data_8S70 # _entry.id 8S70 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.404 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8S70 pdb_00008s70 10.2210/pdb8s70/pdb WWPDB D_1292136931 ? ? EMDB EMD-19761 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-01-15 ? 2 'EM metadata' 1 0 2025-01-15 ? 3 'Additional map' 1 0 2025-01-15 1 4 'Additional map' 1 0 2025-01-15 2 5 FSC 1 0 2025-01-15 ? 6 'Half map' 1 0 2025-01-15 1 7 'Half map' 1 0 2025-01-15 2 8 Image 1 0 2025-01-15 ? 9 Mask 1 0 2025-01-15 ? 10 'Primary map' 1 0 2025-01-15 ? 11 'Structure model' 1 1 2025-02-12 ? 12 'Additional map' 1 0 2025-01-15 1 13 'Additional map' 1 0 2025-01-15 2 14 FSC 1 0 2025-01-15 ? 15 'Half map' 1 0 2025-01-15 1 16 'Half map' 1 0 2025-01-15 2 17 Image 1 0 2025-01-15 ? 18 Mask 1 0 2025-01-15 ? 19 'Primary map' 1 0 2025-01-15 ? 20 'Structure model' 1 2 2025-03-12 ? 21 'Additional map' 1 0 2025-01-15 1 22 'Additional map' 1 0 2025-01-15 2 23 FSC 1 0 2025-01-15 ? 24 'Half map' 1 0 2025-01-15 1 25 'Half map' 1 0 2025-01-15 2 26 Image 1 0 2025-01-15 ? 27 Mask 1 0 2025-01-15 ? 28 'Primary map' 1 0 2025-01-15 ? 29 'Structure model' 1 3 2025-07-09 ? 30 'EM metadata' 1 1 2025-07-09 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 'Additional map' repository 'Initial release' ? ? 4 4 'Additional map' repository 'Initial release' ? ? 5 5 FSC repository 'Initial release' ? ? 6 6 'Half map' repository 'Initial release' ? ? 7 7 'Half map' repository 'Initial release' ? ? 8 8 Image repository 'Initial release' ? ? 9 9 Mask repository 'Initial release' ? ? 10 10 'Primary map' repository 'Initial release' ? ? 11 12 'Additional map' repository 'Initial release' ? ? 12 13 'Additional map' repository 'Initial release' ? ? 13 14 FSC repository 'Initial release' ? ? 14 15 'Half map' repository 'Initial release' ? ? 15 16 'Half map' repository 'Initial release' ? ? 16 17 Image repository 'Initial release' ? ? 17 18 Mask repository 'Initial release' ? ? 18 19 'Primary map' repository 'Initial release' ? ? 19 21 'Additional map' repository 'Initial release' ? ? 20 22 'Additional map' repository 'Initial release' ? ? 21 23 FSC repository 'Initial release' ? ? 22 24 'Half map' repository 'Initial release' ? ? 23 25 'Half map' repository 'Initial release' ? ? 24 26 Image repository 'Initial release' ? ? 25 27 Mask repository 'Initial release' ? ? 26 28 'Primary map' repository 'Initial release' ? ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 11 'Structure model' 'Data collection' 2 11 'Structure model' 'Database references' 3 20 'Structure model' 'Data collection' 4 29 'Structure model' 'Data collection' 5 30 'EM metadata' 'Data processing' 6 30 'EM metadata' 'Experimental summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 11 'Structure model' citation 2 11 'Structure model' em_admin 3 20 'Structure model' em_admin 4 29 'Structure model' em_admin 5 29 'Structure model' em_software 6 30 'EM metadata' em_admin 7 30 'EM metadata' em_software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 11 'Structure model' '_citation.journal_volume' 2 11 'Structure model' '_citation.page_last' 3 11 'Structure model' '_citation.pdbx_database_id_PubMed' 4 11 'Structure model' '_citation.title' 5 11 'Structure model' '_em_admin.last_update' 6 20 'Structure model' '_em_admin.last_update' 7 29 'Structure model' '_em_admin.last_update' 8 29 'Structure model' '_em_software.name' 9 30 'EM metadata' '_em_admin.last_update' 10 30 'EM metadata' '_em_software.name' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8S70 _pdbx_database_status.recvd_initial_deposition_date 2024-02-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of Pseudomonas aeruginosa recombinase A (RecA) in complex with ssDNA 72mer and ATPgS' _pdbx_database_related.db_id EMD-19761 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 4 _pdbx_contact_author.email laura.cendron@unipd.it _pdbx_contact_author.name_first Laura _pdbx_contact_author.name_last Cendron _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-0125-0461 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'De Felice, S.' 1 0000-0003-1373-7469 'Vascon, F.' 2 0000-0002-5747-507X 'Huber, S.T.' 3 0000-0003-3721-5104 'Grinzato, A.' 4 0000-0001-6307-3053 'Jakobi, A.J.' 5 0000-0002-7761-2027 'Cendron, L.' 6 0000-0002-0125-0461 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Iscience _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2589-0042 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 28 _citation.language ? _citation.page_first 111726 _citation.page_last 111726 _citation.title 'Snapshots of Pseudomonas aeruginosa SOS response reveal structural requisites for LexA autoproteolysis.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.isci.2024.111726 _citation.pdbx_database_id_PubMed 39898034 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vascon, F.' 1 ? primary 'De Felice, S.' 2 ? primary 'Gasparotto, M.' 3 ? primary 'Huber, S.T.' 4 ? primary 'Catalano, C.' 5 ? primary 'Chinellato, M.' 6 ? primary 'Mezzetti, R.' 7 ? primary 'Grinzato, A.' 8 ? primary 'Filippini, F.' 9 ? primary 'Maso, L.' 10 ? primary 'Jakobi, A.J.' 11 ? primary 'Cendron, L.' 12 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein RecA' 35062.066 1 ? ? ? ? 2 polymer syn DNA 1171.814 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 non-polymer syn 'PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER' 523.247 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Recombinase A' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GDENKKRALAAALGQIERQFGKGAVMRMGDHERQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA EAQKQGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD AHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE TRVKVVKNKVSPPFRQAEFQILYGKGIYRTGEIIDLGVQLGLVEKSGAWYSYQGSKIGQGKANAAKYLEDNPEIGSVLEK TIRDQLLA ; ;GDENKKRALAAALGQIERQFGKGAVMRMGDHERQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA EAQKQGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD AHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE TRVKVVKNKVSPPFRQAEFQILYGKGIYRTGEIIDLGVQLGLVEKSGAWYSYQGSKIGQGKANAAKYLEDNPEIGSVLEK TIRDQLLA ; D ? 