HEADER VIRUS LIKE PARTICLE 20-FEB-24 8S41 TITLE THE STRUCTURE OF THE COPIA RETROTRANSPOSON ICOSAHEDRAL CAPSID (T=9) COMPND MOL_ID: 1; COMPND 2 MOLECULE: COPIA VLP PROTEIN; COMPND 3 CHAIN: A, F, G, L, Q, V, X, a, d SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227 KEYWDS TOMOGRAPHY, DROSOPHILA, MELANOGASTER, FOLLICLE CELL, COPIA, TY1, KEYWDS 2 RETROTRANSPOSON, LTR, VIRUS LIKE PARTICLE EXPDTA ELECTRON MICROSCOPY AUTHOR S.KLUMPE,F.BECK,J.A.G.BRIGGS,M.BECK,J.M.PLITZKO REVDAT 3 30-APR-25 8S41 1 JRNL REVDAT 2 19-MAR-25 8S41 1 JRNL REVDAT 1 05-MAR-25 8S41 0 JRNL AUTH S.KLUMPE,K.A.SENTI,F.BECK,J.SACHWEH,B.HAMPOELZ,P.RONCHI, JRNL AUTH 2 V.OORSCHOT,M.BRANDSTETTER,A.YEROSLAVIZ,J.A.G.BRIGGS, JRNL AUTH 3 J.BRENNECKE,M.BECK,J.M.PLITZKO JRNL TITL IN-CELL STRUCTURE AND SNAPSHOTS OF COPIA RETROTRANSPOSONS IN JRNL TITL 2 INTACT TISSUE BY CRYO-ET. JRNL REF CELL V. 188 2094 2025 JRNL REFN ISSN 1097-4172 JRNL PMID 40049165 JRNL DOI 10.1016/J.CELL.2025.02.003 REMARK 2 REMARK 2 RESOLUTION. 7.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : STOPGAP, FEI TOMOGRAPHY, WARP, ISOLDE, REMARK 3 RELION, RELION, RELION, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 7.700 REMARK 3 NUMBER OF PARTICLES : 735 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8S41 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-FEB-24. REMARK 100 THE DEPOSITION ID IS D_1292136662. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SUBTOMOGRAM AVERAGING REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : CELL REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : COPIA RETROTRANSPOSON CAPSID REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON IV (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 3500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 5000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 300.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: 540-MERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: 540-MERIC REMARK 350 SOFTWARE USED: UCSF CHIMERA 1.14_B42094. REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, F, G, L, Q, V, X, a, d REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.809017 -0.500000 0.309017 651.01673 REMARK 350 BIOMT2 2 -0.500000 0.309017 -0.809017 648.18391 REMARK 350 BIOMT3 2 0.309017 -0.809017 -0.500000 646.43312 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 647.70000 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 647.70000 REMARK 350 BIOMT1 4 0.809017 -0.500000 -0.309017 324.33390 REMARK 350 BIOMT2 4 -0.500000 -0.309017 -0.809017 849.11719 REMARK 350 BIOMT3 4 0.309017 0.809017 -0.500000 120.38296 REMARK 350 BIOMT1 5 0.500000 0.309017 -0.809017 323.06703 REMARK 350 BIOMT2 5 -0.309017 -0.809017 -0.500000 849.90016 REMARK 350 BIOMT3 5 -0.809017 0.500000 -0.309017 522.73343 REMARK 350 BIOMT1 6 -0.309017 -0.809017 -0.500000 849.90016 REMARK 350 BIOMT2 6 -0.809017 0.500000 -0.309017 525.26719 REMARK 350 BIOMT3 6 0.500000 0.309017 -0.809017 320.53327 REMARK 350 BIOMT1 7 -0.809017 0.500000 -0.309017 525.26719 REMARK 350 BIOMT2 7 0.500000 0.309017 -0.809017 323.06703 REMARK 350 BIOMT3 7 -0.309017 -0.809017 -0.500000 847.36640 REMARK 350 BIOMT1 8 -0.809017 -0.500000 -0.309017 850.38406 REMARK 350 BIOMT2 8 0.500000 -0.309017 -0.809017 524.00031 REMARK 350 BIOMT3 8 0.309017 -0.809017 0.500000 323.85000 REMARK 350 BIOMT1 9 -0.309017 0.809017 -0.500000 323.85000 REMARK 350 BIOMT2 9 -0.809017 -0.500000 -0.309017 850.38406 REMARK 350 BIOMT3 9 -0.500000 0.309017 0.809017 123.69969 REMARK 350 BIOMT1 10 0.500000 -0.309017 -0.809017 524.00031 REMARK 350 BIOMT2 10 -0.309017 0.809017 -0.500000 323.85000 REMARK 350 BIOMT3 10 0.809017 0.500000 0.309017 -202.68406 REMARK 