HEADER LIGASE 05-FEB-24 8RWZ TITLE OPEN NON-CROSSLINKED STRUCTURE BRD4BD2-MZ1-(NEDD8)-CRL2VHL COMPND MOL_ID: 1; COMPND 2 MOLECULE: BROMODOMAIN-CONTAINING PROTEIN 4; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTEIN HUNK1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: PROTEIN G7,PVHL; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: ELONGIN-B; COMPND 13 CHAIN: C; COMPND 14 SYNONYM: ELOB,ELONGIN 18 KDA SUBUNIT,RNA POLYMERASE II TRANSCRIPTION COMPND 15 FACTOR SIII SUBUNIT B,SIII P18,TRANSCRIPTION ELONGATION FACTOR B COMPND 16 POLYPEPTIDE 2; COMPND 17 ENGINEERED: YES; COMPND 18 MOL_ID: 4; COMPND 19 MOLECULE: ELONGIN-C; COMPND 20 CHAIN: D; COMPND 21 ENGINEERED: YES; COMPND 22 MOL_ID: 5; COMPND 23 MOLECULE: CULLIN-2; COMPND 24 CHAIN: E; COMPND 25 SYNONYM: CUL-2; COMPND 26 ENGINEERED: YES; COMPND 27 MOL_ID: 6; COMPND 28 MOLECULE: RBX1; COMPND 29 CHAIN: R; COMPND 30 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BRD4, HUNK1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: VHL; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_COMMON: HUMAN; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 GENE: ELOB, TCEB2; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 22 MOL_ID: 4; SOURCE 23 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 24 ORGANISM_COMMON: HUMAN; SOURCE 25 ORGANISM_TAXID: 9606; SOURCE 26 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 27 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 28 MOL_ID: 5; SOURCE 29 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 30 ORGANISM_COMMON: HUMAN; SOURCE 31 ORGANISM_TAXID: 9606; SOURCE 32 GENE: CUL2; SOURCE 33 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 34 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 35 MOL_ID: 6; SOURCE 36 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 37 ORGANISM_TAXID: 9606; SOURCE 38 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 39 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BET BROMODOMAIN, E3 LIGASE, PROTAC, LIGASE EXPDTA ELECTRON MICROSCOPY AUTHOR A.CIULLI,C.CROWE,M.A.NAKACONE REVDAT 1 06-MAR-24 8RWZ 0 JRNL AUTH A.CIULLI,C.CROWE,M.A.NAKASONE JRNL TITL OPEN NON-CROSSLINKED STRUCTURE BRD4BD2-MZ1-(NEDD8)-CRL2VHL JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 4.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 4.000 REMARK 3 NUMBER OF PARTICLES : 132697 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8RWZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-FEB-24. REMARK 100 THE DEPOSITION ID IS D_1292136432. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : OPEN NON-CROSSLINKED STRUCTURE REMARK 245 BRD4BD2-MZ1-(NEDD8)-CRL2VHL REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.80 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS GLACIOS REMARK 245 DETECTOR TYPE : TFS FALCON 4I (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1700.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3200.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 2600.