2 polydeoxyribonucleotide no no '(DT)(DT)(DT)(DT)' TTTT T ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'MAGNESIUM ION' MG 4 'PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER' AGS # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ASP n 1 3 GLU n 1 4 ASN n 1 5 LYS n 1 6 LYS n 1 7 ARG n 1 8 ALA n 1 9 LEU n 1 10 ALA n 1 11 ALA n 1 12 ALA n 1 13 LEU n 1 14 GLY n 1 15 GLN n 1 16 ILE n 1 17 GLU n 1 18 ARG n 1 19 GLN n 1 20 PHE n 1 21 GLY n 1 22 LYS n 1 23 GLY n 1 24 ALA n 1 25 VAL n 1 26 MET n 1 27 ARG n 1 28 MET n 1 29 GLY n 1 30 ASP n 1 31 HIS n 1 32 GLU n 1 33 ARG n 1 34 GLN n 1 35 ALA n 1 36 ILE n 1 37 PRO n 1 38 ALA n 1 39 ILE n 1 40 SER n 1 41 THR n 1 42 GLY n 1 43 SER n 1 44 LEU n 1 45 GLY n 1 46 LEU n 1 47 ASP n 1 48 ILE n 1 49 ALA n 1 50 LEU n 1 51 GLY n 1 52 ILE n 1 53 GLY n 1 54 GLY n 1 55 LEU n 1 56 PRO n 1 57 LYS n 1 58 GLY n 1 59 ARG n 1 60 ILE n 1 61 VAL n 1 62 GLU n 1 63 ILE n 1 64 TYR n 1 65 GLY n 1 66 PRO n 1 67 GLU n 1 68 SER n 1 69 SER n 1 70 GLY n 1 71 LYS n 1 72 THR n 1 73 THR n 1 74 LEU n 1 75 THR n 1 76 LEU n 1 77 SER n 1 78 VAL n 1 79 ILE n 1 80 ALA n 1 81 GLU n 1 82 ALA n 1 83 GLN n 1 84 LYS n 1 85 GLN n 1 86 GLY n 1 87 ALA n 1 88 THR n 1 89 CYS n 1 90 ALA n 1 91 PHE n 1 92 VAL n 1 93 ASP n 1 94 ALA n 1 95 GLU n 1 96 HIS n 1 97 ALA n 1 98 LEU n 1 99 ASP n 1 100 PRO n 1 101 ASP n 1 102 TYR n 1 103 ALA n 1 104 GLY n 1 105 LYS n 1 106 LEU n 1 107 GLY n 1 108 VAL n 1 109 ASN n 1 110 VAL n 1 111 ASP n 1 112 ASP n 1 113 LEU n 1 114 LEU n 1 115 VAL n 1 116 SER n 1 117 GLN n 1 118 PRO n 1 119 ASP n 1 120 THR n 1 121 GLY n 1 122 GLU n 1 123 GLN n 1 124 ALA n 1 125 LEU n 1 126 GLU n 1 127 ILE n 1 128 THR n 1 129 ASP n 1 130 MET n 1 131 LEU n 1 132 VAL n 1 133 ARG n 1 134 SER n 1 135 ASN n 1 136 ALA n 1 137 VAL n 1 138 ASP n 1 139 VAL n 1 140 ILE n 1 141 ILE n 1 142 VAL n 1 143 ASP n 1 144 SER n 1 145 VAL n 1 146 ALA n 1 147 ALA n 1 148 LEU n 1 149 VAL n 1 150 PRO n 1 151 LYS n 1 152 ALA n 1 153 GLU n 1 154 ILE n 1 155 GLU n 1 156 GLY n 1 157 GLU n 1 158 MET n 1 159 GLY n 1 160 ASP n 1 161 ALA n 1 162 HIS n 1 163 VAL n 1 164 GLY n 1 165 LEU n 1 166 GLN n 1 167 ALA n 1 168 ARG n 1 169 LEU n 1 170 MET n 1 171 SER n 1 172 GLN n 1 173 ALA n 1 174 LEU n 1 175 ARG n 1 176 LYS n 1 177 ILE n 1 178 THR n 1 179 GLY n 1 180 ASN n 1 181 ILE n 1 182 LYS n 1 183 ASN n 1 184 ALA n 1 185 ASN n 1 186 CYS n 1 187 LEU n 1 188 VAL n 1 189 ILE n 1 190 PHE n 1 191 ILE n 1 192 ASN n 1 193 GLN n 1 194 ILE n 1 195 ARG n 1 196 MET n 1 197 LYS n 1 198 ILE n 1 199 GLY n 1 200 VAL n 1 201 MET n 1 202 PHE n 1 203 GLY n 1 204 ASN n 1 205 PRO n 1 206 GLU n 1 207 THR n 1 208 THR n 1 209 THR n 1 210 GLY n 1 211 GLY n 1 212 ASN n 1 213 ALA n 1 214 LEU n 1 215 LYS n 1 216 PHE n 1 217 TYR n 1 218 ALA n 1 219 SER n 1 220 VAL n 1 221 ARG n 1 222 LEU n 1 223 ASP n 1 224 ILE n 1 225 ARG n 1 226 ARG n 1 227 THR n 1 228 GLY n 1 229 ALA n 1 230 VAL n 1 231 LYS n 1 232 GLU n 1 233 GLY n 1 234 ASP n 1 235 GLU n 1 236 VAL n 1 237 VAL n 1 238 GLY n 1 239 SER n 1 240 GLU n 1 241 THR n 1 242 ARG n 1 243 VAL n 1 244 LYS n 1 245 VAL n 1 246 VAL n 1 247 LYS n 1 248 ASN n 1 249 LYS n 1 250 VAL n 1 251 SER n 1 252 PRO n 1 253 PRO n 1 254 PHE n 1 255 ARG n 1 256 GLN n 1 257 ALA n 1 258 GLU n 1 259 PHE n 1 260 GLN n 1 261 ILE n 1 262 LEU n 1 263 TYR n 1 264 GLY n 1 265 LYS n 1 266 GLY n 1 267 ILE n 1 268 TYR n 1 269 ARG n 1 270 THR n 1 271 GLY n 1 272 GLU n 1 273 ILE n 1 274 ILE n 1 275 ASP n 1 276 LEU n 1 277 GLY n 1 278 VAL n 1 279 GLN n 1 280 LEU n 1 281 GLY n 1 282 LEU n 1 283 VAL n 1 284 GLU n 1 285 LYS n 1 286 SER n 1 287 GLY n 1 288 ALA n 1 289 TRP n 1 290 TYR n 1 291 SER n 1 292 TYR n 1 293 GLN n 1 294 GLY n 1 295 SER n 1 296 LYS n 1 297 ILE n 1 298 GLY n 1 299 GLN n 1 300 GLY n 1 301 LYS n 1 302 ALA n 1 303 ASN n 1 304 ALA n 1 305 ALA n 1 306 LYS n 1 307 TYR n 1 308 LEU n 1 309 GLU n 1 310 ASP n 1 311 ASN n 1 312 PRO n 1 313 GLU n 1 314 ILE n 1 315 GLY n 1 316 SER n 1 317 VAL n 1 318 LEU n 1 319 GLU n 1 320 LYS n 1 321 THR n 1 322 ILE n 1 323 ARG n 1 324 ASP n 1 325 GLN n 1 326 LEU n 1 327 LEU n 1 328 ALA n 2 1 DT n 2 2 DT n 2 3 DT n 2 4 DT n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 328 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'recA, PA3617' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pseudomonas aeruginosa' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 287 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 4 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight AGS non-polymer . 'PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER' ;ATP-GAMMA-S; ADENOSINE 5'-(3-THIOTRIPHOSPHATE); ADENOSINE 5'-(GAMMA-THIOTRIPHOSPHATE); ADENOSINE-5'-DIPHOSPHATE MONOTHIOPHOSPHATE ; 'C10 H16 N5 O12 P3 S' 523.247 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY D . n A 1 2 ASP 2 2 2 ASP ASP D . n A 1 3 GLU 3 3 3 GLU GLU D . n A 1 4 ASN 4 4 4 ASN ASN D . n A 1 5 LYS 5 5 5 LYS LYS D . n A 1 6 LYS 6 6 6 LYS LYS D . n A 1 7 ARG 7 7 7 ARG ARG D . n A 1 8 ALA 8 8 8 ALA ALA D . n A 1 9 LEU 9 9 9 LEU LEU D . n A 1 10 ALA 10 10 10 ALA ALA D . n A 1 11 ALA 11 11 11 ALA ALA D . n A 1 12 ALA 12 12 12 ALA ALA D . n A 1 13 LEU 13 13 13 LEU LEU D . n A 1 14 GLY 14 14 14 GLY GLY D . n A 1 15 GLN 15 15 15 GLN GLN D . n A 1 16 ILE 16 16 16 ILE ILE D . n A 1 17 GLU 17 17 17 GLU GLU D . n A 1 18 ARG 18 18 18 ARG ARG D . n A 1 19 GLN 19 19 19 GLN GLN D . n A 1 20 PHE 20 20 20 PHE PHE D . n A 1 21 GLY 21 21 21 GLY GLY D . n A 1 22 LYS 22 22 22 LYS LYS D . n A 1 23 GLY 23 23 23 GLY GLY D . n A 1 24 ALA 24 24 24 ALA ALA D . n A 1 25 VAL 25 25 25 VAL VAL D . n A 1 26 MET 26 26 26 MET MET D . n A 1 27 ARG 27 27 27 ARG ARG D . n A 1 28 MET 28 28 28 MET MET D . n A 1 29 GLY 29 29 29 GLY GLY D . n A 1 30 ASP 30 30 30 ASP ASP D . n A 1 31 HIS 31 31 31 HIS HIS D . n A 1 32 GLU 32 32 32 GLU GLU D . n A 1 33 ARG 33 33 33 ARG ARG D . n A 1 34 GLN 34 34 34 GLN GLN D . n A 1 35 ALA 35 35 35 ALA ALA D . n A 1 36 ILE 36 36 36 ILE ILE D . n A 1 37 PRO 37 37 37 PRO PRO D . n A 1 38 ALA 38 38 38 ALA ALA D . n A 1 39 ILE 39 39 39 ILE ILE D . n A 1 40 SER 40 40 40 SER SER D . n A 1 41 THR 41 41 41 THR THR D . n A 1 42 GLY 42 42 42 GLY GLY D . n A 1 43 SER 43 43 43 SER SER D . n A 1 44 LEU 44 44 44 LEU LEU D . n A 1 45 GLY 45 45 45 GLY GLY D . n A 1 46 LEU 46 46 46 LEU LEU D . n A 1 47 ASP 47 47 47 ASP ASP D . n A 1 48 ILE 48 48 48 ILE ILE D . n A 1 49 ALA 49 49 49 ALA ALA D . n A 1 50 LEU 50 50 50 LEU LEU D . n A 1 51 GLY 51 51 51 GLY GLY D . n A 1 52 ILE 52 52 52 ILE ILE D . n A 1 53 GLY 53 53 53 GLY GLY D . n A 1 54 GLY 54 54 54 GLY GLY D . n A 1 55 LEU 55 55 55 LEU LEU D . n A 1 56 PRO 56 56 56 PRO PRO D . n A 1 57 LYS 57 57 57 LYS LYS D . n A 1 58 GLY 58 58 58 GLY GLY D . n A 1 59 ARG 59 59 59 ARG ARG D . n A 1 60 ILE 60 60 60 ILE ILE D . n A 1 61 VAL 61 61 61 VAL VAL D . n A 1 62 GLU 62 62 62 GLU GLU D . n A 1 63 ILE 63 63 63 ILE ILE D . n A 1 64 TYR 64 64 64 TYR TYR D . n A 1 65 GLY 65 65 65 GLY GLY D . n A 1 66 PRO 66 66 66 PRO PRO D . n A 1 67 GLU 67 67 67 GLU GLU D . n A 1 68 SER 68 68 68 SER SER D . n A 1 69 SER 69 69 69 SER SER D . n A 1 70 GLY 70 70 70 GLY GLY D . n A 1 71 LYS 71 71 71 LYS LYS D . n A 1 72 THR 72 72 72 THR THR D . n A 1 73 THR 73 73 73 THR THR D . n A 1 74 LEU 74 74 74 LEU