HEADER RNA/IMMUNE SYSTEM 13-APR-23 8SH5 TITLE CRYSTAL STRUCTURE OF 3'CAP-INDEPENDENT TRANSLATION ENHANCERS (CITE) TITLE 2 FROM PEA ENATION MOSAIC VIRUS RNA 2 (PEMV2) WITH FAB BL3-6K170A COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAB BL3-6K170A HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: FAB BL3-6K170A LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: RNA (88-MER); COMPND 11 CHAIN: R; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 9 ORGANISM_COMMON: MOUSE; SOURCE 10 ORGANISM_TAXID: 10090; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: PEA ENATION MOSAIC VIRUS 2; SOURCE 16 ORGANISM_TAXID: 193120 KEYWDS CITE, PEMV2, PTE, RNA, RNA-IMMUNE SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.LEWICKA,C.ROMAN,P.A.RICE,J.A.PICCIRILLI REVDAT 3 20-SEP-23 8SH5 1 JRNL REVDAT 2 30-AUG-23 8SH5 1 REMARK REVDAT 1 16-AUG-23 8SH5 0 JRNL AUTH A.LEWICKA,C.ROMAN,S.JONES,M.DISARE,P.A.RICE,J.A.PICCIRILLI JRNL TITL CRYSTAL STRUCTURE OF A CAP-INDEPENDENT TRANSLATION ENHANCER JRNL TITL 2 RNA. JRNL REF NUCLEIC ACIDS RES. V. 51 8891 2023 JRNL REFN ESSN 1362-4962 JRNL PMID 37548413 JRNL DOI 10.1093/NAR/GKAD649 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.LEWICKA,C.ROMAN,S.JONES,P.A.RICE,J.A.PICCIRILLI REMARK 1 TITL CRYSTAL STRUCTURE OF THE CAP-INDEPENDENT TRANSLATION REMARK 1 TITL 2 ENHANCER PEMV2 PTE REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 59.42 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 17639 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.255 REMARK 3 R VALUE (WORKING SET) : 0.251 REMARK 3 FREE R VALUE : 0.297 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1600 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 59.4200 - 6.1100 0.96 1487 155 0.1871 0.2233 REMARK 3 2 6.1100 - 4.8600 0.98 1473 152 0.2066 0.2463 REMARK 3 3 4.8500 - 4.2400 0.98 1481 145 0.1998 0.2296 REMARK 3 4 4.2400 - 3.8500 0.97 1439 144 0.2343 0.2950 REMARK 3 5 3.8500 - 3.5800 0.97 1472 144 0.2694 0.3327 REMARK 3 6 3.5800 - 3.3700 0.98 1440 142 0.2744 0.3267 REMARK 3 7 3.3700 - 3.2000 0.98 1477 146 0.3138 0.3795 REMARK 3 8 3.2000 - 3.0600 0.98 1466 141 0.3538 0.4344 REMARK 3 9 3.0600 - 2.9400 0.97 1435 146 0.3686 0.4032 REMARK 3 10 2.9400 - 2.8400 0.97 1443 141 0.4225 0.4192 REMARK 3 11 2.8400 - 2.7500 0.97 1426 144 0.4846 0.5907 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.392 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 41.223 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 61.73 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 97.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5497 REMARK 3 ANGLE : 0.578 7890 REMARK 3 CHIRALITY : 0.037 957 REMARK 3 PLANARITY : 0.005 678 REMARK 3 DIHEDRAL : 12.223 2263 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN H AND RESID 4:228 REMARK 3 ORIGIN FOR THE GROUP (A): 13.2510 -10.1621 59.0588 REMARK 3 T TENSOR REMARK 3 T11: 0.5335 T22: 0.7071 REMARK 3 T33: 0.5239 T12: -0.0061 REMARK 3 T13: 0.0782 T23: -0.1354 REMARK 3 L TENSOR REMARK 3 L11: 4.5496 L22: 