350 BIOMT1 11 0.000000 0.000000 -1.000000 647.70000 REMARK 350 BIOMT2 11 -1.000000 0.000000 0.000000 650.23376 REMARK 350 BIOMT3 11 0.000000 1.000000 0.000000 -2.53376 REMARK 350 BIOMT1 12 -0.500000 -0.309017 -0.809017 849.11719 REMARK 350 BIOMT2 12 0.309017 0.809017 -0.500000 122.91672 REMARK 350 BIOMT3 12 0.809017 -0.500000 -0.309017 321.80015 REMARK 350 BIOMT1 13 -0.500000 0.309017 -0.809017 648.18391 REMARK 350 BIOMT2 13 0.309017 -0.809017 -0.500000 648.96688 REMARK 350 BIOMT3 13 -0.809017 -0.500000 0.309017 648.48297 REMARK 350 BIOMT1 14 -0.309017 -0.809017 -0.500000 849.90016 REMARK 350 BIOMT2 14 0.809017 -0.500000 0.309017 124.96657 REMARK 350 BIOMT3 14 -0.500000 -0.309017 0.809017 324.63297 REMARK 350 BIOMT1 15 -0.809017 0.500000 -0.309017 525.26719 REMARK 350 BIOMT2 15 -0.500000 -0.309017 0.809017 327.16673 REMARK 350 BIOMT3 15 0.309017 0.809017 0.500000 -202.20016 REMARK 350 BIOMT1 16 0.500000 0.309017 -0.809017 323.06703 REMARK 350 BIOMT2 16 0.309017 0.809017 0.500000 -199.66640 REMARK 350 BIOMT3 16 0.809017 -0.500000 0.309017 122.43281 REMARK 350 BIOMT1 17 -0.500000 0.309017 -0.809017 648.18391 REMARK 350 BIOMT2 17 -0.309017 0.809017 0.500000 1.26688 REMARK 350 BIOMT3 17 0.809017 0.500000 -0.309017 -3.31673 REMARK 350 BIOMT1 18 0.000000 0.000000 -1.000000 647.70000 REMARK 350 BIOMT2 18 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 18 0.000000 -1.000000 0.000000 647.70000 REMARK 350 BIOMT1 19 -0.500000 -0.309017 -0.809017 849.11719 REMARK 350 BIOMT2 19 -0.309017 -0.809017 0.500000 527.31704 REMARK 350 BIOMT3 19 -0.809017 0.500000 0.309017 323.36610 REMARK 350 BIOMT1 20 0.000000 -1.000000 0.000000 650.23376 REMARK 350 BIOMT2 20 0.000000 0.000000 1.000000 2.53376 REMARK 350 BIOMT3 20 -1.000000 0.000000 0.000000 647.70000 REMARK 350 BIOMT1 21 -0.809017 0.500000 0.309017 325.89985 REMARK 350 BIOMT2 21 0.500000 0.309017 0.809017 -198.88343 REMARK 350 BIOMT3 21 0.309017 0.809017 -0.500000 120.38296 REMARK 350 BIOMT1 22 0.809017 0.500000 -0.309017 -0.78297 REMARK 350 BIOMT2 22 0.500000 -0.309017 0.809017 2.04985 REMARK 350 BIOMT3 22 0.309017 -0.809017 -0.500000 646.43312 REMARK 350 BIOMT1 23 -0.309017 0.809017 -0.500000 323.85000 REMARK 350 BIOMT2 23 0.809017 0.500000 0.309017 -200.15031 REMARK 350 BIOMT3 23 0.500000 -0.309017 -0.809017 521.46655 REMARK 350 BIOMT1 24 0.500000 -0.309017 -0.809017 524.00031 REMARK 350 BIOMT2 24 0.309017 -0.809017 0.500000 326.38376 REMARK 350 BIOMT3 24 -0.809017 -0.500000 -0.309017 847.85031 REMARK 350 BIOMT1 25 -0.809017 -0.500000 -0.309017 850.38406 REMARK 350 BIOMT2 25 -0.500000 0.309017 0.809017 126.23345 REMARK 350 BIOMT3 25 -0.309017 0.809017 -0.500000 321.31624 REMARK 350 BIOMT1 26 -0.309017 -0.809017 0.500000 527.31704 REMARK 350 BIOMT2 26 -0.809017 0.500000 0.309017 325.89985 REMARK 350 BIOMT3 26 -0.500000 -0.309017 -0.809017 846.58343 REMARK 350 BIOMT1 27 -0.309017 0.809017 0.500000 1.26688 REMARK 350 BIOMT2 27 0.809017 0.500000 -0.309017 -0.78297 REMARK 350 BIOMT3 27 -0.500000 0.309017 -0.809017 645.65015 REMARK 350 BIOMT1 28 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 28 0.000000 -1.000000 0.000000 650.23376 REMARK 350 BIOMT3 28 0.000000 0.000000 -1.000000 645.16624 REMARK 350 BIOMT1 29 0.309017 0.809017 -0.500000 122.91672 REMARK 350 BIOMT2 29 0.809017 -0.500000 -0.309017 324.33390 REMARK 350 BIOMT3 29 -0.500000 -0.309017 -0.809017 846.58343 REMARK 350 BIOMT1 30 0.309017 -0.809017 -0.500000 648.96688 REMARK 350 BIOMT2 30 -0.809017 -0.500000 0.309017 651.01673 REMARK 350 BIOMT3 30 -0.500000 0.309017 -0.809017 645.65015 REMARK 350 BIOMT1 31 -1.000000 0.000000 0.000000 650.23376 REMARK 350 BIOMT2 31 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 31 