HEADER FLAVOPROTEIN 07-MAR-24 8S8V TITLE OPR3 VARIANT R283D IN ITS MONOMERIC FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: 12-OXOPHYTODIENOATE REDUCTASE 3; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SOLANUM LYCOPERSICUM; SOURCE 3 ORGANISM_COMMON: TOMATO; SOURCE 4 ORGANISM_TAXID: 4081; SOURCE 5 GENE: OPR3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ENE-REDUCTASE, OLD YELLOW ENZYME, FLAVOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.BIJELIC,P.MACHEROUX,B.KERSCHBAUMER REVDAT 2 21-AUG-24 8S8V 1 JRNL REVDAT 1 14-AUG-24 8S8V 0 JRNL AUTH B.KERSCHBAUMER,P.MACHEROUX,A.BIJELIC JRNL TITL ANALYSIS OF HOMODIMER FORMATION IN 12-OXOPHYTODIENOATE JRNL TITL 2 REDUCTASE 3 IN SOLUTIO AND CRYSTALLO CHALLENGES THE JRNL TITL 3 PHYSIOLOGICAL ROLE OF THE DIMER. JRNL REF SCI REP V. 14 18093 2024 JRNL REFN ESSN 2045-2322 JRNL PMID 39103552 JRNL DOI 10.1038/S41598-024-69160-6 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.21_5207: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.66 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 3 NUMBER OF REFLECTIONS : 14404 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.255 REMARK 3 R VALUE (WORKING SET) : 0.250 REMARK 3 FREE R VALUE : 0.297 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.030 REMARK 3 FREE R VALUE TEST SET COUNT : 1445 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.6600 - 6.4600 0.91 1346 154 0.2391 0.2762 REMARK 3 2 6.4600 - 5.1300 0.92 1301 140 0.2553 0.3301 REMARK 3 3 5.1300 - 4.4800 0.94 1309 143 0.2282 0.2549 REMARK 3 4 4.4800 - 4.0700 0.94 1298 148 0.2297 0.2750 REMARK 3 5 4.0700 - 3.7800 0.95 1304 149 0.2324 0.2666 REMARK 3 6 3.7800 - 3.5600 0.95 1283 142 0.2490 0.3449 REMARK 3 7 3.5600 - 3.3800 0.96 1307 149 0.2561 0.3213 REMARK 3 8 3.3800 - 3.2300 0.96 1301 150 0.2803 0.3010 REMARK 3 9 3.2300 - 3.1100 0.94 1284 134 0.2881 0.3316 REMARK 3 10 3.1100 - 3.0000 0.91 1226 136 0.2997 0.3386 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.450 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.490 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 5647 REMARK 3 ANGLE : 1.034 7706 REMARK 3 CHIRALITY : 0.061 858 REMARK 3 PLANARITY : 0.012 999 REMARK 3 DIHEDRAL : 14.385 1996 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 10 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.3783 17.7399 14.7122 REMARK 3 T TENSOR REMARK 3 T11: 0.3200 T22: 0.2831 REMARK 3 T33: 0.3279 T12: 0.0046 REMARK 3 T13: 0.0182 T23: 0.0290 REMARK 3 L TENSOR REMARK 3 L11: 0.1651 L22: 0.4887 REMARK 3 L33: 0.4243 L12: -0.0831 REMARK 3 L13: -0.0206 L23: -0.3647 REMARK 3 S TENSOR REMARK 3 S11: 0.0357 S12: -0.2546 S13: -0.1112 REMARK 3 S21: 0.2372 S22: -0.0706 S23: 0.0052 REMARK 3 S31: 0.0780 S32: 0.0206 S33: 0.0913 