HEADER HYDROLASE 30-JAN-24 8RUA TITLE CRYSTAL STRUCTURE OF RHIZOBIUM ETLI L-ASPARAGINASE REAV C135A MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: L-ASPARAGINASE II PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 OTHER_DETAILS: POINT MUTATION C135A SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHIZOBIUM ETLI; SOURCE 3 ORGANISM_TAXID: 29449; SOURCE 4 GENE: ANSA, RHE_PE00350; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RHIZOBIUM ETLI; AMIDOHYDROLASES; L-ASPARAGINASES; ZINC-BINDING KEYWDS 2 PROTEINS; SITE-DIRECTED MUTAGENESIS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.POKRYWKA,M.GRZECHOWIAK,J.SLIWIAK,P.WORSZTYNOWICZ,J.I.LOCH, AUTHOR 2 M.RUSZKOWSKI,M.GILSKI,M.JASKOLSKI REVDAT 2 01-MAY-24 8RUA 1 JRNL REVDAT 1 17-APR-24 8RUA 0 JRNL AUTH K.POKRYWKA,M.GRZECHOWIAK,J.SLIWIAK,P.WORSZTYNOWICZ,J.I.LOCH, JRNL AUTH 2 M.RUSZKOWSKI,M.GILSKI,M.JASKOLSKI JRNL TITL PROBING THE ACTIVE SITE OF CLASS 3 L-ASPARAGINASE BY JRNL TITL 2 MUTAGENESIS. I. TINKERING WITH THE ZINC COORDINATION SITE OF JRNL TITL 3 REAV. JRNL REF FRONT CHEM V. 12 81032 2024 JRNL REFN ESSN 2296-2646 JRNL PMID 38638878 JRNL DOI 10.3389/FCHEM.2024.1381032 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.I.LOCH,M.JASKOLSKI REMARK 1 TITL STRUCTURAL AND BIOPHYSICAL ASPECTS OF L-ASPARAGINASES: A REMARK 1 TITL 2 GROWING FAMILY WITH AMAZING DIVERSITY. REMARK 1 REF IUCRJ V. 8 514 2021 REMARK 1 REFN ESSN 2052-2525 REMARK 1 PMID 34258001 REMARK 1 DOI 10.1107/S2052252521006011 REMARK 1 REFERENCE 2 REMARK 1 AUTH J.I.LOCH,B.IMIOLCZYK,J.SLIWIAK,A.WANTUCH,M.BEJGER,M.GILSKI, REMARK 1 AUTH 2 M.JASKOLSKI REMARK 1 TITL CRYSTAL STRUCTURES OF THE ELUSIVE RHIZOBIUM ETLI REMARK 1 TITL 2 L-ASPARAGINASE REVEAL A PECULIAR ACTIVE SITE. REMARK 1 REF NAT COMMUN V. 12 6717 2021 REMARK 1 REFN ESSN 2041-1723 REMARK 1 PMID 34795296 REMARK 1 DOI 10.1038/S41467-021-27105-X REMARK 1 REFERENCE 3 REMARK 1 AUTH J.I.LOCH,P.WORSZTYNOWICZ,J.SLIWIAK,M.GRZECHOWIAK, REMARK 1 AUTH 2 B.IMIOLCZYK,K.POKRYWKA,M.CHWASTYK,M.GILSKI,M.JASKOLSKI REMARK 1 TITL RHIZOBIUM ETLI HAS TWO L-ASPARAGINASES WITH LOW SEQUENCE REMARK 1 TITL 2 IDENTITY BUT SIMILAR STRUCTURE AND CATALYTIC CENTER. REMARK 1 REF ACTA CRYSTALLOGR D STRUCT V. 79 775 2023 REMARK 1 REF 2 BIOL REMARK 1 REFN ISSN 2059-7983 REMARK 1 PMID 37494066 REMARK 1 DOI 10.1107/S2059798323005648 REMARK 2 REMARK 2 RESOLUTION. 1.