0.000000 0.000000 -1.000000 645.16624 REMARK 350 BIOMT1 32 0.809017 0.500000 -0.309017 -0.78297 REMARK 350 BIOMT2 32 -0.500000 0.309017 -0.809017 648.18391 REMARK 350 BIOMT3 32 -0.309017 0.809017 0.500000 -1.26688 REMARK 350 BIOMT1 33 0.000000 -1.000000 0.000000 650.23376 REMARK 350 BIOMT2 33 0.000000 0.000000 -1.000000 647.70000 REMARK 350 BIOMT3 33 1.000000 0.000000 0.000000 -2.53376 REMARK 350 BIOMT1 34 -0.809017 0.500000 0.309017 325.89985 REMARK 350 BIOMT2 34 -0.500000 -0.309017 -0.809017 849.11719 REMARK 350 BIOMT3 34 -0.309017 -0.809017 0.500000 524.78328 REMARK 350 BIOMT1 35 -0.500000 -0.309017 0.809017 327.16673 REMARK 350 BIOMT2 35 -0.309017 -0.809017 -0.500000 849.90016 REMARK 350 BIOMT3 35 0.809017 -0.500000 0.309017 122.43281 REMARK 350 BIOMT1 36 0.309017 0.809017 0.500000 -199.66640 REMARK 350 BIOMT2 36 -0.809017 0.500000 -0.309017 525.26719 REMARK 350 BIOMT3 36 -0.500000 -0.309017 0.809017 324.63297 REMARK 350 BIOMT1 37 0.809017 -0.500000 0.309017 124.96657 REMARK 350 BIOMT2 37 0.500000 0.309017 -0.809017 323.06703 REMARK 350 BIOMT3 37 0.309017 0.809017 0.500000 -202.20016 REMARK 350 BIOMT1 38 0.809017 0.500000 0.309017 -200.15031 REMARK 350 BIOMT2 38 0.500000 -0.309017 -0.809017 524.00031 REMARK 350 BIOMT3 38 -0.309017 0.809017 -0.500000 321.31624 REMARK 350 BIOMT1 39 0.309017 -0.809017 0.500000 326.38376 REMARK 350 BIOMT2 39 -0.809017 -0.500000 -0.309017 850.38406 REMARK 350 BIOMT3 39 0.500000 -0.309017 -0.809017 521.46655 REMARK 350 BIOMT1 40 -0.500000 0.309017 0.809017 126.23345 REMARK 350 BIOMT2 40 -0.309017 0.809017 -0.500000 323.85000 REMARK 350 BIOMT3 40 -0.809017 -0.500000 -0.309017 847.85031 REMARK 350 BIOMT1 41 0.000000 0.000000 1.000000 2.53376 REMARK 350 BIOMT2 41 -1.000000 0.000000 0.000000 650.23376 REMARK 350 BIOMT3 41 0.000000 -1.000000 0.000000 647.70000 REMARK 350 BIOMT1 42 0.500000 0.309017 0.809017 -198.88343 REMARK 350 BIOMT2 42 0.309017 0.809017 -0.500000 122.91672 REMARK 350 BIOMT3 42 -0.809017 0.500000 0.309017 323.36610 REMARK 350 BIOMT1 43 0.500000 -0.309017 0.809017 2.04985 REMARK 350 BIOMT2 43 0.309017 -0.809017 -0.500000 648.96688 REMARK 350 BIOMT3 43 0.809017 0.500000 -0.309017 -3.31673 REMARK 350 BIOMT1 44 0.309017 0.809017 0.500000 -199.66640 REMARK 350 BIOMT2 44 0.809017 -0.500000 0.309017 124.96657 REMARK 350 BIOMT3 44 0.500000 0.309017 -0.809017 320.53327 REMARK 350 BIOMT1 45 0.809017 -0.500000 0.309017 124.96657 REMARK 350 BIOMT2 45 -0.500000 -0.309017 0.809017 327.16673 REMARK 350 BIOMT3 45 -0.309017 -0.809017 -0.500000 847.36640 REMARK 350 BIOMT1 46 -0.500000 -0.309017 0.809017 327.16673 REMARK 350 BIOMT2 46 0.309017 0.809017 0.500000 -199.66640 REMARK 350 BIOMT3 46 -0.809017 0.500000 -0.309017 522.73343 REMARK 350 BIOMT1 47 0.500000 -0.309017 0.809017 2.04985 REMARK 350 BIOMT2 47 -0.309017 0.809017 0.500000 1.26688 REMARK 350 BIOMT3 47 -0.809017 -0.500000 0.309017 648.48297 REMARK 350 BIOMT1 48 0.000000 0.000000 1.000000 2.53376 REMARK 350 BIOMT2 48 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 48 0.000000 1.000000 0.000000 -2.53376 REMARK 350 BIOMT1 49 0.500000 0.309017 0.809017 -198.88343 REMARK 350 BIOMT2 49 -0.309017 -0.809017 0.500000 527.31704 REMARK 350 BIOMT3 49 0.809017 -0.500000 -0.309017 321.80015 REMARK 350 BIOMT1 50 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 50 0.000000 0.000000 1.000000 2.53376 REMARK 350 BIOMT3 50 1.000000 0.000000 0.000000 -2.53376 REMARK 350 BIOMT1 51 0.809017 -0.500000 -0.309017 324.33390 REMARK 350 BIOMT2 51 0.500000 0.309017 0.809017 -198.88343 REMARK 350 BIOMT3 51 -0.309017 -0.809017 0.500000 524.78328 REMARK 350 BIOMT1 52 -0.809017 -0.500000 0.309017 651.01673 REMARK 350 BIOMT2 52 0.500000 -0.309017 