1.0681 REMARK 3 L33: 3.5727 L12: -0.2833 REMARK 3 L13: 2.6305 L23: -0.4086 REMARK 3 S TENSOR REMARK 3 S11: -0.0250 S12: -0.2849 S13: 0.3481 REMARK 3 S21: 0.2030 S22: -0.0901 S23: 0.0593 REMARK 3 S31: -0.0927 S32: -0.1212 S33: 0.1205 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN L AND RESID 1:215 REMARK 3 ORIGIN FOR THE GROUP (A): 26.1042 -18.4568 49.9547 REMARK 3 T TENSOR REMARK 3 T11: 0.6097 T22: 0.8628 REMARK 3 T33: 0.6349 T12: -0.0146 REMARK 3 T13: 0.0764 T23: -0.0807 REMARK 3 L TENSOR REMARK 3 L11: 4.2207 L22: 0.4689 REMARK 3 L33: 4.3692 L12: -0.6718 REMARK 3 L13: 2.2509 L23: -0.3417 REMARK 3 S TENSOR REMARK 3 S11: 0.1237 S12: 0.7620 S13: -0.3291 REMARK 3 S21: -0.1997 S22: -0.0671 S23: -0.1897 REMARK 3 S31: 0.0745 S32: 1.0134 S33: -0.0711 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN R AND RESID 1:88 REMARK 3 ORIGIN FOR THE GROUP (A): -33.9328 -14.5720 15.4294 REMARK 3 T TENSOR REMARK 3 T11: 0.6234 T22: 1.2058 REMARK 3 T33: 0.7471 T12: 0.0480 REMARK 3 T13: -0.0652 T23: -0.0086 REMARK 3 L TENSOR REMARK 3 L11: 7.0210 L22: 0.6501 REMARK 3 L33: 0.8352 L12: 1.0548 REMARK 3 L13: 1.4940 L23: 0.1713 REMARK 3 S TENSOR REMARK 3 S11: -0.0727 S12: -0.1133 S13: 0.3282 REMARK 3 S21: -0.0357 S22: -0.0101 S23: 0.0933 REMARK 3 S31: -0.1169 S32: -0.3567 S33: 0.1053 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8SH5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-APR-23. REMARK 100 THE DEPOSITION ID IS D_1000273717. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-OCT-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979180 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18060 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 59.420 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.19140 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.57170 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5 MM MGCL2, 50 MM HEPES PH 7.0, 25% REMARK 280 PEG 550, 2% BENZAMIDINE HYDROCHLORIDE, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.73000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L, R REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU H 1 REMARK 465 ILE H 2 REMARK 465 SER H 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GDP R 1 C3' - O3' - P ANGL. DEV. = -13.0 DEGREES REMARK 500 G R 2 O3' - P - OP2 ANGL. DEV. = 7.2 DEGREES REMARK 500 C R 33 C2 - N1 - C1' ANGL. DEV. = -7.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL H 51 -63.13 -99.22 REMARK 500 SER H 108 -162.52 -117.70 REMARK 500 ASP H 156 69.32 63.34 REMARK 500 THR H 203 -52.18 -122.84 REMARK 500 SER L 31 -135.66 56.97 REMARK 500 ALA L 33 50.36 -93.66 REMARK 500 ALA L 52 -54.18 65.03 REMARK 500 ASN L 139 77.88 55.44 REMARK 500 LYS L 191 -70.64 -121.97 REMARK 500 REMARK 500 REMARK: NULL DBREF 8SH5 H 1 228 PDB 8SH5 8SH5 1 228 DBREF 8SH5 L 1 215 PDB 8SH5 8SH5 1 215 DBREF 8SH5 R 1 88 GB 51979311 AY714213.1 3820 3907 SEQADV 8SH5 A R 39 GB 51979311 G 3858 CONFLICT SEQADV 8SH5 A R 40 GB 51979311 U 3859 CONFLICT SEQADV 8SH5 A R 41 GB 51979311 U 3860 