HEADER LIGASE 10-APR-23 8SF3 TITLE CRYSTAL STRUCTURE OF ACETYL-COENZYME A SYNTHETASE FROM LEISHMANIA TITLE 2 INFANTUM (AMP, ACETATE AND COA BOUND) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACETYL-COENZYME A SYNTHETASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 2,3-DIHYDRO-2,3-DIHYDROXYBENZOATE DEHYDROGENASE; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEISHMANIA INFANTUM; SOURCE 3 ORGANISM_TAXID: 5671; SOURCE 4 GENE: LINJ_23_0580; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: LEINA.00629.B.B1 KEYWDS SSGCID, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 2 INFECTIOUS DISEASE, LIGASE, ACETYL-COENZYME A SYNTHETASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE,SEATTLE AUTHOR 2 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 1 19-APR-23 8SF3 0 JRNL AUTH L.LIU,S.LOVELL,K.P.BATTAILE JRNL TITL CRYSTAL STRUCTURE OF ACETYL-COENZYME A SYNTHETASE FROM JRNL TITL 2 LEISHMANIA INFANTUM (AMP AND COA BOUND) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.21RC1_4924: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.95 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 68857 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.950 REMARK 3 FREE R VALUE TEST SET COUNT : 3405 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.9500 - 4.9000 0.99 2960 138 0.1514 0.1774 REMARK 3 2 4.9000 - 3.8900 1.00 2845 131 0.1116 0.1375 REMARK 3 3 3.8900 - 3.4000 1.00 2825 132 0.1335 0.1687 REMARK 3 4 3.4000 - 3.0900 1.00 2776 146 0.1486 0.1827 REMARK 3 5 3.0900 - 2.8700 1.00 2775 139 0.1525 0.1823 REMARK 3 6 2.8700 - 2.7000 1.00 2735 149 0.1516 0.1823 REMARK 3 7 2.7000 - 2.5600 1.00 2714 167 0.1470 0.1929 REMARK 3 8 2.5600 - 2.4500 1.00 2766 117 0.1403 0.2028 REMARK 3 9 2.4500 - 2.3600 1.00 2732 137 0.1398 0.1884 REMARK 3 10 2.3600 - 2.2800 1.00 2699 158 0.1368 0.1740 REMARK 3 11 2.2800 - 2.2000 1.00 2716 158 0.1397 0.1773 REMARK 3 12 2.2000 - 2.1400 0.99 2712 146 0.1586 0.2239 REMARK 3 13 2.1400 - 2.0900 0.99 2698 141 0.1615 0.1957 REMARK 3 14 2.0900 - 2.0300 1.00 2704 130 0.1613 0.2067 REMARK 3 15 2.0300 - 1.9900 0.99 2699 152 0.1610 0.2134 REMARK 3 16 1.9900 - 1.9500 0.99 2702 134 0.1650 0.1982 REMARK 3 17 1.9500 - 1.9100 1.00 2710 128 0.1701 0.2349 REMARK 3 18 1.9100 - 1.8700 0.98 2648 143 0.1750 0.2079 REMARK 3 19 1.8700 - 1.8400 0.99 2709 139 0.1912 0.2242 REMARK 3 20 1.8400 - 1.8100 0.99 2650 165 0.2020 0.2404 REMARK 3 21 1.8100 - 1.7800 0.99 2662 133 0.2108 0.2348 REMARK 3 22 1.7800 - 1.7500 0.99 2701 124 0.2247 0.2926 REMARK 3 23 1.7500 - 1.7200 0.98 2667 148 0.2413 0.2703 REMARK 3 24 1.7200 - 1.7000 0.99 2647 150 0.2567 0.2826 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.250 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 5459 REMARK 3 ANGLE : 1.012 7458 REMARK 3 CHIRALITY : 0.061 812 REMARK 3 PLANARITY : 0.010 957 REMARK 3 DIHEDRAL : 12.859 1965 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 47 