LEU D . n A 1 75 THR 75 75 75 THR THR D . n A 1 76 LEU 76 76 76 LEU LEU D . n A 1 77 SER 77 77 77 SER SER D . n A 1 78 VAL 78 78 78 VAL VAL D . n A 1 79 ILE 79 79 79 ILE ILE D . n A 1 80 ALA 80 80 80 ALA ALA D . n A 1 81 GLU 81 81 81 GLU GLU D . n A 1 82 ALA 82 82 82 ALA ALA D . n A 1 83 GLN 83 83 83 GLN GLN D . n A 1 84 LYS 84 84 84 LYS LYS D . n A 1 85 GLN 85 85 85 GLN GLN D . n A 1 86 GLY 86 86 86 GLY GLY D . n A 1 87 ALA 87 87 87 ALA ALA D . n A 1 88 THR 88 88 88 THR THR D . n A 1 89 CYS 89 89 89 CYS CYS D . n A 1 90 ALA 90 90 90 ALA ALA D . n A 1 91 PHE 91 91 91 PHE PHE D . n A 1 92 VAL 92 92 92 VAL VAL D . n A 1 93 ASP 93 93 93 ASP ASP D . n A 1 94 ALA 94 94 94 ALA ALA D . n A 1 95 GLU 95 95 95 GLU GLU D . n A 1 96 HIS 96 96 96 HIS HIS D . n A 1 97 ALA 97 97 97 ALA ALA D . n A 1 98 LEU 98 98 98 LEU LEU D . n A 1 99 ASP 99 99 99 ASP ASP D . n A 1 100 PRO 100 100 100 PRO PRO D . n A 1 101 ASP 101 101 101 ASP ASP D . n A 1 102 TYR 102 102 102 TYR TYR D . n A 1 103 ALA 103 103 103 ALA ALA D . n A 1 104 GLY 104 104 104 GLY GLY D . n A 1 105 LYS 105 105 105 LYS LYS D . n A 1 106 LEU 106 106 106 LEU LEU D . n A 1 107 GLY 107 107 107 GLY GLY D . n A 1 108 VAL 108 108 108 VAL VAL D . n A 1 109 ASN 109 109 109 ASN ASN D . n A 1 110 VAL 110 110 110 VAL VAL D . n A 1 111 ASP 111 111 111 ASP ASP D . n A 1 112 ASP 112 112 112 ASP ASP D . n A 1 113 LEU 113 113 113 LEU LEU D . n A 1 114 LEU 114 114 114 LEU LEU D . n A 1 115 VAL 115 115 115 VAL VAL D . n A 1 116 SER 116 116 116 SER SER D . n A 1 117 GLN 117 117 117 GLN GLN D . n A 1 118 PRO 118 118 118 PRO PRO D . n A 1 119 ASP 119 119 119 ASP ASP D . n A 1 120 THR 120 120 120 THR THR D . n A 1 121 GLY 121 121 121 GLY GLY D . n A 1 122 GLU 122 122 122 GLU GLU D . n A 1 123 GLN 123 123 123 GLN GLN D . n A 1 124 ALA 124 124 124 ALA ALA D . n A 1 125 LEU 125 125 125 LEU LEU D . n A 1 126 GLU 126 126 126 GLU GLU D . n A 1 127 ILE 127 127 127 ILE ILE D . n A 1 128 THR 128 128 128 THR THR D . n A 1 129 ASP 129 129 129 ASP ASP D . n A 1 130 MET 130 130 130 MET MET D . n A 1 131 LEU 131 131 131 LEU LEU D . n A 1 132 VAL 132 132 132 VAL VAL D . n A 1 133 ARG 133 133 133 ARG ARG D . n A 1 134 SER 134 134 134 SER SER D . n A 1 135 ASN 135 135 135 ASN ASN D . n A 1 136 ALA 136 136 136 ALA ALA D . n A 1 137 VAL 137 137 137 VAL VAL D . n A 1 138 ASP 138 138 138 ASP ASP D . n A 1 139 VAL 139 139 139 VAL VAL D . n A 1 140 ILE 140 140 140 ILE ILE D . n A 1 141 ILE 141 141 141 ILE ILE D . n A 1 142 VAL 142 142 142 VAL VAL D . n A 1 143 ASP 143 143 143 ASP ASP D . n A 1 144 SER 144 144 144 SER SER D . n A 1 145 VAL 145 145 145 VAL VAL D . n A 1 146 ALA 146 146 146 ALA ALA D . n A 1 147 ALA 147 147 147 ALA ALA D . n A 1 148 LEU 148 148 148 LEU LEU D . n A 1 149 VAL 149 149 149 VAL VAL D . n A 1 150 PRO 150 150 150 PRO PRO D . n A 1 151 LYS 151 151 151 LYS LYS D . n A 1 152 ALA 152 152 152 ALA ALA D . n A 1 153 GLU 153 153 153 GLU GLU D . n A 1 154 ILE 154 154 154 ILE ILE D . n A 1 155 GLU 155 155 155 GLU GLU D . n A 1 156 GLY 156 156 156 GLY GLY D . n A 1 157 GLU 157 157 157 GLU GLU D . n A 1 158 MET 158 158 158 MET MET D . n A 1 159 GLY 159 159 159 GLY GLY D . n A 1 160 ASP 160 160 160 ASP ASP D . n A 1 161 ALA 161 161 161 ALA ALA D . n A 1 162 HIS 162 162 162 HIS HIS D . n A 1 163 VAL 163 163 163 VAL VAL D . n A 1 164 GLY 164 164 164 GLY GLY D . n A 1 165 LEU 165 165 165 LEU LEU D . n A 1 166 GLN 166 166 166 GLN GLN D . n A 1 167 ALA 167 167 167 ALA ALA D . n A 1 168 ARG 168 168 168 ARG ARG D . n A 1 169 LEU 169 169 169 LEU LEU D . n A 1 170 MET 170 170 170 MET MET D . n A 1 171 SER 171 171 171 SER SER D . n A 1 172 GLN 172 172 172 GLN GLN D . n A 1 173 ALA 173 173 173 ALA ALA D . n A 1 174 LEU 174 174 174 LEU LEU D . n A 1 175 ARG 175 175 175 ARG ARG D . n A 1 176 LYS 176 176 176 LYS LYS D . n A 1 177 ILE 177 177 177 ILE ILE D . n A 1 178 THR 178 178 178 THR THR D . n A 1 179 GLY 179 179 179 GLY GLY D . n A 1 180 ASN 180 180 180 ASN ASN D . n A 1 181 ILE 181 181 181 ILE ILE D . n A 1 182 LYS 182 182 182 LYS LYS D . n A 1 183 ASN 183 183 183 ASN ASN D . n A 1 184 ALA 184 184 184 ALA ALA D . n A 1 185 ASN 185 185 185 ASN ASN D . n A 1 186 CYS 186 186 186 CYS CYS D . n A 1 187 LEU 187 187 187 LEU LEU D . n A 1 188 VAL 188 188 188 VAL VAL D . n A 1 189 ILE 189 189 189 ILE ILE D . n A 1 190 PHE 190 190 190 PHE PHE D . n A 1 191 ILE 191 191 191 ILE ILE D . n A 1 192 ASN 192 192 192 ASN ASN D . n A 1 193 GLN 193 193 193 GLN GLN D . n A 1 194 ILE 194 194 194 ILE ILE D . n A 1 195 ARG 195 195 195 ARG ARG D . n A 1 196 MET 196 196 196 MET MET D . n A 1 197 LYS 197 197 197 LYS LYS D . n A 1 198 ILE 198 198 198 ILE ILE D . n A 1 199 GLY 199 199 199 GLY GLY D . n A 1 200 VAL 200 200 200 VAL VAL D . n A 1 201 MET 201 201 201 MET MET D . n A 1 202 PHE 202 202 202 PHE PHE D . n A 1 203 GLY 203 203 203 GLY GLY D . n A 1 204 ASN 204 204 204 ASN ASN D . n A 1 205 PRO 205 205 205 PRO PRO D . n A 1 206 GLU 206 206 206 GLU GLU D . n A 1 207 THR 207 207 207 THR THR D . n A 1 208 THR 208 208 208 THR THR D . n A 1 209 THR 209 209 209 THR THR D . n A 1 210 GLY 210 210 210 GLY GLY D . n A 1 211 GLY 211 211 211 GLY GLY D . n A 1 212 ASN 212 212 212 ASN ASN D . n A 1 213 ALA 213 213 213 ALA ALA D . n A 1 214 LEU 214 214 214 LEU LEU D . n A 1 215 LYS 215 215 215 LYS LYS D . n A 1 216 PHE 216 216 216 PHE PHE D . n A 1 217 TYR 217 217 217 TYR TYR D . n A 1 218 ALA 218 218 218 ALA ALA D . n A 1 219 SER 219 219 219 SER SER D . n A 1 220 VAL 220 220 220 VAL VAL D . n A 1 221 ARG 221 221 221 ARG ARG D . n A 1 222 LEU 222 222 222 LEU LEU D . n A 1 223 ASP 223 223 223 ASP ASP D . n A 1 224 ILE 224 224 224 ILE ILE D . n A 1 225 ARG 225 225 225 ARG ARG D . n A 1 226 ARG 226 226 226 ARG ARG D . n A 1 227 THR 227 227 227 THR THR D . n A 1 228 GLY 228 228 228 GLY GLY D . n A 1 229 ALA 229 229 229 ALA ALA D . n A 1 230 VAL 230 230 230 VAL VAL D . n A 1 231 LYS 231 231 231 LYS LYS D . n A 1 232 GLU 232 232 232 GLU GLU D . n A 1 233 GLY 233 233 233 GLY GLY D . n A 1 234 ASP 234 234 234 ASP ASP D . n A 1 235 GLU 235 235 235 GLU GLU D . n A 1 236 VAL 236 236 236 VAL VAL D . n A 1 237 VAL 237 237 237 VAL VAL D . n A 1 238 GLY 238 238 238 GLY GLY D . n A 1 239 SER 239 239 239 SER SER D . n A 1 240 GLU 240 240 240 GLU GLU D . n A 1 241 THR 241 241 241 THR THR D . n A 1 242 ARG 242 242 242 ARG ARG D . n A 1 243 VAL 243 243 243 VAL VAL D . n A 1 244 LYS 244 244 244 LYS LYS D . n A 1 245 VAL 245 245 245 VAL VAL D . n A 1 246 VAL 246 246 246 VAL VAL D . n A 1 247 LYS 247 247 247 LYS LYS D . n A 1 248 ASN 248 248 248 ASN ASN D . n A 1 249 LYS 249 249 249 LYS LYS D . n A 1 250 VAL 250 250 250 VAL VAL D . n A 1 251 SER 251 251 251 SER SER D . n A 1 252 PRO 252 252 252 PRO PRO D . n