HEADER IMMUNE SYSTEM 16-APR-23 8SIQ TITLE CRYSTAL STRUCTURE OF SARS-COV-2 SPIKE RECEPTOR-BINDING DOMAIN IN TITLE 2 COMPLEX WITH BROADLY NEUTRALIZING ANTIBODIES CC25.36 AND CV38-142 FAB COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE PROTEIN S1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RECEPTOR BINDING DOMAIN, UNP RESIDUES 333-530; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CC25.36 FAB HEAVY CHAIN; COMPND 8 CHAIN: H; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: CC25.36 FAB LIGHT CHAIN; COMPND 12 CHAIN: L; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 4; COMPND 15 MOLECULE: CV38-142 FAB HEAVY CHAIN; COMPND 16 CHAIN: M; COMPND 17 ENGINEERED: YES; COMPND 18 MOL_ID: 5; COMPND 19 MOLECULE: CV38-142 FAB LIGHT CHAIN; COMPND 20 CHAIN: N; COMPND 21 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_TAXID: 2697049; SOURCE 5 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 6 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 13 EXPRESSION_SYSTEM_COMMON: MOUSE; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_COMMON: HUMAN; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 20 EXPRESSION_SYSTEM_COMMON: MOUSE; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 22 MOL_ID: 4; SOURCE 23 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 24 ORGANISM_COMMON: HUMAN; SOURCE 25 ORGANISM_TAXID: 9606; SOURCE 26 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 27 EXPRESSION_SYSTEM_COMMON: MOUSE; SOURCE 28 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 29 MOL_ID: 5; SOURCE 30 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 31 ORGANISM_COMMON: HUMAN; SOURCE 32 ORGANISM_TAXID: 9606; SOURCE 33 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 34 EXPRESSION_SYSTEM_COMMON: MOUSE; SOURCE 35 EXPRESSION_SYSTEM_TAXID: 10090 KEYWDS BNAB, SARS-COV-2, BROADLY NEUTRALIZING ANTIBODY, SPIKE, RBD, IMMUNE KEYWDS 2 SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR H.LIU,I.A.WILSON REVDAT 1 13-MAR-24 8SIQ 0 JRNL AUTH G.SONG,M.YUAN,H.LIU,T.CAPOZZOLA,R.LIN,J.TORRES,W.HE, JRNL AUTH 2 R.MUSHARRAFIEH,K.DUEKER,P.ZHOU,S.CALLAGHAN,N.MISHRA,P.YONG, JRNL AUTH 3 F.ANZANELLO,G.AVILLION,A.VO,X.LI,M.MAKHDOOMI,Z.FENG,X.ZHU, JRNL AUTH 4 L.PENG,D.NEMAZEE,Y.SAFONOVA,B.BRINEY,A.WARD,D.BURTON, JRNL AUTH 5 I.WILSON,R.ANDRABI JRNL TITL BROADLY NEUTRALIZING ANTIBODIES TARGETING A CONSERVED SILENT JRNL TITL 2 FACE OF SPIKE RBD RESIST EXTREME SARS-COV-2 ANTIGENIC DRIFT JRNL REF BIORXIV 2023 JRNL REFN ISSN 2692-8205 JRNL DOI 10.1101/2023.04.26.538488 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.19.2_4158: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.52 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 77.8 REMARK 3 NUMBER OF REFLECTIONS : 34284 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.249 REMARK 3 R VALUE (WORKING SET) : 0.247 