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.3054 1.8651 37.6129 REMARK 3 T TENSOR REMARK 3 T11: 0.1938 T22: 0.2243 REMARK 3 T33: 0.1178 T12: 0.0027 REMARK 3 T13: 0.0332 T23: 0.0015 REMARK 3 L TENSOR REMARK 3 L11: 1.7966 L22: 1.5258 REMARK 3 L33: 1.6629 L12: 0.2158 REMARK 3 L13: 0.8176 L23: 0.3973 REMARK 3 S TENSOR REMARK 3 S11: 0.0279 S12: -0.2910 S13: 0.0158 REMARK 3 S21: 0.1342 S22: -0.0443 S23: 0.1127 REMARK 3 S31: -0.0535 S32: -0.0970 S33: 0.0174 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 94 THROUGH 221 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.4884 -6.8158 25.0135 REMARK 3 T TENSOR REMARK 3 T11: 0.1440 T22: 0.1742 REMARK 3 T33: 0.1583 T12: -0.0076 REMARK 3 T13: -0.0065 T23: 0.0253 REMARK 3 L TENSOR REMARK 3 L11: 0.9815 L22: 0.6682 REMARK 3 L33: 0.6707 L12: 0.0868 REMARK 3 L13: 0.0484 L23: -0.0246 REMARK 3 S TENSOR REMARK 3 S11: 0.0067 S12: -0.1083 S13: -0.0819 REMARK 3 S21: 0.0139 S22: -0.0248 S23: -0.0281 REMARK 3 S31: 0.0148 S32: 0.0791 S33: 0.0202 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 222 THROUGH 265 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.9301 -9.0583 7.8244 REMARK 3 T TENSOR REMARK 3 T11: 0.1829 T22: 0.2486 REMARK 3 T33: 0.1865 T12: 0.0435 REMARK 3 T13: 0.0321 T23: 0.0323 REMARK 3 L TENSOR REMARK 3 L11: 2.5934 L22: 4.7396 REMARK 3 L33: 3.1194 L12: 1.0754 REMARK 3 L13: 0.7624 L23: 1.1516 REMARK 3 S TENSOR REMARK 3 S11: -0.0268 S12: 0.2495 S13: 0.1024 REMARK 3 S21: -0.3148 S22: -0.0689 S23: -0.1183 REMARK 3 S31: 0.0083 S32: 0.2264 S33: 0.0902 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 266 THROUGH 305 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.4644 -17.7495 21.7272 REMARK 3 T TENSOR REMARK 3 T11: 0.1479 T22: 0.2342 REMARK 3 T33: 0.2791 T12: 0.0440 REMARK 3 T13: -0.0091 T23: 0.0613 REMARK 3 L TENSOR REMARK 3 L11: 1.5269 L22: 2.7392 REMARK 3 L33: 1.6662 L12: -0.7995 REMARK 3 L13: -0.7959 L23: 0.2569 REMARK 3 S TENSOR REMARK 3 S11: -0.0901 S12: -0.1721 S13: -0.1995 REMARK 3 S21: 0.0323 S22: -0.0386 S23: -0.2057 REMARK 3 S31: 0.3397 S32: 0.3334 S33: 0.1190 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 306 THROUGH 559 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.5925 -1.9434 19.1924 REMARK 3 T TENSOR REMARK 3 T11: 0.1634 T22: 0.1493 REMARK 3 T33: 0.1298 T12: -0.0025 REMARK 3 T13: 0.0066 T23: 0.0109 REMARK 3 L TENSOR REMARK 3 L11: 0.9275 L22: 0.8320 REMARK 3 L33: 0.3896 L12: 0.3210 REMARK 3 L13: 0.0947 L23: -0.0481 REMARK 3 S TENSOR REMARK 3 S11: -0.0291 S12: -0.0167 S13: 0.0418 REMARK 3 S21: -0.0524 S22: 0.0135 S23: 0.0394 REMARK 3 S31: -0.0202 S32: -0.0311 S33: 0.0143 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 560 THROUGH 612 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.4355 4.1569 0.6004 REMARK 3 T TENSOR REMARK 3 T11: 0.2723 T22: 0.1907 REMARK 3 T33: 0.2409 T12: 0.0052 REMARK 3 T13: -0.0055 T23: 0.0498 REMARK 3 L TENSOR REMARK 3 L11: 3.4240 L22: 0.4230 REMARK 3 L33: 