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, R REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 333 REMARK 465 ASP A 334 REMARK 465 VAL A 335 REMARK 465 PRO A 336 REMARK 465 ASP A 337 REMARK 465 SER A 338 REMARK 465 GLN A 339 REMARK 465 GLN A 340 REMARK 465 HIS A 341 REMARK 465 PRO A 342 REMARK 465 ALA A 343 REMARK 465 PRO A 344 REMARK 465 GLU A 345 REMARK 465 LYS A 346 REMARK 465 LYS E 659 REMARK 465 ASP E 660 REMARK 465 THR E 661 REMARK 465 PRO E 662 REMARK 465 GLN E 663 REMARK 465 GLU E 664 REMARK 465 MET E 665 REMARK 465 GLU E 666 REMARK 465 GLN E 667 REMARK 465 THR E 668 REMARK 465 ARG E 669 REMARK 465 SER E 670 REMARK 465 ALA E 671 REMARK 465 VAL E 672 REMARK 465 ASP E 673 REMARK 465 GLU E 674 REMARK 465 ASP E 675 REMARK 465 ARG E 676 REMARK 465 LYS E 677 REMARK 465 MET E 678 REMARK 465 TYR E 679 REMARK 465 LEU E 680 REMARK 465 GLN E 681 REMARK 465 ALA E 682 REMARK 465 ALA E 683 REMARK 465 ILE E 684 REMARK 465 VAL E 685 REMARK 465 ARG E 686 REMARK 465 ILE E 687 REMARK 465 MET E 688 REMARK 465 LYS E 689 REMARK 465 ALA E 690 REMARK 465 ARG E 691 REMARK 465 LYS E 692 REMARK 465 VAL E 693 REMARK 465 LEU E 694 REMARK 465 ARG E 695 REMARK 465 HIS E 696 REMARK 465 ASN E 697 REMARK 465 ALA E 698 REMARK 465 LEU E 699 REMARK 465 ILE E 700 REMARK 465 GLN E 701 REMARK 465 GLU E 702 REMARK 465 VAL E 703 REMARK 465 ILE E 704 REMARK 465 SER E 705 REMARK 465 GLN E 706 REMARK 465 SER E 707 REMARK 465 ARG E 708 REMARK 465 ALA E 709 REMARK 465 ARG E 710 REMARK 465 PHE E 711 REMARK 465 ASN E 712 REMARK 465 PRO E 713 REMARK 465 SER E 714 REMARK 465 ILE E 715 REMARK 465 SER E 716 REMARK 465 MET E 717 REMARK 465 ILE E 718 REMARK 465 LYS E 719 REMARK 465 LYS E 720 REMARK 465 CYS E 721 REMARK 465 ILE E 722 REMARK 465 GLU E 723 REMARK 465 VAL E 724 REMARK 465 LEU E 725 REMARK 465 ILE E 726 REMARK 465 ASP E 727 REMARK 465 LYS E 728 REMARK 465 GLN E 729 REMARK 465 TYR E 730 REMARK 465 ILE E 731 REMARK 465 GLU E 732 REMARK 465 ARG E 733 REMARK 465 SER E 734 REMARK 465 GLN E 735 REMARK 465 ALA E 736 REMARK 465 SER E 737 REMARK 465 ALA E 738 REMARK 465 ASP E 739 REMARK 465 GLU E 740 REMARK 465 TYR E 741 REMARK 465 SER E 742 REMARK 465 TYR E 743 REMARK 465 VAL E 744 REMARK 465 ALA E 745 REMARK 465 GLY R 3 REMARK 465 SER R 4 REMARK 465 MET R 5 REMARK 465 ASP R 6 REMARK 465 VAL R 7 REMARK 465 ASP R 8 REMARK 465 THR R 9 REMARK 465 PRO R 10 REMARK 465 SER R 11 REMARK 465 GLY R 12 REMARK 465 THR R 13 REMARK 465 ASN R 14 REMARK 465 SER R 15 REMARK 465 GLY R 16 REMARK 465 ALA R 17 REMARK 465 GLY R 18 REMARK 465 LYS R 19 REMARK 465 GLY R 109 REMARK 465 SER R 110 REMARK 465 MET R 111 REMARK 465 ASP R 112 REMARK 465 VAL R 113 REMARK 465 ASP R 114 REMARK 465 THR R 115 REMARK 465 PRO R 116 REMARK 465 SER R 117 REMARK 465 GLY R 118 REMARK 465 THR R 119 REMARK 465 ASN R 120 REMARK 465 SER R 121 REMARK 465 GLY R 122 REMARK 465 ALA R 123 REMARK 465 GLY R 124 REMARK 465 LYS R 125 REMARK 465 LYS R 126 REMARK 465 ARG R 127 REMARK 465 PHE R 128 REMARK 465 GLU R 129 REMARK 465 VAL R 130 REMARK 465 LYS R 131 REMARK 465 LYS R 132 REMARK 465 TRP R 133 REMARK 465 ASN R 134 REMARK 465 CYS R 135 REMARK 465 ALA R 136 REMARK 465 ILE R 137 REMARK 465 CYS R 138 REMARK 465 ARG R 139 REMARK 465 ASN R 140 REMARK 465 HIS R 141 REMARK 465 ILE R 142 REMARK 465 MET R 143 REMARK 465 ASP R 144 REMARK 465 LEU R 145 REMARK 465 CYS R 146 REMARK 465 ILE R 147 REMARK 465 GLU R 148 REMARK 465 CYS R 149 REMARK 465 GLN R 150 REMARK 465 ALA R 151 REMARK 465 ASN R 152 REMARK 465 GLN R 153 REMARK 465 ALA R 154 REMARK 465 SER R 155 REMARK 465 ALA R 156 REMARK 465 THR R 157 REMARK 465 SER R 158 REMARK 465 GLU R 159 REMARK 465 GLU R 160 REMARK 465 CYS R 161 REMARK 465 THR R 162 REMARK 465 VAL R 163 REMARK 465 ALA R 164 REMARK 465 TRP R 165 REMARK 465 GLY R 166 REMARK 465 VAL R 167 REMARK 465 CYS R 168 REMARK 465 ASN R 169 REMARK 465 HIS R 170 REMARK 465 ALA R 171 REMARK 465 PHE R 172 REMARK 465 HIS R 173 REMARK 465 PHE R 174 REMARK 465 HIS R 175 REMARK 465 CYS R 176 REMARK 465 ILE R 177 REMARK 465 SER R 178 REMARK 465 ARG R 