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 123 THROUGH 270 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.7379 28.6074 28.0175 REMARK 3 T TENSOR REMARK 3 T11: 0.3226 T22: 0.2190 REMARK 3 T33: 0.3205 T12: -0.0448 REMARK 3 T13: 0.0739 T23: -0.0391 REMARK 3 L TENSOR REMARK 3 L11: 0.9753 L22: 1.0287 REMARK 3 L33: 0.7922 L12: -0.5079 REMARK 3 L13: 0.8595 L23: -0.6151 REMARK 3 S TENSOR REMARK 3 S11: -0.0269 S12: 0.0797 S13: 0.1355 REMARK 3 S21: 0.1522 S22: -0.0255 S23: 0.0458 REMARK 3 S31: -0.1003 S32: 0.0767 S33: -0.0981 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 271 THROUGH 384 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.5395 26.5865 12.9854 REMARK 3 T TENSOR REMARK 3 T11: 0.2741 T22: 0.3955 REMARK 3 T33: 0.3240 T12: -0.0339 REMARK 3 T13: -0.0293 T23: 0.0969 REMARK 3 L TENSOR REMARK 3 L11: 0.4441 L22: 0.9126 REMARK 3 L33: 0.6898 L12: -0.2206 REMARK 3 L13: -0.3337 L23: 0.1630 REMARK 3 S TENSOR REMARK 3 S11: 0.0535 S12: 0.1254 S13: -0.2403 REMARK 3 S21: 0.0822 S22: -0.2785 S23: 0.0935 REMARK 3 S31: 0.0271 S32: 0.1389 S33: -0.0897 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 10 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.4599 28.6456 33.8855 REMARK 3 T TENSOR REMARK 3 T11: 0.3232 T22: 0.1975 REMARK 3 T33: 0.3521 T12: -0.0674 REMARK 3 T13: 0.0441 T23: 0.0595 REMARK 3 L TENSOR REMARK 3 L11: 0.0938 L22: 0.0767 REMARK 3 L33: 1.2410 L12: -0.0876 REMARK 3 L13: 0.2984 L23: -0.2239 REMARK 3 S TENSOR REMARK 3 S11: -0.0253 S12: 0.0829 S13: 0.1300 REMARK 3 S21: -0.1134 S22: -0.0107 S23: 0.1945 REMARK 3 S31: 0.2101 S32: 0.2270 S33: 0.1324 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 123 THROUGH 176 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.8142 27.2012 16.4951 REMARK 3 T TENSOR REMARK 3 T11: 0.2476 T22: 0.1701 REMARK 3 T33: 0.3174 T12: -0.0421 REMARK 3 T13: 0.0398 T23: -0.0263 REMARK 3 L TENSOR REMARK 3 L11: 1.1012 L22: 1.1677 REMARK 3 L33: 1.9008 L12: -0.3325 REMARK 3 L13: 0.6941 L23: 0.0317 REMARK 3 S TENSOR REMARK 3 S11: 0.1762 S12: 0.1390 S13: 0.0845 REMARK 3 S21: -0.1623 S22: -0.1768 S23: -0.3789 REMARK 3 S31: -0.1920 S32: 0.4008 S33: -0.1673 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 177 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.9774 15.7260 20.5914 REMARK 3 T TENSOR REMARK 3 T11: 0.3764 T22: 0.2730 REMARK 3 T33: 0.2988 T12: 0.0676 REMARK 3 T13: -0.0420 T23: -0.0045 REMARK 3 L TENSOR REMARK 3 L11: 0.5112 L22: 2.1182 REMARK 3 L33: 0.2457 L12: 0.3634 REMARK 3 L13: -0.1150 L23: 0.2181 REMARK 3 S TENSOR REMARK 3 S11: 0.0601 S12: 0.0536 S13: -0.4428 REMARK 3 S21: -0.6076 S22: 0.1508 S23: -0.1961 REMARK 3 S31: -0.2573 S32: 0.1722 S33: 0.2353 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 230 THROUGH 311 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.1836 