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.71 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.84 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 82042 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.250 REMARK 3 FREE R VALUE TEST SET COUNT : 1024 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.8400 - 3.2700 1.00 11980 151 0.1970 0.2016 REMARK 3 2 3.2700 - 2.6000 1.00 11642 147 0.2032 0.2211 REMARK 3 3 2.6000 - 2.2700 1.00 11575 147 0.1872 0.2209 REMARK 3 4 2.2700 - 2.0600 1.00 11496 144 0.1850 0.2468 REMARK 3 5 2.0600 - 1.9100 1.00 11519 146 0.2030 0.2633 REMARK 3 6 1.9100 - 1.8000 1.00 11480 146 0.2280 0.2550 REMARK 3 7 1.8000 - 1.7100 0.99 11326 143 0.2988 0.3238 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.221 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.930 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.16 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 5625 REMARK 3 ANGLE : 1.067 7588 REMARK 3 CHIRALITY : 0.063 838 REMARK 3 PLANARITY : 0.010 1001 REMARK 3 DIHEDRAL : 14.530 2107 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.5093 6.4031 33.3352 REMARK 3 T TENSOR REMARK 3 T11: 0.1800 T22: 0.1647 REMARK 3 T33: 0.1799 T12: -0.0223 REMARK 3 T13: 0.0022 T23: 0.0067 REMARK 3 L TENSOR REMARK 3 L11: 4.6515 L22: 7.8840 REMARK 3 L33: 1.0563 L12: -6.0449 REMARK 3 L13: 1.9517 L23: -2.4348 REMARK 3 S TENSOR REMARK 3 S11: -0.0667 S12: 0.0062 S13: 0.1919 REMARK 3 S21: 0.1269 S22: 0.0474 S23: 0.0781 REMARK 3 S31: -0.1023 S32: 0.0465 S33: 0.0254 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 29 THROUGH 97 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.5422 -12.4010 17.7404 REMARK 3 T TENSOR REMARK 3 T11: 0.2124 T22: 0.2390 REMARK 3 T33: 0.2286 T12: 0.0423 REMARK 3 T13: 0.0394 T23: 0.0416 REMARK 3 L TENSOR REMARK 3 L11: 1.0348 L22: 1.3868 REMARK 3 L33: 1.5220 L12: -0.1150 REMARK 3 L13: -1.0079 L23: 0.7777 REMARK 3 S TENSOR REMARK 3 S11: -0.0492 S12: 0.0420 S13: -0.0583 REMARK 3 S21: -0.1946 S22: 0.0587 S23: -0.2201 REMARK 3 S31: 0.0859 S32: 0.2708 S33: -0.0128 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 98 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.7526 -16.1280 7.2075 REMARK 3 T TENSOR REMARK 3 T11: 0.2866 T22: 0.2234 REMARK 3 T33: 0.2195 T12: 0.0505 REMARK 3 T13: 0.0237 T23: -0.0136 REMARK 3 L TENSOR REMARK 3 L11: 3.1791 L22: 4.1721 REMARK 3 L33: 2.4377 L12: -1.1193 REMARK 3 L13: 1.6686 L23: -2.5198 REMARK 3 S TENSOR REMARK 3 S11: 0.0967 S12: 0.1495 S13: -0.0626 REMARK 3 S21: -0.1933 S22: -0.0076 S23: 0.2142 REMARK 3 S31: -0.0055 S32: -0.0567 S33: -0.0925 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 162 THROUGH 217 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.0626 -17.3339 27.5724 REMARK 3 T TENSOR REMARK 3 T11: 0.2326 T22: 0.2077 REMARK 3 T33: 0.2180 T12: 0.0762 REMARK 3 T13: 0.0142 T23: 0.0584 REMARK 3 L TENSOR REMARK 3 L11: 1.8740 