179 REMARK 465 TRP R 180 REMARK 465 LEU R 181 REMARK 465 LYS R 182 REMARK 465 THR R 183 REMARK 465 ARG R 184 REMARK 465 GLN R 185 REMARK 465 VAL R 186 REMARK 465 CYS R 187 REMARK 465 PRO R 188 REMARK 465 LEU R 189 REMARK 465 ASP R 190 REMARK 465 ASN R 191 REMARK 465 ARG R 192 REMARK 465 GLU R 193 REMARK 465 TRP R 194 REMARK 465 GLU R 195 REMARK 465 PHE R 196 REMARK 465 GLN R 197 REMARK 465 LYS R 198 REMARK 465 TYR R 199 REMARK 465 GLY R 200 REMARK 465 HIS R 201 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR B 98 N 759 A 501 0.50 REMARK 500 CE2 TYR B 98 CB 759 A 501 0.72 REMARK 500 HE2 TYR B 98 CB 759 A 501 0.83 REMARK 500 CZ TYR B 98 CD2 759 A 501 1.02 REMARK 500 OH TYR B 98 CD2 759 A 501 1.08 REMARK 500 HE2 TYR B 98 CA 759 A 501 1.09 REMARK 500 HB2 PRO B 99 SBR 759 A 501 1.11 REMARK 500 HH TYR B 98 CD2 759 A 501 1.24 REMARK 500 HH TYR B 98 N 759 A 501 1.32 REMARK 500 HD22 ASN A 433 CAB 759 A 501 1.36 REMARK 500 HG2 PRO B 99 CCF 759 A 501 1.45 REMARK 500 HZ3 TRP B 88 CAF 759 A 501 1.46 REMARK 500 HG SER D 23 O MET E 1 1.51 REMARK 500 HG SER D 47 OD1 ASP E 102 1.55 REMARK 500 HG2 PRO B 99 CCH 759 A 501 1.56 REMARK 500 OE2 GLU E 208 HG SER E 258 1.56 REMARK 500 HG1 THR B 124 OD2 ASP B 126 1.57 REMARK 500 HG SER B 65 O LEU B 89 1.57 REMARK 500 OD1 ASP A 399 HG1 THR A 402 1.57 REMARK 500 OD2 ASP A 399 HG SER A 401 1.57 REMARK 500 O TRP E 91 HG SER E 95 1.58 REMARK 500 O ASN D 61 HG SER E 40 1.58 REMARK 500 OH TYR B 98 CBW 759 A 501 1.59 REMARK 500 NH1 ARG B 107 CAV 759 A 501 1.64 REMARK 500 OD2 ASP R 97 ZN ZN R 303 1.65 REMARK 500 CE2 TYR B 98 CG 759 A 501 1.75 REMARK 500 CZ TYR B 98 CB 759 A 501 1.75 REMARK 500 OD1 ASN A 433 CCB 759 A 501 1.80 REMARK 500 CD2 TYR B 98 CB 759 A 501 1.80 REMARK 500 OH TYR B 98 CA 759 A 501 1.84 REMARK 500 CZ TYR B 98 CA 759 A 501 1.92 REMARK 500 CG ASN A 433 NBJ 759 A 501 2.07 REMARK 500 CZ ARG B 107 SBR 759 A 501 2.11 REMARK 500 OH TYR B 98 CG 759 A 501 2.13 REMARK 500 OD1 ASN A 433 NBK 759 A 501 2.13 REMARK 500 CB PRO B 99 SBR 759 A 501 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLN D 51 N GLN D 51 CA 0.137 REMARK 500 GLN D 51 CA GLN D 51 CB 1.480 REMARK 500 TRP E 35 CE2 TRP E 35 CZ2 0.302 REMARK 500 TRP E 35 CE2 TRP E 35 CD2 0.315 REMARK 500 TRP E 35 CD2 TRP E 35 CE3 0.333 REMARK 500 TRP E 35 CE3 TRP E 35 CZ3 0.349 REMARK 500 TRP E 35 CZ3 TRP E 35 CH2 0.333 REMARK 500 TRP E 35 CH2 TRP E 35 CZ2 0.334 REMARK 500 GLY E 550 CA GLY E 550 C 0.125 REMARK 500 TRP E 555 CE2 TRP E 555 CZ2 0.322 REMARK 500 TRP E 555 CE2 TRP E 555 CD2 0.306 REMARK 500 TRP E 555 CD2 TRP E 555 CE3 0.333 REMARK 500 TRP E 555 CE3 TRP E 555 CZ3 0.341 REMARK 500 TRP E 555 CZ3 TRP E 555 CH2 0.342 REMARK 500 TRP E 555 CH2 TRP E 555 CZ2 0.349 REMARK 500 ALA R 31 CA ALA R 31 C 1.459 REMARK 500 TRP R 35 CE2 TRP R 35 CZ2 0.508 REMARK 500 TRP R 35 CE2 TRP R 35 CD2 0.520 REMARK 500 TRP R 35 CD2 TRP R 35 CE3 0.512 REMARK 500 TRP R 35 CE3 TRP R 35 CZ3 0.532 REMARK 500 TRP R 35 CZ3 TRP R 35 CH2 0.536 REMARK 500 TRP R 35 CH2 TRP R 35 CZ2 0.542 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 410 NE - CZ - NH2 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 444 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG B 64 NE - CZ - NH2 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG B 82 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG B 113 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG B 120 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG B 200 NE - CZ - NH2 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG C 8 NE - CZ - NH2 ANGL. DEV. = 4.8 DEGREES REMARK 500 SER D 24 N - CA - C ANGL. DEV. = 19.7 DEGREES REMARK 500 GLY D 26 N - CA - C ANGL. DEV. = 20.1 DEGREES REMARK 500 ILE D 42 CA - CB - CG1 ANGL. DEV. = -12.1 DEGREES REMARK 500 GLY D 50 N - CA - C ANGL. DEV. = 15.7 DEGREES REMARK 500 GLN D 51 CB - CA - C ANGL. DEV. = 15.8 DEGREES REMARK 500 GLN D 51 N - CA - CB ANGL. DEV. = 14.1 DEGREES REMARK 500 GLN D 51 CA - CB - CG ANGL. DEV. = 16.5 DEGREES REMARK 500 GLU D 64 N - CA - C ANGL. DEV. = 17.9 DEGREES REMARK 500 PRO D 66 C - N - CA ANGL. DEV. = 9.1 DEGREES REMARK 500 TYR D 76 CB - CG - CD1 ANGL. DEV. = -4.0 DEGREES REMARK 500 PHE D 77 CB - CG - CD2 ANGL. DEV. = -4.3 DEGREES REMARK 500 ARG D 82 NE - CZ - NH2 ANGL. DEV. = 3.9 DEGREES REMARK 500 CYS D 112 CA - CB - SG ANGL. DEV. = 9.2 DEGREES REMARK 500 SER E 2 C - N - CA ANGL. DEV. = 16.5 DEGREES REMARK 500 TRP E 35 CB - CG - CD2 ANGL. DEV. = 8.2 DEGREES REMARK 500 TRP E 35 CB - CG - CD1 ANGL. DEV. = -9.8 DEGREES REMARK 500 TRP E 35 CE2 - CD2 - CG ANGL. DEV. = -7.2 DEGREES REMARK 500 TYR E 43 CB - CG - CD2 ANGL. DEV. = -4.1 DEGREES REMARK 500 ARG E 75 NE - CZ - NH2 ANGL. DEV. = 3.5 DEGREES REMARK 500 TYR E 90 CB - CG - CD2 ANGL. DEV. = -4.5 DEGREES REMARK 500 MET E 101 N - CA - CB ANGL. DEV. = 11.4 DEGREES REMARK 500 CYS E 103 CA - C - N ANGL. DEV. = 15.6 DEGREES REMARK 500 CYS E 103 O - C - N ANGL. DEV. = -12.2 DEGREES REMARK 500 LEU E 104 N - CA - C ANGL. DEV. = 23.7 DEGREES REMARK 500 ARG E 106 CB - CA - C ANGL. DEV. = 13.4 DEGREES REMARK 500 ARG E 106 NE - CZ - NH2 ANGL. DEV. = 3.4 DEGREES REMARK 500 TYR E 107 CB - CG - CD1 ANGL. DEV. = -4.1 DEGREES REMARK 500 ARG E 171 NE - CZ - NH2 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG E 242 NE - CZ - NH2 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG E 249 NE - CZ - NH2 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG E 414 NE - CZ - NH2 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG E 442 NE - CZ - NH2 ANGL. DEV. = 3.5 DEGREES REMARK 500 GLY E 550 CA - C - O ANGL. DEV. = -30.0 DEGREES REMARK 500 TRP E 555 NE1 - CE2 - CZ2 ANGL. DEV. = 8.0 DEGREES REMARK 500 TRP E 555 NE1 - CE2 - CD2 ANGL. DEV. = -7.3 DEGREES REMARK 500 ARG R 21 NE - CZ - NH2 ANGL. DEV. = 3.1 DEGREES REMARK 500 ALA R 31 CB - CA - C ANGL. DEV. = 19.2 DEGREES REMARK 500 ALA R 31 N - CA - CB ANGL. DEV. = -16.3 DEGREES REMARK 500 ALA R 31 O - C - N ANGL. DEV. = -21.7 DEGREES REMARK 500 TRP R 35 CG - CD1 - NE1 ANGL. DEV. = 8.6 DEGREES REMARK 500 TRP R 35 NE1 - CE2 - CZ2 ANGL. DEV. = 11.0 DEGREES REMARK 500 TRP R 35 NE1 - CE2 - CD2 ANGL. DEV. = -8.9 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 52 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG B 69 15.16 55.93 REMARK 500 ASN B 90 -174.48 -67.89 REMARK 500 HIS C 10 -123.25 48.79 REMARK 500 THR C 16 -167.12 -172.27 REMARK 500 ASP C 47 -121.92 53.16 REMARK 500 ASP C 82 -118.14 58.80 REMARK 500 ASP C 101 21.54 -69.69 REMARK 500 ASP D 25 50.26 -103.29 REMARK 500 PRO D 49 152.85 -47.84 REMARK 500 PHE D 52 117.85 -173.82 REMARK 500 ASN D 58 84.69 55.11 REMARK 500 LEU E 3 77.58 -54.64 REMARK 500 GLU E 80 -68.23 8.76 REMARK 500 ASP E 102 34.33 -69.50 REMARK 500 CYS E 103 -78.33 -128.40 REMARK 500 MET E 132 71.98 -60.72 REMARK 500 ASN E 177 95.71 -68.10 REMARK 500 PHE E 198 77.62 -153.26 REMARK 500 ALA E 403 46.13 -73.57 REMARK 500 VAL E 500 99.15 -65.29 REMARK 500 PRO E 518 48.58 -81.49 REMARK 500 THR E 520 6.65 -66.82 REMARK 500 LYS E 552 75.44 -67.28 REMARK 500 LEU E 556 62.79 -102.34 REMARK 500 SER E 656 -9.75 -59.80 REMARK 500 PHE R 22 90.32 -170.05 REMARK 500 LYS R 25 -53.39 -141.13 REMARK 500 LYS R 26 56.17 -153.94 REMARK 500 TRP R 27 -176.74 -68.65 REMARK 500 ASN R 28 -87.63 -141.87 REMARK 500 ALA R 29 -175.10 55.08 REMARK 500 TRP R 33 -49.58 61.21 REMARK 500 ALA R 34 76.79 55.70 REMARK 500 CYS R 45 -8.69 -140.05 REMARK 500 CYS R 68 23.08 -79.51 REMARK 500 THR R 69 -160.17 -75.36 REMARK 500 PRO R 95 1.09 -67.86 REMARK 500 ASP R 97 -1.85 -150.74 REMARK 500 GLN R 104 -36.31 -134.