9.6560 26.1903 REMARK 3 T TENSOR REMARK 3 T11: 0.3580 T22: 0.1351 REMARK 3 T33: 0.3024 T12: -0.0505 REMARK 3 T13: -0.0190 T23: 0.0004 REMARK 3 L TENSOR REMARK 3 L11: 1.2854 L22: 0.8098 REMARK 3 L33: 2.0421 L12: -0.4297 REMARK 3 L13: 1.0458 L23: -0.0303 REMARK 3 S TENSOR REMARK 3 S11: 0.1495 S12: 0.2888 S13: 0.0724 REMARK 3 S21: 0.0255 S22: -0.0369 S23: -0.1154 REMARK 3 S31: 0.1379 S32: 0.2063 S33: 0.1138 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 312 THROUGH 384 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.4241 23.7216 36.3890 REMARK 3 T TENSOR REMARK 3 T11: 0.3741 T22: 0.2833 REMARK 3 T33: 0.2752 T12: -0.0728 REMARK 3 T13: -0.0450 T23: 0.0252 REMARK 3 L TENSOR REMARK 3 L11: 1.4403 L22: 1.1609 REMARK 3 L33: 0.8988 L12: -0.0361 REMARK 3 L13: -0.4059 L23: 0.1981 REMARK 3 S TENSOR REMARK 3 S11: 0.2057 S12: 0.2704 S13: 0.1376 REMARK 3 S21: -0.1178 S22: -0.3176 S23: 0.1711 REMARK 3 S31: 0.1625 S32: -0.3574 S33: -0.0658 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8S8V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-MAR-24. REMARK 100 THE DEPOSITION ID IS D_1292137119. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-FEB-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.87 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 133610 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.690 REMARK 200 RESOLUTION RANGE LOW (A) : 44.660 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.4 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 1.7100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.76 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES/TRIS (6.5), 10 MM AMMONIUM REMARK 280 SULFATE, 8-16% PEG8000, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 43.19500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.76400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.65700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.76400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.19500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.65700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 ALA A 5 REMARK 465 GLN A 6 REMARK 465 ASP A 7 REMARK 465 GLY A 8 REMARK 465 ASN A 9 REMARK 465 TYR A 284 REMARK 465 VAL A 285 REMARK 465 ALA A 286 REMARK 465 TYR A 287 REMARK 465 GLY A 288 REMARK 465 GLN A 289 REMARK 465 THR A 290 REMARK 465 GLU A 291 REMARK 465 ALA A 292 REMARK 465 GLY A 293 REMARK 465 ARG A 294 REMARK 465 LEU A 295 REMARK 465 GLY A 296 REMARK 465 SER A 297 REMARK 465 GLU A 298 REMARK 465 GLU A 299 REMARK 465 GLU A 300 REMARK 465 GLN A 385 REMARK 465 GLY A 386 REMARK 465 ASN A 387 REMARK 465 GLY A 388 REMARK 465 SER A 389 REMARK 465 ASN A 390 REMARK 465 GLY A 391 REMARK 465 PRO A 392 REMARK 465 LEU A 393 REMARK 