L22: 1.8585 REMARK 3 L33: 1.1721 L12: 0.5076 REMARK 3 L13: 0.1809 L23: 1.0208 REMARK 3 S TENSOR REMARK 3 S11: 0.0639 S12: 0.0233 S13: -0.0213 REMARK 3 S21: 0.0141 S22: -0.1534 S23: -0.2053 REMARK 3 S31: 0.2658 S32: 0.1826 S33: 0.0844 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 218 THROUGH 265 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.8577 -5.4767 18.3949 REMARK 3 T TENSOR REMARK 3 T11: 0.1847 T22: 0.2890 REMARK 3 T33: 0.2537 T12: 0.0123 REMARK 3 T13: 0.0798 T23: 0.0438 REMARK 3 L TENSOR REMARK 3 L11: 3.3601 L22: 4.5425 REMARK 3 L33: 1.2567 L12: -1.2153 REMARK 3 L13: 0.2501 L23: 0.2181 REMARK 3 S TENSOR REMARK 3 S11: -0.0363 S12: -0.1684 S13: -0.0241 REMARK 3 S21: -0.1585 S22: -0.0030 S23: -0.3552 REMARK 3 S31: 0.0115 S32: 0.2972 S33: 0.0392 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 266 THROUGH 314 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.5474 1.4522 29.4835 REMARK 3 T TENSOR REMARK 3 T11: 0.1533 T22: 0.1647 REMARK 3 T33: 0.1621 T12: -0.0003 REMARK 3 T13: 0.0299 T23: 0.0339 REMARK 3 L TENSOR REMARK 3 L11: 5.7143 L22: 2.8189 REMARK 3 L33: 2.2442 L12: 0.1047 REMARK 3 L13: 0.4941 L23: 0.4556 REMARK 3 S TENSOR REMARK 3 S11: 0.0233 S12: -0.1902 S13: 0.1008 REMARK 3 S21: 0.0296 S22: 0.0022 S23: -0.2121 REMARK 3 S31: -0.0235 S32: 0.1795 S33: -0.0210 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 315 THROUGH 353 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.8774 12.7687 25.5199 REMARK 3 T TENSOR REMARK 3 T11: 0.1970 T22: 0.1599 REMARK 3 T33: 0.3374 T12: -0.0184 REMARK 3 T13: -0.0026 T23: 0.0247 REMARK 3 L TENSOR REMARK 3 L11: 2.2568 L22: 1.8987 REMARK 3 L33: 2.7607 L12: -0.1527 REMARK 3 L13: 0.0164 L23: -0.9205 REMARK 3 S TENSOR REMARK 3 S11: 0.0113 S12: 0.0605 S13: 0.3215 REMARK 3 S21: 0.0157 S22: -0.0181 S23: -0.1948 REMARK 3 S31: 0.0210 S32: 0.1687 S33: 0.0314 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -3 THROUGH 46 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.2694 0.2016 36.2659 REMARK 3 T TENSOR REMARK 3 T11: 0.1724 T22: 0.1843 REMARK 3 T33: 0.1546 T12: -0.0182 REMARK 3 T13: 0.0071 T23: -0.0138 REMARK 3 L TENSOR REMARK 3 L11: 2.2636 L22: 3.0888 REMARK 3 L33: 1.1538 L12: -0.8674 REMARK 3 L13: -0.1064 L23: 0.1032 REMARK 3 S TENSOR REMARK 3 S11: -0.0291 S12: -0.1529 S13: -0.1210 REMARK 3 S21: 0.3203 S22: -0.0608 S23: 0.0446 REMARK 3 S31: 0.0162 S32: -0.1232 S33: 0.1000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 47 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.7192 19.8507 9.2501 REMARK 3 T TENSOR REMARK 3 T11: 0.2482 T22: 0.2209 REMARK 3 T33: 0.1974 T12: 0.0670 REMARK 3 T13: 0.0091 T23: 0.0165 