3.1314 L12: -0.9475 REMARK 3 L13: -3.1555 L23: 1.0917 REMARK 3 S TENSOR REMARK 3 S11: -0.0456 S12: -0.0781 S13: 0.1658 REMARK 3 S21: -0.0579 S22: 0.1223 S23: -0.0865 REMARK 3 S31: 0.0860 S32: 0.0925 S33: -0.0811 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 613 THROUGH 672 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.6324 4.1416 -11.9684 REMARK 3 T TENSOR REMARK 3 T11: 0.2152 T22: 0.1691 REMARK 3 T33: 0.1578 T12: -0.0072 REMARK 3 T13: 0.0193 T23: 0.0263 REMARK 3 L TENSOR REMARK 3 L11: 2.1740 L22: 3.1114 REMARK 3 L33: 1.6980 L12: -1.0913 REMARK 3 L13: 0.6689 L23: -0.5269 REMARK 3 S TENSOR REMARK 3 S11: 0.1162 S12: 0.1817 S13: 0.1384 REMARK 3 S21: -0.3404 S22: -0.0228 S23: 0.0252 REMARK 3 S31: -0.0706 S32: -0.0027 S33: -0.0969 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 673 THROUGH 711 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.5578 10.3246 -15.3204 REMARK 3 T TENSOR REMARK 3 T11: 0.2640 T22: 0.2662 REMARK 3 T33: 0.3423 T12: 0.0590 REMARK 3 T13: -0.0727 T23: 0.0613 REMARK 3 L TENSOR REMARK 3 L11: 5.1385 L22: 8.3649 REMARK 3 L33: 4.0141 L12: 2.1360 REMARK 3 L13: -0.4547 L23: -0.7200 REMARK 3 S TENSOR REMARK 3 S11: 0.1392 S12: 0.1790 S13: -0.1468 REMARK 3 S21: -0.1750 S22: 0.0433 S23: 0.0970 REMARK 3 S31: 0.2603 S32: -0.0105 S33: -0.1581 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8SF3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-APR-23. REMARK 100 THE DEPOSITION ID IS D_1000273673. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-MAR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68961 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 151.620 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 13.00 REMARK 200 R MERGE (I) : 0.12800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 13.60 REMARK 200 R MERGE FOR SHELL (I) : 1.75000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTAL SCREEN HT A9: 30% PEG 4K, 0.2M REMARK 280 AMMONIUM ACETATE, 0.1M SODIUM CITRATE PH 5.6. REMARK 280 LEINA.00629.B.B1.PW39174 AT 20 MG/ML. PLATE: 13158 WELL A9 DROP REMARK 280 2. PUCK: PSL-1408, CRYO: DIRECT. 2MM AMP AND COA ADDED PRIOR TO REMARK 280 CRYSTALLIZATION. COA IS EITHER DISORDERED OR WAS HYDRYLOZED. REMARK 280 ACETATE FROM THE CRYSTALLIZATION IS BOUND NEAR THE AMP., VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.50850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.80950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.69150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.80950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.50850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.69150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASP A 3 REMARK 465 ASN A 4 REMARK 465 PRO A 5 REMARK 465 HIS A 6 REMARK 465 SER A 7 REMARK 465 LEU A 8 REMARK 465 HIS A 9 REMARK 465 PRO A 10 REMARK 465 LEU A 11 REMARK 465 SER A 12 REMARK 465 SER A 13 REMARK 465 ASP A 14 REMARK 465 SER A 15 REMARK 465 