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 69 0.08 SIDE CHAIN REMARK 500 TYR B 112 0.07 SIDE CHAIN REMARK 500 PHE D 29 0.07 SIDE CHAIN REMARK 500 PHE D 109 0.05 SIDE CHAIN REMARK 500 ARG E 32 0.14 SIDE CHAIN REMARK 500 PHE E 39 0.07 SIDE CHAIN REMARK 500 TYR E 43 0.11 SIDE CHAIN REMARK 500 TYR E 49 0.10 SIDE CHAIN REMARK 500 HIS E 88 0.07 SIDE CHAIN REMARK 500 TYR E 94 0.11 SIDE CHAIN REMARK 500 TYR E 100 0.16 SIDE CHAIN REMARK 500 TYR E 105 0.08 SIDE CHAIN REMARK 500 ARG E 106 0.10 SIDE CHAIN REMARK 500 TYR E 107 0.14 SIDE CHAIN REMARK 500 HIS E 190 0.09 SIDE CHAIN REMARK 500 TYR E 235 0.12 SIDE CHAIN REMARK 500 ARG E 249 0.08 SIDE CHAIN REMARK 500 HIS E 318 0.10 SIDE CHAIN REMARK 500 TYR E 510 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ASP E 102 12.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN R 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS R 45 SG REMARK 620 2 HIS R 80 ND1 115.7 REMARK 620 3 CYS R 83 SG 122.2 115.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN R 303 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS R 75 O REMARK 620 2 HIS R 77 ND1 115.1 REMARK 620 N 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-19569 RELATED DB: EMDB DBREF 8RWZ A 333 460 UNP O60885 BRD4_HUMAN 333 460 DBREF 8RWZ B 54 213 UNP P40337 VHL_HUMAN 1 160 DBREF 8RWZ C 1 104 UNP Q15370 ELOB_HUMAN 1 104 DBREF 8RWZ D 16 112 UNP L7N190 L7N190_MYOLU 16 112 DBREF 8RWZ E 1 745 UNP Q13617 CUL2_HUMAN 1 745 DBREF 8RWZ R 3 201 PDB 8RWZ 8RWZ 3 201 SEQRES 1 A 128 LYS ASP VAL PRO ASP SER GLN GLN HIS PRO ALA PRO GLU SEQRES 2 A 128 LYS SER SER LYS VAL SER GLU GLN LEU LYS CYS CYS SER SEQRES 3 A 128 GLY ILE LEU LYS GLU MET PHE ALA LYS LYS HIS ALA ALA SEQRES 4 A 128 TYR ALA TRP PRO PHE TYR LYS PRO VAL ASP VAL GLU ALA SEQRES 5 A 128 LEU GLY LEU HIS ASP TYR CYS ASP ILE ILE LYS HIS PRO SEQRES 6 A 128 MET ASP MET SER THR ILE LYS SER LYS LEU GLU ALA ARG SEQRES 7 A 128 GLU TYR ARG ASP ALA GLN GLU PHE GLY ALA ASP VAL ARG SEQRES 8 A 128 LEU MET PHE SER ASN CYS TYR LYS TYR ASN PRO PRO ASP SEQRES 9 A 128 HIS GLU VAL VAL ALA MET ALA ARG LYS LEU GLN ASP VAL SEQRES 10 A 128 PHE GLU MET ARG PHE ALA LYS MET PRO ASP GLU SEQRES 1 B 160 MET GLU ALA GLY ARG PRO ARG PRO VAL LEU ARG SER VAL SEQRES 2 B 160 ASN SER ARG GLU PRO SER GLN VAL ILE PHE CYS ASN ARG SEQRES 3 B 160 SER PRO ARG VAL VAL LEU PRO VAL TRP LEU ASN PHE ASP SEQRES 4 B 160 GLY GLU PRO GLN PRO TYR PRO THR LEU PRO PRO GLY THR SEQRES 5 B 160 GLY ARG ARG ILE HIS SER TYR ARG GLY HIS LEU TRP LEU SEQRES 6 B 160 PHE ARG ASP ALA GLY THR HIS ASP GLY LEU LEU VAL ASN SEQRES 7 B 160 GLN THR GLU LEU PHE VAL PRO SER LEU ASN VAL ASP GLY SEQRES 8 B 160 GLN PRO ILE PHE ALA ASN ILE THR LEU PRO VAL TYR THR SEQRES 9 B 160 LEU LYS GLU ARG CYS LEU GLN VAL VAL ARG SER LEU VAL SEQRES 10 B 160 LYS PRO GLU ASN TYR ARG ARG LEU ASP ILE VAL ARG SER SEQRES 11 B 160 LEU TYR GLU ASP LEU GLU ASP HIS PRO ASN VAL GLN LYS SEQRES 12 B 160 ASP LEU GLU ARG LEU THR GLN GLU ARG ILE ALA HIS GLN SEQRES 13 B 160 ARG MET GLY ASP SEQRES 1 C 104 MET ASP VAL PHE