5 LYS B 87 ? ALA B 92 ? LYS D 83 ALA D 88 5 ? 6 HELX_P HELX_P6 AA6 ASN C 62 ? LYS C 65 ? ASN C 61 LYS C 64 5 ? 4 HELX_P HELX_P7 AA7 LYS C 87 ? THR C 91 ? LYS C 86 THR C 90 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? B CYS 11 SG ? ? ? 1_555 C CYS 12 SG ? ? D CYS 11 C CYS 11 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf2 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 96 SG ? ? D CYS 22 D CYS 92 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf3 disulf ? ? C CYS 23 SG ? ? ? 1_555 C CYS 96 SG ? ? C CYS 22 C CYS 95 1_555 ? ? ? ? ? ? ? 2.034 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS B 11 ? CYS C 12 ? CYS D 11 ? 1_555 CYS C 11 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS B 22 ? CYS B 96 ? CYS D 22 ? 1_555 CYS D 92 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS C 23 ? CYS C 96 ? CYS C 22 ? 1_555 CYS C 95 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 12 ? AA2 ? 4 ? AA3 ? 4 ? AA4 ? 4 ? AA5 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel AA1 8 9 ? anti-parallel AA1 9 10 ? anti-parallel AA1 10 11 ? anti-parallel AA1 11 12 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 11 ? VAL A 22 ? VAL B 11 VAL B 22 AA1 2 HIS A 25 ? ASP A 36 ? HIS B 25 ASP B 36 AA1 3 LYS A 41 ? CYS A 48 ? LYS B 41 CYS B 48 AA1 4 VAL A 219 ? ALA A 227 ? VAL B 219 ALA B 227 AA1 5 ASN A 198 ? SER A 208 ? ASN B 198 SER B 208 AA1 6 HIS A 148 ? ASP A 155 ? HIS B 148 ASP B 155 AA1 7 GLY A 160 ? ASN A 170 ? GLY B 160 ASN B 170 AA1 8 VAL A 176 ? PRO A 187 ? VAL B 176 PRO B 187 AA1 9 TYR A 92 ? SER A 99 ? TYR B 92 SER B 99 AA1 10 THR A 105 ? GLU A 115 ? THR B 105 GLU B 115 AA1 11 THR A 118 ? ILE A 128 ? THR B 118 ILE B 128 AA1 12 VAL A 11 ? VAL A 22 ? VAL B 11 VAL B 22 AA2 1 GLN B 3 ? ASN B 7 ? GLN D 3 ASN D 7 AA2 2 ARG B 19 ? SER B 25 ? ARG D 19 SER D 25 AA2 3 THR B 78 ? GLN B 82 ? THR D 77 GLN D 81 AA2 4 SER B 71 ? ASP B 73 ? SER D 70 ASP D 72 AA3 1 SER B 58 ? TYR B 60 ? SER D 57 TYR D 59 AA3 2 GLU B 46 ? MET B 51 ? GLU D 46 MET D 51 AA3 3 MET B 34 ? GLN B 39 ? MET D 34 GLN D 39 AA3 4 VAL B 93 ? ASN B 97 ? VAL D 89 ASN D 93 AA4 1 LEU C 5 ? ASN C 8 ? LEU C 4 ASN C 7 AA4 2 ARG C 20 ? ALA C 25 ? ARG C 19 ALA C 24 AA4 3 THR C 78 ? MET C 83 ? THR C 77 MET C 82 AA4 4 PHE C 68 ? ASP C 73 ? PHE C 67 ASP C 72 AA5 1 THR C 58 ? TYR C 60 ? THR C 57 TYR C 59 AA5 2 GLU C 47 ? ILE C 52 ? GLU C 46 ILE C 51 AA5 3 VAL C 34 ? ARG C 40 ? VAL C 33 ARG C 39 AA5 4 VAL C 93 ? ARG C 99 ? VAL C 92 ARG C 98 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 14 ? N ILE B 14 O GLY A 33 ? O GLY B 33 AA1 2 3 N GLU A 34 ? N GLU B 34 O THR A 43 ? O THR B 43 AA1 3 4 N LEU A 44 ? N LEU B 44 O LEU A 220 ? O LEU B 220 AA1 4 5 O VAL A 219 ? O VAL B 219 N SER A 208 ? N SER B 208 AA1 5 6 O THR A 203 ? O THR B 203 N HIS A 148 ? N HIS B 148 AA1 6 7 N THR A 153 ? N THR B 153 O LYS A 162 ? O LYS B 162 AA1 7 8 N PHE A 165 ? N PHE B 165 O HIS A 181 ? O HIS B 181 AA1 8 9 O GLN A 184 ? O GLN B 184 N GLU A 95 ? N GLU B 95 AA1 9 10 N GLN A 94 ? N GLN B 94 O ALA A 110 ? O ALA B 110 AA1 10 11 N LYS A 113 ? N LYS B 113 O VAL A 120 ? O VAL B 120 AA1 11 12 O LEU A 125 ? O LEU B 125 N ASP A 21 ? N ASP B 21 AA2 1 2 N VAL B 5 ? N VAL D 5 O ALA B 23 ? O ALA D 23 AA2 2 3 N CYS B 22 ? N CYS D 22 O VAL B 79 ? O VAL D 78 AA2 3 4 O TYR B 80 ? O TYR D 79 N SER B 71 ? N SER D 70 AA3 1 2 O SER B 59 ? O SER D 58 N GLY B 50 ? N GLY D 50 AA3 2 3 O GLU B 46 ? O GLU D 46 N ARG B 38 ? N ARG D 38 AA3 3 4 N ARG B 35 ? N ARG D 35 O ASN B 97 ? O ASN D 93 AA4 1 2 N VAL C 6 ? N VAL C 5 O ALA C 24 ? O ALA C 23 AA4 2 3 N LEU C 21 ? N LEU C 20 O LEU C 81 ? O LEU C 80 AA4 3 4 O GLN C 82 ? O GLN C 81 N THR C 69 ? N THR C 68 AA5 1 2 O VAL C 59 ? O VAL C 58 N ASN C 51 ? N ASN C 50 AA5 2 3 O GLU C 47 ? O GLU C 46 N ARG C 39 ? N ARG C 38 AA5 3 4 N PHE C 38 ? N PHE C 37 O TYR C 95 ? O TYR C 94 # _pdbx_entry_details.entry_id 8RLE _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP B 102 ? ? 76.76 -2.21 2 1 ASP B 133 ? ? 80.11 -0.57 3 1 ASN D 82 A ? 60.14 -128.14 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8RLE _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value 154.9 _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol ? # _em_3d_fitting_list.id 1 _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.pdb_entry_id 3K1K _em_3d_fitting_list.pdb_chain_id ? _em_3d_fitting_list.pdb_chain_residue_range ? _em_3d_fitting_list.details ? _em_3d_fitting_list.chain_id ? _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name PDB _em_3d_fitting_list.type 'experimental model' _em_3d_fitting_list.accession_code 3K1K _em_3d_fitting_list.initial_refinement_model_id 1 # _em_3d_reconstruction.entry_id 8RLE _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.75 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 321178 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.5 # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.name _em_entity_assembly.details _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details _em_entity_assembly.entity_id_list 1 0 'MULTIPLE SOURCES' COMPLEX 'Local refinement of GFP part of the SPNS2:sfGFP heterodimer assembled by Di-Gluebody' 'GbEnhancer and GbC4 were assembled via a disulfide to form a hetero Di-Gluebody' ? ? '1, 2, 3' 2 1 RECOMBINANT COMPLEX 'Green fluorescent protein' 'Green fluorescent protein' ? ? ? 