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.770 REMARK 3 FREE R VALUE TEST SET COUNT : 1635 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.5200 - 5.7200 0.86 3207 173 0.2294 0.2650 REMARK 3 2 5.7200 - 4.5400 0.88 3139 152 0.1979 0.2185 REMARK 3 3 4.5400 - 3.9700 0.86 3041 158 0.1957 0.2093 REMARK 3 4 3.9700 - 3.6000 0.87 3029 166 0.2289 0.3016 REMARK 3 5 3.6000 - 3.3500 0.87 2999 161 0.2523 0.2904 REMARK 3 6 3.3500 - 3.1500 0.86 3008 138 0.2857 0.3082 REMARK 3 7 3.1500 - 2.9900 0.87 3018 139 0.3001 0.3536 REMARK 3 8 2.9900 - 2.8600 0.86 2966 143 0.2976 0.3543 REMARK 3 9 2.8600 - 2.7500 0.78 2690 145 0.3015 0.3901 REMARK 3 10 2.7500 - 2.6600 0.69 2409 104 0.3286 0.3902 REMARK 3 11 2.6600 - 2.5700 0.53 1831 88 0.3542 0.4732 REMARK 3 12 2.5700 - 2.5000 0.38 1312 68 0.4053 0.4102 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 8162 REMARK 3 ANGLE : 0.763 11134 REMARK 3 CHIRALITY : 0.045 1245 REMARK 3 PLANARITY : 0.006 1433 REMARK 3 DIHEDRAL : 15.708 1174 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -3.1396 -12.5512 35.8211 REMARK 3 T TENSOR REMARK 3 T11: 0.1493 T22: 0.1452 REMARK 3 T33: 0.1757 T12: -0.0398 REMARK 3 T13: -0.0110 T23: 0.0085 REMARK 3 L TENSOR REMARK 3 L11: 0.9276 L22: 0.2381 REMARK 3 L33: 0.6039 L12: -0.1415 REMARK 3 L13: -0.5146 L23: 0.1801 REMARK 3 S TENSOR REMARK 3 S11: -0.0644 S12: -0.0082 S13: -0.1423 REMARK 3 S21: 0.0957 S22: 0.0287 S23: -0.0449 REMARK 3 S31: 0.0593 S32: 0.0395 S33: 0.0153 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8SIQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-APR-23. REMARK 100 THE DEPOSITION ID IS D_1000273792. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-NOV-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38811 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 87.8 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.15700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 1.11900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% (W/V) PEG-3350, 0.2 M DI-AMMONIUM REMARK 280 CITRATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 273K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.19950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 133.22250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.51750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 133.22250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.19950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.51750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, H, L, M, N, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 333 REMARK 465 SER A 530 REMARK 465 GLY A 531 REMARK 465 HIS A 532 REMARK 465 HIS A 533 REMARK 465 HIS A 534 REMARK 465 HIS A 535 REMARK 465 HIS A 536 REMARK 465 HIS A 537 REMARK 465 SER H 128 REMARK 465 LYS H 129 REMARK 465 SER H 130 REMARK 465 THR H 131 REMARK 465 SER H 132 REMARK 465 GLY H 133 