LEU MET ILE ARG ARG HIS LYS THR THR SEQRES 2 C 104 ILE PHE THR ASP ALA LYS GLU SER SER THR VAL PHE GLU SEQRES 3 C 104 LEU LYS ARG ILE VAL GLU GLY ILE LEU LYS ARG PRO PRO SEQRES 4 C 104 ASP GLU GLN ARG LEU TYR LYS ASP ASP GLN LEU LEU ASP SEQRES 5 C 104 ASP GLY LYS THR LEU GLY GLU CYS GLY PHE THR SER GLN SEQRES 6 C 104 THR ALA ARG PRO GLN ALA PRO ALA THR VAL GLY LEU ALA SEQRES 7 C 104 PHE ARG ALA ASP ASP THR PHE GLU ALA LEU CYS ILE GLU SEQRES 8 C 104 PRO PHE SER SER PRO PRO GLU LEU PRO ASP VAL MET LYS SEQRES 1 D 97 ALA MET TYR VAL LYS LEU ILE SER SER ASP GLY HIS GLU SEQRES 2 D 97 PHE ILE VAL LYS ARG GLU HIS ALA LEU THR SER GLY THR SEQRES 3 D 97 ILE LYS ALA MET LEU SER GLY PRO GLY GLN PHE ALA GLU SEQRES 4 D 97 ASN GLU THR ASN GLU VAL ASN PHE ARG GLU ILE PRO SER SEQRES 5 D 97 HIS VAL LEU SER LYS VAL CYS MET TYR PHE THR TYR LYS SEQRES 6 D 97 VAL ARG TYR THR ASN SER SER THR GLU ILE PRO GLU PHE SEQRES 7 D 97 PRO ILE ALA PRO GLU ILE ALA LEU GLU LEU LEU MET ALA SEQRES 8 D 97 ALA ASN PHE LEU ASP CYS SEQRES 1 E 745 MET SER LEU LYS PRO ARG VAL VAL ASP PHE ASP GLU THR SEQRES 2 E 745 TRP ASN LYS LEU LEU THR THR ILE LYS ALA VAL VAL MET SEQRES 3 E 745 LEU GLU TYR VAL GLU ARG ALA THR TRP ASN ASP ARG PHE SEQRES 4 E 745 SER ASP ILE TYR ALA LEU CYS VAL ALA TYR PRO GLU PRO SEQRES 5 E 745 LEU GLY GLU ARG LEU TYR THR GLU THR LYS ILE PHE LEU SEQRES 6 E 745 GLU ASN HIS VAL ARG HIS LEU HIS LYS ARG VAL LEU GLU SEQRES 7 E 745 SER GLU GLU GLN VAL LEU VAL MET TYR HIS ARG TYR TRP SEQRES 8 E 745 GLU GLU TYR SER LYS GLY ALA ASP TYR MET ASP CYS LEU SEQRES 9 E 745 TYR ARG TYR LEU ASN THR GLN PHE ILE LYS LYS ASN LYS SEQRES 10 E 745 LEU THR GLU ALA ASP LEU GLN TYR GLY TYR GLY GLY VAL SEQRES 11 E 745 ASP MET ASN GLU PRO LEU MET GLU ILE GLY GLU LEU ALA SEQRES 12 E 745 LEU ASP MET TRP ARG LYS LEU MET VAL GLU PRO LEU GLN SEQRES 13 E 745 ALA ILE LEU ILE ARG MET LEU LEU ARG GLU ILE LYS ASN SEQRES 14 E 745 ASP ARG GLY GLY GLU ASP PRO ASN GLN LYS VAL ILE HIS SEQRES 15 E 745 GLY VAL ILE ASN SER PHE VAL HIS VAL GLU GLN TYR LYS SEQRES 16 E 745 LYS LYS PHE PRO LEU LYS PHE TYR GLN GLU ILE PHE GLU SEQRES 17 E 745 SER PRO PHE LEU THR GLU THR GLY GLU TYR TYR LYS GLN SEQRES 18 E 745 GLU ALA SER ASN LEU LEU GLN GLU SER ASN CYS SER GLN SEQRES 19 E 745 TYR MET GLU LYS VAL LEU GLY ARG LEU LYS ASP GLU GLU SEQRES 20 E 745 ILE ARG CYS ARG LYS TYR LEU HIS PRO SER SER TYR THR SEQRES 21 E 745 LYS VAL ILE HIS GLU CYS GLN GLN ARG MET VAL ALA ASP SEQRES 22 E 745 HIS LEU GLN PHE LEU HIS ALA GLU CYS HIS ASN ILE ILE SEQRES 23 E 745 ARG GLN GLU LYS LYS ASN ASP MET ALA ASN MET TYR VAL SEQRES 24 E 745 LEU LEU ARG ALA VAL SER THR GLY LEU PRO HIS MET ILE SEQRES 25 E 745 GLN GLU LEU GLN ASN HIS ILE HIS ASP GLU GLY LEU ARG SEQRES 26 E 745 ALA THR SER ASN LEU THR GLN GLU ASN MET PRO THR LEU SEQRES 27 E 745 PHE VAL GLU SER VAL LEU GLU VAL HIS GLY LYS PHE VAL SEQRES 28 E 745 GLN LEU ILE ASN THR VAL LEU ASN GLY ASP GLN HIS PHE SEQRES 29 E 745 MET SER ALA LEU ASP LYS ALA LEU THR SER VAL VAL ASN SEQRES 30 E 745 TYR ARG GLU PRO LYS SER VAL CYS LYS ALA PRO GLU LEU SEQRES 31 E 745 LEU ALA LYS TYR CYS ASP ASN LEU LEU LYS LYS SER ALA SEQRES 32 E 745 LYS GLY MET THR GLU ASN GLU VAL GLU ASP ARG LEU THR SEQRES 33 E 745 SER PHE ILE THR VAL PHE LYS TYR ILE ASP ASP LYS ASP SEQRES 34 E 745 VAL PHE GLN LYS PHE TYR ALA ARG MET LEU ALA LYS ARG SEQRES 35 E 745 LEU ILE HIS GLY LEU SER MET SER MET ASP SER GLU GLU SEQRES 36 E 745 ALA MET ILE ASN LYS LEU LYS GLN ALA CYS GLY TYR GLU SEQRES 37 E 745 PHE THR SER LYS LEU HIS ARG MET TYR THR ASP MET SER