A 1 253 PRO 253 253 253 PRO PRO D . n A 1 254 PHE 254 254 254 PHE PHE D . n A 1 255 ARG 255 255 255 ARG ARG D . n A 1 256 GLN 256 256 256 GLN GLN D . n A 1 257 ALA 257 257 257 ALA ALA D . n A 1 258 GLU 258 258 258 GLU GLU D . n A 1 259 PHE 259 259 259 PHE PHE D . n A 1 260 GLN 260 260 260 GLN GLN D . n A 1 261 ILE 261 261 261 ILE ILE D . n A 1 262 LEU 262 262 262 LEU LEU D . n A 1 263 TYR 263 263 263 TYR TYR D . n A 1 264 GLY 264 264 264 GLY GLY D . n A 1 265 LYS 265 265 265 LYS LYS D . n A 1 266 GLY 266 266 266 GLY GLY D . n A 1 267 ILE 267 267 267 ILE ILE D . n A 1 268 TYR 268 268 268 TYR TYR D . n A 1 269 ARG 269 269 269 ARG ARG D . n A 1 270 THR 270 270 270 THR THR D . n A 1 271 GLY 271 271 271 GLY GLY D . n A 1 272 GLU 272 272 272 GLU GLU D . n A 1 273 ILE 273 273 273 ILE ILE D . n A 1 274 ILE 274 274 274 ILE ILE D . n A 1 275 ASP 275 275 275 ASP ASP D . n A 1 276 LEU 276 276 276 LEU LEU D . n A 1 277 GLY 277 277 277 GLY GLY D . n A 1 278 VAL 278 278 278 VAL VAL D . n A 1 279 GLN 279 279 279 GLN GLN D . n A 1 280 LEU 280 280 280 LEU LEU D . n A 1 281 GLY 281 281 281 GLY GLY D . n A 1 282 LEU 282 282 282 LEU LEU D . n A 1 283 VAL 283 283 283 VAL VAL D . n A 1 284 GLU 284 284 284 GLU GLU D . n A 1 285 LYS 285 285 285 LYS LYS D . n A 1 286 SER 286 286 286 SER SER D . n A 1 287 GLY 287 287 287 GLY GLY D . n A 1 288 ALA 288 288 288 ALA ALA D . n A 1 289 TRP 289 289 289 TRP TRP D . n A 1 290 TYR 290 290 290 TYR TYR D . n A 1 291 SER 291 291 291 SER SER D . n A 1 292 TYR 292 292 292 TYR TYR D . n A 1 293 GLN 293 293 293 GLN GLN D . n A 1 294 GLY 294 294 294 GLY GLY D . n A 1 295 SER 295 295 295 SER SER D . n A 1 296 LYS 296 296 296 LYS LYS D . n A 1 297 ILE 297 297 297 ILE ILE D . n A 1 298 GLY 298 298 298 GLY GLY D . n A 1 299 GLN 299 299 299 GLN GLN D . n A 1 300 GLY 300 300 300 GLY GLY D . n A 1 301 LYS 301 301 301 LYS LYS D . n A 1 302 ALA 302 302 302 ALA ALA D . n A 1 303 ASN 303 303 303 ASN ASN D . n A 1 304 ALA 304 304 304 ALA ALA D . n A 1 305 ALA 305 305 305 ALA ALA D . n A 1 306 LYS 306 306 306 LYS LYS D . n A 1 307 TYR 307 307 307 TYR TYR D . n A 1 308 LEU 308 308 308 LEU LEU D . n A 1 309 GLU 309 309 309 GLU GLU D . n A 1 310 ASP 310 310 310 ASP ASP D . n A 1 311 ASN 311 311 311 ASN ASN D . n A 1 312 PRO 312 312 312 PRO PRO D . n A 1 313 GLU 313 313 313 GLU GLU D . n A 1 314 ILE 314 314 314 ILE ILE D . n A 1 315 GLY 315 315 315 GLY GLY D . n A 1 316 SER 316 316 316 SER SER D . n A 1 317 VAL 317 317 317 VAL VAL D . n A 1 318 LEU 318 318 318 LEU LEU D . n A 1 319 GLU 319 319 319 GLU GLU D . n A 1 320 LYS 320 320 320 LYS LYS D . n A 1 321 THR 321 321 321 THR THR D . n A 1 322 ILE 322 322 322 ILE ILE D . n A 1 323 ARG 323 323 323 ARG ARG D . n A 1 324 ASP 324 324 324 ASP ASP D . n A 1 325 GLN 325 325 325 GLN GLN D . n A 1 326 LEU 326 326 326 LEU LEU D . n A 1 327 LEU 327 327 327 LEU LEU D . n A 1 328 ALA 328 328 328 ALA ALA D . n B 2 1 DT 1 33 33 DT DT T . n B 2 2 DT 2 34 34 DT DT T . n B 2 3 DT 3 35 35 DT DT T . n B 2 4 DT 4 36 36 DT DT T . n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 AGS ? ? AGS ? ? 'SUBJECT OF INVESTIGATION' ? 2 MG ? ? MG ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG 1 401 401 MG MG D . D 4 AGS 1 402 402 AGS AGS D . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8S70 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8S70 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8S70 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 8S70 _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.004 ? 30910 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.603 ? 41892 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 12.671 ? 4628 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.044 ? 4838 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.004 ? 5323 ? f_plane_restr ? ? # _struct.entry_id 8S70 _struct.title 'Cryo-EM structure of Pseudomonas aeruginosa recombinase A (RecA) in complex with ssDNA 72mer and ATPgS' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8S70 _struct_keywords.text 'recombinase, co-protease activator, DNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP RECA_PSEAE P08280 ? 1 ;DENKKRALAAALGQIERQFGKGAVMRMGDHERQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIAE AQKQGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDA HVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSET RVKVVKNKVSPPFRQAEFQILYGKGIYRTGEIIDLGVQLGLVEKSGAWYSYQGSKIGQGKANAAKYLEDNPEIGSVLEKT IRDQLLA ; 2 2 PDB 8S70 8S70 ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8S70 D 2 ? 328 ? P08280 2 ? 328 ? 2 328 2 2 8S70 T 1 ? 4 ? 8S70 33 ? 36 ? 33 36 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 8S70 _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id D _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P08280 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 1 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 32-meric _pdbx_struct_assembly.oligomeric_count 32 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'point symmetry operation' ? ? 0.98768834 -0.15643447 0.0 26.56739024 0.15643447 0.98768834 0.0 -22.69069487 0.0 0.0 1.0 -185.16000000 2 'point symmetry operation' ? ? 0.37055744 -0.92880955 0.0 245.33121685 0.92880955 0.37055744 0.0 -47.13233970 0.0 0.0 1.0 -169.73000000 3 'point symmetry operation' ? ? -0.60876143 -0.79335334 0.0 378.18895514 0.79335334 -0.60876143 0.0 128.37785148 0.0 0.0 1.0 -154.30000000 4 'point symmetry operation' ? ? -0.99306846 0.11753740 0.0 295.28361459 -0.11753740 -0.99306846 0.0 332.29379087 0.0 0.0 1.0 -138.87000000 5 'point symmetry operation' ? ? -0.40673664 0.91354546 0.0 77.64802144 -0.91354546 -0.40673664 0.0 365.30521960 0.0 0.0 1.0 -123.44000000 6 'point symmetry operation' ? ? 0.57714519 0.81664156 0.0 -61.99778613 -0.81664156 0.57714519 0.0 195.14631075 0.0 0.0 1.0 -108.01000000 7 'point symmetry operation' ? ? 0.99691733 -0.07845910 0.0 12.83793521 0.07845910 0.99691733 0.0 -11.86726524 0.0 0.0 1.0 -92.58000000 8 'point symmetry operation' ? ? 0.44228869 -0.89687274 0.0 229.00971659 0.89687274 0.44228869 0.0 -53.39757664 0.0 0.0 1.0 -77.15000000 9 'point symmetry operation' ? ? -0.54463904 -0.83867057 0.0 375.22826971 0.83867057 -0.54463904 0.0 111.14767718 0.0 0.0 1.0 -61.72000000 10 'point symmetry operation' ? ? -0.99922904 0.03925982 0.0 308.57755886 -0.03925982 -0.99922904 0.0 320.93968984 0.0 0.0 1.0 -46.29000000 11 'point symmetry operation' ? ? -0.47715876 0.87881711 0.0 94.20291046 -0.87881711 -0.47715876 0.0 370.92484718 0.0 0.0 1.0 -30.86000000 12 'point symmetry operation' ? ? 0.51129309 0.85940641 0.0 -58.36292980 -0.85940641 0.51129309 0.0 212.24696525 0.0 0.0 1.0 -15.43000000 13 'identity operation' 1_555 x,y,z 1.0 0.0 0.0 0.0 0.0 1.0 0.0 0.0 0.0 0.0 1.0 0.0 14 'point symmetry operation' ? ? 