REMARK 465 GLY H 134 REMARK 465 LYS H 214 REMARK 465 SER H 215 REMARK 465 CYS H 216 REMARK 465 LYS L 157 REMARK 465 ALA L 158 REMARK 465 PRO L 209 REMARK 465 THR L 210 REMARK 465 GLU L 211 REMARK 465 CYS L 212 REMARK 465 SER L 213 REMARK 465 SER M 146 REMARK 465 THR M 147 REMARK 465 SER M 148 REMARK 465 GLY M 149 REMARK 465 SER N 215 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 386 CG CD CE NZ REMARK 470 LEU A 387 CG CD1 CD2 REMARK 470 ASN A 388 CG OD1 ND2 REMARK 470 VAL A 483 CG1 CG2 REMARK 470 LEU A 518 CG CD1 CD2 REMARK 470 HIS A 519 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 528 CG CD CE NZ REMARK 470 SER H 120 OG REMARK 470 LEU H 124 CG CD1 CD2 REMARK 470 SER H 127 OG REMARK 470 SER H 156 OG REMARK 470 LEU H 159 CG CD1 CD2 REMARK 470 THR H 160 OG1 CG2 REMARK 470 SER H 161 OG REMARK 470 VAL H 163 CG1 CG2 REMARK 470 THR H 165 OG1 CG2 REMARK 470 VAL H 181 CG1 CG2 REMARK 470 VAL H 182 CG1 CG2 REMARK 470 THR H 183 OG1 CG2 REMARK 470 VAL H 184 CG1 CG2 REMARK 470 SER H 186 OG REMARK 470 SER H 187 OG REMARK 470 SER H 188 OG REMARK 470 LEU H 189 CG CD1 CD2 REMARK 470 THR H 191 OG1 CG2 REMARK 470 GLN H 192 CG CD OE1 NE2 REMARK 470 THR H 193 OG1 CG2 REMARK 470 ILE H 195 CG1 CG2 CD1 REMARK 470 ASN H 197 CG OD1 ND2 REMARK 470 VAL H 198 CG1 CG2 REMARK 470 LYS H 206 CG CD CE NZ REMARK 470 VAL H 207 CG1 CG2 REMARK 470 ARG H 210 CG CD NE CZ NH1 NH2 REMARK 470 GLU H 212 CG CD OE1 OE2 REMARK 470 GLN L 1 CG CD OE1 NE2 REMARK 470 GLU L 124 CG CD OE1 OE2 REMARK 470 LYS L 130 CG CD CE NZ REMARK 470 VAL L 147 CG1 CG2 REMARK 470 LYS L 150 CG CD CE NZ REMARK 470 SER L 153 OG REMARK 470 VAL L 156 CG1 CG2 REMARK 470 LYS L 167 CG CD CE NZ REMARK 470 ASN L 171 CG OD1 ND2 REMARK 470 LYS L 172 CG CD CE NZ REMARK 470 SER L 180 OG REMARK 470 LEU L 181 CG CD1 CD2 REMARK 470 THR L 182 OG1 CG2 REMARK 470 GLU L 184 CG CD OE1 OE2 REMARK 470 GLN L 185 CG CD OE1 NE2 REMARK 470 LYS L 187 CG CD CE NZ REMARK 470 HIS L 189 CG ND1 CD2 CE1 NE2 REMARK 470 ARG L 190 CG CD NE CZ NH1 NH2 REMARK 470 SER L 191 OG REMARK 470 TYR L 192 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER L 193 OG REMARK 470 GLN L 195 CG CD OE1 NE2 REMARK 470 GLU L 199 CG CD OE1 OE2 REMARK 470 VAL L 207 CG1 CG2 REMARK 470 LYS M 230 CG CD CE NZ REMARK 470 LYS N 126 CG CD CE NZ REMARK 470 LYS N 169 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N ALA L 14 OE1 GLN L 17 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG SER N 60 OD2 ASP N 185 3455 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO L 142 CG PRO L 142 CD -0.289 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO L 142 N - CD - CG ANGL. DEV. = -11.