0.809017 2.04985 REMARK 350 BIOMT3 52 -0.309017 0.809017 0.500000 -1.26688 REMARK 350 BIOMT1 53 0.309017 -0.809017 0.500000 326.38376 REMARK 350 BIOMT2 53 0.809017 0.500000 0.309017 -200.15031 REMARK 350 BIOMT3 53 -0.500000 0.309017 0.809017 123.69969 REMARK 350 BIOMT1 54 -0.500000 0.309017 0.809017 126.23345 REMARK 350 BIOMT2 54 0.309017 -0.809017 0.500000 326.38376 REMARK 350 BIOMT3 54 0.809017 0.500000 0.309017 -202.68406 REMARK 350 BIOMT1 55 0.809017 0.500000 0.309017 -200.15031 REMARK 350 BIOMT2 55 -0.500000 0.309017 0.809017 126.23345 REMARK 350 BIOMT3 55 0.309017 -0.809017 0.500000 323.85000 REMARK 350 BIOMT1 56 0.309017 0.809017 -0.500000 122.91672 REMARK 350 BIOMT2 56 -0.809017 0.500000 0.309017 325.89985 REMARK 350 BIOMT3 56 0.500000 0.309017 0.809017 -201.41719 REMARK 350 BIOMT1 57 0.309017 -0.809017 -0.500000 648.96688 REMARK 350 BIOMT2 57 0.809017 0.500000 -0.309017 -0.78297 REMARK 350 BIOMT3 57 0.500000 -0.309017 0.809017 -0.48390 REMARK 350 BIOMT1 58 -1.000000 0.000000 0.000000 650.23376 REMARK 350 BIOMT2 58 0.000000 -1.000000 0.000000 650.23376 REMARK 350 BIOMT3 58 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 59 -0.309017 -0.809017 0.500000 527.31704 REMARK 350 BIOMT2 59 0.809017 -0.500000 -0.309017 324.33390 REMARK 350 BIOMT3 59 0.500000 0.309017 0.809017 -201.41719 REMARK 350 BIOMT1 60 -0.309017 0.809017 0.500000 1.26688 REMARK 350 BIOMT2 60 -0.809017 -0.500000 0.309017 651.01673 REMARK 350 BIOMT3 60 0.500000 -0.309017 0.809017 -0.48390 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR G 76 OE1 GLN G 79 1.86 REMARK 500 OG SER d 92 OG SER d 95 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG F 22 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG F 53 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG G 6 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG G 24 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG G 53 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG G 78 NE - CZ - NH1 ANGL. DEV. = 5.4 DEGREES REMARK 500 TYR L 16 CB - CG - CD2 ANGL. DEV. = -4.9 DEGREES REMARK 500 ARG Q 22 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG V 78 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG V 90 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 ARG a 6 NE - CZ - NH2 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG a 90 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 8 109.40 -56.95 REMARK 500 ASP A 12 -0.93 -153.85 REMARK 500 LYS A 15 74.68 35.47 REMARK 500 THR A 72 -162.40 55.10 REMARK 500 SER A 92 -55.75 -120.84 REMARK 500 LEU A 106 79.21 -119.79 REMARK 500 SER A 113 75.15 39.96 REMARK 500 ALA A 131 -47.80 -144.62 REMARK 500 LYS A 134 -45.33 -139.64 REMARK 500 GLU A 136 -161.44 -115.96 REMARK 500 THR A 161 -162.89 70.01 REMARK 500 LEU A 162 49.58 -71.15 REMARK 500 ASP F 31 -5.81 67.75 REMARK 500 LEU F 39 -172.54 -66.39 REMARK 500 MET F 40 109.94 -49.00 REMARK 500 GLU F 43 45.80 -88.79 REMARK 500 VAL F 44 99.56 -64.93 REMARK 500 ALA F 71 38.68 -74.27 REMARK 500 SER F 109 -66.72 -90.94 REMARK 500 SER F 110 -8.71 -154.72 REMARK 500 PRO G 10 94.62 -37.66 REMARK 500 ASP G 31 -8.12 64.32 REMARK 500 SER G 109 -178.56 -55.30 REMARK 500 SER G 110 4.95 -69.92 REMARK 500 PRO G 149 -176.54 -56.39 REMARK 500 SER G 163 -153.06 -131.19 REMARK 500 THR G 168 -162.68 -105.78 REMARK 500 ILE L 8 124.30 -35.66 REMARK 500 PRO L 10 97.80 -50.94 REMARK 500 ASP L 31 -3.82 63.82 REMARK 500 VAL L 44 85.02 -67.29 REMARK 500 ALA L 71 49.52 -72.29 REMARK 500 ARG L 90 80.91 -66.76 REMARK 500 CYS L 151 3.61 -69.07 REMARK 500 LEU L 167 109.52 -51.91 REMARK 500 PRO Q 10 106.44 -44.03 REMARK 500 ASP Q 31 -17.22 66.68 REMARK 500 MET Q 40 73.85 -119.15 REMARK 500 LYS Q 107 