0.51129309 -0.85940641 0.0 212.24696525 0.85940641 0.51129309 0.0 -58.36292980 0.0 0.0 1.0 15.43000000 15 'point symmetry operation' ? ? -0.47715876 -0.87881711 0.0 370.92484718 0.87881711 -0.47715876 0.0 94.20291046 0.0 0.0 1.0 30.86000000 16 'point symmetry operation' ? ? -0.99922904 -0.03925982 0.0 320.93968984 0.03925982 -0.99922904 0.0 308.57755886 0.0 0.0 1.0 46.29000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 1 ? GLY A 21 ? GLY D 1 GLY D 21 1 ? 21 HELX_P HELX_P2 AA2 LYS A 22 ? VAL A 25 ? LYS D 22 VAL D 25 5 ? 4 HELX_P HELX_P3 AA3 SER A 43 ? LEU A 50 ? SER D 43 LEU D 50 1 ? 8 HELX_P HELX_P4 AA4 GLY A 70 ? GLY A 86 ? GLY D 70 GLY D 86 1 ? 17 HELX_P HELX_P5 AA5 ASP A 99 ? LEU A 106 ? ASP D 99 LEU D 106 1 ? 8 HELX_P HELX_P6 AA6 THR A 120 ? ASN A 135 ? THR D 120 ASN D 135 1 ? 16 HELX_P HELX_P7 AA7 PRO A 150 ? GLY A 156 ? PRO D 150 GLY D 156 1 ? 7 HELX_P HELX_P8 AA8 LEU A 165 ? ASN A 185 ? LEU D 165 ASN D 185 1 ? 21 HELX_P HELX_P9 AA9 ASN A 212 ? ALA A 218 ? ASN D 212 ALA D 218 1 ? 7 HELX_P HELX_P10 AB1 TYR A 268 ? LEU A 280 ? TYR D 268 LEU D 280 1 ? 13 HELX_P HELX_P11 AB2 GLY A 300 ? ASP A 310 ? GLY D 300 ASP D 310 1 ? 11 HELX_P HELX_P12 AB3 ASN A 311 ? LEU A 327 ? ASN D 311 LEU D 327 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? C MG . MG ? ? ? 1_555 D AGS . O2B ? ? D MG 401 D AGS 402 1_555 ? ? ? ? ? ? ? 2.356 ? ? metalc2 metalc ? ? C MG . MG ? ? ? 1_555 D AGS . O3B ? ? D MG 401 D AGS 402 1_555 ? ? ? ? ? ? ? 1.985 ? ? metalc3 metalc ? ? C MG . MG ? ? ? 1_555 D AGS . O3A ? ? D MG 401 D AGS 402 1_555 ? ? ? ? ? ? ? 2.074 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O2B ? D AGS . ? D AGS 402 ? 1_555 MG ? C MG . ? D MG 401 ? 1_555 O3B ? D AGS . ? D AGS 402 ? 1_555 69.7 ? 2 O2B ? D AGS . ? D AGS 402 ? 1_555 MG ? C MG . ? D MG 401 ? 1_555 O3A ? D AGS . ? D AGS 402 ? 1_555 68.0 ? 3 O3B ? D AGS . ? D AGS 402 ? 1_555 MG ? C MG . ? D MG 401 ? 1_555 O3A ? D AGS . ? D AGS 402 ? 1_555 77.6 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 8 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? parallel AA2 4 5 ? parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel AA2 7 8 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ALA A 38 ? ILE A 39 ? ALA D 38 ILE D 39 AA1 2 LEU A 55 ? PRO A 56 ? LEU D 55 PRO D 56 AA2 1 CYS A 89 ? ASP A 93 ? CYS D 89 ASP D 93 AA2 2 VAL A 139 ? ASP A 143 ? VAL D 139 ASP D 143 AA2 3 LEU A 187 ? ASN A 192 ? LEU D 187 ASN D 192 AA2 4 ILE A 60 ? TYR A 64 ? ILE D 60 TYR D 64 AA2 5 VAL A 220 ? LYS A 231 ? VAL D 220 LYS D 231 AA2 6 VAL A 236 ? ASN A 248 ? VAL D 236 ASN D 248 AA2 7 ALA A 257 ? LEU A 262 ? ALA D 257 LEU D 262 AA2 8 GLY A 266 ? ILE A 267 ? GLY D 266 ILE D 267 AA3 1 LYS A 285 ? SER A 286 ? LYS D 285 SER D 286 AA3 2 TRP A 289 ? TYR A 290 ? TRP D 289 TYR D 290 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 39 ? N ILE D 39 O LEU A 55 ? O LEU D 55 AA2 1 2 N VAL A 92 ? N VAL D 92 O ILE A 141 ? O ILE D 141 AA2 2 3 N ILE A 140 ? N ILE D 140 O LEU A 187 ? O LEU D 187 AA2 3 4 O PHE A 190 ? O PHE D 190 N ILE A 63 ? N ILE D 63 AA2 4 5 N GLU A 62 ? N GLU D 62 O LEU A 222 ? O LEU D 222 AA2 5 6 N ARG A 225 ? N ARG D 225 O ARG A 242 ? O ARG D 242 AA2 6 7 N VAL A 243 ? N VAL D 243 O ALA A 257 ? O ALA D 257 AA2 7 8 N LEU A 262 ? N LEU D 262 O GLY A 266 ? O GLY D 266 AA3 1 2 N SER A 286 ? N SER D 286 O TRP A 289 ? O TRP D 289 # _pdbx_entry_details.entry_id 8S70 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id D _pdbx_validate_torsion.auth_seq_id 135 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 64.68 _pdbx_validate_torsion.psi -5.02 # loop_ _em_3d_fitting.id _em_3d_fitting.entry_id _em_3d_fitting.method _em_3d_fitting.target_criteria _em_3d_fitting.details _em_3d_fitting.overall_b_value _em_3d_fitting.ref_space _em_3d_fitting.ref_protocol 1 8S70 ? ? ? ? REAL ? 2 8S70 ? ? ? ? ? OTHER # loop_ _em_3d_fitting_list.id _em_3d_fitting_list.3d_fitting_id _em_3d_fitting_list.pdb_entry_id _em_3d_fitting_list.pdb_chain_id _em_3d_fitting_list.pdb_chain_residue_range _em_3d_fitting_list.details _em_3d_fitting_list.chain_id _em_3d_fitting_list.chain_residue_range _em_3d_fitting_list.source_name _em_3d_fitting_list.type _em_3d_fitting_list.accession_code _em_3d_fitting_list.initial_refinement_model_id 1 1 . . . ? ? ? SwissModel 'in silico model' ? ? 2 2 . . . ? ? ? ? ? ? ? # _em_3d_reconstruction.entry_id 8S70 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 4.2 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 202842 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type HELICAL # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.5 # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.name _em_entity_assembly.details _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details _em_entity_assembly.entity_id_list 1 0 'MULTIPLE SOURCES' COMPLEX 'recombinase A (RecA) assembled onto ssDNA 72-mer in presence of ATPgS and Mg2+' ? ? ? '1, 2' 2 1 RECOMBINANT COMPLEX 'Recombinase A (RecA)' ? ? ? 1 3 1 RECOMBINANT COMPLEX ssDNA ? ? ? 2 # _em_imaging.entry_id 8S70 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1000 _em_imaging.nominal_defocus_max 2000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 8S70 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 298.15 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8S70 _em_experiment.id 1 _em_experiment.reconstruction_method HELICAL _em_experiment.aggregation_state 'HELICAL ARRAY' _em_experiment.entity_assembly_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal AGS PG P N N 1 AGS S1G S N N 2 AGS O2G O N N 3 AGS O3G O N N 4 AGS PB P N N 5 AGS O1B O N N 6 AGS O2B O N N 7 AGS O3B O N N 8 AGS PA P N N 9 AGS O1A O N N 10 AGS O2A O N N 11 AGS O3A O N N 12 AGS "O5'" O N N 13 AGS "C5'" C N N 14 AGS "C4'" C N R 15 AGS "O4'" O N N 16 AGS "C3'" C N S 17 AGS "O3'" O N N 18 AGS "C2'" C N R 19 AGS "O2'" O N N 20 AGS "C1'" C N R 21 AGS N9 N Y N 22 AGS C8 C Y N 23 AGS N7 N Y N 24 AGS C5 C Y N 25 AGS C6 C Y N 26 AGS N6 N N N 27 AGS N1 N Y N 28 AGS C2 C Y N 29 AGS N3 N Y N 30 AGS C4 C Y N 31 AGS HOG2 H N N 32 AGS H21 H N N 33 AGS HOB2 H N N 34 AGS HOA2 H N N 35 AGS "H5'1" H N N 36 AGS "H5'2" H N N 37 AGS "H4'" H N N 38 AGS "H3'" H N N 39 AGS "HO3'" H N N 40 AGS "H2'" H N N 41 AGS "HO2'" H N N 42 AGS "H1'" H N N 43 AGS H8 H N N 44 AGS HN61 H N N 45 AGS HN62 H N N 46 AGS H2 H N N 47 ALA N N N N 48 ALA CA C N S 49 ALA C C N N 50 ALA O O N N 51 ALA CB C N N 52 ALA OXT O N N 53 ALA H H N N 54 ALA H2 H N N 55 ALA HA H N N 56 ALA HB1 H N N 57 ALA HB2 H N N 58 ALA HB3 H N N 59 ALA HXT H N N 60 ARG N N N N 61 ARG CA C N S 62 ARG C C N N 63 ARG O O N N 64 ARG CB C N