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN L 27B -74.55 -99.32 REMARK 500 ASN L 51 -23.30 71.04 REMARK 500 SER L 52 -22.77 -143.85 REMARK 500 ASN L 171 -1.62 78.92 REMARK 500 SER M 100 -121.91 57.70 REMARK 500 SER N 30 -129.63 60.47 REMARK 500 ALA N 51 -16.06 71.27 REMARK 500 REMARK 500 REMARK: NULL DBREF 8SIQ A 333 530 UNP P0DTC2 SPIKE_SARS2 333 530 DBREF 8SIQ H 1 216 PDB 8SIQ 8SIQ 1 216 DBREF 8SIQ L 1 213 PDB 8SIQ 8SIQ 1 213 DBREF 8SIQ M 1 232 PDB 8SIQ 8SIQ 1 232 DBREF 8SIQ N 1 215 PDB 8SIQ 8SIQ 1 215 SEQADV 8SIQ GLY A 531 UNP P0DTC2 EXPRESSION TAG SEQADV 8SIQ HIS A 532 UNP P0DTC2 EXPRESSION TAG SEQADV 8SIQ HIS A 533 UNP P0DTC2 EXPRESSION TAG SEQADV 8SIQ HIS A 534 UNP P0DTC2 EXPRESSION TAG SEQADV 8SIQ HIS A 535 UNP P0DTC2 EXPRESSION TAG SEQADV 8SIQ HIS A 536 UNP P0DTC2 EXPRESSION TAG SEQADV 8SIQ HIS A 537 UNP P0DTC2 EXPRESSION TAG SEQRES 1 A 205 THR ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN ALA THR SEQRES 2 A 205 ARG PHE ALA SER VAL TYR ALA TRP ASN ARG LYS ARG ILE SEQRES 3 A 205 SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN SER SEQRES 4 A 205 ALA SER PHE SER THR PHE LYS CYS TYR GLY VAL SER PRO SEQRES 5 A 205 THR LYS LEU ASN ASP LEU CYS PHE THR ASN VAL TYR ALA SEQRES 6 A 205 ASP SER PHE VAL ILE ARG GLY ASP GLU VAL ARG GLN ILE SEQRES 7 A 205 ALA PRO GLY GLN THR GLY LYS ILE ALA ASP TYR ASN TYR SEQRES 8 A 205 LYS LEU PRO ASP ASP PHE THR GLY CYS VAL ILE ALA TRP SEQRES 9 A 205 ASN SER ASN ASN LEU ASP SER LYS VAL GLY GLY ASN TYR SEQRES 10 A 205 ASN TYR LEU TYR ARG LEU PHE ARG LYS SER ASN LEU LYS SEQRES 11 A 205 PRO PHE GLU ARG ASP ILE SER THR GLU ILE TYR GLN ALA SEQRES 12 A 205 GLY SER THR PRO CYS ASN GLY VAL GLU GLY PHE ASN CYS SEQRES 13 A 205 TYR PHE PRO LEU GLN SER TYR GLY PHE GLN PRO THR ASN SEQRES 14 A 205 GLY VAL GLY TYR GLN PRO TYR ARG VAL VAL VAL LEU SER SEQRES 15 A 205 PHE GLU LEU LEU HIS ALA PRO ALA THR VAL CYS GLY PRO SEQRES 16 A 205 LYS LYS SER GLY HIS HIS HIS HIS HIS HIS SEQRES 1 H 230 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 H 230 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 230 PHE THR PHE SER SER ARG ASN MET ASN TRP VAL ARG GLN SEQRES 4 H 230 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER TYR ILE SER SEQRES 5 H 230 SER SER GLY SER ILE TYR TYR ALA ASP SER VAL LYS GLY SEQRES 6 H 230 ARG PHE SER ILE SER ARG ASP ASN VAL LYS ASN SER LEU SEQRES 7 H 230 TYR LEU GLN MET ASN SER LEU ARG ASP GLU ASP THR ALA SEQRES 8 H 230 VAL TYR TYR CYS ALA ARG GLY VAL VAL GLY TYR TYR ASP SEQRES 9 H 230 MET LEU THR GLY PRO PRO ASP ASN TRP LEU ASP ALA TRP SEQRES 10 H 230 GLY GLN GLY THR LEU VAL THR VAL SER SER ALA SER THR SEQRES 11 H 230 LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SEQRES 12 H 230 SER THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL SEQRES 13 H 230 LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SEQRES 14 H 230 SER GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA SEQRES 15 H 230 VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL SEQRES 16 H 230 VAL THR VAL PRO SER SER SER LEU GLY THR GLN THR TYR SEQRES 17 H 230 ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL SEQRES 18 H 230 ASP LYS ARG VAL GLU PRO LYS SER CYS SEQRES 1 L 217 GLN SER VAL LEU THR GLN PRO PRO SER VAL SER GLY ALA SEQRES 2 L 217 PRO GLY GLN ARG VAL THR ILE SER CYS THR GLY SER SER SEQRES 3 L 217 SER ASN ILE GLY ALA GLY TYR ASP VAL HIS TRP TYR GLN SEQRES 4 L 217 GLN LEU PRO GLY THR ALA PRO LYS LEU LEU ILE TYR GLY SEQRES 5 L 217 ASN SER ASN ARG PRO SER GLY VAL PRO ASP ARG PHE SER SEQRES 6 L 217 GLY SER LYS SER GLY THR SER ALA SER LEU ALA ILE THR SEQRES 7 L 217 GLY LEU GLN ALA GLU ASP GLU ALA ASP TYR TYR CYS GLN SEQRES 8 L 217 SER TYR ASP SER SER LEU SER GLY TRP VAL PHE GLY GLY SEQRES 9 L 217 GLY THR LYS LEU THR VAL LEU GLY GLN PRO LYS ALA ALA SEQRES 10 L 217 PRO SER VAL THR LEU PHE PRO PRO SER SER GLU GLU LEU SEQRES 11 L 217 GLN ALA ASN LYS ALA THR LEU VAL CYS LEU ILE SER ASP SEQRES 12 L 217 PHE TYR PRO GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SEQRES 13 L 217 SER SER PRO VAL LYS ALA GLY VAL GLU THR THR THR PRO SEQRES 14 L 217 SER LYS GLN SER ASN ASN LYS TYR ALA ALA SER SER TYR SEQRES 15 L 217 LEU SER LEU THR PRO GLU GLN TRP LYS SER HIS ARG SER SEQRES 16 L 217 TYR SER CYS GLN VAL THR HIS GLU GLY SER THR VAL GLU SEQRES 17 L 217 LYS THR VAL ALA PRO THR GLU CYS SER SEQRES 1 M 226 GLU VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 M 226 PRO GLY GLU SER LEU LYS ILE SER CYS GLN GLY SER GLY SEQRES 3 M 226 TYR SER PHE THR SER TYR TRP ILE GLY TRP VAL ARG GLN SEQRES 4 M 226 MET PRO GLY LYS GLY LEU GLU TRP MET GLY ILE ILE TYR SEQRES 5 M 226 PRO GLY GLU SER ASP THR ARG TYR SER SER SER PHE GLN SEQRES 6 M 226 GLY HIS VAL THR ILE SER ALA ASP LYS SER ILE SER THR SEQRES 7 M 226 ALA TYR LEU GLN TRP SER SER LEU LYS ALA SER ASP THR SEQRES 8 M 226 ALA MET TYR TYR CYS ALA ARG ILE ARG GLY VAL TYR SER SEQRES 9 M 226 SER GLY TRP ILE GLY GLY ASP TYR TRP GLY GLN GLY THR SEQRES 10 M 226 LEU VAL THR VAL SER SER ALA SER THR LYS GLY PRO SER SEQRES 11 M 226 VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SER GLY SEQRES 12 M 226 GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE SEQRES 13 M 226 PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU SEQRES 14 M 226 THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SEQRES 15 M 226 SER GLY LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SEQRES 16 M 226 SER SER SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL SEQRES 17 M 226 ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS LYS VAL SEQRES 18 M 226 GLU PRO LYS SER CYS SEQRES 1 N 217 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 N 217 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 N 217 GLN SER ILE SER SER TYR LEU ASN TRP TYR GLN GLN LYS SEQRES 4 N 217 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR ALA ALA SER SEQRES 5 N 217 SER LEU GLN SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 N 217 