HEADER TRANSPORT PROTEIN 21-FEB-24 8S4J TITLE STRUCTURE, SUBSTRATE SELECTIVITY DETERMINANTS AND MEMBRANE TITLE 2 INTERACTIONS OF A GLUTAMATE-SPECIFIC TAXI TRAP BINDING PROTEIN FROM TITLE 3 VIBRIO CHOLERAE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: TAXI FAMILY TRAP TRANSPORTER SOLUTE-BINDING SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE; SOURCE 3 ORGANISM_TAXID: 666; SOURCE 4 GENE: D6U24_12840, I7465_15265; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS SUBSTRATE BINDING PROTEIN TAXI-TRAP GLUTAMATE PERIPLASMIC, TRANSPORT KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.MULLIGAN,A.DAAB,J.DAVIES REVDAT 2 04-DEC-24 8S4J 1 JRNL REVDAT 1 06-NOV-24 8S4J 0 JRNL AUTH J.F.S.DAVIES,A.DAAB,N.MASSOUH,C.KIRKLAND,B.STRONGITHARM, JRNL AUTH 2 A.LEECH,M.FARRE,G.H.THOMAS,C.MULLIGAN JRNL TITL STRUCTURE AND SELECTIVITY OF A GLUTAMATE-SPECIFIC TAXI TRAP JRNL TITL 2 BINDING PROTEIN FROM VIBRIO CHOLERAE. JRNL REF J.GEN.PHYSIOL. V. 156 2024 JRNL REFN ESSN 1540-7748 JRNL PMID 39556531 JRNL DOI 10.1085/JGP.202413584 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 69.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 61140 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 3035 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 69.6400 - 4.7600 1.00 2789 139 0.1580 0.1714 REMARK 3 2 4.7600 - 3.7800 1.00 2701 131 0.1250 0.1291 REMARK 3 3 3.7800 - 3.3000 1.00 2684 132 0.1556 0.1792 REMARK 3 4 3.3000 - 3.0000 1.00 2674 123 0.1861 0.2179 REMARK 3 5 3.0000 - 2.7900 1.00 2631 146 0.2156 0.2504 REMARK 3 6 2.7900 - 2.6200 1.00 2656 136 0.2183 0.2362 REMARK 3 7 2.6200 - 2.4900 1.00 2629 149 0.2121 0.2369 REMARK 3 8 2.4900 - 2.3800 1.00 2633 155 0.2035 0.2126 REMARK 3 9 2.3800 - 2.2900 1.00 2636 129 0.1974 0.2176 REMARK 3 10 2.2900 - 2.2100 1.00 2606 156 0.2018 0.2267 REMARK 3 11 2.2100 - 2.1400 1.00 2626 152 0.2378 0.2702 REMARK 3 12 2.1400 - 2.0800 1.00 2623 137 0.2263 0.2452 REMARK 3 13 2.0800 - 2.0300 1.00 2634 129 0.2175 0.2211 REMARK 3 14 2.0300 - 1.9800 1.00 2599 142 0.2116 0.2661 REMARK 3 15 1.9800 - 1.9300 1.00 2615 128 0.2188 0.2637 REMARK 3 16 1.9300 - 1.8900 1.00 2633 144 0.2288 0.2694 REMARK 3 17 1.8900 - 1.8500 1.00 2620 136 0.2324 0.2814 REMARK 3 18 1.8500 - 1.8200 1.00 2651 132 0.2588 0.2759 REMARK 3 19 1.8200 - 1.7900 1.00 2624 119 0.2715 0.3045 REMARK 3 20 1.7900 - 1.7500 1.00 2610 129 0.3060 0.3407 REMARK 3 21 1.7500 - 1.7300 1.00 2627 144 0.3434 0.3259 REMARK 3 22 1.7300 - 1.7000 1.00 2604 147 0.3927 0.3923 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.256 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.777 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2503 REMARK 3 ANGLE : 0.964 3425 REMARK 3 CHIRALITY : 0.062 379 REMARK 3 PLANARITY : 0.006 455 REMARK 3 DIHEDRAL : 6.074 375 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8S4J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-FEB-24. REMARK 100 THE DEPOSITION ID IS D_1292136629. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-OCT-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 ANGSTROMS REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61144 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 69.640 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 20.50 REMARK 200 R MERGE (I) : 0.06415 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 26.3100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.90570 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.420 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: DIMPLE V2.6.2 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.4 M SODIUM MALONATE, PH 7.