N 65 ARG CG C N N 66 ARG CD C N N 67 ARG NE N N N 68 ARG CZ C N N 69 ARG NH1 N N N 70 ARG NH2 N N N 71 ARG OXT O N N 72 ARG H H N N 73 ARG H2 H N N 74 ARG HA H N N 75 ARG HB2 H N N 76 ARG HB3 H N N 77 ARG HG2 H N N 78 ARG HG3 H N N 79 ARG HD2 H N N 80 ARG HD3 H N N 81 ARG HE H N N 82 ARG HH11 H N N 83 ARG HH12 H N N 84 ARG HH21 H N N 85 ARG HH22 H N N 86 ARG HXT H N N 87 ASN N N N N 88 ASN CA C N S 89 ASN C C N N 90 ASN O O N N 91 ASN CB C N N 92 ASN CG C N N 93 ASN OD1 O N N 94 ASN ND2 N N N 95 ASN OXT O N N 96 ASN H H N N 97 ASN H2 H N N 98 ASN HA H N N 99 ASN HB2 H N N 100 ASN HB3 H N N 101 ASN HD21 H N N 102 ASN HD22 H N N 103 ASN HXT H N N 104 ASP N N N N 105 ASP CA C N S 106 ASP C C N N 107 ASP O O N N 108 ASP CB C N N 109 ASP CG C N N 110 ASP OD1 O N N 111 ASP OD2 O N N 112 ASP OXT O N N 113 ASP H H N N 114 ASP H2 H N N 115 ASP HA H N N 116 ASP HB2 H N N 117 ASP HB3 H N N 118 ASP HD2 H N N 119 ASP HXT H N N 120 CYS N N N N 121 CYS CA C N R 122 CYS C C N N 123 CYS O O N N 124 CYS CB C N N 125 CYS SG S N N 126 CYS OXT O N N 127 CYS H H N N 128 CYS H2 H N N 129 CYS HA H N N 130 CYS HB2 H N N 131 CYS HB3 H N N 132 CYS HG H N N 133 CYS HXT H N N 134 DT OP3 O N N 135 DT P P N N 136 DT OP1 O N N 137 DT OP2 O N N 138 DT "O5'" O N N 139 DT "C5'" C N N 140 DT "C4'" C N R 141 DT "O4'" O N N 142 DT "C3'" C N S 143 DT "O3'" O N N 144 DT "C2'" C N N 145 DT "C1'" C N R 146 DT N1 N N N 147 DT C2 C N N 148 DT O2 O N N 149 DT N3 N N N 150 DT C4 C N N 151 DT O4 O N N 152 DT C5 C N N 153 DT C7 C N N 154 DT C6 C N N 155 DT HOP3 H N N 156 DT HOP2 H N N 157 DT "H5'" H N N 158 DT "H5''" H N N 159 DT "H4'" H N N 160 DT "H3'" H N N 161 DT "HO3'" H N N 162 DT "H2'" H N N 163 DT "H2''" H N N 164 DT "H1'" H N N 165 DT H3 H N N 166 DT H71 H N N 167 DT H72 H N N 168 DT H73 H N N 169 DT H6 H N N 170 GLN N N N N 171 GLN CA C N S 172 GLN C C N N 173 GLN O O N N 174 GLN CB C N N 175 GLN CG C N N 176 GLN CD C N N 177 GLN OE1 O N N 178 GLN NE2 N N N 179 GLN OXT O N N 180 GLN H H N N 181 GLN H2 H N N 182 GLN HA H N N 183 GLN HB2 H N N 184 GLN HB3 H N N 185 GLN HG2 H N N 186 GLN HG3 H N N 187 GLN HE21 H N N 188 GLN HE22 H N N 189 GLN HXT H N N 190 GLU N N N N 191 GLU CA C N S 192 GLU C C N N 193 GLU O O N N 194 GLU CB C N N 195 GLU CG C N N 196 GLU CD C N N 197 GLU OE1 O N N 198 GLU OE2 O N N 199 GLU OXT O N N 200 GLU H H N N 201 GLU H2 H N N 202 GLU HA H N N 203 GLU HB2 H N N 204 GLU HB3 H N N 205 GLU HG2 H N N 206 GLU HG3 H N N 207 GLU HE2 H N N 208 GLU HXT H N N 209 GLY N N N N 210 GLY CA C N N 211 GLY C C N N 212 GLY O O N N 213 GLY OXT O N N 214 GLY H H N N 215 GLY H2 H N N 216 GLY HA2 H N N 217 GLY HA3 H N N 218 GLY HXT H N N 219 HIS N N N N 220 HIS CA C N S 221 HIS C C N N 222 HIS O O N N 223 HIS CB C N N 224 HIS CG C Y N 225 HIS ND1 N Y N 226 HIS CD2 C Y N 227 HIS CE1 C Y N 228 HIS NE2 N Y N 229 HIS OXT O N N 230 HIS H H N N 231 HIS H2 H N N 232 HIS HA H N N 233 HIS HB2 H N N 234 HIS HB3 H N N 235 HIS HD1 H N N 236 HIS HD2 H N N 237 HIS HE1 H N N 238 HIS HE2 H N N 239 HIS HXT H N N 240 ILE N N N N 241 ILE CA C N S 242 ILE C C N N 243 ILE O O N N 244 ILE CB C N S 245 ILE CG1 C N N 246 ILE CG2 C N N 247 ILE CD1 C N N 248 ILE OXT O N N 249 ILE H H N N 250 ILE H2 H N N 251 ILE HA H N N 252 ILE HB H N N 253 ILE HG12 H N N 254 ILE HG13 H N N 255 ILE HG21 H N N 256 ILE HG22 H N N 257 ILE HG23 H N N 258 ILE HD11 H N N 259 ILE HD12 H N N 260 ILE HD13 H N N 261 ILE HXT H N N 262 LEU N N N N 263 LEU CA C N S 264 LEU C C N N 265 LEU O O N N 266 LEU CB C N N 267 LEU CG C N N 268 LEU CD1 C N N 269 LEU CD2 C N N 270 LEU OXT O N N 271 LEU H H N N 272 LEU H2 H N N 273 LEU HA H N N 274 LEU HB2 H N N 275 LEU HB3 H N N 276 LEU HG H N N 277 LEU HD11 H N N 278 LEU HD12 H N N 279 LEU HD13 H N N 280 LEU HD21 H N N 281 LEU HD22 H N N 282 LEU HD23 H N N 283 LEU HXT H N N 284 LYS N N N N 285 LYS CA C N S 286 LYS C C N N 287 LYS O O N N 288 LYS CB C N N 289 LYS CG C N N 290 LYS CD C N N 291 LYS CE C N N 292 LYS NZ N N N 293 LYS OXT O N N 294 LYS H H N N 295 LYS H2 H N N 296 LYS HA H N N 297 LYS HB2 H N N 298 LYS HB3 H N N 299 LYS HG2 H N N 300 LYS HG3 H N N 301 LYS HD2 H N N 302 LYS HD3 H N N 303 LYS HE2 H N N 304 LYS HE3 H N N 305 LYS HZ1 H N N 306 LYS HZ2 H N N 307 LYS HZ3 H N N 308 LYS HXT H N N 309 MET N N N N 310 MET CA C N S 311 MET C C N N 312 MET O O N N 313 MET CB C N N 314 MET CG C N N 315 MET SD S N N 316 MET CE C N N 317 MET OXT O N N 318 MET H H N N 319 MET H2 H N N 320 MET HA H N N 321 MET HB2 H N N 322 MET HB3 H N N 323 MET HG2 H N N 324 MET HG3 H N N 325 MET HE1 H N N 326 MET HE2 H N N 327 MET HE3 H N N 328 MET HXT H N N 329 MG MG MG N N 330 PHE N N N N 331 PHE CA C N S 332 PHE C C N N 333 PHE O O N N 334 PHE CB C N N 335 PHE CG C Y N 336 PHE CD1 C Y N 337 PHE CD2 C Y N 338 PHE CE1 C Y N 339 PHE CE2 C Y N 340 PHE CZ C Y N 341 PHE OXT O N N 342 PHE H H N N 343 PHE H2 H N N 344 PHE HA H N N 345 PHE HB2 H N N 346 PHE HB3 H N N 347 PHE HD1 H N N 348 PHE HD2 H N N 349 PHE HE1 H N N 350 PHE HE2 H N N 351 PHE HZ H N N 352 PHE HXT H N N 353 PRO N N N N 354 PRO CA C N S 355 PRO C C N N 356 PRO O O N N 357 PRO CB C N N 358 PRO CG C N N 359 PRO CD C N N 360 PRO OXT O N N 361 PRO H H N N 362 PRO HA H N N 363 PRO HB2 H N N 364 PRO HB3 H N N 365 PRO HG2 H N N 366 PRO HG3 H N N 367 PRO HD2 H N N 368 PRO HD3 H N N 369 PRO HXT H N N 370 SER N N N N 371 SER CA C N S 372 SER C C N N 373 SER O O N N 374 SER CB C N N 375 SER OG O N N 376 SER OXT O N N 377 SER H H N N 378 SER H2 H N N 379 SER HA H N N 380 SER HB2 H N N 381 SER HB3 H N N 382 SER HG H N N 383 SER HXT H N N 384 THR N N N N 385 THR CA C N S 386 THR C C N N 387 THR O O N N 388 THR CB C N R 389 THR OG1 O N N 390 THR CG2 C N N 391 THR OXT O N N 392 THR H H N N 393 THR H2 H N N 394 THR HA H N N 395 THR HB H N N 396 THR HG1 H N N 397 THR HG21 H N N 398 THR HG22 H N N 399 THR HG23 H N N 400 THR HXT H N N 401 TRP N N N N 402 TRP CA C N S 403 TRP C C N N 404 TRP O O N N 405 TRP CB C N N 406 TRP CG C Y N 407 TRP CD1 C Y N 408 TRP CD2 C Y N 409 TRP NE1 N Y N 410 TRP CE2 C Y N 411 TRP CE3 C Y N 412 TRP CZ2 C Y N 413 TRP CZ3 C Y N 414 TRP CH2 C Y N 415 TRP OXT O N N 416 TRP H H N N 417 TRP H2 H N N 418 TRP HA H N N 419 TRP HB2 H N N 420 TRP HB3 H N N 421 TRP HD1 H N N 422 TRP HE1 H N N 423 TRP HE3 H N N 424 TRP HZ2 H N N 425 TRP HZ3 H N N 426 TRP HH2 H N N 427 TRP HXT H N N 428 TYR N N N N 429 TYR CA C N S 430 TYR C C N N 431 TYR O O N N 432 TYR CB C N N 433 TYR CG C Y N 434 TYR CD1 C Y N 435 TYR CD2 C Y N 436 TYR CE1 C Y N 437 TYR CE2 C Y N 438 TYR CZ C Y N 439 TYR OH O N N 440 TYR OXT O N N 441 TYR H H N N 442 TYR H2 H N N 443 TYR HA H N N 444 TYR HB2 H N N 445 TYR HB3 H N N 446 TYR HD1 H N N 447 TYR HD2 H N N 448 TYR HE1 H N N 449 TYR HE2 H N N 450 