HEADER MEMBRANE PROTEIN 25-JAN-24 8RSP TITLE CRYSTAL STRUCTURE OF MARINE ACTINOBACTERIA CLADE RHODOPSIN (MAR) IN TITLE 2 THE P596 STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MICROBIAL RHODOPSIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MARINE ACTINOBACTERIA CLADE; SOURCE 3 ORGANISM_TAXID: 62676; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MAC, MACR, MAR, PROTEORHODOPSIN, PR, XANTHORODOPSIN, XR, MEMBRANE KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.BUKHDRUKER,K.KOVALEV,R.ASTASHKIN,V.GORDELIY REVDAT 1 02-APR-25 8RSP 0 JRNL AUTH V.SHEVCHENKO,I.GUSHCHIN,V.POLOVINKIN,K.KOVALEV JRNL TITL PROTEORHODOPSIN INSIGHTS INTO MOLECULAR MECHANISM OF JRNL TITL 2 VECTORIAL PROTON TRANSPORT JRNL REF SCI ADV 2025 JRNL REFN ESSN 2375-2548 REMARK 2 REMARK 2 RESOLUTION. 1.41 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.41 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.19 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 59.4 REMARK 3 NUMBER OF REFLECTIONS : 51307 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.234 REMARK 3 R VALUE (WORKING SET) : 0.232 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.680 REMARK 3 FREE R VALUE TEST SET COUNT : 2403 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.1900 - 3.6200 0.91 4418 234 0.1919 0.2218 REMARK 3 2 3.6200 - 2.8700 0.92 4391 255 0.2069 0.2595 REMARK 3 3 2.8700 - 2.5100 0.91 4432 194 0.2157 0.2409 REMARK 3 4 2.5100 - 2.2800 0.87 4271 167 0.2256 0.2443 REMARK 3 5 2.2800 - 2.1200 0.77 3752 135 0.3056 0.3834 REMARK 3 6 2.1200 - 1.9900 0.89 4330 211 0.2464 0.2542 REMARK 3 7 1.9900 - 1.8900 0.68 3278 169 0.3920 0.3774 REMARK 3 8 1.8900 - 1.8100 0.77 3674 198 0.3160 0.3312 REMARK 3 9 1.8100 - 1.7400 0.72 3467 204 0.2987 0.3105 REMARK 3 10 1.7400 - 1.6800 0.65 3146 186 0.3122 0.3065 REMARK 3 11 1.6800 - 1.6300 0.59 2853 145 0.3193 0.3100 REMARK 3 12 1.6300 - 1.5800 0.50 2436 101 0.3142 0.3379 REMARK 3 13 1.5800 - 1.5400 0.39 1860 102 0.3273 0.3292 REMARK 3 14 1.5400 - 1.5000 0.24 1179 57 0.3292 0.3357 REMARK 3 15 1.5000 - 1.4700 0.17 834 22 0.4036 0.4936 REMARK 3 16 1.4700 - 1.4400 0.10 476 21 0.3468 0.3949 REMARK 3 17 1.4400 - 1.4100 0.02 107 2 0.4096 0.1831 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.191 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 40.928 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.28 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3877 REMARK 3 ANGLE : 0.773 5214 REMARK 3 CHIRALITY : 0.064 553 REMARK 3 PLANARITY : 0.006 634 REMARK 3 DIHEDRAL : 13.379 1444 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 29 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.5387 -5.3452 3.8631 REMARK 3 T TENSOR REMARK 3 T11: 0.2192 T22: 0.2009 