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 63.33000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 36.56359 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 60.09333 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 63.33000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 36.56359 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 60.09333 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 63.33000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 36.56359 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 60.09333 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 63.33000 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 36.56359 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 60.09333 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 63.33000 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 36.56359 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 60.09333 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 63.33000 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 36.56359 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 60.09333 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 73.12719 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 120.18667 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 73.12719 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 120.18667 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 73.12719 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 120.18667 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 73.12719 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 120.18667 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 73.12719 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 120.18667 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 73.12719 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 120.18667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 109 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 38 -105.01 -128.10 REMARK 500 SER A 105 -122.94 60.95 REMARK 500 MET A 122 -130.21 -140.63 REMARK 500 ASP A 192 2.78 -68.65 REMARK 500 CYS A 216 18.96 -140.37 REMARK 500 SER A 257 -150.90 -154.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 758 DISTANCE = 5.92 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 404 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 106 OE1 REMARK 620 2 HOH A 614 O 135.3 REMARK 620 3 HOH A 688 O 109.7 115.0 REMARK 620 4 HOH A 703 O 72.2 117.9 74.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 402 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 232 O REMARK 620 2 ASN A 235 O 90.6 REMARK 620 3 TYR A 238 O 99.5 96.9 REMARK 620 4 HOH A 678 O 166.8 102.1 82.7 REMARK 620 5 HOH A 700 O 90.5 109.7 151.5 82.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 406 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 298 OD1 REMARK 620 2 HOH A 567 O 76.6 REMARK 620 3 HOH A 574 O 60.4 20.3 REMARK 620 4 HOH A 587 O 70.7 6.2 17.3 REMARK 620 5 HOH A 690 O 78.8 20.2 19.6 23.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 403 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 306 O REMARK 620 2 ASN A 309 O 94.4 REMARK 620 3 HOH A 698 O 175.5 84.5 REMARK 620 4 HOH A 702 O 91.3 88.0 84.3 REMARK 620 5 HOH A 716 O 92.0 92.7 92.4 176.5 REMARK 620 6 HOH A 717 O 92.7 167.5 89.2 102.1 76.7 REMARK 620 N 1 2 3 4 5 DBREF1 8S4J A 30 328 UNP A0A0H6LKE4_VIBCL DBREF2 8S4J A A0A0H6LKE4 30 328 SEQADV 8S4J ARG A 29 UNP A0A0H6LKE EXPRESSION TAG SEQRES 1 A 300 ARG ALA GLN ASP PHE ILE THR ILE GLY THR GLY SER VAL SEQRES 2 A 300 THR GLY VAL TYR TYR PRO THR GLY GLY ALA ILE CYS LYS SEQRES 3 A 300 LEU VAL ASN LYS ASP ARG LYS ASP HIS ASN ILE ARG CYS SEQRES 4 A 300 SER VAL GLU SER THR GLY GLY SER ILE TYR ASN VAL ASN SEQRES 5 A 300 THR ILE ARG SER GLY GLU LEU ASP PHE GLY ILE VAL GLN SEQRES 6 A 300 SER ASP TRP GLN TYR HIS GLY TYR ASN GLY THR SER GLU SEQRES 7 A 300 PHE ALA GLU GLN GLY PRO TYR LYS LYS LEU ARG ALA VAL SEQRES 8 A 300 PHE SER MET HIS THR GLU PRO