TYR HH H N N 451 TYR HXT H N N 452 VAL N N N N 453 VAL CA C N S 454 VAL C C N N 455 VAL O O N N 456 VAL CB C N N 457 VAL CG1 C N N 458 VAL CG2 C N N 459 VAL OXT O N N 460 VAL H H N N 461 VAL H2 H N N 462 VAL HA H N N 463 VAL HB H N N 464 VAL HG11 H N N 465 VAL HG12 H N N 466 VAL HG13 H N N 467 VAL HG21 H N N 468 VAL HG22 H N N 469 VAL HG23 H N N 470 VAL HXT H N N 471 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal AGS PG S1G doub N N 1 AGS PG O2G sing N N 2 AGS PG O3G sing N N 3 AGS PG O3B sing N N 4 AGS PB O1B doub N N 5 AGS PB O2B sing N N 6 AGS PB O3B sing N N 7 AGS PB O3A sing N N 8 AGS PA O1A doub N N 9 AGS PA O2A sing N N 10 AGS PA O3A sing N N 11 AGS PA "O5'" sing N N 12 AGS "O5'" "C5'" sing N N 13 AGS "C5'" "C4'" sing N N 14 AGS "C4'" "O4'" sing N N 15 AGS "C4'" "C3'" sing N N 16 AGS "O4'" "C1'" sing N N 17 AGS "C3'" "O3'" sing N N 18 AGS "C3'" "C2'" sing N N 19 AGS "C2'" "O2'" sing N N 20 AGS "C2'" "C1'" sing N N 21 AGS "C1'" N9 sing N N 22 AGS N9 C8 sing Y N 23 AGS N9 C4 sing Y N 24 AGS C8 N7 doub Y N 25 AGS N7 C5 sing Y N 26 AGS C5 C6 sing Y N 27 AGS C5 C4 doub Y N 28 AGS C6 N6 sing N N 29 AGS C6 N1 doub Y N 30 AGS N1 C2 sing Y N 31 AGS C2 N3 doub Y N 32 AGS N3 C4 sing Y N 33 AGS O2G HOG2 sing N N 34 AGS O3G H21 sing N N 35 AGS O2B HOB2 sing N N 36 AGS O2A HOA2 sing N N 37 AGS "C5'" "H5'1" sing N N 38 AGS "C5'" "H5'2" sing N N 39 AGS "C4'" "H4'" sing N N 40 AGS "C3'" "H3'" sing N N 41 AGS "O3'" "HO3'" sing N N 42 AGS "C2'" "H2'" sing N N 43 AGS "O2'" "HO2'" sing N N 44 AGS "C1'" "H1'" sing N N 45 AGS C8 H8 sing N N 46 AGS N6 HN61 sing N N 47 AGS N6 HN62 sing N N 48 AGS C2 H2 sing N N 49 ALA N CA sing N N 50 ALA N H sing N N 51 ALA N H2 sing N N 52 ALA CA C sing N N 53 ALA CA CB sing N N 54 ALA CA HA sing N N 55 ALA C O doub N N 56 ALA C OXT sing N N 57 ALA CB HB1 sing N N 58 ALA CB HB2 sing N N 59 ALA CB HB3 sing N N 60 ALA OXT HXT sing N N 61 ARG N CA sing N N 62 ARG N H sing N N 63 ARG N H2 sing N N 64 ARG CA C sing N N 65 ARG CA CB sing N N 66 ARG CA HA sing N N 67 ARG C O doub N N 68 ARG C OXT sing N N 69 ARG CB CG sing N N 70 ARG CB HB2 sing N N 71 ARG CB HB3 sing N N 72 ARG CG CD sing N N 73 ARG CG HG2 sing N N 74 ARG CG HG3 sing N N 75 ARG CD NE sing N N 76 ARG CD HD2 sing N N 77 ARG CD HD3 sing N N 78 ARG NE CZ sing N N 79 ARG NE HE sing N N 80 ARG CZ NH1 sing N N 81 ARG CZ NH2 doub N N 82 ARG NH1 HH11 sing N N 83 ARG NH1 HH12 sing N N 84 ARG NH2 HH21 sing N N 85 ARG NH2 HH22 sing N N 86 ARG OXT HXT sing N N 87 ASN N CA sing N N 88 ASN N H sing N N 89 ASN N H2 sing N N 90 ASN CA C sing N N 91 ASN CA CB sing N N 92 ASN CA HA sing N N 93 ASN C O doub N N 94 ASN C OXT sing N N 95 ASN CB CG sing N N 96 ASN CB HB2 sing N N 97 ASN CB HB3 sing N N 98 ASN CG OD1 doub N N 99 ASN CG ND2 sing N N 100 ASN ND2 HD21 sing N N 101 ASN ND2 HD22 sing N N 102 ASN OXT HXT sing N N 103 ASP N CA sing N N 104 ASP N H sing N N 105 ASP N H2 sing N N 106 ASP CA C sing N N 107 ASP CA CB sing N N 108 ASP CA HA sing N N 109 ASP C O doub N N 110 ASP C OXT sing N N 111 ASP CB CG sing N N 112 ASP CB HB2 sing N N 113 ASP CB HB3 sing N N 114 ASP CG OD1 doub N N 115 ASP CG OD2 sing N N 116 ASP OD2 HD2 sing N N 117 ASP OXT HXT sing N N 118 CYS N CA sing N N 119 CYS N H sing N N 120 CYS N H2 sing N N 121 CYS CA C sing N N 122 CYS CA CB sing N N 123 CYS CA HA sing N N 124 CYS C O doub N N 125 CYS C OXT sing N N 126 CYS CB SG sing N N 127 CYS CB HB2 sing N N 128 CYS CB HB3 sing N N 129 CYS SG HG sing N N 130 CYS OXT HXT sing N N 131 DT OP3 P sing N N 132 DT OP3 HOP3 sing N N 133 DT P OP1 doub N N 134 DT P OP2 sing N N 135 DT P "O5'" sing N N 136 DT OP2 HOP2 sing N N 137 DT "O5'" "C5'" sing N N 138 DT "C5'" "C4'" sing N N 139 DT "C5'" "H5'" sing N N 140 DT "C5'" "H5''" sing N N 141 DT "C4'" "O4'" sing N N 142 DT "C4'" "C3'" sing N N 143 DT "C4'" "H4'" sing N N 144 DT "O4'" "C1'" sing N N 145 DT "C3'" "O3'" sing N N 146 DT "C3'" "C2'" sing N N 147 DT "C3'" "H3'" sing N N 148 DT "O3'" "HO3'" sing N N 149 DT "C2'" "C1'" sing N N 150 DT "C2'" "H2'" sing N N 151 DT "C2'" "H2''" sing N N 152 DT "C1'" N1 sing N N 153 DT "C1'" "H1'" sing N N 154 DT N1 C2 sing N N 155 DT N1 C6 sing N N 156 DT C2 O2 doub N N 157 DT C2 N3 sing N N 158 DT N3 C4 sing N N 159 DT N3 H3 sing N N 160 DT C4 O4 doub N N 161 DT C4 C5 sing N N 162 DT C5 C7 sing N N 163 DT C5 C6 doub N N 164 DT C7 H71 sing N N 165 DT C7 H72 sing N N 166 DT C7 H73 sing N N 167 DT C6 H6 sing N N 168 GLN N CA sing N N 169 GLN N H sing N N 170 GLN N H2 sing N N 171 GLN CA C sing N N 172 GLN CA CB sing N N 173 GLN CA HA sing N N 174 GLN C O doub N N 175 GLN C OXT sing N N 176 GLN CB CG sing N N 177 GLN CB HB2 sing N N 178 GLN CB HB3 sing N N 179 GLN CG CD sing N N 180 GLN CG HG2 sing N N 181 GLN CG HG3 sing N N 182 GLN CD OE1 doub N N 183 GLN CD NE2 sing N N 184 GLN NE2 HE21 sing N N 185 GLN NE2 HE22 sing N N 186 GLN OXT HXT sing N N 187 GLU N CA sing N N 188 GLU N H sing N N 189 GLU N H2 sing N N 190 GLU CA C sing N N 191 GLU CA CB sing N N 192 GLU CA HA sing N N 193 GLU C O doub N N 194 GLU C OXT sing N N 195 GLU CB CG sing N N 196 GLU CB HB2 sing N N 197 GLU CB HB3 sing N N 198 GLU CG CD sing N N 199 GLU CG HG2 sing N N 200 GLU CG HG3 sing N N 201 GLU CD OE1 doub N N 202 GLU CD OE2 sing N N 203 GLU OE2 HE2 sing N N 204 GLU OXT HXT sing N N 205 GLY N CA sing N N 206 GLY N H sing N N 207 GLY N H2 sing N N 208 GLY CA C sing N N 209 GLY CA HA2 sing N N 210 GLY CA HA3 sing N N 211 GLY C O doub N N 212 GLY C OXT sing N N 213 GLY OXT HXT sing N N 214 HIS N CA sing N N 215 HIS N H sing N N 216 HIS N H2 sing N N 217 HIS CA C sing N N 218 HIS CA CB sing N N 219 HIS CA HA sing N N 220 HIS C O doub N N 221 HIS C OXT sing N N 222 HIS CB CG sing N N 223 HIS CB HB2 sing N N 224 HIS CB HB3 sing N N 225 HIS CG ND1 sing Y N 226 HIS CG CD2 doub Y N 227 HIS ND1 CE1 doub Y N 228 HIS ND1 HD1 sing N N 229 HIS CD2 NE2 sing Y N 230 HIS CD2 HD2 sing N N 231 HIS CE1 NE2 sing Y N 232 HIS CE1 HE1 sing N N 233 HIS NE2 HE2 sing N N 234 HIS OXT HXT sing N N 235 ILE N CA sing N N 236 ILE N H sing N N 237 ILE N H2 sing N N 238 ILE CA C sing N N 239 ILE CA CB sing N N 240 ILE CA HA sing N N 241 ILE C O doub N N 242 ILE C OXT sing N N 243 ILE CB CG1 sing N N 244 ILE CB CG2 sing N N 245 ILE CB HB sing N N 246 ILE CG1 CD1 sing N N 247 ILE CG1 HG12 sing N N 248 ILE CG1 HG13 sing N N 249 ILE CG2 HG21 sing N N 250 ILE CG2 HG22 sing N N 251 ILE CG2 HG23 sing N N 252 ILE CD1 HD11 sing N N 253 ILE CD1 HD12 sing N N 254 ILE CD1 HD13 sing N N 255 ILE OXT HXT sing N N 256 LEU N CA sing N N 257 LEU N H sing N N 258 LEU N H2 sing N N 259 LEU CA C sing N N 260 LEU CA CB sing N N 261 LEU CA HA sing N N 262 LEU C O doub N N 263 LEU C OXT sing N N 264 LEU CB CG sing N N 