REMARK 3 T33: 0.3406 T12: -0.0380 REMARK 3 T13: 0.0270 T23: -0.0258 REMARK 3 L TENSOR REMARK 3 L11: 1.3947 L22: 1.3141 REMARK 3 L33: 1.7439 L12: 1.1019 REMARK 3 L13: -0.1965 L23: 1.0309 REMARK 3 S TENSOR REMARK 3 S11: -0.0425 S12: 0.0232 S13: -0.3346 REMARK 3 S21: 0.2036 S22: -0.4230 S23: 0.1648 REMARK 3 S31: 0.1929 S32: 0.1104 S33: -0.5279 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 30 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.8800 -3.1987 -4.3093 REMARK 3 T TENSOR REMARK 3 T11: 0.1710 T22: 0.1492 REMARK 3 T33: 0.1480 T12: -0.0061 REMARK 3 T13: -0.0330 T23: -0.0709 REMARK 3 L TENSOR REMARK 3 L11: 2.9271 L22: 1.1450 REMARK 3 L33: 3.3460 L12: 0.0448 REMARK 3 L13: -0.0562 L23: 1.5520 REMARK 3 S TENSOR REMARK 3 S11: -0.0043 S12: 0.1734 S13: -0.4327 REMARK 3 S21: -0.6869 S22: -0.1477 S23: 0.5624 REMARK 3 S31: -0.1679 S32: -0.1077 S33: -0.2701 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 62 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.3047 -2.5801 -3.5014 REMARK 3 T TENSOR REMARK 3 T11: 0.2192 T22: 0.2673 REMARK 3 T33: 0.2208 T12: -0.0266 REMARK 3 T13: 0.0371 T23: -0.1038 REMARK 3 L TENSOR REMARK 3 L11: 1.0329 L22: 0.3691 REMARK 3 L33: 1.6579 L12: -0.1535 REMARK 3 L13: -0.1363 L23: 0.8466 REMARK 3 S TENSOR REMARK 3 S11: 0.1813 S12: 0.1022 S13: -0.2164 REMARK 3 S21: -0.2462 S22: -0.2588 S23: 0.3335 REMARK 3 S31: 0.1862 S32: -0.2683 S33: -0.0170 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 91 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.8216 1.2445 -8.3598 REMARK 3 T TENSOR REMARK 3 T11: 0.2561 T22: 0.1976 REMARK 3 T33: 0.2171 T12: 0.0202 REMARK 3 T13: 0.0587 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 1.2593 L22: 1.8001 REMARK 3 L33: 0.8990 L12: 0.1604 REMARK 3 L13: 0.1215 L23: 0.8894 REMARK 3 S TENSOR REMARK 3 S11: 0.1258 S12: 0.1361 S13: 0.1184 REMARK 3 S21: -0.7003 S22: -0.2529 S23: -0.7257 REMARK 3 S31: -0.1840 S32: 0.2014 S33: 0.0280 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 117 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.9326 0.0137 1.0267 REMARK 3 T TENSOR REMARK 3 T11: 0.1288 T22: 0.1377 REMARK 3 T33: 0.2733 T12: -0.0107 REMARK 3 T13: 0.0001 T23: 0.0438 REMARK 3 L TENSOR REMARK 3 L11: 1.3087 L22: 1.0190 REMARK 3 L33: 1.4013 L12: 0.4509 REMARK 3 L13: -0.0618 L23: -0.3188 REMARK 3 S TENSOR REMARK 3 S11: 0.2229 S12: -0.0643 S13: -0.2083 REMARK 3 S21: -0.4506 S22: -0.1524 S23: 0.2147 REMARK 3 S31: -0.0623 S32: 0.2034 S33: 0.0858 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 150 THROUGH 184 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.3414 4.6347 7.1285 REMARK 3 T TENSOR REMARK 3 T11: 0.2485 T22: 0.2513 REMARK 3 T33: 0.2145 T12: -0.0266 REMARK 3 T13: 0.0100 T23: -0.0418 