REMARK 3 L TENSOR REMARK 3 L11: 2.3972 L22: 2.2203 REMARK 3 L33: 1.5324 L12: -0.7393 REMARK 3 L13: -1.2717 L23: 0.4226 REMARK 3 S TENSOR REMARK 3 S11: 0.1639 S12: 0.2243 S13: 0.0643 REMARK 3 S21: -0.3396 S22: -0.1000 S23: -0.1951 REMARK 3 S31: -0.0136 S32: 0.1513 S33: -0.0615 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 162 THROUGH 237 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.3695 19.3553 26.1360 REMARK 3 T TENSOR REMARK 3 T11: 0.2124 T22: 0.2262 REMARK 3 T33: 0.2428 T12: 0.0504 REMARK 3 T13: 0.0078 T23: -0.0131 REMARK 3 L TENSOR REMARK 3 L11: 1.4458 L22: 1.5969 REMARK 3 L33: 0.8947 L12: -0.1312 REMARK 3 L13: 0.4818 L23: -0.2932 REMARK 3 S TENSOR REMARK 3 S11: 0.0252 S12: -0.0786 S13: 0.1098 REMARK 3 S21: -0.0329 S22: -0.0450 S23: 0.1218 REMARK 3 S31: -0.0568 S32: -0.2323 S33: 0.0256 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 238 THROUGH 329 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.6536 1.1353 23.1675 REMARK 3 T TENSOR REMARK 3 T11: 0.1675 T22: 0.1639 REMARK 3 T33: 0.2190 T12: -0.0202 REMARK 3 T13: -0.0116 T23: -0.0115 REMARK 3 L TENSOR REMARK 3 L11: 1.3339 L22: 1.8678 REMARK 3 L33: 1.4255 L12: -0.7058 REMARK 3 L13: 0.1142 L23: -0.3747 REMARK 3 S TENSOR REMARK 3 S11: -0.0122 S12: 0.0346 S13: -0.1780 REMARK 3 S21: -0.1782 S22: 0.0061 S23: 0.2725 REMARK 3 S31: 0.2009 S32: -0.1777 S33: 0.0167 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 330 THROUGH 367 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.4545 -7.6611 33.3185 REMARK 3 T TENSOR REMARK 3 T11: 0.2702 T22: 0.1753 REMARK 3 T33: 0.3084 T12: 0.0052 REMARK 3 T13: -0.0201 T23: 0.0333 REMARK 3 L TENSOR REMARK 3 L11: 3.9491 L22: 2.7801 REMARK 3 L33: 3.2236 L12: -2.3241 REMARK 3 L13: -3.0386 L23: 2.8159 REMARK 3 S TENSOR REMARK 3 S11: 0.0302 S12: 0.0890 S13: -0.1869 REMARK 3 S21: 0.1173 S22: -0.2407 S23: 0.0328 REMARK 3 S31: -0.1626 S32: -0.3745 S33: 0.2643 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGEN ATOMS WERE ADDED AT RIDING REMARK 3 POSITION. REMARK 4 REMARK 4 8RUA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-JAN-24. REMARK 100 THE DEPOSITION ID IS D_1292135432. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-OCT-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 82131 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.710 REMARK 200 RESOLUTION RANGE LOW (A) : 78.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 12.20 REMARK 200 R MERGE (I) : 0.12200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.8900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.71 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.88300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.540 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 4000, 0.2 M LI2SO4, 0.1 M TRIS REMARK 280 PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.03200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.02450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.58900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.02450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.03200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.58900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -5 REMARK 465 ILE A -4 REMARK 465 ASP A -3 REMARK 465 PRO A -2 REMARK 465 PHE A -1 REMARK 465 THR A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 PRO A 3 REMARK 465 LYS A 354 REMARK 465 SER A 355 REMARK 465 ASN A 356 REMARK 465 VAL A 357 REMARK 465 ASP A 358 REMARK 465 ASP A 359 REMARK 465 PRO A 360 REMARK 465 ARG A 361 REMARK 465 LEU A 362 REMARK 465 ALA A 363 REMARK 465 ALA A 364 REMARK 465 VAL A 365 REMARK 465 ALA A 366 REMARK 465 ARG A 367 REMARK 465 GLY B -5 REMARK 465 ILE B -4 REMARK 465 SER B 353 REMARK 465 LYS B 354 REMARK 465 SER B 355 REMARK 465 ASN B 356 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 17 -74.04 -97.08 REMARK 500 ARG A 47 -132.15 48.76 REMARK 500 SER A 80 76.23 -119.99 REMARK 500 THR A 129 -167.35 -118.20 REMARK 500 ASN A 190 17.44 80.20 REMARK 500 ALA A 243 -87.74 -145.15 REMARK 500 ALA A 268 51.25 71.47 REMARK 500 GLU B 17 -76.87 -94.80 REMARK 500 ARG B 47 -136.18 50.32 REMARK 500 SER B 80 78.90 -111.48 REMARK 500 ALA B 243 -86.99 -142.84 REMARK 500 ALA B 268 54.45 75.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 714 DISTANCE = 5.96 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7OS3 RELATED DB: PDB REMARK 900 RELATED ID: 7OS5 RELATED DB: PDB REMARK 900 RELATED ID: 7OS6 RELATED DB: PDB REMARK 900 RELATED ID: 7OU1 RELATED DB: PDB REMARK 900 RELATED ID: 7OZ6 RELATED DB: PDB REMARK 900 RELATED ID: 8OSW RELATED DB: PDB REMARK 900 RELATED ID: 8CLZ RELATED DB: PDB REMARK 900 RELATED ID: 8CLY RELATED DB: PDB REMARK 900 RELATED ID: 8ORI RELATED DB: PDB REMARK 900 RELATED ID: 8COL RELATED DB: PDB DBREF 8RUA A 1 367 UNP Q2K0Z2 Q2K0Z2_RHIEC 1 367 DBREF 8RUA B 1 367 UNP Q2K0Z2 Q2K0Z2_RHIEC 1 367 SEQADV 8RUA GLY A -5 UNP Q2K0Z2 EXPRESSION TAG SEQADV 8RUA ILE A -4 UNP Q2K0Z2 EXPRESSION TAG SEQADV 8RUA ASP A -3 UNP Q2K0Z2 EXPRESSION TAG SEQADV 8RUA PRO A -2 UNP Q2K0Z2 EXPRESSION TAG SEQADV 8RUA PHE A -1 UNP Q2K0Z2 EXPRESSION TAG SEQADV 8RUA THR A 0 UNP Q2K0Z2 EXPRESSION TAG SEQADV 8RUA ALA A 135 UNP Q2K0Z2 CYS 135 ENGINEERED MUTATION SEQADV 8RUA GLY B -5 UNP Q2K0Z2 EXPRESSION TAG SEQADV 8RUA ILE B -4 UNP Q2K0Z2 EXPRESSION TAG SEQADV 8RUA ASP B -3 UNP Q2K0Z2 EXPRESSION TAG SEQADV 8RUA PRO B -2 UNP Q2K0Z2 EXPRESSION TAG SEQADV 8RUA PHE B -1 UNP Q2K0Z2 EXPRESSION TAG SEQADV 8RUA THR B 0 UNP Q2K0Z2 EXPRESSION TAG SEQADV 8RUA ALA B 135 UNP Q2K0Z2 CYS 135 ENGINEERED MUTATION SEQRES 1 A 373 GLY ILE ASP PRO PHE THR MET THR PRO SER GLU ASP PHE SEQRES 2 A 373 VAL VAL THR ASP ARG GLY GLY ILE VAL GLU ASN SER HIS SEQRES 3 A 373 ARG VAL HIS ALA ALA VAL VAL ASP ALA LYS GLY ARG LEU SEQRES 4 A 373 LEU TYR ALA LEU GLY ASN PRO THR ARG MET THR LEU ALA SEQRES 5 A 373 ARG SER ALA ALA LYS PRO ALA GLN ALA LEU ALA ILE LEU SEQRES 6 A 373 GLU THR GLU GLY VAL ALA GLY TYR GLY PHE ASP ASP ALA SEQRES 7 A 373 ASP ILE ALA LEU MET CYS ALA SER HIS SER SER GLU ASP SEQRES 8 A 373 ARG HIS ILE ALA ARG THR ARG ALA MET LEU SER LYS ILE SEQRES 9 A 373 LYS ALA GLU GLU ALA ASP LEU ARG CYS GLY GLY HIS PRO SEQRES 10 A 373 SER LEU SER GLU MET VAL ASN ARG SER TRP ILE LYS GLN SEQRES 11 A 373 ASP PHE ILE PRO THR ALA VAL CYS SER ASN ALA SER GLY SEQRES 12 A 373 LYS HIS VAL GLY MET LEU ALA GLY ALA ARG ALA ILE GLY SEQRES 13 A 373 ALA GLY THR ASP GLY TYR HIS LEU PRO ASP HIS PRO MET SEQRES 14 A 373 GLN GLY ARG VAL LYS ARG THR VAL ALA GLU LEU CYS ASP SEQRES 15 A 373 LEU ASP ALA GLY ASP VAL GLU TRP GLY THR ASP GLY CYS SEQRES 16 A 373 ASN LEU PRO THR PRO ALA PHE PRO LEU ASP ARG LEU GLY SEQRES 17 A 373 ARG ILE TYR ALA LYS LEU ALA SER ALA ALA ASP GLY SER SEQRES 18 A 373 ASP ALA GLY GLU GLY GLN SER THR ARG CYS ALA ALA LEU SEQRES 19 A 373 ALA HIS ILE PHE ARG ALA MET ALA ARG HIS PRO GLU MET SEQRES 20 A 373 VAL ALA GLY GLU GLY ARG TYR CYS THR MET LEU MET ARG SEQRES 21 A 373 ALA PHE ASP GLY ALA LEU VAL GLY LYS LEU GLY ALA ASP SEQRES 22 A 373 ALA SER TYR ALA ILE GLY VAL ARG ALA SER ASP ALA THR SEQRES 23 A 373 ARG GLN LEU GLY THR ASP GLY ALA LEU GLY ILE SER VAL SEQRES 24 A 373 LYS ILE GLU ASP GLY ASN LEU GLU MET LEU TYR ALA VAL SEQRES 25 A 373 VAL THR GLU LEU LEU GLU ARG LEU GLY ILE GLY SER PRO SEQRES 26 A 373 ASP VAL ARG SER GLN LEU ALA SER PHE HIS HIS PRO GLN SEQRES 27 A 373 ARG VAL ASN THR MET GLY VAL THR THR GLY GLY VAL SER SEQRES 28 A 373 PHE PRO PHE LYS LEU ARG GLY SER LYS SER ASN VAL ASP SEQRES 29 A 373 ASP PRO ARG LEU ALA ALA VAL ALA ARG SEQRES 1 B 373 GLY ILE ASP PRO PHE THR MET THR PRO SER GLU ASP PHE SEQRES 2 B 373 VAL VAL THR ASP ARG GLY GLY ILE VAL GLU ASN SER HIS SEQRES 3 B 373 ARG VAL HIS ALA ALA VAL VAL ASP ALA LYS GLY ARG LEU SEQRES 4 B 373 LEU TYR ALA LEU GLY ASN PRO THR ARG MET THR LEU ALA SEQRES 5 B 373 ARG SER ALA ALA LYS PRO ALA GLN ALA LEU ALA ILE LEU SEQRES 6 B 373 GLU THR GLU GLY VAL ALA GLY TYR GLY PHE ASP ASP ALA SEQRES 7 B 373 ASP ILE ALA LEU MET CYS ALA SER HIS SER SER GLU ASP SEQRES 8 B 373 ARG HIS ILE ALA ARG THR ARG ALA MET LEU SER LYS ILE SEQRES 9 B 373 LYS ALA GLU GLU ALA ASP LEU ARG CYS GLY GLY HIS PRO SEQRES 10 B 373 SER LEU SER GLU MET VAL ASN ARG SER TRP ILE LYS GLN SEQRES 11 B 373 ASP PHE ILE PRO THR ALA VAL CYS SER ASN ALA SER GLY SEQRES 12 B 373 LYS HIS VAL GLY MET LEU ALA GLY ALA ARG ALA ILE GLY SEQRES 13 B 373 ALA GLY THR ASP GLY TYR HIS LEU PRO ASP HIS PRO MET SEQRES 14 B 373 GLN GLY ARG VAL LYS ARG THR VAL ALA GLU LEU CYS ASP SEQRES 15 B 373 LEU ASP ALA GLY ASP VAL GLU TRP GLY THR ASP GLY CYS SEQRES 16 B 373 ASN LEU PRO THR PRO ALA PHE PRO LEU ASP ARG LEU GLY SEQRES 17 B 373 ARG ILE TYR ALA LYS LEU ALA SER ALA ALA ASP GLY SER SEQRES 18 B 373 ASP ALA GLY GLU GLY GLN SER THR ARG CYS ALA ALA LEU SEQRES 19 B 373 ALA HIS ILE PHE ARG ALA MET ALA ARG HIS PRO GLU MET SEQRES 20 B 373 VAL ALA GLY GLU GLY ARG TYR CYS THR MET LEU MET ARG SEQRES 21 B 373 ALA PHE ASP GLY ALA LEU VAL GLY LYS LEU GLY ALA ASP SEQRES 22 B 373 ALA SER TYR ALA ILE GLY VAL ARG ALA SER ASP ALA THR SEQRES 23 B 373 ARG GLN LEU GLY THR ASP GLY ALA LEU GLY ILE SER VAL SEQRES 24 B 373 LYS ILE GLU ASP GLY ASN LEU GLU MET LEU TYR ALA VAL SEQRES 25 B 373 VAL THR GLU LEU LEU GLU ARG LEU GLY ILE GLY SER PRO SEQRES 26 B 373 ASP VAL ARG SER GLN LEU ALA SER PHE HIS HIS PRO GLN SEQRES 27 B 373 ARG VAL ASN THR MET GLY VAL THR THR GLY GLY VAL SER SEQRES 28 B 373 PHE PRO PHE LYS LEU ARG GLY SER LYS SER ASN VAL ASP SEQRES 29 B 373 ASP PRO ARG LEU ALA ALA VAL ALA ARG HET TRS A 401 8 HET PEG A 402 7 HET GOL A 403 6 HET GOL A 404 6 HET EDO A 405 4 HET EDO A 406 4 HET PEG A 407 7 HET GOL A 408 6 HET GOL A 409 6 HET GOL A 410 6 HET EDO A 411 4 HET PEG B 401 7 HET GOL B 402 6 HET EDO B 403 4 HET GOL B 404 6 HET EDO B 405 4 HET GOL B 406 6 HET EDO B 407 4 HET CL B 408 1 HET EDO B 409 4 HET GOL B 410 6 HET EDO B 411 4 HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETSYN TRS TRIS BUFFER HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 TRS C4 H12 N O3 1+ FORMUL 4 PEG 3(C4 H10 O3) FORMUL 5 GOL 9(C3 H8 O3) FORMUL 7 EDO 8(C2 H6 O2) FORMUL 21 CL CL 1- FORMUL 25 HOH *440(H2 O) HELIX 1 AA1 ARG A 47 ALA A 49 5 3 HELIX 2 AA2 ALA A 50 GLU A 60 1 11 HELIX 3 AA3 GLY A 63 GLY A 68 5 6 HELIX 4 AA4 ASP A 70 CYS A 78 1 9 HELIX 5 AA5 GLU A 84 ILE A 98 1 15 HELIX 6 AA6 GLU A 101 LEU A 105 5 5 HELIX 7 AA7 SER A 114 GLN A 124 1 11 HELIX 8 AA8 THR A 129 SER A 133 5 5 HELIX 9 AA9 ALA A 135 ILE A 149 1 15 HELIX 10 AB1 HIS A 161 ASP A 176 1 16 HELIX 11 AB2 ASP A 178 VAL A 182 5 5 HELIX 12 AB3 LEU A 198 ASP A 216 1 19 HELIX 13 AB4 SER A 222 HIS A 238 1 17 