THR A 16 REMARK 465 SER A 17 REMARK 465 GLN A 18 REMARK 465 ALA A 19 REMARK 465 LEU A 20 REMARK 465 HIS A 21 REMARK 465 SER A 22 REMARK 465 SER A 23 REMARK 465 THR A 24 REMARK 465 LYS A 25 REMARK 465 PRO A 26 REMARK 465 PRO A 27 REMARK 465 ALA A 28 REMARK 465 THR A 29 REMARK 465 PRO A 30 REMARK 465 HIS A 31 REMARK 465 GLU A 32 REMARK 465 GLY A 33 REMARK 465 GLU A 34 REMARK 465 PHE A 35 REMARK 465 HIS A 36 REMARK 465 SER A 37 REMARK 465 VAL A 38 REMARK 465 ASN A 271 REMARK 465 ARG A 272 REMARK 465 GLN A 273 REMARK 465 GLN A 704 REMARK 465 ASN A 705 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 39 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 276 CG CD CE NZ REMARK 470 GLN A 619 CG CD OE1 NE2 REMARK 470 GLU A 622 CG CD OE1 OE2 REMARK 470 ARG A 652 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 689 CG OD1 OD2 REMARK 470 GLU A 692 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 56 -60.50 -90.92 REMARK 500 LEU A 127 -73.01 -144.88 REMARK 500 THR A 330 -60.55 -97.47 REMARK 500 VAL A 369 -69.50 -96.57 REMARK 500 VAL A 453 -62.71 -103.71 REMARK 500 TRP A 466 -173.15 -171.54 REMARK 500 THR A 490 -118.91 71.72 REMARK 500 ASP A 533 69.17 -155.62 REMARK 500 VAL A 595 -60.26 -90.07 REMARK 500 ILE A 639 -60.38 -109.34 REMARK 500 CYS A 702 -30.47 61.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1362 DISTANCE = 6.30 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 COA A 803 DBREF 8SF3 A 1 705 UNP A4I093 A4I093_LEIIN 1 705 SEQADV 8SF3 MET A -7 UNP A4I093 INITIATING METHIONINE SEQADV 8SF3 ALA A -6 UNP A4I093 EXPRESSION TAG SEQADV 8SF3 HIS A -5 UNP A4I093 EXPRESSION TAG SEQADV 8SF3 HIS A -4 UNP A4I093 EXPRESSION TAG SEQADV 8SF3 HIS A -3 UNP A4I093 EXPRESSION TAG SEQADV 8SF3 HIS A -2 UNP A4I093 EXPRESSION TAG SEQADV 8SF3 HIS A -1 UNP A4I093 EXPRESSION TAG SEQADV 8SF3 HIS A 0 UNP A4I093 EXPRESSION TAG SEQRES 1 A 713 MET ALA HIS HIS HIS HIS HIS HIS MET SER ASP ASN PRO SEQRES 2 A 713 HIS SER LEU HIS PRO LEU SER SER ASP SER THR SER GLN SEQRES 3 A 713 ALA LEU HIS SER SER THR LYS PRO PRO ALA THR PRO HIS SEQRES 4 A 713 GLU GLY GLU PHE HIS SER VAL ARG ASP SER ASN VAL VAL SEQRES 5 A 713 GLU PRO THR GLU ALA ASN GLY LYS LYS SER HIS VAL GLY SEQRES 6 A 713 PRO HIS LEU GLY SER ARG MET ARG ILE TYR GLU TYR SER SEQRES 7 A 713 ILE GLU HIS ASN ASP ALA PHE TRP ALA GLU ILE ALA ARG SEQRES 8 A 713 ARG ASP PHE TYR TRP LYS THR THR TRP PRO ASP ASP GLN SEQRES 9 A 713 HIS VAL LYS SER TYR ASN PHE ASP LYS SER LYS GLY PRO SEQRES 10 A 713 ILE PHE VAL LYS TRP PHE GLU GLY ALA VAL THR ASN VAL SEQRES 11 A 713 CYS TYR ASN ALA LEU ASP ARG HIS LEU PRO ALA HIS LYS SEQRES 12 A 713 ASP ARG VAL CYS PHE TYR PHE GLU GLY ASN ASP PRO SER SEQRES 13 A 713 VAL THR GLU ALA VAL THR TYR GLY SER MET TYR THR ARG SEQRES 14 A 713 VAL VAL GLU LEU ALA ASN VAL LEU LYS TYR GLN TYR GLY SEQRES 15 A 713 ILE ALA LYS GLY ASP ARG VAL GLY LEU TYR LEU PRO MET SEQRES 16 A 713 ILE PRO PHE ALA ALA VAL ALA MET LEU ALA CYS ALA