HEADER IMMUNE SYSTEM/INHIBITOR 08-APR-23 8SE6 TITLE NKG2D COMPLEXED WITH INHIBITOR 36 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NKG2-D TYPE II INTEGRAL MEMBRANE PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: KILLER CELL LECTIN-LIKE RECEPTOR SUBFAMILY K MEMBER 1,NK COMPND 5 CELL RECEPTOR D,NKG2-D-ACTIVATING NK RECEPTOR; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KLRK1, D12S2489E, NKG2D; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NKG2D, DEL, CRYPTIC POCKET, IMMUNORECEPTORS, IMMUNE SYSTEM, SIGNALING KEYWDS 2 PROTEIN, IMMUNE SYSTEM-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.A.THOMPSON,J.C.GRANT,N.K.KARPOWICH,S.SHARMA REVDAT 2 01-NOV-23 8SE6 1 JRNL REVDAT 1 11-OCT-23 8SE6 0 JRNL AUTH J.WANG,K.M.NAKAFUKU,J.ZIFF,C.F.GELIN,H.GHOLAMI,A.A.THOMPSON, JRNL AUTH 2 N.K.KARPOWICH,L.LIMON,H.R.COATE,K.L.DAMM-GANAMET,A.Y.SHIH, JRNL AUTH 3 J.C.GRANT,M.COTE,P.A.MAK,H.A.PASCUAL,M.L.RIVES,J.P.EDWARDS, JRNL AUTH 4 J.D.VENABLE,H.VENKATESAN,Z.SHI,S.J.ALLEN,S.SHARMA,P.P.KUNG, JRNL AUTH 5 B.T.SHIREMAN JRNL TITL DEVELOPMENT OF SMALL MOLECULE INHIBITORS OF NATURAL KILLER JRNL TITL 2 GROUP 2D RECEPTOR (NKG2D). JRNL REF BIOORG.MED.CHEM.LETT. V. 96 29492 2023 JRNL REFN ESSN 1464-3405 JRNL PMID 37778428 JRNL DOI 10.1016/J.BMCL.2023.129492 REMARK 2 REMARK 2 RESOLUTION. 1.36 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.36 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.44 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.0 REMARK 3 NUMBER OF REFLECTIONS : 52815 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 2617 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.4400 - 3.6300 1.00 3008 153 0.1732 0.1925 REMARK 3 2 3.6300 - 2.8800 1.00 2933 159 0.1846 0.1902 REMARK 3 3 2.8800 - 2.5200 1.00 2935 140 0.1829 0.1822 REMARK 3 4 2.5200 - 2.2900 1.00 2895 137 0.1749 0.1861 REMARK 3 5 2.2900 - 2.1200 0.99 2939 136 0.1788 0.1994 REMARK 3 6 2.1200 - 2.0000 0.99 2865 148 0.1771 0.1933 REMARK 3 7 2.0000 - 1.9000 0.99 2847 147 0.1830 0.2164 REMARK 3 8 1.9000 - 1.8100 0.99 2880 129 0.1862 0.1838 REMARK 3 9 1.8100 - 1.7400 0.98 2840 146 0.1940 0.2052 REMARK 3 10 1.7400 - 1.6800 0.98 2827 143 0.2017 0.2190 REMARK 3 11 1.6800 - 1.6300 0.97 2856 137 0.2126 0.2602 REMARK 3 12 1.6300 - 1.5800 0.97 2823 138 0.2263 0.2042 REMARK 3 13 1.5800 - 1.5400 0.98 2767 170 0.2400 0.2663 REMARK 3 14 1.5400 - 1.5100 0.96 2777 152 0.2641 0.2764 REMARK 3 15 1.5100 - 1.4700 0.93 2643 165 0.2929 0.2967 REMARK 3 16 1.4700 - 1.4400 0.82 2350 136 0.3210 0.3612 REMARK 3 17 1.4400 - 1.4100 0.67 1965 105 0.3346 0.3590 REMARK 3 18 1.4100 - 1.3800 0.58 1653 90 0.3571 0.3954 REMARK 3 19 1.3800 - 1.3600 0.49 1395 86 0.3875 0.4875 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.740 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2112 REMARK 3 ANGLE : 0.910 2848 REMARK 3 CHIRALITY : 0.089 282 REMARK 3 PLANARITY : 0.005 362 REMARK 3 DIHEDRAL : 10.562 294 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 92 THROUGH 130 