108.08 -43.91 REMARK 500 SER Q 110 48.42 -78.66 REMARK 500 LEU Q 167 64.10 -66.27 REMARK 500 PRO V 10 97.79 -47.34 REMARK 500 ASP V 31 -12.93 66.80 REMARK 500 GLU V 43 8.27 -69.98 REMARK 500 VAL V 44 78.94 -65.50 REMARK 500 THR V 72 61.98 39.80 REMARK 500 SER V 73 -69.30 54.58 REMARK 500 ASP V 74 21.12 -152.55 REMARK 500 GLU V 89 -63.57 -94.94 REMARK 500 ARG V 90 22.17 42.69 REMARK 500 REMARK 500 THIS ENTRY HAS 76 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 88 0.07 SIDE CHAIN REMARK 500 TYR F 62 0.08 SIDE CHAIN REMARK 500 ARG Q 175 0.09 SIDE CHAIN REMARK 500 TYR X 88 0.07 SIDE CHAIN REMARK 500 ARG a 53 0.09 SIDE CHAIN REMARK 500 TYR a 88 0.10 SIDE CHAIN REMARK 500 TYR d 88 0.11 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ALA d 158 11.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-19643 RELATED DB: EMDB REMARK 900 ROOM TEMPERATURE TOMOGRAM FOLLICLE CELL REMARK 900 RELATED ID: EMD-19644 RELATED DB: EMDB REMARK 900 ROOM TEMPERATURE TOMOGRAM FOLLICLE CELL REMARK 900 RELATED ID: EMD-19645 RELATED DB: EMDB REMARK 900 ROOM TEMPERATURE TOMOGRAM FOLLICLE CELL REMARK 900 RELATED ID: EMD-19646 RELATED DB: EMDB REMARK 900 ROOM TEMPERATURE TOMOGRAM FOLLICLE CELL REMARK 900 RELATED ID: EMD-19647 RELATED DB: EMDB REMARK 900 EXAMPLE CRYO-TOMOGRAM OF ISOLATED FOLLICLE CELL REMARK 900 RELATED ID: EMD-19648 RELATED DB: EMDB REMARK 900 EXAMPLE CRYO-TOMOGRAM OF FOLLICLE CELL FROM INTACT TISSUE VIA LIFT- REMARK 900 OUT PREPARATIONS REMARK 900 RELATED ID: EMD-19649 RELATED DB: EMDB REMARK 900 INTERCAPSID CONTACT C1-C1 REMARK 900 RELATED ID: EMD-19650 RELATED DB: EMDB REMARK 900 INTERCAPSID CONTACT C1-C5 REMARK 900 RELATED ID: EMD-19651 RELATED DB: EMDB REMARK 900 INTERCAPSID CONTACT C5-C5 REMARK 900 RELATED ID: EMD-19708 RELATED DB: EMDB REMARK 900 THE STRUCTURE OF THE COPIA RETROTRANSPOSON ICOSAHEDRAL CAPSID (T=9) DBREF 8S41 A 1 187 UNP P04146 COPIA_DROME 1 187 DBREF 8S41 F 1 187 UNP P04146 COPIA_DROME 1 187 DBREF 8S41 G 1 187 UNP P04146 COPIA_DROME 1 187 DBREF 8S41 L 1 187 UNP P04146 COPIA_DROME 1 187 DBREF 8S41 Q 1 187 UNP P04146 COPIA_DROME 1 187 DBREF 8S41 V 1 187 UNP P04146 COPIA_DROME 1 187 DBREF 8S41 X 1 187 UNP P04146 COPIA_DROME 1 187 DBREF 8S41 a 1 187 UNP P04146 COPIA_DROME 1 187 DBREF 8S41 d 1 187 UNP P04146 COPIA_DROME 1 187 SEQRES 1 A 187 MET ASP LYS ALA LYS ARG ASN ILE LYS PRO PHE ASP GLY SEQRES 2 A 187 GLU LYS TYR ALA ILE TRP LYS PHE ARG ILE ARG ALA LEU SEQRES 3 A 187 LEU ALA GLU GLN ASP VAL LEU LYS VAL VAL ASP GLY LEU SEQRES 4 A 187 MET PRO ASN GLU VAL ASP ASP SER TRP LYS LYS ALA GLU SEQRES 5 A 187 ARG CYS ALA LYS SER THR ILE ILE GLU TYR LEU SER ASP SEQRES 6 A 187 SER PHE LEU ASN PHE ALA THR SER ASP ILE THR ALA ARG SEQRES 7 A 187 GLN ILE LEU GLU ASN LEU ASP ALA VAL TYR GLU ARG LYS SEQRES 8 A 187 SER LEU ALA SER GLN LEU ALA LEU ARG LYS ARG LEU LEU SEQRES 9 A 187 SER LEU LYS LEU SER SER GLU MET SER LEU LEU SER HIS SEQRES 10 A 187 PHE HIS ILE PHE ASP GLU LEU ILE SER GLU LEU LEU ALA SEQRES 11 A 187 ALA GLY ALA LYS ILE GLU GLU MET ASP LYS ILE SER HIS SEQRES 12 A 187 LEU LEU ILE THR LEU PRO SER CYS TYR ASP GLY ILE ILE SEQRES 13 A 187 THR ALA ILE GLU THR LEU SER GLU GLU ASN LEU THR LEU SEQRES 14 A 187 ALA PHE VAL LYS ASN ARG LEU LEU ASP GLN GLU ILE LYS SEQRES 15 A 187 ILE LYS ASN ASP HIS SEQRES 1 F 187 MET ASP LYS ALA LYS ARG ASN ILE LYS PRO PHE ASP GLY SEQRES 2 F 187 GLU LYS TYR ALA ILE TRP LYS PHE ARG ILE ARG ALA LEU SEQRES 3 F 187 LEU ALA GLU GLN ASP VAL LEU LYS VAL VAL ASP GLY LEU SEQRES 4 F 187 MET PRO ASN GLU VAL ASP ASP SER TRP LYS LYS ALA GLU SEQRES 5 F 187 ARG CYS ALA LYS SER THR ILE ILE GLU TYR LEU SER ASP SEQRES 6 F 187 SER PHE LEU ASN PHE ALA THR SER ASP ILE THR ALA ARG SEQRES 7 F 187 GLN ILE