CONFLICT SEQADV 8SH5 C R 42 GB 51979311 A 3861 CONFLICT SEQADV 8SH5 A R 43 GB 51979311 U 3862 CONFLICT SEQADV 8SH5 U R 76 GB 51979311 C 3895 CONFLICT SEQADV 8SH5 C R 79 GB 51979311 A 3898 CONFLICT SEQRES 1 H 228 GLU ILE SER GLU VAL GLN LEU VAL GLU SER GLY GLY GLY SEQRES 2 H 228 LEU VAL GLN PRO GLY GLY SER LEU ARG LEU SER CYS ALA SEQRES 3 H 228 ALA SER GLY PHE TYR ILE SER TYR SER SER ILE HIS TRP SEQRES 4 H 228 VAL ARG GLN ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA SEQRES 5 H 228 SER ILE SER PRO TYR SER GLY SER THR TYR TYR ALA ASP SEQRES 6 H 228 SER VAL LYS GLY ARG PHE THR ILE SER ALA ASP THR SER SEQRES 7 H 228 LYS ASN THR ALA TYR LEU GLN MET ASN SER LEU ARG ALA SEQRES 8 H 228 GLU ASP THR ALA VAL TYR TYR CYS ALA ARG GLN GLY TYR SEQRES 9 H 228 ARG ARG ARG SER GLY ARG GLY PHE ASP TYR TRP GLY GLN SEQRES 10 H 228 GLY THR LEU VAL THR VAL SER SER ALA SER THR LYS GLY SEQRES 11 H 228 PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SEQRES 12 H 228 SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP SEQRES 13 H 228 TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY SEQRES 14 H 228 ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU SEQRES 15 H 228 GLN SER SER GLY LEU TYR SER LEU SER SER VAL VAL THR SEQRES 16 H 228 VAL PRO SER SER SER LEU GLY THR GLN THR TYR ILE CYS SEQRES 17 H 228 ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS SEQRES 18 H 228 LYS VAL GLU PRO LYS SER CYS SEQRES 1 L 215 SER ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER SEQRES 2 L 215 ALA SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SEQRES 3 L 215 SER GLN SER VAL SER SER ALA VAL ALA TRP TYR GLN GLN SEQRES 4 L 215 LYS PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR SER ALA SEQRES 5 L 215 SER SER LEU TYR SER GLY VAL PRO SER ARG PHE SER GLY SEQRES 6 L 215 SER ARG SER GLY THR ASP PHE THR LEU THR ILE SER SER SEQRES 7 L 215 LEU GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN SEQRES 8 L 215 SER TYR SER PHE PRO SER THR PHE GLY GLN GLY THR LYS SEQRES 9 L 215 VAL GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 L 215 ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR SEQRES 11 L 215 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 L 215 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 L 215 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 L 215 ALA ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 L 215 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 L 215 GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SEQRES 17 L 215 SER PHE ASN ARG GLY GLU CYS SEQRES 1 R 88 GDP G U A G A A C A C G U G SEQRES 2 R 88 G G A U A G G G G A U G A SEQRES 3 R 88 C C U U G U C G A C C G A SEQRES 4 R 88 A A C A C G G U C C C C U SEQRES 5 R 88 G C U C C U U C G A G C U SEQRES 6 R 88 G G C A A G G C G C U C A SEQRES 7 R 88 C A G G U U C U A C MODRES 8SH5 GDP R 1 G MODIFIED RESIDUE HET GDP R 1 28 HETNAM GDP GUANOSINE-5'-DIPHOSPHATE FORMUL 3 GDP C10 H15 N5 O11 P2 FORMUL 4 HOH *25(H2 O) HELIX 1 AA1 TYR H 31 SER H 35 5 5 HELIX 2 AA2 ARG