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.6819 -15.6076 14.1410 REMARK 3 T TENSOR REMARK 3 T11: 0.1388 T22: 0.1595 REMARK 3 T33: 0.1111 T12: 0.0047 REMARK 3 T13: 0.0011 T23: -0.0060 REMARK 3 L TENSOR REMARK 3 L11: 2.8960 L22: 3.3381 REMARK 3 L33: 1.8367 L12: 1.6313 REMARK 3 L13: -0.7396 L23: -1.1279 REMARK 3 S TENSOR REMARK 3 S11: -0.0063 S12: 0.0144 S13: 0.0982 REMARK 3 S21: -0.0122 S22: 0.0133 S23: 0.3192 REMARK 3 S31: -0.1306 S32: -0.1302 S33: -0.0088 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 131 THROUGH 167 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.5479 -26.4797 11.9975 REMARK 3 T TENSOR REMARK 3 T11: 0.1682 T22: 0.1091 REMARK 3 T33: 0.1718 T12: 0.0046 REMARK 3 T13: -0.0132 T23: -0.0270 REMARK 3 L TENSOR REMARK 3 L11: 3.7714 L22: 2.5539 REMARK 3 L33: 4.3914 L12: 0.3190 REMARK 3 L13: -0.3838 L23: 0.0843 REMARK 3 S TENSOR REMARK 3 S11: -0.0005 S12: 0.1315 S13: -0.3854 REMARK 3 S21: -0.2781 S22: 0.0394 S23: 0.0338 REMARK 3 S31: 0.2449 S32: 0.0091 S33: -0.0374 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 168 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.2941 -34.5787 11.5376 REMARK 3 T TENSOR REMARK 3 T11: 0.2247 T22: 0.1268 REMARK 3 T33: 0.3083 T12: -0.0246 REMARK 3 T13: -0.0672 T23: -0.0508 REMARK 3 L TENSOR REMARK 3 L11: 3.9653 L22: 2.5417 REMARK 3 L33: 4.5598 L12: -1.3383 REMARK 3 L13: -0.5540 L23: -1.7871 REMARK 3 S TENSOR REMARK 3 S11: -0.0024 S12: 0.0552 S13: -0.2507 REMARK 3 S21: -0.1284 S22: -0.0357 S23: 0.1637 REMARK 3 S31: 0.3456 S32: -0.0900 S33: 0.0289 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 189 THROUGH 216 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.5738 -26.7439 16.8153 REMARK 3 T TENSOR REMARK 3 T11: 0.1336 T22: 0.1614 REMARK 3 T33: 0.1702 T12: -0.0134 REMARK 3 T13: -0.0107 T23: -0.0118 REMARK 3 L TENSOR REMARK 3 L11: 2.7130 L22: 3.6408 REMARK 3 L33: 1.0410 L12: 0.7101 REMARK 3 L13: -0.7557 L23: 0.0313 REMARK 3 S TENSOR REMARK 3 S11: 0.0682 S12: 0.0191 S13: -0.2796 REMARK 3 S21: -0.1401 S22: -0.0195 S23: 0.1094 REMARK 3 S31: 0.0552 S32: -0.0822 S33: -0.0664 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 92 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.5900 -6.6929 6.7488 REMARK 3 T TENSOR REMARK 3 T11: 0.2381 T22: 0.2077 REMARK 3 T33: 0.2007 T12: -0.0097 REMARK 3 T13: -0.0161 T23: 0.0008 REMARK 3 L TENSOR REMARK 3 L11: 0.0546 L22: 0.7126 REMARK 3 L33: 3.9517 L12: -0.0621 REMARK 3 L13: -0.2708 L23: 0.5968 REMARK 3 S TENSOR REMARK 3 S11: -0.0682 S12: 0.3783 S13: -0.2455 REMARK 3 S21: -0.1480 S22: 0.0139 S23: 0.2345 REMARK 3 S31: -0.3320 S32: 0.0931 S33: 0.0677 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 104 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.8966 -8.4843 13.4605 REMARK 3 T TENSOR REMARK 3 T11: 0.1947 T22: 0.1561 REMARK 3 T33: 0.1140 T12: -0.0327 REMARK 3 T13: 0.0046 T23: 0.0053 REMARK 3 L TENSOR REMARK 3 L11: 4.3881 L22: 3.6281 REMARK 3 L33: 4.3823 L12: -1.5170 REMARK 3 L13: 2.9388 L23: -0.7739 REMARK 3 S TENSOR REMARK 3 S11: 