3 1 RECOMBINANT COMPLEX Di-Gluebody 'Gluebody GbEnhancer and Gluebody GbC4' ? ? ? # _em_imaging.entry_id 8RLE _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1500 _em_imaging.nominal_defocus_max 2500 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 8RLE _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8RLE _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 8RLE _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B MET 1 ? A MET 1 2 1 Y 1 B SER 2 ? A SER 2 3 1 Y 1 B LYS 3 ? A LYS 3 4 1 Y 1 B GLY 4 ? A GLY 4 5 1 Y 1 B GLU 5 ? A GLU 5 6 1 Y 1 B GLU 6 ? A GLU 6 7 1 Y 1 B LEU 7 ? A LEU 7 8 1 Y 1 B GLY 228 ? A GLY 228 9 1 Y 1 B ILE 229 ? A ILE 229 10 1 Y 1 B THR 230 ? A THR 230 11 1 Y 1 B HIS 231 ? A HIS 231 12 1 Y 1 B GLY 232 ? A GLY 232 13 1 Y 1 B MET 233 ? A MET 233 14 1 Y 1 B ASP 234 ? A ASP 234 15 1 Y 1 B GLU 235 ? A GLU 235 16 1 Y 1 B LEU 236 ? A LEU 236 17 1 Y 1 B TYR 237 ? A TYR 237 18 1 Y 1 B LYS 238 ? A LYS 238 19 1 Y 1 C SER 0 ? C SER 1 20 1 Y 1 C GLN 1 ? C GLN 2 21 1 Y 1 C GLY 2 ? C GLY 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _em_admin.current_status REL _em_admin.deposition_date 2024-01-02 _em_admin.deposition_site PDBE _em_admin.entry_id 8RLE _em_admin.last_update 2025-12-24 _em_admin.map_release_date 2025-01-15 _em_admin.title 'SPNS2:sfGFP hetero dimer assembled by Di-Gluebody - sfGFP local refinement' # loop_ _em_buffer_component.buffer_id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.id _em_buffer_component.name 1 20 mM C8H18N2O4S 1 HEPES 1 150 mM NaCl 2 'sodium chloride' 1 0.025 % C24H46O11 3 DDM # _em_ctf_correction.details 'patch-ctf correction in cryoSPARC' _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.112 # loop_ _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue _em_entity_assembly_naturalsource.details ? ? 2 2 6100 'Aequorea victoria' ? ? ? ? ? ? ? 3 3 9844 'Lama glama' ? ? ? ? ? # loop_ _em_entity_assembly_recombinant.cell _em_entity_assembly_recombinant.entity_assembly_id _em_entity_assembly_recombinant.id _em_entity_assembly_recombinant.ncbi_tax_id _em_entity_assembly_recombinant.organism _em_entity_assembly_recombinant.plasmid _em_entity_assembly_recombinant.strain ? 2 2 562 'Escherichia coli' ? ? ? 3 3 562 'Escherichia coli' ? ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 50 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'FEI FALCON IV (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images 8674 # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 1127724 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC 4.0 'IMAGE ACQUISITION' ? 2 ? ? 1 EPU ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? cryoSPARC 4.0 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? 'UCSF ChimeraX' ? OTHER ? 8 ? ? ? ? ? 'MODEL REFINEMENT' ? 9 ? 1 ? PHENIX ? 'MODEL REFINEMENT' ? 10 ? 1 ? Coot ? 'INITIAL EULER ASSIGNMENT' ? 11 1 ? ? cryoSPARC 4.0 'FINAL EULER ASSIGNMENT' ? 12 1 ? ? cryoSPARC 4.0 CLASSIFICATION ? 13 1 ? ? ? ? RECONSTRUCTION ? 14 1 ? ? cryoSPARC 4.0 # _em_specimen.concentration 4.2 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Other private' _pdbx_audit_support.country 'United Kingdom' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3K1K # _atom_sites.entry_id 8RLE _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ #