HEADER TRANSFERASE 05-FEB-24 8RWM TITLE CRYSTAL STRUCTURE OF SELENOMETHIONINE DERIVATIZED ALPHA KETO ACID C- TITLE 2 METHYL-TRANSFERASES MRSA COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2-KETOARGININE METHYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS SYRINGAE; SOURCE 3 ORGANISM_TAXID: 317; SOURCE 4 GENE: MRSA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21-GOLD ((DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-28B (+) KEYWDS S ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASES, BIOCATALYSIS, C- KEYWDS 2 ALKYLATION, ASYMMETRIC METHYLATION, MUTAGENESIS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.GERHARDT,J.N.ANDEXER REVDAT 3 16-OCT-24 8RWM 1 JRNL REVDAT 2 24-JUL-24 8RWM 1 JRNL REVDAT 1 03-JUL-24 8RWM 0 JRNL AUTH C.SOMMER-KAMANN,J.BREILTGENS,Z.ZOU,S.GERHARDT, JRNL AUTH 2 R.SALEEM-BATCHA,F.KEMPER,O.EINSLE,J.N.ANDEXER,M.MULLER JRNL TITL STRUCTURES AND PROTEIN ENGINEERING OF THE ALPHA-KETO ACID JRNL TITL 2 C-METHYLTRANSFERASES SGVM AND MRSA FOR RATIONAL SUBSTRATE JRNL TITL 3 TRANSFER. JRNL REF CHEMBIOCHEM V. 25 00258 2024 JRNL REFN ESSN 1439-7633 JRNL PMID 38887142 JRNL DOI 10.1002/CBIC.202400258 REMARK 2 REMARK 2 RESOLUTION. 1.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.4 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 74.82 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 89019 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 4467 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.64 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.66 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.25 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2655 REMARK 3 BIN FREE R VALUE : 0.3329 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 95 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5316 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 1001 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.33160 REMARK 3 B22 (A**2) : -2.79100 REMARK 3 B33 (A**2) : 2.45940 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.180 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.092 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.085 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.101 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.080 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 10692 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 19318 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 3161 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 1727 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 10692 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 695 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : 1 ; 1.000 ; HARMONIC REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 10493 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.01 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.88 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 15.03 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 61.1691 -12.7461 39.2164 REMARK 3 T TENSOR REMARK 3 T11: 0.0048 T22: -0.0152 REMARK 3 T33: 0.0021 T12: -0.0124 REMARK 3 T13: 0.0224 T23: -0.01 REMARK 3 L TENSOR REMARK 3 L11: 0.6089 L22: 0.4042 REMARK 3 L33: 0.5718 L12: -0.0729 REMARK 3 L13: -0.0384 L23: 0.1441 REMARK 3 S TENSOR REMARK 3 S11: -0.0627 S12: 0.0019 S13: 0.1155 REMARK 3 S21: 0.0019 S22: -0.0084 S23: -0.0751 REMARK 3 S31: 0.1155 S32: -0.0751 S33: 0.0711 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 58.1059 8.4783 2.9412 REMARK 3 T TENSOR REMARK 3 T11: -0.02 T22: 0.0232 REMARK 3 T33: -0.019 T12: 0.0294 REMARK 3 T13: -0.0077 T23: 0.0013 REMARK 3 L TENSOR REMARK 3 L11: 0.2387 L22: 0.2297 REMARK 3 L33: 0.3241 L12: -0.0482 REMARK 3 L13: -0.08 L23: 0.1048 REMARK 3 S TENSOR REMARK 3 S11: -0.0233 S12: 0.0073 S13: -0.0081 REMARK 3 S21: 0.0073 S22: 0.0073 S23: -0.0324 REMARK 3 S31: -0.0081 S32: -0.0324 S33: 0.016 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8RWM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-FEB-24. REMARK 100 THE DEPOSITION ID IS D_1292136385. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAY-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97943 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 89187 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.640 REMARK 200 RESOLUTION RANGE LOW (A) : 74.820 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 48.70 REMARK 200 R MERGE (I) : 0.16400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 29.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL2MAP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES PH 7.5, 300 MM NACL, 28% REMARK 280 PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 73.92350 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.76550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 73.92350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.76550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 147.84700 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 -74.82300 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 147.84700 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 -74.82300 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 21 REMARK 465 ASN A 22 REMARK 465 LEU A 23 REMARK 465 LEU A 24 REMARK 465 ASP A 25 REMARK 465 SER A 26 REMARK 465 ILE A 27 REMARK 465 LYS A 28 REMARK 465 SER A 29 REMARK 465 MSE B 21 REMARK 465 ASN B 22 REMARK 465 LEU B 23 REMARK 465 LEU B 24 REMARK 465 ASP B 25 REMARK 465 SER B 26 REMARK 465 ILE B 27 REMARK 465 LYS B 28 REMARK 465 SER B 29 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 30 CG CD OE1 OE2 REMARK 470 GLU B 30 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE22 GLN A 178 OE2 GLU A 350 1.47 REMARK 500 HE22 GLN B 178 OE2 GLU B 350 1.49 REMARK 500 O HOH B 503 O HOH B 820 1.92 REMARK 500 O HOH A 1140 O HOH A 1288 1.95 REMARK 500 O HOH B 507 O HOH B 508 2.09 REMARK 500 O HOH A 1102 O HOH A 1470 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1283 O HOH B 656 1554 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 70 -55.22 77.82 REMARK 500 ASP A 249 33.62 -88.64 REMARK 500 GLU A 253 78.17 -116.54 REMARK 500 GLU B 70 -53.96 76.97 REMARK 500 VAL B 128 -61.84 -91.00 REMARK 500 ASP B 249 42.96 -89.44 REMARK 500 GLU B 253 79.19 -116.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 196 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1636 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH B 963 DISTANCE = 6.46 ANGSTROMS REMARK 525 HOH B 964 DISTANCE = 6.63 ANGSTROMS REMARK 525 HOH B 965 DISTANCE = 6.76 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1002 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 322 O REMARK 620 2 THR A 325 O 91.8 REMARK 620 3 GLN A 327 O 73.0 99.3 REMARK 620 4 HOH A1511 O 100.5 140.4 120.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1001 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 327 OE1 REMARK 620 2 HOH A1112 O 161.1 REMARK 620 3 HOH A1122 O 91.0 75.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 402 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 322 O REMARK 620 2 THR B 325 O 94.3 REMARK 620 3 GLN B 327 O 72.8 99.8 REMARK 620 4 HOH B 733 O 150.8 96.1 78.5 REMARK 620 5 HOH B 880 O 101.4 141.3 118.6 87.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 546 O REMARK 620 2 HOH B 666 O 77.3 REMARK 620 N 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8R4Z RELATED DB: PDB REMARK 900 8R4Z EXHIBITS THE APO STRUCTURE DBREF 8RWM A 21 370 UNP D5FKJ3 MRSA_PSESY 1 350 DBREF 8RWM B 21 370 UNP D5FKJ3 MRSA_PSESY 1 350 SEQRES 1 A 350 MSE ASN LEU LEU ASP SER ILE LYS SER GLU ASN THR GLY SEQRES 2 A 350 PHE GLU THR THR LEU ILE LYS GLY ILE GLU PRO ILE ARG SEQRES 3 A 350 GLN PHE VAL LEU ALA ILE SER ILE TYR HIS LEU PHE ASP SEQRES 4 A 350 THR LYS LEU PHE SER LEU LEU ILE LYS HIS GLU VAL ALA SEQRES 5 A 350 SER PRO GLU VAL ALA CYS ASN GLU LEU GLY MSE GLU LYS SEQRES 6 A 350 GLU LYS LEU LEU GLY LEU PHE ARG TYR LEU LYS ASN GLU SEQRES 7 A 350 GLY ILE LEU LEU GLU THR ILE ASP GLY PHE SER LEU SER SEQRES 8 A 350 LYS GLU GLY HIS ALA LEU ALA PRO PHE GLU GLY TRP TYR SEQRES 9 A 350 VAL MSE LEU VAL GLY GLY TYR ALA THR THR PHE LEU GLN SEQRES 10 A 350 MSE GLY GLU ARG LEU GLN GLU GLY ALA GLY TRP ALA THR SEQRES 11 A 350 ARG ASP ALA THR LYS VAL GLY VAL GLY SER CYS GLY ILE SEQRES 12 A 350 SER HIS PHE ASP ALA ILE PRO LEU THR ARG SER LEU MSE SEQRES 13 A 350 ALA GLN ALA PRO GLY THR CYS THR LYS LEU LEU ASP LEU SEQRES 14 A 350 GLY CYS GLY ASN GLY ARG TYR LEU ALA GLU PHE CYS LYS SEQRES 15 A 350 ALA LEU PRO GLN ILE GLN ALA TRP GLY ALA GLU PRO ASP SEQRES 16 A 350 ARG GLY GLY PHE GLU GLU ALA VAL ASP LEU ILE GLU LYS SEQRES 17 A 350 GLU GLY LEU SER HIS ARG VAL HIS ILE SER HIS SER GLY SEQRES 18 A 350 ALA VAL GLU PHE LEU ASP SER ASP PHE ASP PHE GLU PRO SEQRES 19 A 350 ASP PHE ILE VAL LEU GLY PHE VAL LEU HIS GLU ILE LEU SEQRES 20 A 350 GLY GLN ALA GLY ARG PRO ALA VAL VAL ASN PHE LEU LYS SEQRES 21 A 350 LYS ILE VAL HIS ARG PHE PRO ALA ILE ASN LEU ILE ILE SEQRES 22 A 350 ILE GLU VAL ASP ASN GLN PHE ASP ASN ALA GLY ALA MSE SEQRES 23 A 350 ARG HIS GLY LEU ALA LEU ALA TYR TYR ASN PRO TYR TYR SEQRES 24 A 350 LEU LEU HIS CYS PHE THR ASN GLN LEU LEU VAL GLN ASP SEQRES 25 A 350 ALA ASP TRP LEU ASP ILE PHE ALA GLU ALA GLY LEU SER SEQRES 26 A 350 LEU VAL THR ARG GLU THR THR SER ASP GLN VAL ASP SER SEQRES 27 A 350 THR GLY LEU GLU ILE GLY TYR LEU LEU ARG ARG ALA SEQRES 1 B 350 MSE ASN LEU LEU ASP SER ILE LYS SER GLU ASN THR GLY SEQRES 2 B 350 PHE GLU THR THR LEU ILE LYS GLY ILE GLU PRO ILE ARG SEQRES 3 B 350 GLN PHE VAL LEU ALA ILE SER ILE TYR HIS LEU PHE ASP SEQRES 4 B 350 THR LYS LEU PHE SER LEU LEU ILE LYS HIS GLU VAL ALA SEQRES 5 B 350 SER PRO GLU VAL ALA CYS ASN GLU LEU GLY MSE GLU LYS SEQRES 6 B 350 GLU LYS LEU LEU GLY LEU PHE ARG TYR LEU LYS ASN GLU SEQRES 7 B 350 GLY ILE LEU LEU GLU THR ILE ASP GLY PHE SER LEU SER SEQRES 8 B 350 LYS GLU GLY HIS ALA LEU ALA PRO PHE GLU GLY TRP TYR SEQRES 9 B 350 VAL MSE LEU VAL GLY GLY TYR ALA THR THR PHE LEU GLN SEQRES 10 B 350 MSE GLY GLU ARG LEU GLN GLU GLY ALA GLY TRP ALA THR SEQRES 11 B 350 ARG ASP ALA THR LYS VAL GLY VAL GLY SER CYS GLY ILE SEQRES 12 B 350 SER HIS PHE ASP ALA ILE PRO LEU THR ARG SER LEU MSE SEQRES 13 B 350 ALA GLN ALA PRO GLY THR CYS THR LYS LEU LEU ASP LEU SEQRES 14 B 350 GLY CYS GLY ASN GLY ARG TYR LEU ALA GLU PHE CYS LYS SEQRES 15 B 350 ALA LEU PRO GLN ILE GLN ALA TRP GLY ALA GLU PRO ASP SEQRES 16 B 350 ARG GLY GLY PHE GLU GLU ALA VAL ASP LEU ILE GLU LYS SEQRES 17 B 350 GLU GLY LEU SER HIS ARG VAL HIS ILE SER HIS SER GLY SEQRES 18 B 350 ALA VAL GLU PHE LEU ASP SER ASP PHE ASP PHE GLU PRO SEQRES 19 B 350 ASP PHE ILE VAL LEU GLY PHE VAL LEU HIS GLU ILE LEU SEQRES 20 B 350 GLY GLN ALA GLY ARG PRO ALA VAL VAL ASN PHE LEU LYS SEQRES 21 B 350 LYS ILE VAL HIS ARG PHE PRO ALA ILE ASN LEU ILE ILE SEQRES 22 B 350 ILE GLU VAL ASP ASN GLN PHE ASP ASN ALA GLY ALA MSE SEQRES 23 B 350 ARG HIS GLY LEU ALA LEU ALA TYR TYR ASN PRO TYR TYR SEQRES 24 B 350 LEU LEU HIS CYS PHE THR ASN GLN LEU LEU VAL GLN ASP SEQRES 25 B 350 ALA ASP TRP LEU ASP ILE PHE ALA GLU ALA GLY LEU SER SEQRES 26 B 350 LEU VAL THR ARG GLU THR THR SER ASP GLN VAL ASP SER SEQRES 27 B 350 THR GLY LEU GLU ILE GLY TYR LEU LEU ARG ARG ALA MODRES 8RWM MSE A 83 MET MODIFIED RESIDUE MODRES 8RWM MSE A 126 MET MODIFIED RESIDUE MODRES 8RWM MSE A 138 MET MODIFIED RESIDUE MODRES 8RWM MSE A 176 MET MODIFIED RESIDUE MODRES 8RWM MSE A 306 MET MODIFIED RESIDUE MODRES 8RWM MSE B 83 MET MODIFIED RESIDUE MODRES 8RWM MSE B 126 MET MODIFIED RESIDUE MODRES 8RWM MSE B 138 MET MODIFIED RESIDUE MODRES 8RWM MSE B 176 MET MODIFIED RESIDUE MODRES 8RWM MSE B 306 MET MODIFIED RESIDUE HET MSE A 83 17 HET MSE A 126 17 HET MSE A 138 17 HET MSE A 176 17 HET MSE A 306 17 HET MSE B 83 17 HET MSE B 126 17 HET MSE B 138 17 HET MSE B 176 17 HET MSE B 306 17 HET MG A1001 1 HET MG A1002 1 HET MG B 401 1 HET NA B 402 1 HETNAM MSE SELENOMETHIONINE HETNAM MG MAGNESIUM ION HETNAM NA SODIUM ION FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 3 MG 3(MG 2+) FORMUL 6 NA NA 1+ FORMUL 7 HOH *1001(H2 O) HELIX 1 AA1 GLY A 33 ILE A 42 1 10 HELIX 2 AA2 ILE A 42 THR A 60 1 19 HELIX 3 AA3 LYS A 61 GLU A 70 1 10 HELIX 4 AA4 SER A 73 GLY A 82 1 10 HELIX 5 AA5 GLU A 84 GLU A 98 1 15 HELIX 6 AA6 SER A 111 LEU A 117 1 7 HELIX 7 AA7 PHE A 120 VAL A 128 1 9 HELIX 8 AA8 TYR A 131 GLN A 137 1 7 HELIX 9 AA9 GLN A 137 LEU A 142 1 6 HELIX 10 AB1 ASP A 152 HIS A 165 1 14 HELIX 11 AB2 ASP A 167 GLN A 178 1 12 HELIX 12 AB3 GLY A 194 LEU A 204 1 11 HELIX 13 AB4 ASP A 215 GLU A 229 1 15 HELIX 14 AB5 GLY A 241 SER A 248 1 8 HELIX 15 AB6 VAL A 262 GLY A 271 1 10 HELIX 16 AB7 GLY A 271 PHE A 286 1 16 HELIX 17 AB8 GLY A 304 ARG A 307 5 4 HELIX 18 AB9 HIS A 308 TYR A 314 1 7 HELIX 19 AC1 TYR A 314 CYS A 323 1 10 HELIX 20 AC2 GLN A 331 ALA A 342 1 12 HELIX 21 AC3 GLY B 33 ILE B 42 1 10 HELIX 22 AC4 ILE B 42 THR B 60 1 19 HELIX 23 AC5 LYS B 61 GLU B 70 1 10 HELIX 24 AC6 SER B 73 GLY B 82 1 10 HELIX 25 AC7 GLU B 84 GLU B 98 1 15 HELIX 26 AC8 SER B 111 LEU B 117 1 7 HELIX 27 AC9 PHE B 120 VAL B 128 1 9 HELIX 28 AD1 TYR B 131 GLN B 137 1 7 HELIX 29 AD2 GLN B 137 LEU B 142 1 6 HELIX 30 AD3 ASP B 152 HIS B 165 1 14 HELIX 31 AD4 ASP B 167 GLN B 178 1 12 HELIX 32 AD5 GLY B 194 LEU B 204 1 11 HELIX 33 AD6 ASP B 215 GLU B 229 1 15 HELIX 34 AD7 GLY B 241 SER B 248 1 8 HELIX 35 AD8 VAL B 262 GLY B 271 1 10 HELIX 36 AD9 GLY B 271 PHE B 286 1 16 HELIX 37 AE1 GLY B 304 ARG B 307 5 4 HELIX 38 AE2 HIS B 308 TYR B 314 1 7 HELIX 39 AE3 TYR B 314 THR B 325 1 12 HELIX 40 AE4 GLN B 331 ALA B 342 1 12 SHEET 1 AA1 2 LEU A 101 THR A 104 0 SHEET 2 AA1 2 GLY A 107 LEU A 110 -1 O GLY A 107 N THR A 104 SHEET 1 AA2 7 VAL A 235 HIS A 239 0 SHEET 2 AA2 7 GLN A 208 GLU A 213 1 N GLY A 211 O SER A 238 SHEET 3 AA2 7 LYS A 185 LEU A 189 1 N LEU A 186 O GLN A 208 SHEET 4 AA2 7 PHE A 256 GLY A 260 1 O VAL A 258 N LEU A 187 SHEET 5 AA2 7 ASN A 290 VAL A 296 1 O ILE A 292 N ILE A 257 SHEET 6 AA2 7 GLU A 362 ARG A 369 -1 O LEU A 367 N LEU A 291 SHEET 7 AA2 7 LEU A 344 THR A 351 -1 N GLU A 350 O GLY A 364 SHEET 1 AA3 2 LEU B 101 THR B 104 0 SHEET 2 AA3 2 GLY B 107 LEU B 110 -1 O GLY B 107 N THR B 104 SHEET 1 AA4 7 VAL B 235 HIS B 239 0 SHEET 2 AA4 7 GLN B 208 GLU B 213 1 N GLY B 211 O SER B 238 SHEET 3 AA4 7 LYS B 185 LEU B 189 1 N LEU B 186 O GLN B 208 SHEET 4 AA4 7 PHE B 256 GLY B 260 1 O VAL B 258 N LEU B 187 SHEET 5 AA4 7 ASN B 290 VAL B 296 1 O ILE B 292 N LEU B 259 SHEET 6 AA4 7 GLU B 362 ARG B 369 -1 O LEU B 367 N LEU B 291 SHEET 7 AA4 7 LEU B 344 THR B 351 -1 N GLU B 350 O GLY B 364 LINK C GLY A 82 N MSE A 83 1555 1555 1.34 LINK C MSE A 83 N GLU A 84 1555 1555 1.36 LINK C VAL A 125 N MSE A 126 1555 1555 1.32 LINK C MSE A 126 N LEU A 127 1555 1555 1.33 LINK C GLN A 137 N MSE A 138 1555 1555 1.35 LINK C MSE A 138 N GLY A 139 1555 1555 1.33 LINK C LEU A 175 N MSE A 176 1555 1555 1.34 LINK C MSE A 176 N ALA A 177 1555 1555 1.34 LINK C ALA A 305 N MSE A 306 1555 1555 1.33 LINK C MSE A 306 N ARG A 307 1555 1555 1.34 LINK C GLY B 82 N MSE B 83 1555 1555 1.33 LINK C MSE B 83 N GLU B 84 1555 1555 1.33 LINK C VAL B 125 N MSE B 126 1555 1555 1.33 LINK C MSE B 126 N LEU B 127 1555 1555 1.33 LINK C GLN B 137 N MSE B 138 1555 1555 1.35 LINK C MSE B 138 N GLY B 139 1555 1555 1.33 LINK C LEU B 175 N MSE B 176 1555 1555 1.34 LINK C MSE B 176 N ALA B 177 1555 1555 1.33 LINK C ALA B 305 N MSE B 306 1555 1555 1.33 LINK C MSE B 306 N ARG B 307 1555 1555 1.33 LINK O HIS A 322 MG MG A1002 1555 1555 2.55 LINK O THR A 325 MG MG A1002 1555 1555 2.35 LINK OE1 GLN A 327 MG MG A1001 1555 1555 2.06 LINK O GLN A 327 MG MG A1002 1555 1555 2.32 LINK MG MG A1001 O HOH A1112 1555 1555 2.07 LINK MG MG A1001 O HOH A1122 1555 1555 2.28 LINK MG MG A1002 O HOH A1511 1555 1555 2.55 LINK O HIS B 322 NA NA B 402 1555 1555 2.51 LINK O THR B 325 NA NA B 402 1555 1555 2.30 LINK O GLN B 327 NA NA B 402 1555 1555 2.38 LINK MG MG B 401 O HOH B 546 1555 1555 2.02 LINK MG MG B 401 O HOH B 666 1555 1555 2.26 LINK NA NA B 402 O HOH B 733 1555 1555 3.08 LINK NA NA B 402 O HOH B 880 1555 1555 2.87 CRYST1 147.847 65.531 74.823 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006764 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015260 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013365 0.00000