0.0121 S12: 0.1472 S13: 0.0078 REMARK 3 S21: -0.1761 S22: 0.0032 S23: 0.0213 REMARK 3 S31: -0.1147 S32: -0.0192 S33: 0.0580 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 115 THROUGH 130 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.7070 -11.0226 15.5829 REMARK 3 T TENSOR REMARK 3 T11: 0.1304 T22: 0.2752 REMARK 3 T33: 0.1952 T12: -0.0160 REMARK 3 T13: 0.0612 T23: -0.0668 REMARK 3 L TENSOR REMARK 3 L11: 4.5286 L22: 1.6101 REMARK 3 L33: 7.4778 L12: 1.0018 REMARK 3 L13: 2.2031 L23: -0.3798 REMARK 3 S TENSOR REMARK 3 S11: 0.0440 S12: 0.6825 S13: -0.5150 REMARK 3 S21: -0.2322 S22: 0.1657 S23: -0.2360 REMARK 3 S31: 0.0857 S32: 0.4143 S33: -0.1775 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 131 THROUGH 159 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.6278 -6.2940 22.1623 REMARK 3 T TENSOR REMARK 3 T11: 0.1219 T22: 0.1093 REMARK 3 T33: 0.0780 T12: -0.0029 REMARK 3 T13: 0.0209 T23: -0.0007 REMARK 3 L TENSOR REMARK 3 L11: 3.2825 L22: 2.7541 REMARK 3 L33: 1.8856 L12: -0.8220 REMARK 3 L13: 0.8972 L23: 0.0881 REMARK 3 S TENSOR REMARK 3 S11: -0.0895 S12: -0.0230 S13: -0.0404 REMARK 3 S21: 0.0191 S22: 0.0255 S23: 0.1318 REMARK 3 S31: -0.1079 S32: -0.0623 S33: 0.0483 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 160 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.4734 2.6700 26.9890 REMARK 3 T TENSOR REMARK 3 T11: 0.4367 T22: 0.2750 REMARK 3 T33: 0.3959 T12: -0.0392 REMARK 3 T13: -0.0984 T23: -0.0613 REMARK 3 L TENSOR REMARK 3 L11: 8.2161 L22: 2.9444 REMARK 3 L33: 5.0694 L12: 1.5710 REMARK 3 L13: 4.8948 L23: 3.3215 REMARK 3 S TENSOR REMARK 3 S11: -0.3717 S12: -0.4661 S13: 1.2709 REMARK 3 S21: 0.7382 S22: 0.2580 S23: -0.9435 REMARK 3 S31: -0.7365 S32: 0.4068 S33: 0.1040 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 169 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.9645 3.1212 25.6819 REMARK 3 T TENSOR REMARK 3 T11: 0.2896 T22: 0.1592 REMARK 3 T33: 0.2844 T12: -0.0363 REMARK 3 T13: -0.0654 T23: 0.0085 REMARK 3 L TENSOR REMARK 3 L11: 2.4175 L22: 2.6302 REMARK 3 L33: 3.7616 L12: 0.9052 REMARK 3 L13: -0.7328 L23: -1.8134 REMARK 3 S TENSOR REMARK 3 S11: -0.2244 S12: 0.1942 S13: 0.5156 REMARK 3 S21: -0.2054 S22: 0.0388 S23: 0.0424 REMARK 3 S31: -0.3138 S32: 0.0969 S33: 0.1701 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 180 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.0695 -8.6493 26.0354 REMARK 3 T TENSOR REMARK 3 T11: 0.1083 T22: 0.1104 REMARK 3 T33: 0.1114 T12: -0.0141 REMARK 3 T13: 0.0254 T23: 0.0115 REMARK 3 L TENSOR REMARK 3 L11: 2.9931 L22: 1.3736 REMARK 3 L33: 1.9243 L12: -0.0379 REMARK 3 L13: 0.6947 L23: 0.6671 REMARK 3 S TENSOR REMARK 3 S11: -0.0671 S12: 0.0033 S13: -0.0552 REMARK 3 S21: 0.0343 S22: 0.0489 S23: -0.1317 REMARK 3 S31: -0.0428 S32: 0.1069 S33: 0.0155 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8SE6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-APR-23. REMARK 100 THE DEPOSITION ID IS D_1000272106. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-FEB-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52859 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.360 REMARK 200 RESOLUTION RANGE LOW (A) : 62.580 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.1 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.36 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.38 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : 0.77800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.15 - 0.22 M NANO3, 20- 31 % (W/V) REMARK 280 PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 50.02050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 21.74150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 50.02050 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 21.74150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 448 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 496 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 88 REMARK 465 GLY A 89 REMARK 465 PRO A 90 REMARK 465 LEU A 91 REMARK 465 THR A 162 REMARK 465 ASN A 163 REMARK 465 GLY A 164 REMARK 465 SER A 165 REMARK 465 MET B 88 REMARK 465 GLY B 89 REMARK 465 PRO B 90 REMARK 465 LEU B 91 REMARK 465 PRO B 161 REMARK 465 THR B 162 REMARK 465 ASN B 163 REMARK 465 VAL B 216 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 169 CG CD OE1 OE2 REMARK 470 LYS B 101 CG CD CE NZ REMARK 470 LYS B 186 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 108 -0.49 77.62 REMARK 500 SER A 151 -155.24 54.75 REMARK 500 MET A 184 -65.99 -134.11 REMARK 500 SER B 151 -163.36 67.27 REMARK 500 REMARK 500 REMARK: NULL DBREF 8SE6 A 90 216 UNP P26718 NKG2D_HUMAN 90 216 DBREF 8SE6 B 90 216 UNP P26718 NKG2D_HUMAN 90 216 SEQADV 8SE6 MET A 88 UNP P26718 INITIATING METHIONINE SEQADV 8SE6 GLY A 89 UNP P26718 EXPRESSION TAG SEQADV 8SE6 GLU A 117 UNP P26718 SER 117 ENGINEERED MUTATION SEQADV 8SE6 SER A 173 UNP P26718 ILE 173 ENGINEERED MUTATION SEQADV 8SE6 MET B 88 UNP P26718 INITIATING METHIONINE SEQADV 8SE6 GLY B 89 UNP P26718 EXPRESSION TAG SEQADV 8SE6 GLU B 117 UNP P26718 SER 117 ENGINEERED MUTATION SEQADV 8SE6 SER B 173 UNP P26718 ILE 173 ENGINEERED MUTATION SEQRES 1 A 129 MET GLY PRO LEU THR GLU SER TYR CYS GLY PRO CYS PRO SEQRES 2 A 129 LYS ASN TRP ILE CYS TYR LYS ASN ASN CYS TYR GLN PHE SEQRES 3 A 129 PHE ASP GLU GLU LYS ASN TRP TYR GLU SER GLN ALA SER SEQRES 4 A 129 CYS MET SER GLN ASN ALA SER LEU LEU LYS VAL TYR SER SEQRES 5 A 129 LYS GLU ASP GLN ASP LEU LEU LYS LEU VAL LYS SER TYR SEQRES 6 A 129 HIS TRP MET GLY LEU VAL HIS ILE PRO THR ASN GLY SER SEQRES 7 A 129 TRP GLN TRP GLU ASP GLY SER SER LEU SER PRO ASN LEU SEQRES 8 A 129 LEU THR ILE ILE GLU MET GLN LYS GLY ASP CYS ALA LEU SEQRES 9 A 129 TYR ALA SER SER PHE LYS GLY TYR ILE GLU ASN CYS SER SEQRES 10 A 129 THR PRO ASN THR TYR ILE CYS MET GLN ARG THR VAL SEQRES 1 B 129 MET GLY PRO LEU THR GLU SER TYR CYS GLY PRO CYS PRO SEQRES 2 B 129 LYS ASN TRP ILE CYS TYR LYS ASN ASN CYS TYR GLN PHE SEQRES 3 B 129 PHE ASP GLU GLU LYS ASN TRP TYR GLU SER GLN ALA SER SEQRES 4 B 129 