H 90 THR H 94 5 5 HELIX 3 AA3 SER H 199 LEU H 201 5 3 HELIX 4 AA4 SER L 122 GLY L 129 1 8 HELIX 5 AA5 LYS L 184 HIS L 190 1 7 SHEET 1 AA1 4 GLN H 6 SER H 10 0 SHEET 2 AA1 4 LEU H 21 SER H 28 -1 O ALA H 26 N VAL H 8 SHEET 3 AA1 4 THR H 81 MET H 86 -1 O MET H 86 N LEU H 21 SHEET 4 AA1 4 PHE H 71 ASP H 76 -1 N THR H 72 O GLN H 85 SHEET 1 AA2 6 LEU H 14 VAL H 15 0 SHEET 2 AA2 6 THR H 119 VAL H 123 1 O THR H 122 N VAL H 15 SHEET 3 AA2 6 ALA H 95 GLN H 102 -1 N TYR H 97 O THR H 119 SHEET 4 AA2 6 SER H 36 GLN H 42 -1 N SER H 36 O GLN H 102 SHEET 5 AA2 6 LEU H 48 ILE H 54 -1 O GLU H 49 N ARG H 41 SHEET 6 AA2 6 THR H 61 TYR H 63 -1 O TYR H 62 N SER H 53 SHEET 1 AA3 4 LEU H 14 VAL H 15 0 SHEET 2 AA3 4 THR H 119 VAL H 123 1 O THR H 122 N VAL H 15 SHEET 3 AA3 4 ALA H 95 GLN H 102 -1 N TYR H 97 O THR H 119 SHEET 4 AA3 4 PHE H 112 TRP H 115 -1 O TYR H 114 N ARG H 101 SHEET 1 AA4 4 SER H 132 LEU H 136 0 SHEET 2 AA4 4 THR H 147 TYR H 157 -1 O LYS H 155 N SER H 132 SHEET 3 AA4 4 TYR H 188 PRO H 197 -1 O TYR H 188 N TYR H 157 SHEET 4 AA4 4 VAL H 175 THR H 177 -1 N HIS H 176 O VAL H 193 SHEET 1 AA5 4 SER H 132 LEU H 136 0 SHEET 2 AA5 4 THR H 147 TYR H 157 -1 O LYS H 155 N SER H 132 SHEET 3 AA5 4 TYR H 188 PRO H 197 -1 O TYR H 188 N TYR H 157 SHEET 4 AA5 4 VAL H 181 LEU H 182 -1 N VAL H 181 O SER H 189 SHEET 1 AA6 3 THR H 163 TRP H 166 0 SHEET 2 AA6 3 TYR H 206 HIS H 212 -1 O ASN H 209 N SER H 165 SHEET 3 AA6 3 THR H 217 VAL H 223 -1 O VAL H 219 N VAL H 210 SHEET 1 AA7 4 MET L 5 SER L 8 0 SHEET 2 AA7 4 VAL L 20 ALA L 26 -1 O ARG L 25 N THR L 6 SHEET 3 AA7 4 ASP L 71 ILE L 76 -1 O LEU L 74 N ILE L 22 SHEET 4 AA7 4 PHE L 63 SER L 68 -1 N SER L 68 O ASP L 71 SHEET 1 AA8 6 SER L 11 SER L 15 0 SHEET 2 AA8 6 THR L 103 LYS L 108 1 O LYS L 108 N ALA L 14 SHEET 3 AA8 6 ALA L 85 GLN L 91 -1 N TYR L 87 O THR L 103 SHEET 4 AA8 6 VAL L 34 GLN L 39 -1 N GLN L 39 O THR L 86 SHEET 5 AA8 6 LYS L 46 TYR L 50 -1 O LYS L 46 N GLN L 38 SHEET 6 AA8 6 SER L 54 LEU L 55 -1 O SER L 54 N TYR L 50 SHEET 1 AA9 4 SER L 115 PHE L 119 0 SHEET 2 AA9 4 THR L 130 PHE L 140 -1 O VAL L 134 N PHE L 119 SHEET 3 AA9 4 TYR L 174 SER L 183 -1 O LEU L 176 N LEU L 137 SHEET 4 AA9 4 SER L 160 VAL L 164 -1 N SER L 163 O SER L 177 SHEET 1 AB1 3 LYS L 146 VAL L 151 0 SHEET 2 AB1 3 VAL L 192 THR L 198 -1 O GLU L 196 N GLN L 148 SHEET 3 AB1 3 VAL L 206 ASN L 211 -1 O VAL L 206 N VAL L 197 SSBOND 1 CYS H 25 CYS H 99 1555 1555 2.03 SSBOND 2 CYS H 152 CYS H 208 1555 1555 2.03 SSBOND 3 CYS H 228 CYS L 215 1555 1555 2.03 SSBOND 4 CYS L 24 CYS L 89 1555 1555 2.03 SSBOND 5 CYS L 135 CYS L 195 1555 1555 2.03 LINK O3' GDP R 1 P G R 2 1555 1555 1.56 CISPEP 1 PHE H 158 PRO H 159 0 -1.41 CISPEP 2 GLU H 160 PRO H 161 0 -6.38 CISPEP 3 SER L 8 PRO L 9 0 -4.74 CISPEP 4 PHE L 95 PRO L 96 0 1.76 CISPEP 5 TYR L 141 PRO L 142 0 2.41 CRYST1 63.346 65.460 89.817 90.00 110.29 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015786 0.000000 0.005836 0.00000 SCALE2 0.000000 0.015277 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011870 0.00000