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 N 217 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN SER SEQRES 8 N 217 TYR SER THR PRO ARG GLN TRP THR PHE GLY GLN GLY THR SEQRES 9 N 217 LYS VAL GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL SEQRES 10 N 217 PHE ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY SEQRES 11 N 217 THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO SEQRES 12 N 217 ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU SEQRES 13 N 217 GLN SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SEQRES 14 N 217 SER LYS ASP SER THR TYR SER LEU SER SER THR LEU THR SEQRES 15 N 217 LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA SEQRES 16 N 217 CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR SEQRES 17 N 217 LYS SER PHE ASN ARG GLY GLU CYS SER HET NAG B 1 14 HET NAG B 2 14 HET BMA B 3 11 HET FUC B 4 10 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 6 NAG 2(C8 H15 N O6) FORMUL 6 BMA C6 H12 O6 FORMUL 6 FUC C6 H12 O5 HELIX 1 AA1 PRO A 337 ASN A 343 1 7 HELIX 2 AA2 SER A 349 TRP A 353 5 5 HELIX 3 AA3 TYR A 365 SER A 371 1 7 HELIX 4 AA4 ASP A 405 ILE A 410 5 6 HELIX 5 AA5 GLY A 416 ASN A 422 1 7 HELIX 6 AA6 SER A 438 SER A 443 1 6 HELIX 7 AA7 GLY A 502 TYR A 505 5 4 HELIX 8 AA8 ASP H 61 LYS H 64 5 4 HELIX 9 AA9 ARG H 83 THR H 87 5 5 HELIX 10 AB1 SER H 156 ALA H 158 5 3 HELIX 11 AB2 PRO H 185 GLN H 192 1 8 HELIX 12 AB3 GLN L 79 GLU L 83 5 5 HELIX 13 AB4 SER L 122 ALA L 128 1 7 HELIX 14 AB5 LYS M 83 THR M 87 5 5 HELIX 15 AB6 SER M 172 ALA M 174 5 3 HELIX 16 AB7 SER M 203 GLN M 208 1 6 HELIX 17 AB8 GLN N 79 PHE N 83 5 5 HELIX 18 AB9 THR N 94 TRP N 96 5 5 HELIX 19 AC1 SER N 121 GLY N 128 1 8 HELIX 20 AC2 LYS N 183 HIS N 189 1 7 SHEET 1 AA1 6 ASN A 354 ILE A 358 0 SHEET 2 AA1 6 ASN A 394 ARG A 403 -1 O VAL A 395 N ILE A 358 SHEET 3 AA1 6 PRO A 507 GLU A 516 -1 O VAL A 510 N PHE A 400 SHEET 4 AA1 6 GLY A 431 ASN A 437 -1 N TRP A 436 O ARG A 509 SHEET 5 AA1 6 THR A 376 TYR A 380 -1 N TYR A 380 O GLY A 431 SHEET 6 AA1 6 TYR H 100 ASP H 100A-1 O TYR H 100 N CYS A 379 SHEET 1 AA2 3 CYS A 361 VAL A 362 0 SHEET 2 AA2 3 VAL A 524 CYS A 525 1 O CYS A 525 N CYS A 361 SHEET 3 AA2 3 CYS A 391 PHE A 392 -1 N PHE A 392 O VAL A 524 SHEET 1 AA3 2 LEU A 452 ARG A 454 0 SHEET 2 AA3 2 LEU A 492 SER A 494 -1 O GLN A 493 N TYR A 453 SHEET 1 AA4 2 TYR A 473 GLN A 474 0 SHEET 2 AA4 2 CYS A 488 TYR A 489 -1 O TYR A 489 N TYR A 473 SHEET 1 AA5 4 GLN H 3 SER H 7 0 SHEET 2 AA5 4 LEU H 18 SER H 25 -1 O SER H 25 N GLN H 3 SHEET 3 AA5 4 SER H 77 MET H 82 -1 O LEU H 78 N CYS H 22 SHEET 4 AA5 4 PHE H 67 ASP H 72 -1 N SER H 70 O TYR H 79 SHEET 1 AA6 6 LEU H 11 VAL H 12 0 SHEET 2 AA6 6 THR H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 AA6 6 ALA H 88 VAL H 97 -1 N ALA H 88 O VAL H 109 SHEET 4 AA6 6 ARG H 32 GLN H 39 -1 N VAL H 37 O TYR H 91 SHEET 5 AA6 6 LEU H 45 ILE H 51 -1 