CYS MET SER GLN ASN ALA SER LEU LEU LYS VAL TYR SER SEQRES 5 B 129 LYS GLU ASP GLN ASP LEU LEU LYS LEU VAL LYS SER TYR SEQRES 6 B 129 HIS TRP MET GLY LEU VAL HIS ILE PRO THR ASN GLY SER SEQRES 7 B 129 TRP GLN TRP GLU ASP GLY SER SER LEU SER PRO ASN LEU SEQRES 8 B 129 LEU THR ILE ILE GLU MET GLN LYS GLY ASP CYS ALA LEU SEQRES 9 B 129 TYR ALA SER SER PHE LYS GLY TYR ILE GLU ASN CYS SER SEQRES 10 B 129 THR PRO ASN THR TYR ILE CYS MET GLN ARG THR VAL HET PGE A 301 10 HET PGE A 302 10 HET PGE A 303 10 HET ZWA B 301 40 HET PGE B 302 10 HET PG4 B 303 13 HETNAM PGE TRIETHYLENE GLYCOL HETNAM ZWA N-[(1S)-2-(DIMETHYLAMINO)-2-OXO-1-{3-[3-(2,2,2- HETNAM 2 ZWA TRIFLUOROETHYL)AZETIDIN-1-YL]PHENYL}ETHYL]-4'- HETNAM 3 ZWA (TRIFLUOROMETHYL)[1,1'-BIPHENYL]-2-CARBOXAMIDE HETNAM PG4 TETRAETHYLENE GLYCOL FORMUL 3 PGE 4(C6 H14 O4) FORMUL 6 ZWA C29 H27 F6 N3 O2 FORMUL 8 PG4 C8 H18 O5 FORMUL 9 HOH *162(H2 O) HELIX 1 AA1 ASN A 119 GLN A 130 1 12 HELIX 2 AA2 GLN A 143 VAL A 149 5 7 HELIX 3 AA3 ASN B 119 GLN B 130 1 12 HELIX 4 AA4 GLN B 143 VAL B 149 5 7 SHEET 1 AA1 2 GLU A 93 PRO A 100 0 SHEET 2 AA1 2 GLU B 93 PRO B 100 -1 O CYS B 96 N CYS A 96 SHEET 1 AA2 5 ILE A 104 TYR A 106 0 SHEET 2 AA2 5 ASN A 109 LYS A 118 -1 O TYR A 111 N ILE A 104 SHEET 3 AA2 5 ASN A 207 GLN A 213 -1 O GLN A 213 N CYS A 110 SHEET 4 AA2 5 HIS A 153 VAL A 158 1 N TRP A 154 O THR A 208 SHEET 5 AA2 5 GLN A 167 TRP A 168 -1 O GLN A 167 N VAL A 158 SHEET 1 AA3 6 SER A 133 LEU A 134 0 SHEET 2 AA3 6 ASN A 207 GLN A 213 -1 O MET A 212 N SER A 133 SHEET 3 AA3 6 HIS A 153 VAL A 158 1 N TRP A 154 O THR A 208 SHEET 4 AA3 6 CYS A 189 ALA A 193 -1 O TYR A 192 N HIS A 153 SHEET 5 AA3 6 LYS A 197 GLU A 201 -1 O TYR A 199 N LEU A 191 SHEET 6 AA3 6 THR A 180 GLU A 183 1 N ILE A 182 O GLY A 198 SHEET 1 AA4 4 ILE B 104 TYR B 106 0 SHEET 2 AA4 4 ASN B 109 LYS B 118 -1 O TYR B 111 N ILE B 104 SHEET 3 AA4 4 ASN B 207 ARG B 214 -1 O GLN B 213 N CYS B 110 SHEET 4 AA4 4 SER B 133 LEU B 134 -1 N SER B 133 O MET B 212 SHEET 1 AA5 5 TRP B 166 TRP B 168 0 SHEET 2 AA5 5 TYR B 152 HIS B 159 -1 N VAL B 158 O GLN B 167 SHEET 3 AA5 5 CYS B 189 ALA B 193 -1 O TYR B 192 N HIS B 153 SHEET 4 AA5 5 LYS B 197 GLU B 201 -1 O GLU B 201 N CYS B 189 SHEET 5 AA5 5 THR B 180 GLU B 183 1 N ILE B 182 O GLY B 198 SSBOND 1 CYS A 96 CYS A 105 1555 1555 2.01 SSBOND 2 CYS A 99 CYS A 110 1555 1555 2.01 SSBOND 3 CYS A 127 CYS A 211 1555 1555 2.04 SSBOND 4 CYS A 189 CYS A 203 1555 1555 2.05 SSBOND 5 CYS B 96 CYS B 105 1555 1555 2.06 SSBOND 6 CYS B 99 CYS B 110 1555 1555 2.00 SSBOND 7 CYS B 127 CYS B 211 1555 1555 2.05 SSBOND 8 CYS B 189 CYS B 203 1555 1555 2.05 CISPEP 1 GLY A 97 PRO A 98 0 2.73 CISPEP 2 SER A 194 SER A 195 0 1.94 CISPEP 3 GLY B 97 PRO B 98 0 6.26 CISPEP 4 SER B 194 SER B 195 0 -3.75 CISPEP 5 SER B 194 SER B 195 0 -3.18 CRYST1 100.041 43.483 64.188 90.00 102.87 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009996 0.000000 0.002284 0.00000 SCALE2 0.000000 0.022997 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015981 0.00000