465 SER A 394 REMARK 465 ARG A 395 REMARK 465 LEU A 396 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 SER B 3 REMARK 465 SER B 4 REMARK 465 ALA B 5 REMARK 465 GLN B 6 REMARK 465 ASP B 7 REMARK 465 GLY B 8 REMARK 465 ASN B 9 REMARK 465 ASP B 283 REMARK 465 TYR B 284 REMARK 465 VAL B 285 REMARK 465 ALA B 286 REMARK 465 TYR B 287 REMARK 465 GLY B 288 REMARK 465 GLN B 289 REMARK 465 THR B 290 REMARK 465 GLU B 291 REMARK 465 ALA B 292 REMARK 465 GLY B 293 REMARK 465 ARG B 294 REMARK 465 LEU B 295 REMARK 465 GLY B 296 REMARK 465 SER B 297 REMARK 465 GLU B 298 REMARK 465 GLU B 299 REMARK 465 GLN B 385 REMARK 465 GLY B 386 REMARK 465 ASN B 387 REMARK 465 GLY B 388 REMARK 465 SER B 389 REMARK 465 ASN B 390 REMARK 465 GLY B 391 REMARK 465 PRO B 392 REMARK 465 LEU B 393 REMARK 465 SER B 394 REMARK 465 ARG B 395 REMARK 465 LEU B 396 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 20 CG CD CE NZ REMARK 470 LYS A 83 CG CD CE NZ REMARK 470 GLU A 84 CG CD OE1 OE2 REMARK 470 ARG A 87 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 90 CG CD CE NZ REMARK 470 LYS A 131 CG CD CE NZ REMARK 470 LYS A 151 CG CD CE NZ REMARK 470 SER A 210 OG REMARK 470 GLN A 223 CG CD OE1 NE2 REMARK 470 ASP A 243 CG OD1 OD2 REMARK 470 MET A 248 CG SD CE REMARK 470 LYS A 265 CG CD CE NZ REMARK 470 LYS A 273 CG CD CE NZ REMARK 470 GLU A 301 CG CD OE1 OE2 REMARK 470 ARG A 303 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 20 CG CD CE NZ REMARK 470 LYS B 83 CG CD CE NZ REMARK 470 ARG B 87 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 90 CG CD CE NZ REMARK 470 LYS B 131 CG CD CE NZ REMARK 470 ARG B 136 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 162 CG CD OE1 NE2 REMARK 470 MET B 248 CG SD CE REMARK 470 LYS B 265 CG CD CE NZ REMARK 470 LYS B 273 CG CD CE NZ REMARK 470 GLU B 300 CG CD OE1 OE2 REMARK 470 GLU B 301 CG CD OE1 OE2 REMARK 470 ARG B 303 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 329 CG CD OE1 OE2 REMARK 470 GLN B 333 CG CD OE1 NE2 REMARK 470 ARG B 366 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 367 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 80 30.97 -141.41 REMARK 500 ILE A 200 -52.52 -123.21 REMARK 500 ASP A 205 -164.83 -103.87 REMARK 500 SER A 239 80.59 -153.23 REMARK 500 TYR A 276 167.75 175.96 REMARK 500 ALA A 302 -36.32 81.69 REMARK 500 ASP A 350 40.35 -97.91 REMARK 500 VAL A 375 -59.02 -123.15 REMARK 500 TYR A 378 -62.09 -125.53 REMARK 500 ILE B 200 -52.65 -123.32 REMARK 500 ASP B 205 -164.53 -103.01 REMARK 500 SER B 239 80.81 -154.48 REMARK 500 TYR B 276 168.17 176.21 REMARK 500 ASP B 350 39.74 -97.77 REMARK 500 VAL B 375 -59.06 -122.00 REMARK 500 TYR B 378 -62.43 -125.