O ILE H 51 N MET H 34 SHEET 6 AA6 6 ILE H 57 TYR H 59 -1 O TYR H 58 N TYR H 50 SHEET 1 AA7 4 LEU H 11 VAL H 12 0 SHEET 2 AA7 4 THR H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 AA7 4 ALA H 88 VAL H 97 -1 N ALA H 88 O VAL H 109 SHEET 4 AA7 4 ALA H 102 TRP H 103 -1 O ALA H 102 N ARG H 94 SHEET 1 AA8 4 SER H 120 LEU H 124 0 SHEET 2 AA8 4 ALA H 136 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AA8 4 TYR H 176 VAL H 184 -1 O VAL H 182 N LEU H 138 SHEET 4 AA8 4 VAL H 163 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 AA9 4 SER H 120 LEU H 124 0 SHEET 2 AA9 4 ALA H 136 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AA9 4 TYR H 176 VAL H 184 -1 O VAL H 182 N LEU H 138 SHEET 4 AA9 4 VAL H 169 LEU H 170 -1 N VAL H 169 O SER H 177 SHEET 1 AB1 3 THR H 151 TRP H 154 0 SHEET 2 AB1 3 TYR H 194 HIS H 200 -1 O ASN H 197 N SER H 153 SHEET 3 AB1 3 THR H 205 VAL H 211 -1 O LYS H 209 N CYS H 196 SHEET 1 AB2 5 SER L 9 GLY L 13 0 SHEET 2 AB2 5 THR L 102 VAL L 106 1 O LYS L 103 N VAL L 11 SHEET 3 AB2 5 ALA L 84 ASP L 92 -1 N TYR L 86 O THR L 102 SHEET 4 AB2 5 HIS L 34 GLN L 38 -1 N HIS L 34 O GLN L 89 SHEET 5 AB2 5 LYS L 45 ILE L 48 -1 O LYS L 45 N GLN L 37 SHEET 1 AB3 4 SER L 9 GLY L 13 0 SHEET 2 AB3 4 THR L 102 VAL L 106 1 O LYS L 103 N VAL L 11 SHEET 3 AB3 4 ALA L 84 ASP L 92 -1 N TYR L 86 O THR L 102 SHEET 4 AB3 4 GLY L 95B PHE L 98 -1 O VAL L 97 N SER L 90 SHEET 1 AB4 3 VAL L 19 CYS L 23 0 SHEET 2 AB4 3 SER L 70 ILE L 75 -1 O ALA L 71 N CYS L 23 SHEET 3 AB4 3 SER L 63 SER L 67 -1 N SER L 65 O SER L 72 SHEET 1 AB5 4 SER L 115 VAL L 116 0 SHEET 2 AB5 4 VAL L 134 PHE L 140 -1 O SER L 138 N SER L 115 SHEET 3 AB5 4 TYR L 173 TYR L 178 -1 O SER L 177 N CYS L 135 SHEET 4 AB5 4 SER L 166 LYS L 167 -1 N SER L 166 O ALA L 174 SHEET 1 AB6 3 THR L 146 ALA L 151 0 SHEET 2 AB6 3 TYR L 192 HIS L 198 -1 O GLN L 195 N ALA L 148 SHEET 3 AB6 3 SER L 201 THR L 206 -1 O SER L 201 N HIS L 198 SHEET 1 AB7 4 GLN M 3 GLN M 6 0 SHEET 2 AB7 4 LEU M 18 SER M 25 -1 O GLN M 23 N VAL M 5 SHEET 3 AB7 4 THR M 77 TRP M 82 -1 O TRP M 82 N LEU M 18 SHEET 4 AB7 4 VAL M 67 ASP M 72 -1 N ASP M 72 O THR M 77 SHEET 1 AB8 6 GLU M 10 LYS M 12 0 SHEET 2 AB8 6 THR M 107 VAL M 111 1 O THR M 110 N LYS M 12 SHEET 3 AB8 6 ALA M 88 ILE M 95 -1 N ALA M 88 O VAL M 109 SHEET 4 AB8 6 ILE M 34 GLN M 39 -1 N GLY M 35 O ALA M 93 SHEET 5 AB8 6 LEU M 45 TYR M 52 -1 O MET M 48 N TRP M 36 SHEET 6 AB8 6 ASP M 56 TYR M 59 -1 O ARG M 58 N ILE M 50 SHEET 1 AB9 4 GLU M 10 LYS M 12 0 SHEET 2 AB9 4 THR M 107 VAL M 111 1 O THR M 110 N LYS M 12 SHEET 3 AB9 4 ALA M 88 ILE M 95 -1 N ALA M 88 O VAL M 109 SHEET 4 AB9 4 GLY M 100F TRP M 103 -1 O TYR M 102 N ARG M 94 SHEET 1 AC1 2 VAL M 98 TYR M 99 0 SHEET 2 AC1 2 GLY M 100B TRP M 100C-1 O GLY M 100B N TYR M 99 SHEET 1 AC2 4 SER M 136 LEU M 140 0 SHEET 2 AC2 4 THR M 151 TYR M 161 -1 O LEU M 157 N PHE M 138 SHEET 