HELIX 14 AB5 HIS A 238 ALA A 243 1 6 HELIX 15 AB6 ARG A 247 ASP A 257 1 11 HELIX 16 AB7 SER A 277 LEU A 283 1 7 HELIX 17 AB8 ASN A 299 GLY A 315 1 17 HELIX 18 AB9 SER A 318 GLN A 324 1 7 HELIX 19 AC1 LEU A 325 HIS A 330 1 6 HELIX 20 AC2 THR B 2 GLU B 5 5 4 HELIX 21 AC3 ARG B 47 ALA B 49 5 3 HELIX 22 AC4 ALA B 50 GLU B 60 1 11 HELIX 23 AC5 GLY B 63 GLY B 68 5 6 HELIX 24 AC6 ASP B 70 CYS B 78 1 9 HELIX 25 AC7 GLU B 84 ILE B 98 1 15 HELIX 26 AC8 GLU B 101 LEU B 105 5 5 HELIX 27 AC9 SER B 114 GLN B 124 1 11 HELIX 28 AD1 THR B 129 SER B 133 5 5 HELIX 29 AD2 ALA B 135 ILE B 149 1 15 HELIX 30 AD3 HIS B 161 ASP B 176 1 16 HELIX 31 AD4 ASP B 178 VAL B 182 5 5 HELIX 32 AD5 LEU B 198 GLY B 218 1 21 HELIX 33 AD6 SER B 222 HIS B 238 1 17 HELIX 34 AD7 HIS B 238 ALA B 243 1 6 HELIX 35 AD8 ARG B 247 ASP B 257 1 11 HELIX 36 AD9 SER B 277 LEU B 283 1 7 HELIX 37 AE1 ASN B 299 LEU B 314 1 16 HELIX 38 AE2 SER B 318 SER B 323 1 6 HELIX 39 AE3 LEU B 325 HIS B 330 1 6 SHEET 1 AA1 6 LEU A 260 GLY A 265 0 SHEET 2 AA1 6 SER A 269 VAL A 274 -1 O SER A 269 N GLY A 265 SHEET 3 AA1 6 LEU A 289 ILE A 295 -1 O LEU A 289 N VAL A 274 SHEET 4 AA1 6 ILE A 15 ASP A 28 -1 N VAL A 27 O GLY A 290 SHEET 5 AA1 6 PHE A 7 ARG A 12 -1 N THR A 10 O GLU A 17 SHEET 6 AA1 6 GLY A 342 SER A 345 -1 O SER A 345 N VAL A 9 SHEET 1 AA2 6 LEU A 260 GLY A 265 0 SHEET 2 AA2 6 SER A 269 VAL A 274 -1 O SER A 269 N GLY A 265 SHEET 3 AA2 6 LEU A 289 ILE A 295 -1 O LEU A 289 N VAL A 274 SHEET 4 AA2 6 ILE A 15 ASP A 28 -1 N VAL A 27 O GLY A 290 SHEET 5 AA2 6 LEU A 33 LEU A 37 -1 O LEU A 34 N VAL A 26 SHEET 6 AA2 6 ARG A 351 GLY A 352 -1 O ARG A 351 N ALA A 36 SHEET 1 AA3 3 MET A 43 LEU A 45 0 SHEET 2 AA3 3 PRO A 192 PRO A 197 -1 O PHE A 196 N THR A 44 SHEET 3 AA3 3 GLU A 183 THR A 186 -1 N GLU A 183 O ALA A 195 SHEET 1 AA4 5 LEU B 33 LEU B 37 0 SHEET 2 AA4 5 ILE B 15 ASP B 28 -1 N VAL B 26 O LEU B 34 SHEET 3 AA4 5 LEU B 289 ILE B 295 -1 O GLY B 290 N VAL B 27 SHEET 4 AA4 5 SER B 269 VAL B 274 -1 N VAL B 274 O LEU B 289 SHEET 5 AA4 5 LEU B 260 GLY B 265 -1 N GLY B 265 O SER B 269 SHEET 1 AA5 4 LEU B 33 LEU B 37 0 SHEET 2 AA5 4 ILE B 15 ASP B 28 -1 N VAL B 26 O LEU B 34 SHEET 3 AA5 4 PHE B 7 ARG B 12 -1 N THR B 10 O GLU B 17 SHEET 4 AA5 4 GLY B 342 SER B 345 -1 O SER B 345 N VAL B 9 SHEET 1 AA6 3 MET B 43 LEU B 45 0 SHEET 2 AA6 3 PRO B 192 PRO B 197 -1 O PHE B 196 N THR B 44 SHEET 3 AA6 3 GLU B 183 THR B 186 -1 N GLU B 183 O ALA B 195 CRYST1 78.064 91.178 106.049 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012810 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010968 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009430 0.00000