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 53 0.12 SIDE CHAIN REMARK 500 ARG A 214 0.13 SIDE CHAIN REMARK 500 ARG B 237 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 8S8V A 1 396 UNP Q9FEW9 OPR3_SOLLC 1 396 DBREF 8S8V B 1 396 UNP Q9FEW9 OPR3_SOLLC 1 396 SEQADV 8S8V HIS A -5 UNP Q9FEW9 EXPRESSION TAG SEQADV 8S8V HIS A -4 UNP Q9FEW9 EXPRESSION TAG SEQADV 8S8V HIS A -3 UNP Q9FEW9 EXPRESSION TAG SEQADV 8S8V HIS A -2 UNP Q9FEW9 EXPRESSION TAG SEQADV 8S8V HIS A -1 UNP Q9FEW9 EXPRESSION TAG SEQADV 8S8V HIS A 0 UNP Q9FEW9 EXPRESSION TAG SEQADV 8S8V ASP A 283 UNP Q9FEW9 ARG 283 ENGINEERED MUTATION SEQADV 8S8V HIS B -5 UNP Q9FEW9 EXPRESSION TAG SEQADV 8S8V HIS B -4 UNP Q9FEW9 EXPRESSION TAG SEQADV 8S8V HIS B -3 UNP Q9FEW9 EXPRESSION TAG SEQADV 8S8V HIS B -2 UNP Q9FEW9 EXPRESSION TAG SEQADV 8S8V HIS B -1 UNP Q9FEW9 EXPRESSION TAG SEQADV 8S8V HIS B 0 UNP Q9FEW9 EXPRESSION TAG SEQADV 8S8V ASP B 283 UNP Q9FEW9 ARG 283 ENGINEERED MUTATION SEQRES 1 A 402 HIS HIS HIS HIS HIS HIS MET ALA SER SER ALA GLN ASP SEQRES 2 A 402 GLY ASN ASN PRO LEU PHE SER PRO TYR LYS MET GLY LYS SEQRES 3 A 402 PHE ASN LEU SER HIS ARG VAL VAL LEU ALA PRO MET THR SEQRES 4 A 402 ARG CYS ARG ALA LEU ASN ASN ILE PRO GLN ALA ALA LEU SEQRES 5 A 402 GLY GLU TYR TYR GLU GLN ARG ALA THR ALA GLY GLY PHE SEQRES 6 A 402 LEU ILE THR GLU GLY THR MET ILE SER PRO THR SER ALA SEQRES 7 A 402 GLY PHE PRO HIS VAL PRO GLY ILE PHE THR LYS GLU GLN SEQRES 8 A 402 VAL ARG GLU TRP LYS LYS ILE VAL ASP VAL VAL HIS ALA SEQRES 9 A 402 LYS GLY ALA VAL ILE PHE CYS GLN LEU TRP HIS VAL GLY SEQRES 10 A 402 ARG ALA SER HIS GLU VAL TYR GLN PRO ALA GLY ALA ALA SEQRES 11 A 402 PRO ILE SER SER THR GLU LYS PRO ILE SER ASN ARG TRP SEQRES 12 A 402 ARG ILE LEU MET PRO ASP GLY THR HIS GLY ILE TYR PRO SEQRES 13 A 402 LYS PRO ARG ALA ILE GLY THR TYR GLU ILE SER GLN VAL SEQRES 14 A 402 VAL GLU ASP TYR ARG ARG SER ALA LEU ASN ALA ILE GLU SEQRES 15 A 402 ALA GLY PHE ASP GLY ILE GLU ILE HIS GLY ALA HIS GLY SEQRES 16 A 402 TYR LEU ILE ASP GLN PHE LEU LYS ASP GLY ILE ASN ASP SEQRES 17 A 402 ARG THR ASP GLU TYR GLY GLY SER LEU ALA ASN ARG CYS SEQRES 18 A 402 LYS PHE ILE THR GLN VAL VAL GLN ALA VAL VAL SER ALA SEQRES 19 A 402 ILE GLY ALA ASP ARG VAL GLY VAL ARG VAL SER PRO ALA SEQRES 20 A 402 ILE ASP HIS LEU ASP ALA MET ASP SER ASN PRO LEU SER SEQRES 21 A 402 LEU GLY LEU ALA VAL VAL GLU ARG LEU ASN LYS ILE GLN SEQRES 22 A 402 LEU HIS SER GLY SER LYS LEU ALA TYR LEU HIS VAL THR SEQRES 23 A 402 GLN PRO ASP TYR VAL ALA TYR GLY GLN THR GLU ALA GLY SEQRES 24 A 402 ARG LEU GLY SER GLU GLU GLU GLU ALA ARG LEU MET ARG SEQRES 25 A 402 THR LEU ARG ASN ALA TYR GLN GLY THR PHE ILE CYS SER SEQRES 26 A 402 GLY GLY TYR THR ARG GLU LEU GLY ILE GLU ALA VAL ALA SEQRES 27 A 402 GLN GLY ASP ALA ASP LEU VAL SER TYR GLY ARG LEU PHE SEQRES 28 A 402 ILE SER ASN PRO ASP LEU VAL MET ARG ILE LYS LEU ASN