3 AC2 4 TYR M 192 PRO M 201 -1 O VAL M 200 N ALA M 152 SHEET 4 AC2 4 VAL M 179 THR M 181 -1 N HIS M 180 O VAL M 197 SHEET 1 AC3 4 SER M 136 LEU M 140 0 SHEET 2 AC3 4 THR M 151 TYR M 161 -1 O LEU M 157 N PHE M 138 SHEET 3 AC3 4 TYR M 192 PRO M 201 -1 O VAL M 200 N ALA M 152 SHEET 4 AC3 4 VAL M 185 LEU M 186 -1 N VAL M 185 O SER M 193 SHEET 1 AC4 3 THR M 167 TRP M 170 0 SHEET 2 AC4 3 TYR M 210 HIS M 216 -1 O ASN M 213 N SER M 169 SHEET 3 AC4 3 THR M 221 VAL M 227 -1 O VAL M 223 N VAL M 214 SHEET 1 AC5 4 MET N 4 SER N 7 0 SHEET 2 AC5 4 VAL N 19 ALA N 25 -1 O THR N 22 N SER N 7 SHEET 3 AC5 4 ASP N 70 ILE N 75 -1 O LEU N 73 N ILE N 21 SHEET 4 AC5 4 PHE N 62 SER N 67 -1 N SER N 65 O THR N 72 SHEET 1 AC6 6 SER N 10 ALA N 13 0 SHEET 2 AC6 6 THR N 102 ILE N 106 1 O GLU N 105 N ALA N 13 SHEET 3 AC6 6 THR N 85 GLN N 90 -1 N TYR N 86 O THR N 102 SHEET 4 AC6 6 LEU N 33 GLN N 38 -1 N GLN N 38 O THR N 85 SHEET 5 AC6 6 LYS N 45 TYR N 49 -1 O LYS N 45 N GLN N 37 SHEET 6 AC6 6 SER N 53 LEU N 54 -1 O SER N 53 N TYR N 49 SHEET 1 AC7 4 SER N 10 ALA N 13 0 SHEET 2 AC7 4 THR N 102 ILE N 106 1 O GLU N 105 N ALA N 13 SHEET 3 AC7 4 THR N 85 GLN N 90 -1 N TYR N 86 O THR N 102 SHEET 4 AC7 4 THR N 97 PHE N 98 -1 O THR N 97 N GLN N 90 SHEET 1 AC8 4 SER N 114 PHE N 118 0 SHEET 2 AC8 4 THR N 129 PHE N 139 -1 O VAL N 133 N PHE N 118 SHEET 3 AC8 4 TYR N 173 SER N 182 -1 O TYR N 173 N PHE N 139 SHEET 4 AC8 4 SER N 159 VAL N 163 -1 N SER N 162 O SER N 176 SHEET 1 AC9 4 ALA N 153 LEU N 154 0 SHEET 2 AC9 4 LYS N 145 VAL N 150 -1 N VAL N 150 O ALA N 153 SHEET 3 AC9 4 VAL N 191 THR N 197 -1 O GLU N 195 N GLN N 147 SHEET 4 AC9 4 VAL N 205 ASN N 210 -1 O PHE N 209 N TYR N 192 SSBOND 1 CYS A 336 CYS A 361 1555 1555 2.03 SSBOND 2 CYS A 379 CYS A 432 1555 1555 2.03 SSBOND 3 CYS A 391 CYS A 525 1555 1555 2.03 SSBOND 4 CYS A 480 CYS A 488 1555 1555 2.03 SSBOND 5 CYS H 22 CYS H 92 1555 1555 2.04 SSBOND 6 CYS H 140 CYS H 196 1555 1555 2.03 SSBOND 7 CYS L 23 CYS L 88 1555 1555 2.04 SSBOND 8 CYS L 135 CYS L 194 1555 1555 2.04 SSBOND 9 CYS M 22 CYS M 92 1555 1555 2.03 SSBOND 10 CYS M 156 CYS M 212 1555 1555 2.03 SSBOND 11 CYS N 23 CYS N 88 1555 1555 2.04 SSBOND 12 CYS N 134 CYS N 194 1555 1555 2.03 LINK ND2 ASN A 343 C1 NAG B 1 1555 1555 1.45 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 LINK O6 NAG B 1 C1 FUC B 4 1555 1555 1.44 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.45 CISPEP 1 PHE H 146 PRO H 147 0 -8.22 CISPEP 2 GLU H 148 PRO H 149 0 7.95 CISPEP 3 TYR L 141 PRO L 142 0 9.50 CISPEP 4 PHE M 162 PRO M 163 0 -5.20 CISPEP 5 GLU M 164 PRO M 165 0 8.92 CISPEP 6 SER N 7 PRO N 8 0 1.35 CISPEP 7 TYR N 140 PRO N 141 0 4.49 CRYST1 60.399 77.035 266.445 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016557 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012981 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003753 0.00000