SEQRES 38 E 745 VAL SER ALA ASP LEU ASN ASN LYS PHE ASN ASN PHE ILE SEQRES 39 E 745 LYS ASN GLN ASP THR VAL ILE ASP LEU GLY ILE SER PHE SEQRES 40 E 745 GLN ILE TYR VAL LEU GLN ALA GLY ALA TRP PRO LEU THR SEQRES 41 E 745 GLN ALA PRO SER SER THR PHE ALA ILE PRO GLN GLU LEU SEQRES 42 E 745 GLU LYS SER VAL GLN MET PHE GLU LEU PHE TYR SER GLN SEQRES 43 E 745 HIS PHE SER GLY ARG LYS LEU THR TRP LEU HIS TYR LEU SEQRES 44 E 745 CYS THR GLY GLU VAL LYS MET ASN TYR LEU GLY LYS PRO SEQRES 45 E 745 TYR VAL ALA MET VAL THR THR TYR GLN MET ALA VAL LEU SEQRES 46 E 745 LEU ALA PHE ASN ASN SER GLU THR VAL SER TYR LYS GLU SEQRES 47 E 745 LEU GLN ASP SER THR GLN MET ASN GLU LYS GLU LEU THR SEQRES 48 E 745 LYS THR ILE LYS SER LEU LEU ASP VAL LYS MET ILE ASN SEQRES 49 E 745 HIS ASP SER GLU LYS GLU ASP ILE ASP ALA GLU SER SER SEQRES 50 E 745 PHE SER LEU ASN MET ASN PHE SER SER LYS ARG THR LYS SEQRES 51 E 745 PHE LYS ILE THR THR SER MET GLN LYS ASP THR PRO GLN SEQRES 52 E 745 GLU MET GLU GLN THR ARG SER ALA VAL ASP GLU ASP ARG SEQRES 53 E 745 LYS MET TYR LEU GLN ALA ALA ILE VAL ARG ILE MET LYS SEQRES 54 E 745 ALA ARG LYS VAL LEU ARG HIS ASN ALA LEU ILE GLN GLU SEQRES 55 E 745 VAL ILE SER GLN SER ARG ALA ARG PHE ASN PRO SER ILE SEQRES 56 E 745 SER MET ILE LYS LYS CYS ILE GLU VAL LEU ILE ASP LYS SEQRES 57 E 745 GLN TYR ILE GLU ARG SER GLN ALA SER ALA ASP GLU TYR SEQRES 58 E 745 SER TYR VAL ALA SEQRES 1 R 199 GLY SER MET ASP VAL ASP THR PRO SER GLY THR ASN SER SEQRES 2 R 199 GLY ALA GLY LYS LYS ARG PHE GLU VAL LYS LYS TRP ASN SEQRES 3 R 199 ALA VAL ALA LEU TRP ALA TRP ASP ILE VAL VAL ASP ASN SEQRES 4 R 199 CYS ALA ILE CYS ARG ASN HIS ILE MET ASP LEU CYS ILE SEQRES 5 R 199 GLU CYS GLN ALA ASN GLN ALA SER ALA THR SER GLU GLU SEQRES 6 R 199 CYS THR VAL ALA TRP GLY VAL CYS ASN HIS ALA PHE HIS SEQRES 7 R 199 PHE HIS CYS ILE SER ARG TRP LEU LYS THR ARG GLN VAL SEQRES 8 R 199 CYS PRO LEU ASP ASN ARG GLU TRP GLU PHE GLN LYS TYR SEQRES 9 R 199 GLY HIS GLY SER MET ASP VAL ASP THR PRO SER GLY THR SEQRES 10 R 199 ASN SER GLY ALA GLY LYS LYS ARG PHE GLU VAL LYS LYS SEQRES 11 R 199 TRP ASN CYS ALA ILE CYS ARG ASN HIS ILE MET ASP LEU SEQRES 12 R 199 CYS ILE GLU CYS GLN ALA ASN GLN ALA SER ALA THR SER SEQRES 13 R 199 GLU GLU CYS THR VAL ALA TRP GLY VAL CYS ASN HIS ALA SEQRES 14 R 199 PHE HIS PHE HIS CYS ILE SER ARG TRP LEU LYS THR ARG SEQRES 15 R 199 GLN VAL CYS PRO LEU ASP ASN ARG GLU TRP GLU PHE GLN SEQRES 16 R 199 LYS TYR GLY HIS HET 759 A 501 69 HET ZN R 301 1 HET ZN R 302 1 HET ZN R 303 1 HETNAM 759 (2~{S},4~{R})-1-[(2~{S})-2-[2-[2-[2-[2-[2-[(9~{S})-7- HETNAM 2 759 (4-CHLOROPHENYL)-4,5,13-TRIMETHYL-3-THIA-1,8,11,12- HETNAM 3 759 TETRAZATRICYCLO[8.3.0.0^{2,6}]TRIDECA-2(6),4,7,10,12- HETNAM 4 759 PENTAEN-9-YL]ETHANOYLAMINO]ETHOXY]ETHOXY]ETHOXY]ETHANO HETNAM 5 759 YLAMINO]-3,3-DIMETHYL-BUTANOYL]-~{N}-[[4-(4-METHYL-2, HETNAM 6 759 3-DIHYDRO-1,3-THIAZOL-5-YL)PHENYL]METHYL]-4-OXIDANYL- HETNAM 7 759 PYRROLIDINE-2-CARBOXAMIDE HETNAM ZN ZINC ION FORMUL 7 759 C49 H62 CL N9 O8 S2 FORMUL 8 ZN 3(ZN 2+) HELIX 1 AA1 SER A 351 PHE A 365 1 15 HELIX 2 AA2 HIS A 369 TRP A 374 1 6 HELIX 3 AA3 PRO A 375 TYR A 377 5 3 HELIX 4 AA4 ASP A 389 ILE A 394 1 6 HELIX 5 AA5 ASP A 399 ALA A 409 1 11 HELIX 6 AA6 ASP A 414 ASN A 433 1 20 HELIX 7 AA7 HIS A 437 ALA A 455 1 19 HELIX 8 AA8 THR B 157 VAL B 170 1 14 HELIX 9 AA9 LYS B 171 LEU B 178 5 8 HELIX 10 AB1 VAL B 181 ASP B 190 1 10 HELIX 11 AB2 ASN B 193 GLY B 212 1 20 HELIX 12 AB3 THR C 23 LYS C 36 1 14 HELIX 13 AB4 PRO C 38 ASP C 40 5 3 HELIX 14 AB5 ARG D 33 LEU D 37 