265 LEU CB HB2 sing N N 266 LEU CB HB3 sing N N 267 LEU CG CD1 sing N N 268 LEU CG CD2 sing N N 269 LEU CG HG sing N N 270 LEU CD1 HD11 sing N N 271 LEU CD1 HD12 sing N N 272 LEU CD1 HD13 sing N N 273 LEU CD2 HD21 sing N N 274 LEU CD2 HD22 sing N N 275 LEU CD2 HD23 sing N N 276 LEU OXT HXT sing N N 277 LYS N CA sing N N 278 LYS N H sing N N 279 LYS N H2 sing N N 280 LYS CA C sing N N 281 LYS CA CB sing N N 282 LYS CA HA sing N N 283 LYS C O doub N N 284 LYS C OXT sing N N 285 LYS CB CG sing N N 286 LYS CB HB2 sing N N 287 LYS CB HB3 sing N N 288 LYS CG CD sing N N 289 LYS CG HG2 sing N N 290 LYS CG HG3 sing N N 291 LYS CD CE sing N N 292 LYS CD HD2 sing N N 293 LYS CD HD3 sing N N 294 LYS CE NZ sing N N 295 LYS CE HE2 sing N N 296 LYS CE HE3 sing N N 297 LYS NZ HZ1 sing N N 298 LYS NZ HZ2 sing N N 299 LYS NZ HZ3 sing N N 300 LYS OXT HXT sing N N 301 MET N CA sing N N 302 MET N H sing N N 303 MET N H2 sing N N 304 MET CA C sing N N 305 MET CA CB sing N N 306 MET CA HA sing N N 307 MET C O doub N N 308 MET C OXT sing N N 309 MET CB CG sing N N 310 MET CB HB2 sing N N 311 MET CB HB3 sing N N 312 MET CG SD sing N N 313 MET CG HG2 sing N N 314 MET CG HG3 sing N N 315 MET SD CE sing N N 316 MET CE HE1 sing N N 317 MET CE HE2 sing N N 318 MET CE HE3 sing N N 319 MET OXT HXT sing N N 320 PHE N CA sing N N 321 PHE N H sing N N 322 PHE N H2 sing N N 323 PHE CA C sing N N 324 PHE CA CB sing N N 325 PHE CA HA sing N N 326 PHE C O doub N N 327 PHE C OXT sing N N 328 PHE CB CG sing N N 329 PHE CB HB2 sing N N 330 PHE CB HB3 sing N N 331 PHE CG CD1 doub Y N 332 PHE CG CD2 sing Y N 333 PHE CD1 CE1 sing Y N 334 PHE CD1 HD1 sing N N 335 PHE CD2 CE2 doub Y N 336 PHE CD2 HD2 sing N N 337 PHE CE1 CZ doub Y N 338 PHE CE1 HE1 sing N N 339 PHE CE2 CZ sing Y N 340 PHE CE2 HE2 sing N N 341 PHE CZ HZ sing N N 342 PHE OXT HXT sing N N 343 PRO N CA sing N N 344 PRO N CD sing N N 345 PRO N H sing N N 346 PRO CA C sing N N 347 PRO CA CB sing N N 348 PRO CA HA sing N N 349 PRO C O doub N N 350 PRO C OXT sing N N 351 PRO CB CG sing N N 352 PRO CB HB2 sing N N 353 PRO CB HB3 sing N N 354 PRO CG CD sing N N 355 PRO CG HG2 sing N N 356 PRO CG HG3 sing N N 357 PRO CD HD2 sing N N 358 PRO CD HD3 sing N N 359 PRO OXT HXT sing N N 360 SER N CA sing N N 361 SER N H sing N N 362 SER N H2 sing N N 363 SER CA C sing N N 364 SER CA CB sing N N 365 SER CA HA sing N N 366 SER C O doub N N 367 SER C OXT sing N N 368 SER CB OG sing N N 369 SER CB HB2 sing N N 370 SER CB HB3 sing N N 371 SER OG HG sing N N 372 SER OXT HXT sing N N 373 THR N CA sing N N 374 THR N H sing N N 375 THR N H2 sing N N 376 THR CA C sing N N 377 THR CA CB sing N N 378 THR CA HA sing N N 379 THR C O doub N N 380 THR C OXT sing N N 381 THR CB OG1 sing N N 382 THR CB CG2 sing N N 383 THR CB HB sing N N 384 THR OG1 HG1 sing N N 385 THR CG2 HG21 sing N N 386 THR CG2 HG22 sing N N 387 THR CG2 HG23 sing N N 388 THR OXT HXT sing N N 389 TRP N CA sing N N 390 TRP N H sing N N 391 TRP N H2 sing N N 392 TRP CA C sing N N 393 TRP CA CB sing N N 394 TRP CA HA sing N N 395 TRP C O doub N N 396 TRP C OXT sing N N 397 TRP CB CG sing N N 398 TRP CB HB2 sing N N 399 TRP CB HB3 sing N N 400 TRP CG CD1 doub Y N 401 TRP CG CD2 sing Y N 402 TRP CD1 NE1 sing Y N 403 TRP CD1 HD1 sing N N 404 TRP CD2 CE2 doub Y N 405 TRP CD2 CE3 sing Y N 406 TRP NE1 CE2 sing Y N 407 TRP NE1 HE1 sing N N 408 TRP CE2 CZ2 sing Y N 409 TRP CE3 CZ3 doub Y N 410 TRP CE3 HE3 sing N N 411 TRP CZ2 CH2 doub Y N 412 TRP CZ2 HZ2 sing N N 413 TRP CZ3 CH2 sing Y N 414 TRP CZ3 HZ3 sing N N 415 TRP CH2 HH2 sing N N 416 TRP OXT HXT sing N N 417 TYR N CA sing N N 418 TYR N H sing N N 419 TYR N H2 sing N N 420 TYR CA C sing N N 421 TYR CA CB sing N N 422 TYR CA HA sing N N 423 TYR C O doub N N 424 TYR C OXT sing N N 425 TYR CB CG sing N N 426 TYR CB HB2 sing N N 427 TYR CB HB3 sing N N 428 TYR CG CD1 doub Y N 429 TYR CG CD2 sing Y N 430 TYR CD1 CE1 sing Y N 431 TYR CD1 HD1 sing N N 432 TYR CD2 CE2 doub Y N 433 TYR CD2 HD2 sing N N 434 TYR CE1 CZ doub Y N 435 TYR CE1 HE1 sing N N 436 TYR CE2 CZ sing Y N 437 TYR CE2 HE2 sing N N 438 TYR CZ OH sing N N 439 TYR OH HH sing N N 440 TYR OXT HXT sing N N 441 VAL N CA sing N N 442 VAL N H sing N N 443 VAL N H2 sing N N 444 VAL CA C sing N N 445 VAL CA CB sing N N 446 VAL CA HA sing N N 447 VAL C O doub N N 448 VAL C OXT sing N N 449 VAL CB CG1 sing N N 450 VAL CB CG2 sing N N 451 VAL CB HB sing N N 452 VAL CG1 HG11 sing N N 453 VAL CG1 HG12 sing N N 454 VAL CG1 HG13 sing N N 455 VAL CG2 HG21 sing N N 456 VAL CG2 HG22 sing N N 457 VAL CG2 HG23 sing N N 458 VAL OXT HXT sing N N 459 # _em_admin.current_status REL _em_admin.deposition_date 2024-02-28 _em_admin.deposition_site PDBE _em_admin.entry_id 8S70 _em_admin.last_update 2025-07-09 _em_admin.map_release_date 2025-01-15 _em_admin.title 'Cryo-EM structure of Pseudomonas aeruginosa recombinase A (RecA) in complex with ssDNA 72mer and ATPgS' # loop_ _em_buffer_component.buffer_id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.id _em_buffer_component.name 1 20 mM Tris 1 'tris(hydroxymethyl)aminomethane' 1 150 mM NaCl 2 'sodium chloride' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # loop_ _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue _em_entity_assembly_naturalsource.details ? ? 2 2 208964 'Pseudomonas aeruginosa PAO1' ? ? ? ? ? ? ? 3 3 32630 'synthetic construct' ? ? ? ? ? # loop_ _em_entity_assembly_recombinant.cell _em_entity_assembly_recombinant.entity_assembly_id _em_entity_assembly_recombinant.id _em_entity_assembly_recombinant.ncbi_tax_id _em_entity_assembly_recombinant.organism _em_entity_assembly_recombinant.plasmid _em_entity_assembly_recombinant.strain ? 2 2 469008 'Escherichia coli BL21(DE3)' ? ? ? 3 3 32630 'synthetic construct' ? ? # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.details ? _em_helical_entity.axial_symmetry C1 _em_helical_entity.angular_rotation_per_subunit 59.2 _em_helical_entity.axial_rise_per_subunit 15.4 # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 49 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K2 SUMMIT (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 427064 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? ? ? OTHER ? 8 ? ? ? ? ? 'MODEL REFINEMENT' ? 9 ? 1 ? PHENIX ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? cryoSPARC 4.2.1 # _em_specimen.concentration 2.3 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Italian Ministry of Education' _pdbx_audit_support.country Italy _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name SwissModel _pdbx_initial_refinement_model.accession_code ? # _atom_sites.entry_id 8S70 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C MG N O P S # loop_ #