REMARK 3 L TENSOR REMARK 3 L11: 1.0842 L22: 0.9961 REMARK 3 L33: 0.7677 L12: -0.3598 REMARK 3 L13: -0.7430 L23: 0.9877 REMARK 3 S TENSOR REMARK 3 S11: -0.0778 S12: -0.3843 S13: 0.2010 REMARK 3 S21: 0.0002 S22: 0.2390 S23: -0.4058 REMARK 3 S31: -0.2084 S32: 0.1136 S33: 0.0961 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 185 THROUGH 216 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.8913 2.3036 4.2540 REMARK 3 T TENSOR REMARK 3 T11: 0.2403 T22: 0.1588 REMARK 3 T33: 0.1784 T12: 0.0316 REMARK 3 T13: 0.0125 T23: -0.0355 REMARK 3 L TENSOR REMARK 3 L11: 1.1605 L22: 1.2748 REMARK 3 L33: 1.4772 L12: 1.0041 REMARK 3 L13: 0.0525 L23: 1.0578 REMARK 3 S TENSOR REMARK 3 S11: 0.0125 S12: -0.1686 S13: -0.0890 REMARK 3 S21: 0.1543 S22: -0.0376 S23: 0.0630 REMARK 3 S31: -0.1484 S32: -0.0686 S33: -0.0626 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 29 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.0418 -18.9420 -22.7428 REMARK 3 T TENSOR REMARK 3 T11: 0.1539 T22: 0.2590 REMARK 3 T33: 0.1918 T12: 0.0224 REMARK 3 T13: 0.0086 T23: 0.0546 REMARK 3 L TENSOR REMARK 3 L11: 1.4079 L22: 0.3000 REMARK 3 L33: 2.0353 L12: -0.5033 REMARK 3 L13: 1.1757 L23: 0.2281 REMARK 3 S TENSOR REMARK 3 S11: -0.0267 S12: -0.2685 S13: -0.1314 REMARK 3 S21: -0.2056 S22: -0.1693 S23: -0.1257 REMARK 3 S31: 0.1724 S32: 0.3331 S33: 0.0071 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 30 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.1648 -13.1691 -17.7522 REMARK 3 T TENSOR REMARK 3 T11: 0.1684 T22: 0.1597 REMARK 3 T33: 0.0767 T12: -0.0018 REMARK 3 T13: 0.0019 T23: -0.0460 REMARK 3 L TENSOR REMARK 3 L11: 2.5471 L22: 1.1700 REMARK 3 L33: 2.9652 L12: 0.0478 REMARK 3 L13: 0.5024 L23: 1.7321 REMARK 3 S TENSOR REMARK 3 S11: 0.0248 S12: -0.2717 S13: -0.1473 REMARK 3 S21: 0.5671 S22: -0.1954 S23: -0.5107 REMARK 3 S31: -0.6083 S32: 0.1770 S33: -0.0841 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 66 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.6758 -8.6418 -18.8978 REMARK 3 T TENSOR REMARK 3 T11: 0.1321 T22: 0.2827 REMARK 3 T33: 0.1420 T12: 0.0345 REMARK 3 T13: 0.0315 T23: -0.0334 REMARK 3 L TENSOR REMARK 3 L11: 2.2056 L22: 0.8552 REMARK 3 L33: 3.3445 L12: -0.6222 REMARK 3 L13: 1.3324 L23: 1.0223 REMARK 3 S TENSOR REMARK 3 S11: 0.1072 S12: -0.2999 S13: 0.0304 REMARK 3 S21: -0.1669 S22: 0.0787 S23: 0.0637 REMARK 3 S31: -0.3096 S32: -0.0825 S33: 0.2242 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 123 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.1143 -11.1040 -25.5646 REMARK 3 T TENSOR REMARK 3 T11: 0.1477 T22: 0.2486 REMARK 3 T33: 0.2692 T12: 0.0593 REMARK 3 T13: 0.0002 T23: 0.0723 REMARK 3 L TENSOR REMARK 3 L11: 1.3590 L22: 0.9667 REMARK 3 L33: 1.1830 L12: -0.3771 REMARK 3 L13: 0.4635 L23: 0.8643 REMARK 3 S TENSOR REMARK 3 S11: 0.1348 S12: -0.1509 S13: 0.0119 REMARK 3 S21: -0.2745 S22: -0.1188 S23: 0.2586 REMARK 3 S31: -0.0723 S32: -0.4740 S33: -0.0955 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 150 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.4583 -4.4748 -37.0459 REMARK 3 T TENSOR REMARK 3 T11: 0.3775 T22: 0.2721 REMARK 3 T33: 0.1613 T12: 0.0379 REMARK 3 T13: 0.0482 T23: -0.0105 REMARK 3 L TENSOR REMARK 3 L11: 0.7100 L22: 0.5088 REMARK 3 L33: 0.5509 L12: -0.4301 REMARK 3 L13: 0.0023 L23: 0.3135 REMARK 3 S TENSOR REMARK 3 S11: 0.1364 S12: 0.0080 S13: 0.2121 REMARK 3 S21: -0.3137 S22: 0.0412 S23: 0.0908 REMARK 3 S31: -0.7431 S32: -0.4824 S33: 0.0374 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 169 THROUGH 217 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.3496 -16.6895 -27.5378 REMARK 3 T TENSOR REMARK 3 T11: 0.2317 T22: 0.1626 REMARK 3 T33: 0.1669 T12: -0.0231 REMARK 3 T13: -0.0220 T23: 0.0017 REMARK 3 L TENSOR REMARK 3 L11: 1.2304 L22: 0.3133 REMARK 3 L33: 1.0477 L12: -0.8177 REMARK 3 L13: 0.3336 L23: -0.0853 REMARK 3 S TENSOR REMARK 3 S11: -0.0425 S12: 0.0583 S13: -0.3137 REMARK 3 S21: -0.3252 S22: 0.1248 S23: 0.0687 REMARK 3 S31: 0.1598 S32: -0.0490 S33: 0.0117 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8RSP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-JAN-24. REMARK 100 THE DEPOSITION ID IS D_1292135903. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-OCT-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P14 (MX2) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9755 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X CDTE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20220110 REMARK 200 DATA SCALING SOFTWARE : STARANISO 2.3.89 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52344 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.410 REMARK 200 RESOLUTION RANGE LOW (A) : 40.190 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 79.5 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 40.19 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 43.60 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.0 M AMMONIUM PHOSPHATE BUFFER, PH REMARK 280 8.8, LIPIDIC CUBIC PHASE, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 217 REMARK 465 LYS A 218 REMARK 465 VAL A 219 REMARK 465 SER A 220 REMARK 465 LYS B 218 REMARK 465 VAL B 219 REMARK 465 SER B 220 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 2 CG CD OE1 OE2 REMARK 470 GLU A 3 CD OE1 OE2 REMARK 470 GLU A 29 CG CD OE1 OE2 REMARK 470 LYS A 31 CE NZ REMARK 470 LYS A 54 CD CE NZ REMARK 470 GLU A 60 CD OE1 OE2 REMARK 470 LYS A 90 CE NZ REMARK 470 ARG A 141 CZ NH1 NH2 REMARK 470 GLU