LEU GLU ASN LEU ASP ALA VAL TYR GLU ARG LYS SEQRES 8 F 187 SER LEU ALA SER GLN LEU ALA LEU ARG LYS ARG LEU LEU SEQRES 9 F 187 SER LEU LYS LEU SER SER GLU MET SER LEU LEU SER HIS SEQRES 10 F 187 PHE HIS ILE PHE ASP GLU LEU ILE SER GLU LEU LEU ALA SEQRES 11 F 187 ALA GLY ALA LYS ILE GLU GLU MET ASP LYS ILE SER HIS SEQRES 12 F 187 LEU LEU ILE THR LEU PRO SER CYS TYR ASP GLY ILE ILE SEQRES 13 F 187 THR ALA ILE GLU THR LEU SER GLU GLU ASN LEU THR LEU SEQRES 14 F 187 ALA PHE VAL LYS ASN ARG LEU LEU ASP GLN GLU ILE LYS SEQRES 15 F 187 ILE LYS ASN ASP HIS SEQRES 1 G 187 MET ASP LYS ALA LYS ARG ASN ILE LYS PRO PHE ASP GLY SEQRES 2 G 187 GLU LYS TYR ALA ILE TRP LYS PHE ARG ILE ARG ALA LEU SEQRES 3 G 187 LEU ALA GLU GLN ASP VAL LEU LYS VAL VAL ASP GLY LEU SEQRES 4 G 187 MET PRO ASN GLU VAL ASP ASP SER TRP LYS LYS ALA GLU SEQRES 5 G 187 ARG CYS ALA LYS SER THR ILE ILE GLU TYR LEU SER ASP SEQRES 6 G 187 SER PHE LEU ASN PHE ALA THR SER ASP ILE THR ALA ARG SEQRES 7 G 187 GLN ILE LEU GLU ASN LEU ASP ALA VAL TYR GLU ARG LYS SEQRES 8 G 187 SER LEU ALA SER GLN LEU ALA LEU ARG LYS ARG LEU LEU SEQRES 9 G 187 SER LEU LYS LEU SER SER GLU MET SER LEU LEU SER HIS SEQRES 10 G 187 PHE HIS ILE PHE ASP GLU LEU ILE SER GLU LEU LEU ALA SEQRES 11 G 187 ALA GLY ALA LYS ILE GLU GLU MET ASP LYS ILE SER HIS SEQRES 12 G 187 LEU LEU ILE THR LEU PRO SER CYS TYR ASP GLY ILE ILE SEQRES 13 G 187 THR ALA ILE GLU THR LEU SER GLU GLU ASN LEU THR LEU SEQRES 14 G 187 ALA PHE VAL LYS ASN ARG LEU LEU ASP GLN GLU ILE LYS SEQRES 15 G 187 ILE LYS ASN ASP HIS SEQRES 1 L 187 MET ASP LYS ALA LYS ARG ASN ILE LYS PRO PHE ASP GLY SEQRES 2 L 187 GLU LYS TYR ALA ILE TRP LYS PHE ARG ILE ARG ALA LEU SEQRES 3 L 187 LEU ALA GLU GLN ASP VAL LEU LYS VAL VAL ASP GLY LEU SEQRES 4 L 187 MET PRO ASN GLU VAL ASP ASP SER TRP LYS LYS ALA GLU SEQRES 5 L 187 ARG CYS ALA LYS SER THR ILE ILE GLU TYR LEU SER ASP SEQRES 6 L 187 SER PHE LEU ASN PHE ALA THR SER ASP ILE THR ALA ARG SEQRES 7 L 187 GLN ILE LEU GLU ASN LEU ASP ALA VAL TYR GLU ARG LYS SEQRES 8 L 187 SER LEU ALA SER GLN LEU ALA LEU ARG LYS ARG LEU LEU SEQRES 9 L 187 SER LEU LYS LEU SER SER GLU MET SER LEU LEU SER HIS SEQRES 10 L 187 PHE HIS ILE PHE ASP GLU LEU ILE SER GLU LEU LEU ALA SEQRES 11 L 187 ALA GLY ALA LYS ILE GLU GLU MET ASP LYS ILE SER HIS SEQRES 12 L 187 LEU LEU ILE THR LEU PRO SER CYS TYR ASP GLY ILE ILE SEQRES 13 L 187 THR ALA ILE GLU THR LEU SER GLU GLU ASN LEU THR LEU SEQRES 14 L 187 ALA PHE VAL LYS ASN ARG LEU LEU ASP GLN GLU ILE LYS SEQRES 15 L 187 ILE LYS ASN ASP HIS SEQRES 1 Q 187 MET ASP LYS ALA LYS ARG ASN ILE LYS PRO PHE ASP GLY SEQRES 2 Q 187 GLU LYS TYR ALA ILE TRP LYS PHE ARG ILE ARG ALA LEU SEQRES 3 Q 187 LEU ALA GLU GLN ASP VAL LEU LYS VAL VAL ASP GLY LEU SEQRES 4 Q 187 MET PRO ASN GLU VAL ASP ASP SER TRP LYS LYS ALA GLU SEQRES 5 Q 187 ARG CYS ALA LYS SER THR ILE ILE GLU TYR LEU SER ASP SEQRES 6 Q 187 SER PHE LEU ASN PHE ALA THR SER ASP ILE THR ALA ARG SEQRES 7 Q 187 GLN ILE LEU GLU ASN LEU ASP ALA VAL TYR GLU ARG LYS SEQRES 8 Q 187 SER LEU ALA SER GLN LEU ALA LEU ARG LYS ARG LEU LEU SEQRES 9 Q 187 SER LEU LYS LEU SER SER GLU MET SER LEU LEU SER HIS SEQRES 10 Q 187 PHE HIS ILE PHE ASP GLU LEU ILE SER GLU LEU LEU ALA SEQRES 11 Q 187 ALA GLY ALA LYS ILE GLU GLU MET ASP LYS ILE SER HIS SEQRES 12 Q 187 LEU LEU ILE THR LEU PRO SER CYS TYR ASP GLY ILE ILE SEQRES 13 Q 187 THR ALA ILE GLU THR LEU SER GLU GLU ASN LEU THR LEU SEQRES 14 Q 187 ALA PHE VAL LYS ASN ARG LEU LEU ASP GLN GLU ILE LYS SEQRES 15 Q 187 ILE LYS ASN ASP HIS SEQRES 1 V 187 MET ASP LYS ALA LYS ARG ASN ILE LYS PRO PHE ASP GLY SEQRES 2 V 187 GLU LYS TYR ALA ILE TRP LYS PHE ARG ILE ARG ALA LEU SEQRES 3 V 187 LEU ALA GLU GLN ASP VAL LEU LYS VAL VAL