SEQRES 29 A 402 ALA PRO LEU ASN LYS TYR ASN ARG LYS THR PHE TYR THR SEQRES 30 A 402 GLN ASP PRO VAL VAL GLY TYR THR ASP TYR PRO PHE LEU SEQRES 31 A 402 GLN GLY ASN GLY SER ASN GLY PRO LEU SER ARG LEU SEQRES 1 B 402 HIS HIS HIS HIS HIS HIS MET ALA SER SER ALA GLN ASP SEQRES 2 B 402 GLY ASN ASN PRO LEU PHE SER PRO TYR LYS MET GLY LYS SEQRES 3 B 402 PHE ASN LEU SER HIS ARG VAL VAL LEU ALA PRO MET THR SEQRES 4 B 402 ARG CYS ARG ALA LEU ASN ASN ILE PRO GLN ALA ALA LEU SEQRES 5 B 402 GLY GLU TYR TYR GLU GLN ARG ALA THR ALA GLY GLY PHE SEQRES 6 B 402 LEU ILE THR GLU GLY THR MET ILE SER PRO THR SER ALA SEQRES 7 B 402 GLY PHE PRO HIS VAL PRO GLY ILE PHE THR LYS GLU GLN SEQRES 8 B 402 VAL ARG GLU TRP LYS LYS ILE VAL ASP VAL VAL HIS ALA SEQRES 9 B 402 LYS GLY ALA VAL ILE PHE CYS GLN LEU TRP HIS VAL GLY SEQRES 10 B 402 ARG ALA SER HIS GLU VAL TYR GLN PRO ALA GLY ALA ALA SEQRES 11 B 402 PRO ILE SER SER THR GLU LYS PRO ILE SER ASN ARG TRP SEQRES 12 B 402 ARG ILE LEU MET PRO ASP GLY THR HIS GLY ILE TYR PRO SEQRES 13 B 402 LYS PRO ARG ALA ILE GLY THR TYR GLU ILE SER GLN VAL SEQRES 14 B 402 VAL GLU ASP TYR ARG ARG SER ALA LEU ASN ALA ILE GLU SEQRES 15 B 402 ALA GLY PHE ASP GLY ILE GLU ILE HIS GLY ALA HIS GLY SEQRES 16 B 402 TYR LEU ILE ASP GLN PHE LEU LYS ASP GLY ILE ASN ASP SEQRES 17 B 402 ARG THR ASP GLU TYR GLY GLY SER LEU ALA ASN ARG CYS SEQRES 18 B 402 LYS PHE ILE THR GLN VAL VAL GLN ALA VAL VAL SER ALA SEQRES 19 B 402 ILE GLY ALA ASP ARG VAL GLY VAL ARG VAL SER PRO ALA SEQRES 20 B 402 ILE ASP HIS LEU ASP ALA MET ASP SER ASN PRO LEU SER SEQRES 21 B 402 LEU GLY LEU ALA VAL VAL GLU ARG LEU ASN LYS ILE GLN SEQRES 22 B 402 LEU HIS SER GLY SER LYS LEU ALA TYR LEU HIS VAL THR SEQRES 23 B 402 GLN PRO ASP TYR VAL ALA TYR GLY GLN THR GLU ALA GLY SEQRES 24 B 402 ARG LEU GLY SER GLU GLU GLU GLU ALA ARG LEU MET ARG SEQRES 25 B 402 THR LEU ARG ASN ALA TYR GLN GLY THR PHE ILE CYS SER SEQRES 26 B 402 GLY GLY TYR THR ARG GLU LEU GLY ILE GLU ALA VAL ALA SEQRES 27 B 402 GLN GLY ASP ALA ASP LEU VAL SER TYR GLY ARG LEU PHE SEQRES 28 B 402 ILE SER ASN PRO ASP LEU VAL MET ARG ILE LYS LEU ASN SEQRES 29 B 402 ALA PRO LEU ASN LYS TYR ASN ARG LYS THR PHE TYR THR SEQRES 30 B 402 GLN ASP PRO VAL VAL GLY TYR THR ASP TYR PRO PHE LEU SEQRES 31 B 402 GLN GLY ASN GLY SER ASN GLY PRO LEU SER ARG LEU HET FMN A 401 31 HET FMN B 401 31 HETNAM FMN FLAVIN MONONUCLEOTIDE HETSYN FMN RIBOFLAVIN MONOPHOSPHATE FORMUL 3 FMN 2(C17 H21 N4 O9 P) HELIX 1 AA1 ASN A 10 SER A 14 5 5 HELIX 2 AA2 ALA A 37 ILE A 41 5 5 HELIX 3 AA3 GLN A 43 ALA A 54 1 12 HELIX 4 AA4 THR A 82 LYS A 99 1 18 HELIX 5 AA5 HIS A 115 ALA A 123 5 9 HELIX 6 AA6 GLY A 156 ALA A 177 1 22 HELIX 7 AA7 TYR A 190 LYS A 197 1 8 HELIX 8 AA8 SER A 210 CYS A 215 1 6 HELIX 9 AA9 CYS A 215 GLY A 230 1 16 HELIX 10 