1 5 HELIX 15 AB6 SER D 39 LEU D 46 1 8 HELIX 16 AB7 PRO D 66 THR D 84 1 19 HELIX 17 AB8 ILE D 99 ASP D 111 1 13 HELIX 18 AB9 ASP E 9 MET E 26 1 18 HELIX 19 AC1 GLU E 31 VAL E 47 1 17 HELIX 20 AC2 LEU E 53 GLU E 78 1 26 HELIX 21 AC3 SER E 79 GLU E 81 5 3 HELIX 22 AC4 GLN E 82 TYR E 100 1 19 HELIX 23 AC5 TYR E 105 PHE E 112 1 8 HELIX 24 AC6 PHE E 112 LYS E 117 1 6 HELIX 25 AC7 THR E 119 TYR E 125 1 7 HELIX 26 AC8 GLU E 138 MET E 151 1 14 HELIX 27 AC9 MET E 151 GLY E 172 1 22 HELIX 28 AD1 ASN E 177 VAL E 191 1 15 HELIX 29 AD2 LEU E 200 PHE E 207 1 8 HELIX 30 AD3 PHE E 207 SER E 230 1 24 HELIX 31 AD4 ASN E 231 LEU E 254 1 24 HELIX 32 AD5 HIS E 255 SER E 257 5 3 HELIX 33 AD6 SER E 258 VAL E 271 1 14 HELIX 34 AD7 HIS E 274 GLN E 288 1 15 HELIX 35 AD8 LYS E 290 ALA E 303 1 14 HELIX 36 AD9 GLY E 307 ASN E 329 1 23 HELIX 37 AE1 ASN E 334 LEU E 358 1 25 HELIX 38 AE2 ASP E 361 ASN E 377 1 17 HELIX 39 AE3 LYS E 386 LYS E 400 1 15 HELIX 40 AE4 THR E 407 LYS E 423 1 17 HELIX 41 AE5 ASP E 427 HIS E 445 1 19 HELIX 42 AE6 SER E 450 GLY E 466 1 17 HELIX 43 AE7 GLY E 466 ASN E 496 1 31 HELIX 44 AE8 PRO E 530 GLN E 546 1 17 HELIX 45 AE9 LEU E 556 LEU E 559 5 4 HELIX 46 AF1 THR E 579 PHE E 588 1 10 HELIX 47 AF2 TYR E 596 GLN E 604 1 9 HELIX 48 AF3 ASN E 606 VAL E 620 1 15 HELIX 49 AF4 CYS R 53 ALA R 58 1 6 HELIX 50 AF5 THR R 64 CYS R 68 5 5 HELIX 51 AF6 PHE R 81 LEU R 88 1 8 SHEET 1 AA1 4 GLY B 106 TYR B 112 0 SHEET 2 AA1 4 PRO B 71 ASN B 78 -1 N SER B 72 O SER B 111 SHEET 3 AA1 4 ILE B 147 THR B 152 1 O ALA B 149 N ILE B 75 SHEET 4 AA1 4 LEU B 129 VAL B 130 -1 N LEU B 129 O THR B 152 SHEET 1 AA2 3 PRO B 95 PRO B 97 0 SHEET 2 AA2 3 VAL B 84 LEU B 89 -1 N TRP B 88 O GLN B 96 SHEET 3 AA2 3 LEU B 116 ASP B 121 -1 O ARG B 120 N LEU B 85 SHEET 1 AA3 4 GLN C 49 LEU C 50 0 SHEET 2 AA3 4 GLN C 42 LYS C 46 -1 N LYS C 46 O GLN C 49 SHEET 3 AA3 4 ALA C 73 ALA C 81 -1 O ALA C 78 N ARG C 43 SHEET 4 AA3 4 THR C 84 PHE C 85 -1 O THR C 84 N ALA C 81 SHEET 1 AA4 8 GLN C 49 LEU C 50 0 SHEET 2 AA4 8 GLN C 42 LYS C 46 -1 N LYS C 46 O GLN C 49 SHEET 3 AA4 8 ALA C 73 ALA C 81 -1 O ALA C 78 N ARG C 43 SHEET 4 AA4 8 ASP C 2 ARG C 9 1 N ARG C 8 O VAL C 75 SHEET 5 AA4 8 THR C 12 LYS C 19 -1 O ALA C 18 N VAL C 3 SHEET 6 AA4 8 GLU D 28 LYS D 32 1 O GLU D 28 N THR C 13 SHEET 7 AA4 8 TYR D 18 ILE D 22 -1 N LEU D 21 O PHE D 29 SHEET 8 AA4 8 GLU D 59 ASN D 61 1 O VAL D 60 N ILE D 22 SHEET 1 AA5 3 THR E 561 MET E 566 0 SHEET 2 AA5 3 TYR E 573 THR E 578 -1 O VAL E 577 N GLY E 562 SHEET 3 AA5 3 LYS E 650 LYS E 652 1 O PHE E 651 N MET E 576 SHEET 1 AA6 3 THR E 593 SER E 595 0 SHEET 2 AA6 3 SER E 637 LEU E 640 -1 O PHE E 638 N VAL E 594 SHEET 3 AA6 3 ILE E 623 HIS E 625 -1 N ASN E 624 O SER E 639 SHEET 1 AA7 3 ALA R 78 HIS R 80 0 SHEET 2 AA7 3 VAL R 70 GLY R 73 -1 N ALA R 71 O PHE R 79 SHEET 3 AA7 3 PHE R 103 GLY R 107 -1 O GLN R 104 N TRP R 72 SSBOND 1 CYS R 53 CYS R 68 1555 1555 2.04 LINK OD1 ASN A 433 NBJ 759 A 501 1555 1555 1.28 LINK CD2 759 A 501 CE1 TYR B 98 1555 1555 1.60 LINK CA 759 A 501 CE2 TYR B 98 1555 1555 1.60 LINK CG 759 A 501 CZ TYR B 98 1555 1555 1.50 LINK N 759 A 501 CZ TYR B 98 1555 1555 1.47 LINK SBR 759 A 501 NH2 ARG B 107 1555 1555 1.77 LINK SG CYS R 45 ZN ZN R 302 1555 1555 2.15 LINK O CYS R 75 ZN ZN R 303 1555 1555 1.76 LINK ND1 HIS R 77 ZN ZN R 303 1555 1555 1.85 LINK ND1 HIS R 80 ZN ZN R 302 1555 1555 1.84 LINK ND1 HIS R 82 ZN ZN R 301 1555 1555 1.82 LINK SG CYS R 83 ZN ZN R 302 1555 1555 2.33 CISPEP 1 TYR E 49 PRO E 50 0 3.96 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000