ASP GLY LEU SEQRES 4 V 187 MET PRO ASN GLU VAL ASP ASP SER TRP LYS LYS ALA GLU SEQRES 5 V 187 ARG CYS ALA LYS SER THR ILE ILE GLU TYR LEU SER ASP SEQRES 6 V 187 SER PHE LEU ASN PHE ALA THR SER ASP ILE THR ALA ARG SEQRES 7 V 187 GLN ILE LEU GLU ASN LEU ASP ALA VAL TYR GLU ARG LYS SEQRES 8 V 187 SER LEU ALA SER GLN LEU ALA LEU ARG LYS ARG LEU LEU SEQRES 9 V 187 SER LEU LYS LEU SER SER GLU MET SER LEU LEU SER HIS SEQRES 10 V 187 PHE HIS ILE PHE ASP GLU LEU ILE SER GLU LEU LEU ALA SEQRES 11 V 187 ALA GLY ALA LYS ILE GLU GLU MET ASP LYS ILE SER HIS SEQRES 12 V 187 LEU LEU ILE THR LEU PRO SER CYS TYR ASP GLY ILE ILE SEQRES 13 V 187 THR ALA ILE GLU THR LEU SER GLU GLU ASN LEU THR LEU SEQRES 14 V 187 ALA PHE VAL LYS ASN ARG LEU LEU ASP GLN GLU ILE LYS SEQRES 15 V 187 ILE LYS ASN ASP HIS SEQRES 1 X 187 MET ASP LYS ALA LYS ARG ASN ILE LYS PRO PHE ASP GLY SEQRES 2 X 187 GLU LYS TYR ALA ILE TRP LYS PHE ARG ILE ARG ALA LEU SEQRES 3 X 187 LEU ALA GLU GLN ASP VAL LEU LYS VAL VAL ASP GLY LEU SEQRES 4 X 187 MET PRO ASN GLU VAL ASP ASP SER TRP LYS LYS ALA GLU SEQRES 5 X 187 ARG CYS ALA LYS SER THR ILE ILE GLU TYR LEU SER ASP SEQRES 6 X 187 SER PHE LEU ASN PHE ALA THR SER ASP ILE THR ALA ARG SEQRES 7 X 187 GLN ILE LEU GLU ASN LEU ASP ALA VAL TYR GLU ARG LYS SEQRES 8 X 187 SER LEU ALA SER GLN LEU ALA LEU ARG LYS ARG LEU LEU SEQRES 9 X 187 SER LEU LYS LEU SER SER GLU MET SER LEU LEU SER HIS SEQRES 10 X 187 PHE HIS ILE PHE ASP GLU LEU ILE SER GLU LEU LEU ALA SEQRES 11 X 187 ALA GLY ALA LYS ILE GLU GLU MET ASP LYS ILE SER HIS SEQRES 12 X 187 LEU LEU ILE THR LEU PRO SER CYS TYR ASP GLY ILE ILE SEQRES 13 X 187 THR ALA ILE GLU THR LEU SER GLU GLU ASN LEU THR LEU SEQRES 14 X 187 ALA PHE VAL LYS ASN ARG LEU LEU ASP GLN GLU ILE LYS SEQRES 15 X 187 ILE LYS ASN ASP HIS SEQRES 1 a 187 MET ASP LYS ALA LYS ARG ASN ILE LYS PRO PHE ASP GLY SEQRES 2 a 187 GLU LYS TYR ALA ILE TRP LYS PHE ARG ILE ARG ALA LEU SEQRES 3 a 187 LEU ALA GLU GLN ASP VAL LEU LYS VAL VAL ASP GLY LEU SEQRES 4 a 187 MET PRO ASN GLU VAL ASP ASP SER TRP LYS LYS ALA GLU SEQRES 5 a 187 ARG CYS ALA LYS SER THR ILE ILE GLU TYR LEU SER ASP SEQRES 6 a 187 SER PHE LEU ASN PHE ALA THR SER ASP ILE THR ALA ARG SEQRES 7 a 187 GLN ILE LEU GLU ASN LEU ASP ALA VAL TYR GLU ARG LYS SEQRES 8 a 187 SER LEU ALA SER GLN LEU ALA LEU ARG LYS ARG LEU LEU SEQRES 9 a 187 SER LEU LYS LEU SER SER GLU MET SER LEU LEU SER HIS SEQRES 10 a 187 PHE HIS ILE PHE ASP GLU LEU ILE SER GLU LEU LEU ALA SEQRES 11 a 187 ALA GLY ALA LYS ILE GLU GLU MET ASP LYS ILE SER HIS SEQRES 12 a 187 LEU LEU ILE THR LEU PRO SER CYS TYR ASP GLY ILE ILE SEQRES 13 a 187 THR ALA ILE GLU THR LEU SER GLU GLU ASN LEU THR LEU SEQRES 14 a 187 ALA PHE VAL LYS ASN ARG LEU LEU ASP GLN GLU ILE LYS SEQRES 15 a 187 ILE LYS ASN ASP HIS SEQRES 1 d 187 MET ASP LYS ALA LYS ARG ASN ILE LYS PRO PHE ASP GLY SEQRES 2 d 187 GLU LYS TYR ALA ILE TRP LYS PHE ARG ILE ARG ALA LEU SEQRES 3 d 187 LEU ALA GLU GLN ASP VAL LEU LYS VAL VAL ASP GLY LEU SEQRES 4 d 187 MET PRO ASN GLU VAL ASP ASP SER TRP LYS LYS ALA GLU SEQRES 5 d 187 ARG CYS ALA LYS SER THR ILE ILE GLU TYR LEU SER ASP SEQRES 6 d 187 SER PHE LEU ASN PHE ALA THR SER ASP ILE THR ALA ARG SEQRES 7 d 187 GLN ILE LEU GLU ASN LEU ASP ALA VAL TYR GLU ARG LYS SEQRES 8 d 187 SER LEU ALA SER GLN LEU ALA LEU ARG LYS ARG LEU LEU SEQRES 9 d 187 SER LEU LYS LEU SER SER GLU MET SER LEU LEU SER HIS SEQRES 10 d 187 PHE HIS ILE PHE ASP GLU LEU ILE SER GLU LEU LEU ALA SEQRES 11 d 187 ALA GLY ALA LYS ILE GLU GLU MET ASP LYS ILE SER HIS SEQRES 12 d 187 LEU LEU ILE THR LEU PRO SER CYS TYR ASP GLY ILE ILE SEQRES 13 d 187 THR ALA ILE GLU THR LEU SER GLU GLU ASN LEU THR LEU SEQRES 14 d 187 ALA PHE VAL LYS ASN ARG LEU LEU ASP GLN GLU ILE