PHE ASN ILE ILE ALA ARG SEQRES 9 A 300 ALA ASP SER GLY ILE GLU ASN VAL LYS ASP LEU ALA GLY SEQRES 10 A 300 LYS ARG VAL ASN ILE GLY ASN PRO GLY SER GLY ASP ARG SEQRES 11 A 300 ALA THR MET GLN VAL VAL MET ASP ALA PHE GLY TRP ASN SEQRES 12 A 300 ASN ASP SER PHE LYS LEU ALA ALA GLU LEU LYS GLY SER SEQRES 13 A 300 GLU ARG SER GLN ALA LEU CYS ASP ASN LYS ILE ASP ALA SEQRES 14 A 300 PHE ILE TYR MET VAL GLY HIS PRO ASN GLY ALA ILE LYS SEQRES 15 A 300 GLU ALA THR THR SER CYS ALA ALA LYS LEU VAL PRO ALA SEQRES 16 A 300 THR GLY PRO GLU ILE GLU LYS ILE VAL ALA ASN ASN PRO SEQRES 17 A 300 TYR TYR ALA TYR SER VAL VAL PRO ALA GLY MET TYR SER SEQRES 18 A 300 GLY THR ASP GLN GLU VAL LYS SER PHE GLY VAL ALA ALA SEQRES 19 A 300 THR LEU VAL THR THR GLU GLU VAL SER GLU ALA VAL VAL SEQRES 20 A 300 TYR ASN LEU THR LYS ALA VAL PHE GLU ASN PHE ASP THR SEQRES 21 A 300 PHE THR ARG LEU HIS PRO ALA PHE ALA ASN LEU LYS LYS SEQRES 22 A 300 GLU ASP MET VAL THR ALA GLY ASN SER ILE PRO LEU HIS SEQRES 23 A 300 PRO GLY ALA VAL LYS TYR TYR LYS GLU ALA GLY LEU ILE SEQRES 24 A 300 LYS HET GLU A 401 10 HET NA A 402 1 HET NA A 403 1 HET NA A 404 1 HET NA A 405 1 HET NA A 406 1 HETNAM GLU GLUTAMIC ACID HETNAM NA SODIUM ION FORMUL 2 GLU C5 H9 N O4 FORMUL 3 NA 5(NA 1+) FORMUL 8 HOH *258(H2 O) HELIX 1 AA1 VAL A 44 LYS A 58 1 15 HELIX 2 AA2 ASP A 59 ASN A 64 1 6 HELIX 3 AA3 GLY A 74 SER A 84 1 11 HELIX 4 AA4 SER A 94 GLY A 103 1 10 HELIX 5 AA5 THR A 104 ALA A 108 5 5 HELIX 6 AA6 ASN A 139 ALA A 144 5 6 HELIX 7 AA7 SER A 155 GLY A 169 1 15 HELIX 8 AA8 ASN A 171 PHE A 175 5 5 HELIX 9 AA9 LYS A 182 SER A 184 5 3 HELIX 10 AB1 GLU A 185 LEU A 190 1 6 HELIX 11 AB2 ASN A 206 ALA A 217 1 12 HELIX 12 AB3 GLY A 225 ASN A 235 1 11 HELIX 13 AB4 SER A 271 GLU A 284 1 14 HELIX 14 AB5 ASN A 285 THR A 290 1 6 HELIX 15 AB6 ARG A 291 LEU A 292 5 2 HELIX 16 AB7 HIS A 293 ALA A 297 5 5 HELIX 17 AB8 LYS A 300 ALA A 307 1 8 HELIX 18 AB9 HIS A 314 ALA A 324 1 11 SHEET 1 AA1 6 ARG A 66 GLU A 70 0 SHEET 2 AA1 6 PHE A 33 GLY A 37 1 N ILE A 36 O SER A 68 SHEET 3 AA1 6 PHE A 89 GLN A 93 1 O PHE A 89 N GLY A 37 SHEET 4 AA1 6 VAL A 255 THR A 267 -1 O THR A 263 N VAL A 92 SHEET 5 AA1 6 LEU A 116 ALA A 131 -1 N GLU A 125 O VAL A 260 SHEET 6 AA1 6 LYS A 219 VAL A 221 -1 O VAL A 221 N ILE A 129 SHEET 1 AA2 6 LEU A 177 ALA A 179 0 SHEET 2 AA2 6 ARG A 147 ASN A 149 1 N VAL A 148 O LEU A 177 SHEET 3 AA2 6 ALA A 197 MET A 201 1 O ALA A 197 N ASN A 149 SHEET 4 AA2 6 LEU A 116 ALA A 131 -1 N ILE A 130 O PHE A 198 SHEET 5 AA2 6 VAL A 255 THR A 267 -1 O VAL A 260 N GLU A 125 SHEET 6 AA2 6 ALA A 239 VAL A 243 -1 N ALA A 239 O GLY A 259 SSBOND 1 CYS A 53 CYS A 67 1555 1555 2.05 LINK OE1 GLU A 106 NA NA A 404 1555 1555 2.29 LINK O VAL A 232 NA NA A 402 1555 1555 2.28 LINK O ASN A 235 NA NA A 402 1555 1555 2.31 LINK O TYR A 238 NA NA A 402 1555 1555 2.31 LINK OD1 ASN A 298 NA NA A 406 1555 11445 2.38 LINK O THR A 306 NA NA A 403 1555 1555 2.42 LINK O ASN A 309 NA NA A 403 1555 1555 2.37 LINK NA NA A 402 O HOH A 678 1555 1555 2.37 LINK NA NA A 402 O HOH A 700 1555 1555 2.31 LINK NA NA A 403 O HOH A 698 1555 1555 2.35 LINK NA NA A 403 O HOH A 702 1555 1555 2.34 LINK NA NA A 403 O HOH A 716 1555 1555 2.52 LINK NA NA A 403 O HOH A 717 1555 1555 2.42 LINK NA NA A 404 O HOH A 614 1555 1555 2.53 LINK NA NA A 404 O HOH A 688 1555 1555 3.15 LINK NA NA A 404 O HOH A 703 1555 1555 3.16 LINK NA NA A 405 O HOH A 713 1555 1555 3.16 LINK NA NA A 406 O HOH A 567 1555 1555 2.60 LINK NA NA A 406 O HOH A 574 1555 1555 2.31 LINK NA NA A 406 O HOH A 587 1555 1555 2.50 LINK NA NA A 406 O HOH A 690 1555 1555 2.37 CISPEP 1 HIS A 204 PRO A 205 0 -7.77 CRYST1 126.660 126.660 180.280 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007895 0.004558 0.000000 0.00000 SCALE2 0.000000 0.009117 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005547 0.00000