ARG SEQRES 17 A 713 ILE GLY ALA VAL ILE THR VAL ILE PHE GLY GLY PHE SER SEQRES 18 A 713 ALA GLN ALA LEU SER SER ARG LEU LYS ASP ALA GLN THR SEQRES 19 A 713 LYS LEU LEU ILE THR ALA ASP ALA SER ALA ARG GLY THR SEQRES 20 A 713 LYS PRO ILE PRO LEU LYS ASP VAL ALA ASP GLU ALA LEU SEQRES 21 A 713 LYS GLU CYS GLU GLU GLU GLY MET SER ILE ALA CYS LEU SEQRES 22 A 713 VAL ALA GLU ASN MET ASN ARG GLN SER CYS LYS MET LYS SEQRES 23 A 713 GLU GLY ARG ASP THR TRP TYR GLY ASP ALA LEU ALA ARG SEQRES 24 A 713 LEU THR PRO GLU GLN HIS GLU GLU CYS PRO VAL GLU TRP SEQRES 25 A 713 MET ASP ALA GLU ASP VAL LEU PHE LEU LEU TYR THR SER SEQRES 26 A 713 GLY SER THR GLY LYS PRO LYS ALA ILE VAL HIS THR THR SEQRES 27 A 713 ALA GLY TYR MET VAL TYR ALA SER THR THR PHE MET TYR SEQRES 28 A 713 SER PHE ASP TYR HIS MET ASP ASP VAL TYR PHE CYS THR SEQRES 29 A 713 ALA ASP ILE GLY TRP ILE THR GLY HIS SER TYR VAL VAL SEQRES 30 A 713 TYR GLY PRO MET ILE HIS CYS ALA THR SER VAL LEU PHE SEQRES 31 A 713 GLU GLY VAL PRO ASN TYR PRO ASP TYR SER ARG TRP TRP SEQRES 32 A 713 GLN LEU VAL GLU LYS TYR LYS VAL SER ILE LEU TYR THR SEQRES 33 A 713 ALA PRO THR ALA ILE ARG SER LEU MET GLN ALA GLY ASP SEQRES 34 A 713 ASP TYR VAL LYS VAL GLY ASN ARG SER THR LEU ARG VAL SEQRES 35 A 713 LEU GLY SER VAL GLY GLU PRO ILE ASN VAL GLU ALA TRP SEQRES 36 A 713 LYS TRP LEU ARG ASP VAL GLY GLY GLU GLY HIS CYS ASP SEQRES 37 A 713 VAL SER ASP THR TRP TRP GLN THR GLU THR GLY GLY HIS SEQRES 38 A 713 MET ILE THR PRO MET PRO GLY CYS THR PRO MET LYS PRO SEQRES 39 A 713 GLY SER ALA THR LEU PRO PHE PHE GLY VAL GLN PRO VAL SEQRES 40 A 713 ILE LEU ASP PRO MET LYS LEU HIS GLU LYS GLN GLY PRO SEQRES 41 A 713 ALA GLU GLY LEU LEU ALA ILE ARG ALA PRO TRP PRO GLY SEQRES 42 A 713 MET ALA ARG THR ILE TYR GLY ASP HIS ALA ARG PHE GLU SEQRES 43 A 713 LYS THR TYR PHE GLY VAL ASP GLY TYR TYR MET THR GLY SEQRES 44 A 713 ASP GLY ALA ARG ARG ASP SER ASP GLY TYR TYR TRP ILE SEQRES 45 A 713 THR GLY ARG VAL ASP ASP VAL LEU ASN VAL SER GLY HIS SEQRES 46 A 713 ARG ILE GLY THR SER GLU ILE GLU ASP ALA VAL ASN THR SEQRES 47 A 713 HIS PRO ALA VAL VAL GLU SER ALA VAL VAL GLY PHE PRO SEQRES 48 A 713 HIS ASN ILE LYS GLY GLU GLY ILE TYR VAL PHE LEU THR SEQRES 49 A 713 PHE ARG GLN GLY THR GLU VAL THR PRO GLU LEU LEU ALA SEQRES 50 A 713 ALA VAL LYS ALA THR VAL ARG LYS VAL ILE GLY PRO LEU SEQRES 51 A 713 ALA THR PRO ASP VAL MET GLN VAL ALA ARG VAL GLY LEU SEQRES 52 A 713 PRO LYS THR ARG SER GLY LYS ILE VAL ARG ARG ILE LEU SEQRES 53 A 713 ARG LYS VAL SER ALA GLY GLN TYR THR GLU LEU GLY ASP SEQRES 54 A 713 THR SER THR LEU ALA ASN PRO ASP VAL VAL GLU ASP LEU SEQRES 55 A 713 ILE ALA GLU HIS GLN ARG LEU CYS SER GLN ASN HET AMP A 801 23 HET ACT A 802 4 HET COA A 803 31 HETNAM AMP ADENOSINE MONOPHOSPHATE HETNAM ACT ACETATE ION HETNAM COA COENZYME A FORMUL 2 AMP C10 H14 N5 O7 P FORMUL 3 ACT C2 H3 O2 1- FORMUL 4 COA C21 H36 N7 O16 P3 S FORMUL 5 HOH *462(H2 O) HELIX 1 AA1 THR A 47 SER A 54 1 8 HELIX 