LYS SEQRES 15 d 187 ILE LYS ASN ASP HIS HELIX 1 AA1 LYS A 15 GLU A 29 1 15 HELIX 2 AA2 ASP A 31 GLY A 38 1 8 HELIX 3 AA3 ASP A 45 TYR A 62 1 18 HELIX 4 AA4 SER A 64 THR A 72 1 9 HELIX 5 AA5 THR A 76 GLU A 89 1 14 HELIX 6 AA6 LEU A 93 LEU A 106 1 14 HELIX 7 AA7 SER A 113 ALA A 131 1 19 HELIX 8 AA8 GLU A 136 THR A 147 1 12 HELIX 9 AA9 PRO A 149 ILE A 156 1 8 HELIX 10 AB1 LEU A 162 LEU A 167 1 6 HELIX 11 AB2 THR A 168 HIS A 187 1 20 HELIX 12 AB3 LYS F 15 GLN F 30 1 16 HELIX 13 AB4 LEU F 33 GLY F 38 1 6 HELIX 14 AB5 ASP F 45 LEU F 63 1 19 HELIX 15 AB6 SER F 64 ALA F 71 1 8 HELIX 16 AB7 THR F 76 TYR F 88 1 13 HELIX 17 AB8 SER F 92 LEU F 106 1 15 HELIX 18 AB9 SER F 113 ALA F 131 1 19 HELIX 19 AC1 GLU F 136 LEU F 148 1 13 HELIX 20 AC2 PRO F 149 THR F 161 1 13 HELIX 21 AC3 THR F 168 HIS F 187 1 20 HELIX 22 AC4 LYS G 15 GLN G 30 1 16 HELIX 23 AC5 ASP G 31 GLY G 38 1 8 HELIX 24 AC6 ASP G 45 LEU G 63 1 19 HELIX 25 AC7 SER G 64 ALA G 71 1 8 HELIX 26 AC8 THR G 76 ARG G 90 1 15 HELIX 27 AC9 SER G 92 LEU G 106 1 15 HELIX 28 AD1 SER G 113 ALA G 131 1 19 HELIX 29 AD2 GLU G 136 THR G 147 1 12 HELIX 30 AD3 TYR G 152 GLU G 160 1 9 HELIX 31 AD4 THR G 168 HIS G 187 1 20 HELIX 32 AD5 LYS L 15 GLN L 30 1 16 HELIX 33 AD6 VAL L 32 GLY L 38 1 7 HELIX 34 AD7 ASP L 45 TYR L 62 1 18 HELIX 35 AD8 SER L 64 ALA L 71 1 8 HELIX 36 AD9 THR L 76 GLU L 89 1 14 HELIX 37 AE1 SER L 92 LEU L 106 1 15 HELIX 38 AE2 SER L 113 GLY L 132 1 20 HELIX 39 AE3 GLU L 136 LEU L 148 1 13 HELIX 40 AE4 PRO L 149 CYS L 151 5 3 HELIX 41 AE5 TYR L 152 LEU L 162 1 11 HELIX 42 AE6 THR L 168 HIS L 187 1 20 HELIX 43 AE7 LYS Q 15 GLN Q 30 1 16 HELIX 44 AE8 VAL Q 32 GLY Q 38 1 7 HELIX 45 AE9 ASP Q 45 TYR Q 62 1 18 HELIX 46 AF1 SER Q 64 ALA Q 71 1 8 HELIX 47 AF2 THR Q 76 ARG Q 90 1 15 HELIX 48 AF3 SER Q 92 LEU Q 106 1 15 HELIX 49 AF4 SER Q 113 GLY Q 132 1 20 HELIX 50 AF5 GLU Q 136 LEU Q 148 1 13 HELIX 51 AF6 PRO Q 149 THR Q 161 1 13 HELIX 52 AF7 THR Q 168 HIS Q 187 1 20 HELIX 53 AF8 LYS V 15 GLN V 30 1 16 HELIX 54 AF9 VAL V 32 LEU V 39 1 8 HELIX 55 AG1 ASP V 45 LEU V 63 1 19 HELIX 56 AG2 ASP V 65 ALA V 71 1 7 HELIX 57 AG3 THR V 76 GLU V 89 1 14 HELIX 58 AG4 SER V 92 LEU V 106 1 15 HELIX 59 AG5 SER V 113 ALA V 131 1 19 HELIX 60 AG6 GLU V 136 THR V 147 1 12 HELIX 61 AG7 PRO V 149 THR V 161 1 13 HELIX 62 AG8 LEU V 162 LEU V 167 5 6 HELIX 63 AG9 THR V 168 HIS V 187 1 20 HELIX 64 AH1 LYS X 15 GLN X 30 1 16 HELIX 65 AH2 ASP X 31 VAL X 36 5 6 HELIX 66 AH3 ASP X 45 TYR X 62 1 18 HELIX 67 AH4 SER X 64 PHE X 70 5 7 HELIX 68 AH5 THR X 76 GLU X 89 1 14 HELIX 69 AH6 SER X 92 LEU X 106 1 15 HELIX 70 AH7 SER X 113 ALA X 131 1 19 HELIX 71 AH8 GLU X 136 LEU X 148 1 13 HELIX 72 AH9 PRO X 149 CYS X 151 5 3 HELIX 73 AI1 TYR X 152 LEU X 162 1 11 HELIX 74 AI2 THR X 168 HIS X 187 1 20 HELIX 75 AI3 LYS a 15 GLN a 30 1 16 HELIX 76 AI4 VAL a 32 ASP a 37 1 6 HELIX 77 AI5 ASP a 45 LEU a 63 1 19 HELIX 78 AI6 SER a 64 ALA a 71 1 8 HELIX 79 AI7 THR a 76 GLU a 89 1 14 HELIX 80 AI8 SER a 92 LEU a 106 1 15 HELIX 81 AI9 SER a 113 ALA a 131 1 19 HELIX 82 AJ1 GLU a 136 LEU a 148 1 13 HELIX 83 AJ2 PRO a 149 CYS a 151 5 3 HELIX 84 AJ3 TYR a 152 GLU a 160 1 9 HELIX 85 AJ4 THR a 168 HIS a 187 1 20 HELIX 86 AJ5 LYS d 15 GLN d 30 1 16 HELIX 87 AJ6 LEU d 33 GLY d 38 1 6 HELIX 88 AJ7 ASP d 45 LEU d 63 1 19 HELIX 89 AJ8 SER d 64 SER d 66 5 3 HELIX 90 AJ9 PHE d 67 THR d 72 1 6 HELIX 91 AK1 THR d 76 GLU d 89 1 14 HELIX 92 AK2 SER d 92 LEU d 106 1 15 HELIX 93 AK3 SER d 113 ALA d 131 1 19 HELIX 94 AK4 GLU d 136 LEU d 148 1 13 HELIX 95 AK5 PRO d 149 CYS d 151 5 3 HELIX 96 AK6 TYR d 152 ALA d 158 1 7 HELIX 97 AK7 THR d 168 HIS d 187 1 20 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MASTER 442 0 0 97 0 0 0 613509 9 0 135 END