AB1 ASP A 243 ALA A 247 5 5 HELIX 11 AB2 ASN A 251 GLY A 271 1 21 HELIX 12 AB3 ALA A 302 TYR A 312 1 11 HELIX 13 AB4 THR A 323 GLN A 333 1 11 HELIX 14 AB5 ARG A 343 ASN A 348 1 6 HELIX 15 AB6 ASP A 350 ASN A 358 1 9 HELIX 16 AB7 ASN A 365 PHE A 369 5 5 HELIX 17 AB8 ASN B 10 SER B 14 5 5 HELIX 18 AB9 ALA B 37 ILE B 41 5 5 HELIX 19 AC1 GLN B 43 ALA B 54 1 12 HELIX 20 AC2 THR B 82 LYS B 99 1 18 HELIX 21 AC3 HIS B 115 ALA B 123 5 9 HELIX 22 AC4 GLY B 156 ALA B 177 1 22 HELIX 23 AC5 TYR B 190 LYS B 197 1 8 HELIX 24 AC6 ALA B 212 ARG B 214 5 3 HELIX 25 AC7 CYS B 215 GLY B 230 1 16 HELIX 26 AC8 ASP B 243 ALA B 247 5 5 HELIX 27 AC9 ASN B 251 GLY B 271 1 21 HELIX 28 AD1 GLU B 301 TYR B 312 1 12 HELIX 29 AD2 THR B 323 GLN B 333 1 11 HELIX 30 AD3 GLY B 342 ASN B 348 1 7 HELIX 31 AD4 ASP B 350 ASN B 358 1 9 HELIX 32 AD5 ASN B 365 PHE B 369 5 5 SHEET 1 AA1 2 TYR A 16 MET A 18 0 SHEET 2 AA1 2 PHE A 21 LEU A 23 -1 O PHE A 21 N MET A 18 SHEET 1 AA210 THR A 65 MET A 66 0 SHEET 2 AA210 VAL A 102 TRP A 108 1 O TRP A 108 N THR A 65 SHEET 3 AA210 GLY A 181 HIS A 185 1 O GLY A 181 N CYS A 105 SHEET 4 AA210 VAL A 234 VAL A 238 1 O GLY A 235 N ILE A 184 SHEET 5 AA210 TYR A 276 THR A 280 1 O HIS A 278 N VAL A 236 SHEET 6 AA210 PHE A 316 SER A 319 1 O ILE A 317 N LEU A 277 SHEET 7 AA210 LEU A 338 TYR A 341 1 O SER A 340 N CYS A 318 SHEET 8 AA210 VAL A 27 LEU A 29 1 N VAL A 28 O TYR A 341 SHEET 9 AA210 PHE A 59 ILE A 61 1 O PHE A 59 N LEU A 29 SHEET 10 AA210 VAL A 102 TRP A 108 1 O VAL A 102 N LEU A 60 SHEET 1 AA3 2 ILE A 126 SER A 127 0 SHEET 2 AA3 2 ARG A 153 ALA A 154 1 O ARG A 153 N SER A 127 SHEET 1 AA4 2 ILE A 139 LEU A 140 0 SHEET 2 AA4 2 HIS A 146 GLY A 147 -1 O GLY A 147 N ILE A 139 SHEET 1 AA5 2 TYR B 16 MET B 18 0 SHEET 2 AA5 2 PHE B 21 LEU B 23 -1 O PHE B 21 N MET B 18 SHEET 1 AA610 THR B 65 MET B 66 0 SHEET 2 AA610 VAL B 102 TRP B 108 1 O TRP B 108 N THR B 65 SHEET 3 AA610 GLY B 181 HIS B 185 1 O GLU B 183 N LEU B 107 SHEET 4 AA610 VAL B 234 VAL B 238 1 O GLY B 235 N ILE B 182 SHEET 5 AA610 TYR B 276 THR B 280 1 O HIS B 278 N VAL B 236 SHEET 6 AA610 PHE B 316 SER B 319 1 O ILE B 317 N LEU B 277 SHEET 7 AA610 LEU B 338 TYR B 341 1 O SER B 340 N CYS B 318 SHEET 8 AA610 VAL B 27 LEU B 29 1 N VAL B 28 O VAL B 339 SHEET 9 AA610 PHE B 59 ILE B 61 1 O PHE B 59 N LEU B 29 SHEET 10 AA610 VAL B 102 TRP B 108 1 O VAL B 102 N LEU B 60 SHEET 1 AA7 2 ILE B 126 SER B 127 0 SHEET 2 AA7 2 ARG B 153 ALA B 154 1 O ARG B 153 N SER B 127 SHEET 1 AA8 2 ARG B 138 LEU B 140 0 SHEET 2 AA8 2 HIS B 146 ILE B 148 -1 O GLY B 147 N ILE B 139 CRYST1 86.390 89.314 95.528 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011575 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011196 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010468 0.00000