2 AA2 HIS A 59 HIS A 73 1 15 HELIX 3 AA3 HIS A 73 PHE A 86 1 14 HELIX 4 AA4 ASP A 104 GLY A 108 5 5 HELIX 5 AA5 ASN A 121 LEU A 127 1 7 HELIX 6 AA6 ASP A 128 LEU A 131 5 4 HELIX 7 AA7 TYR A 155 GLN A 172 1 18 HELIX 8 AA8 ILE A 188 GLY A 202 1 15 HELIX 9 AA9 SER A 213 GLN A 225 1 13 HELIX 10 AB1 LEU A 244 GLU A 258 1 15 HELIX 11 AB2 TYR A 285 LEU A 292 1 8 HELIX 12 AB3 THR A 293 GLU A 298 5 6 HELIX 13 AB4 THR A 330 PHE A 345 1 16 HELIX 14 AB5 TRP A 361 VAL A 368 1 8 HELIX 15 AB6 VAL A 369 HIS A 375 1 7 HELIX 16 AB7 SER A 392 LYS A 402 1 11 HELIX 17 AB8 ALA A 409 GLY A 420 1 12 HELIX 18 AB9 ASP A 421 VAL A 426 1 6 HELIX 19 AC1 ASN A 443 VAL A 453 1 11 HELIX 20 AC2 GLN A 467 GLY A 471 5 5 HELIX 21 AC3 ASP A 533 PHE A 542 1 10 HELIX 22 AC4 GLY A 580 THR A 590 1 11 HELIX 23 AC5 THR A 624 ILE A 639 1 16 HELIX 24 AC6 GLY A 640 THR A 644 5 5 HELIX 25 AC7 VAL A 664 ALA A 673 1 10 HELIX 26 AC8 GLN A 675 LEU A 679 5 5 HELIX 27 AC9 ASP A 689 CYS A 702 1 14 SHEET 1 AA1 2 LYS A 99 ASN A 102 0 SHEET 2 AA1 2 PHE A 111 TRP A 114 -1 O PHE A 111 N ASN A 102 SHEET 1 AA2 2 VAL A 119 THR A 120 0 SHEET 2 AA2 2 MET A 305 ASP A 306 -1 O MET A 305 N THR A 120 SHEET 1 AA3 7 THR A 150 THR A 154 0 SHEET 2 AA3 7 VAL A 138 GLU A 143 -1 N PHE A 140 O VAL A 153 SHEET 3 AA3 7 THR A 378 PHE A 382 1 O SER A 379 N TYR A 141 SHEET 4 AA3 7 VAL A 352 CYS A 355 1 N TYR A 353 O THR A 378 SHEET 5 AA3 7 ILE A 405 THR A 408 1 O TYR A 407 N PHE A 354 SHEET 6 AA3 7 VAL A 434 SER A 437 1 O GLY A 436 N LEU A 406 SHEET 7 AA3 7 ASP A 460 ASP A 463 1 O SER A 462 N LEU A 435 SHEET 1 AA4 8 ASP A 282 TRP A 284 0 SHEET 2 AA4 8 ALA A 263 ALA A 267 1 N VAL A 266 O THR A 283 SHEET 3 AA4 8 LEU A 228 ALA A 232 1 N THR A 231 O LEU A 265 SHEET 4 AA4 8 ARG A 180 TYR A 184 1 N GLY A 182 O ILE A 230 SHEET 5 AA4 8 VAL A 204 VAL A 207 1 O VAL A 204 N VAL A 181 SHEET 6 AA4 8 VAL A 310 THR A 316 1 O LEU A 313 N ILE A 205 SHEET 7 AA4 8 LYS A 324 THR A 329 -1 O LYS A 324 N THR A 316 SHEET 8 AA4 8 THR A 529 ILE A 530 -1 O THR A 529 N VAL A 327 SHEET 1 AA5 2 ALA A 234 ARG A 237 0 SHEET 2 AA5 2 LYS A 240 PRO A 243 -1 O ILE A 242 N SER A 235 SHEET 1 AA6 5 GLU A 508 LYS A 509 0 SHEET 2 AA6 5 PRO A 498 LEU A 501 -1 N ILE A 500 O LYS A 509 SHEET 3 AA6 5 ALA A 513 ILE A 519 -1 O LEU A 516 N LEU A 501 SHEET 4 AA6 5 TYR A 548 ARG A 556 -1 O ARG A 556 N ALA A 513 SHEET 5 AA6 5 TYR A 562 ARG A 567 -1 O TRP A 563 N ARG A 555 SHEET 1 AA7 2 LEU A 572 VAL A 574 0 SHEET 2 AA7 2 HIS A 577 ILE A 579 -1 O HIS A 577 N VAL A 574 SHEET 1 AA8 3 VAL A 594 HIS A 604 0 SHEET 2 AA8 3 GLY A 608 PHE A 617 -1 O THR A 616 N VAL A 595 SHEET 3 AA8 3 VAL A 647 VAL A 650 1 O GLN A 649 N VAL A 613 CISPEP 1 LEU A 131 PRO A 132 0 6.67 CISPEP 2 TYR A 388 PRO A 389 0 2.93 CRYST1 59.017 69.383 151.619 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016944 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014413 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006595 0.00000