A 148 CG CD OE1 OE2 REMARK 470 LYS A 151 CD CE NZ REMARK 470 GLU B 33 OE2 REMARK 470 SER B 61 OG REMARK 470 LEU B 68 CG CD1 CD2 REMARK 470 GLU B 124 OE1 OE2 REMARK 470 ARG B 141 CZ NH1 NH2 REMARK 470 GLU B 148 OE1 OE2 REMARK 470 LYS B 151 CD CE NZ REMARK 470 VAL B 181 CG1 CG2 REMARK 470 ASP B 183 CG OD1 OD2 REMARK 470 GLU B 217 CA C O CB CG CD OE1 REMARK 470 GLU B 217 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR B 117 10.95 -65.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 OLC A 302 REMARK 610 LFA A 303 REMARK 610 LFA A 304 REMARK 610 LFA A 305 REMARK 610 LFA A 306 REMARK 610 LFA A 307 REMARK 610 LFA A 308 REMARK 610 LFA A 309 REMARK 610 OLC A 311 REMARK 610 OLC A 312 REMARK 610 LFA A 313 REMARK 610 OLC A 315 REMARK 610 OLC B 301 REMARK 610 LFA B 302 REMARK 610 LFA B 303 REMARK 610 LFA B 304 REMARK 610 OLC B 305 REMARK 610 OLC B 306 REMARK 610 OLC B 307 REMARK 610 OLC B 308 REMARK 610 LFA B 309 REMARK 610 LFA B 310 REMARK 610 LFA B 311 REMARK 610 LFA B 312 DBREF 8RSP A 1 220 PDB 8RSP 8RSP 1 220 DBREF 8RSP B 1 220 PDB 8RSP 8RSP 1 220 SEQRES 1 A 220 MET GLU GLU LEU THR TYR ARG LEU PHE MET VAL ALA THR SEQRES 2 A 220 VAL GLY MET LEU ALA GLY THR VAL PHE LEU LEU ALA SER SEQRES 3 A 220 SER ARG GLU VAL LYS PRO GLU HIS ARG ARG GLY VAL TYR SEQRES 4 A 220 ILE SER ALA LEU VAL CYS GLY ILE ALA TRP TYR HIS TYR SEQRES 5 A 220 GLN LYS MET GLY ALA SER TRP GLU SER GLY SER TYR ASP SEQRES 6 A 220 THR GLY LEU ARG TYR VAL ASP TRP VAL LEU THR VAL PRO SEQRES 7 A 220 LEU MET PHE VAL GLU VAL LEU ALA VAL THR ARG LYS GLY SEQRES 8 A 220 ALA ALA TYR ASN GLU ALA VAL ARG ASN TRP GLY ILE ALA SEQRES 9 A 220 ALA THR VAL MET ILE GLY ALA GLY TYR TYR GLY GLU THR SEQRES 10 A 220 SER ALA ALA GLY SER ASN GLU TYR TRP THR GLY PHE VAL SEQRES 11 A 220 ILE ALA MET ALA THR TYR VAL TRP LEU MET ARG ASN LEU SEQRES 12 A 220 GLN ALA GLU GLY GLU GLY LEU LYS GLY ASP GLN ALA VAL SEQRES 13 A 220 ALA PHE GLU ASN ILE LYS ASN LEU ILE LEU VAL GLY TRP SEQRES 14 A 220 ILE ILE TYR PRO LEU GLY TYR ILE ALA PRO VAL VAL GLY SEQRES 15 A 220 ASP PHE ASP ALA ILE ARG GLU VAL LEU TYR THR ILE ALA SEQRES 16 A 220 ASP ILE ILE ASN LYS VAL GLY LEU GLY VAL LEU VAL LEU SEQRES 17 A 220 GLN MET ALA ARG VAL GLN SER GLY GLU LYS VAL SER SEQRES 1 B 220 MET GLU GLU LEU THR TYR ARG LEU PHE MET VAL ALA THR SEQRES 2 B 220 VAL GLY MET LEU ALA GLY THR VAL PHE LEU LEU ALA SER SEQRES 3 B 220 SER ARG GLU VAL LYS PRO GLU HIS ARG ARG GLY VAL TYR SEQRES 4 B 220 ILE SER ALA LEU VAL CYS GLY ILE ALA TRP TYR HIS TYR SEQRES 5 B 220 GLN LYS MET GLY ALA SER TRP GLU SER GLY SER TYR ASP SEQRES 6 B 220 THR GLY LEU ARG TYR VAL ASP TRP VAL LEU THR VAL PRO SEQRES 7 B 220 LEU MET PHE VAL GLU VAL LEU ALA VAL THR ARG LYS GLY SEQRES 8 B 220 ALA ALA TYR ASN GLU ALA VAL ARG ASN TRP GLY ILE ALA SEQRES 9 B 220 ALA THR VAL MET ILE GLY ALA GLY TYR TYR GLY GLU THR SEQRES 10 B 220 SER ALA ALA GLY SER ASN GLU TYR TRP THR GLY PHE VAL SEQRES 11 B 220 ILE ALA MET ALA THR TYR VAL TRP LEU MET ARG ASN LEU SEQRES 12 B 220 GLN ALA GLU GLY GLU GLY LEU LYS GLY ASP GLN ALA VAL SEQRES 13 B 220 ALA PHE GLU ASN ILE LYS ASN LEU ILE LEU VAL GLY TRP SEQRES 14 B 220 ILE ILE TYR PRO LEU GLY TYR ILE ALA PRO VAL VAL GLY SEQRES 15 B 220 ASP PHE ASP ALA ILE ARG GLU VAL LEU TYR THR ILE ALA SEQRES 16 B 220 ASP ILE ILE ASN LYS VAL GLY LEU GLY VAL LEU VAL LEU SEQRES 17 B 220 GLN MET ALA ARG VAL GLN SER GLY GLU LYS VAL SER HET OLC A 301 25 HET OLC A 302 19 HET LFA A 303 10 HET LFA A 304 4 HET LFA A 305 7 HET LFA A 306 6 HET LFA A 307 3 HET LFA A 308 3 HET LFA A 309 7 HET GOL A 310 6 HET OLC A 311 15 HET OLC A 312 12 HET LFA A 313 13 HET GOL A 314 6 HET OLC A 315 9 HET GOL A 316 6 HET RET A 317 20 HET OLC B 301 10 HET LFA B 302 7 HET LFA B 303 8 HET LFA B 304 3 HET OLC B 305 7 HET OLC B 306 7 HET OLC B 307 12 HET OLC B 308 12 HET LFA B 309 12 HET LFA B 310 9 HET LFA B 311 12 HET LFA B 312 4 HET PO4 B 313 5 HET RET B 314 20 HETNAM OLC (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE HETNAM LFA EICOSANE HETNAM GOL GLYCEROL HETNAM RET RETINAL HETNAM PO4 PHOSPHATE ION HETSYN OLC 1-OLEOYL-R-GLYCEROL HETSYN LFA LIPID FRAGMENT HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 OLC 10(C21 H40 O4) FORMUL 5 LFA 15(C20 H42) FORMUL 12 GOL 3(C3 H8 O3) FORMUL 19 RET 2(C20 H28 O) FORMUL 32 PO4 O4 P 3- FORMUL 34 HOH *55(H2 O) HELIX 1 AA1 MET A 1 SER A 27 1 27 HELIX 2 AA2 ARG A 28 VAL A 30 5 3 HELIX 3 AA3 LYS A 31 HIS A 34 5 4 HELIX 4 AA4 ARG A 35 GLY A 62 1 28 HELIX 5 AA5 THR A 66 ARG A 89 1 24 HELIX 6 AA6 LYS A 90 THR A 117 1 28 HELIX 7 AA7 SER A 122 GLY A 147 1 26 HELIX 8 AA8 GLU A 148 LEU A 150 5 3 HELIX 9 AA9 LYS A 151 TRP A 169 1 19 HELIX 10 AB1 ILE A 170 ALA A 178 1 9 HELIX 11 AB2 PRO A 179 VAL A 181 5 3 HELIX 12 AB3 PHE A 184 GLY A 216 1 33 HELIX 13 AB4 GLU B 2 SER B 27 1 26 HELIX 14 AB5 ARG B 28 VAL B 30 5 3 HELIX 15 AB6 LYS B 31 HIS B 34 5 4 HELIX 16 AB7 ARG B 35 SER B 61 1 27 HELIX 17 AB8 THR B 66 ARG B 89 1 24 HELIX 18 AB9 LYS B 90 THR B 117 1 28 HELIX 19 AC1 SER B 122 GLY B 147 1 26 HELIX 20 AC2 GLU B 148 LEU B 150 5 3 HELIX 21 AC3 LYS B 151 TRP B 169 1 19 HELIX 22 AC4 ILE B 170 ALA B 178 1 9 HELIX 23 AC5 PRO B 179 VAL B 181 5 3 HELIX 24 AC6 PHE B 184 GLY B 216 1 33 LINK NZ LYS A 200 C15 RET A 317 1555 1555 1.46 LINK NZ LYS B 200 C15 RET B 314 1555 1555 1.46 CRYST1 40.684 55.982 56.728 64.41 81.31 84.43 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024580 -0.002397 -0.003026 0.00000 SCALE2 0.000000 0.017948 -0.008405 0.00000 SCALE3 0.000000 0.000000 0.019691 0.00000