HEADER PROTEIN BINDING 17-APR-23 8SIU TITLE ORIGIN RECOGNITION COMPLEX ASSOCIATED (ORCA) PROTEIN BOUND TO ORC2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LEUCINE-RICH REPEAT AND WD REPEAT-CONTAINING PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ORIGIN RECOGNITION COMPLEX-ASSOCIATED PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ORIGIN RECOGNITION COMPLEX SUBUNIT 2; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: LRWD1; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 11 ORGANISM_COMMON: NORWAY RAT; SOURCE 12 ORGANISM_TAXID: 10116; SOURCE 13 GENE: ORC2, ORC2L; SOURCE 14 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 15 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 7111 KEYWDS CHROMATIN BINDING, ORC BINDING, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR F.BLEICHERT,B.E.EKUNDAYO REVDAT 4 15-NOV-23 8SIU 1 REMARK REVDAT 3 27-SEP-23 8SIU 1 JRNL REVDAT 2 30-AUG-23 8SIU 1 JRNL REVDAT 1 02-AUG-23 8SIU 0 JRNL AUTH S.SAHU,B.E.EKUNDAYO,A.KUMAR,F.BLEICHERT JRNL TITL A DUAL ROLE FOR THE CHROMATIN READER ORCA/LRWD1 IN TARGETING JRNL TITL 2 THE ORIGIN RECOGNITION COMPLEX TO CHROMATIN. JRNL REF EMBO J. V. 42 14654 2023 JRNL REFN ESSN 1460-2075 JRNL PMID 37551430 JRNL DOI 10.15252/EMBJ.2023114654 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.010 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.3 REMARK 3 NUMBER OF REFLECTIONS : 42004 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.400 REMARK 3 FREE R VALUE TEST SET COUNT : 1847 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.5100 - 4.2200 0.99 3508 163 0.1634 0.1651 REMARK 3 2 4.2200 - 3.3500 1.00 3385 155 0.1419 0.1739 REMARK 3 3 3.3500 - 2.9300 0.98 3306 149 0.1589 0.2139 REMARK 3 4 2.9300 - 2.6600 0.97 3272 151 0.1666 0.1923 REMARK 3 5 2.6600 - 2.4700 0.96 3192 148 0.1627 0.2066 REMARK 3 6 2.4700 - 2.3300 0.95 3168 144 0.1581 0.2216 REMARK 3 7 2.3300 - 2.2100 0.94 3134 148 0.1592 0.2095 REMARK 3 8 2.2100 - 2.1100 0.94 3137 146 0.1679 0.1993 REMARK 3 9 2.1100 - 2.0300 0.95 3127 143 0.1956 0.2528 REMARK 3 10 2.0300 - 1.9600 0.92 3061 135 0.2206 0.2613 REMARK 3 11 1.9600 - 1.9000 0.85 2819 130 0.2266 0.2849 REMARK 3 12 1.9000 - 1.8500 0.79 2638 122 0.2573 0.2718 REMARK 3 13 1.8500 - 1.8000 0.74 2410 113 0.3122 0.3898 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.187 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.145 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.28 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3119 REMARK 3 ANGLE : 1.091 4265 REMARK 3 CHIRALITY : 0.063 486 REMARK 3 PLANARITY : 0.008 545 REMARK 3 DIHEDRAL : 13.442 1100 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8SIU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-APR-23. REMARK 100 THE DEPOSITION ID IS D_1000273730. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-OCT-19 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979092 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45458 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 45.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 39.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.2 M AMMONIUM SULFATE, 100 MM MES PH REMARK 280 5.3, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.28350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 39.28350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 45.51150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 67.71550 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 45.51150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 67.71550 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 39.28350 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 45.51150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 67.71550 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 39.28350 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 45.51150 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 67.71550 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 O1 SO4 A 702 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 982 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1083 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -3 REMARK 465 ALA A 354 REMARK 465 THR A 355 REMARK 465 GLN A 356 REMARK 465 ALA A 357 REMARK 465 GLY A 358 REMARK 465 HIS A 359 REMARK 465 LYS A 360 REMARK 465 PRO A 590 REMARK 465 PRO A 591 REMARK 465 PRO A 592 REMARK 465 LEU A 593 REMARK 465 GLU A 594 REMARK 465 THR A 595 REMARK 465 CYS A 648 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 THR B 3 REMARK 465 LEU B 4 REMARK 465 ARG B 5 REMARK 465 LEU B 6 REMARK 465 LYS B 7 REMARK 465 GLU B 8 REMARK 465 ALA B 9 REMARK 465 LYS B 10 REMARK 465 ARG B 29 REMARK 465 GLU B 30 REMARK 465 GLY B 31 REMARK 465 GLY B 32 REMARK 465 THR B 33 REMARK 465 LYS B 34 REMARK 465 LEU B 35 REMARK 465 LYS B 36 REMARK 465 LYS B 37 REMARK 465 GLU B 38 REMARK 465 LYS B 39 REMARK 465 VAL B 40 REMARK 465 GLN B 41 REMARK 465 LEU B 42 REMARK 465 LEU B 43 REMARK 465 VAL B 44 REMARK 465 ASN B 45 REMARK 465 PRO B 46 REMARK 465 GLN B 47 REMARK 465 LYS B 48 REMARK 465 VAL B 49 REMARK 465 ILE B 50 REMARK 465 LYS B 51 REMARK 465 LYS B 52 REMARK 465 ALA B 53 REMARK 465 GLU B 54 REMARK 465 CYS B 55 REMARK 465 GLU B 56 REMARK 465 LEU B 57 REMARK 465 GLU B 58 REMARK 465 LYS B 59 REMARK 465 SER B 60 REMARK 465 ASP B 61 REMARK 465 LEU B 62 REMARK 465 GLU B 63 REMARK 465 VAL B 64 REMARK 465 LEU B 65 REMARK 465 GLU B 66 REMARK 465 ASP B 67 REMARK 465 GLN B 68 REMARK 465 ASN B 69 REMARK 465 TYR B 70 REMARK 465 VAL B 71 REMARK 465 GLU B 72 REMARK 465 VAL B 73 REMARK 465 LEU B 74 REMARK 465 GLY B 75 REMARK 465 ARG B 76 REMARK 465 ASN B 77 REMARK 465 ILE B 78 REMARK 465 GLN B 79 REMARK 465 GLU B 80 REMARK 465 SER B 81 REMARK 465 LEU B 82 REMARK 465 GLY B 83 REMARK 465 ASN B 84 REMARK 465 GLY B 85 REMARK 465 SER B 86 REMARK 465 ALA B 87 REMARK 465 VAL B 88 REMARK 465 ASP B 89 REMARK 465 GLY B 90 REMARK 465 ARG B 91 REMARK 465 ASN B 92 REMARK 465 LYS B 93 REMARK 465 VAL B 94 REMARK 465 TYR B 95 REMARK 465 SER B 96 REMARK 465 PHE B 97 REMARK 465 GLN B 98 REMARK 465 HIS B 99 REMARK 465 ARG B 100 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH11 ARG A 448 O HOH A 806 1.50 REMARK 500 O HOH A 1041 O HOH A 1042 1.60 REMARK 500 OD1 ASN A 622 O HOH A 801 1.62 REMARK 500 O4 SO4 A 702 O HOH A 802 1.64 REMARK 500 O HOH A 962 O HOH A 1037 1.76 REMARK 500 OD2 ASP A 493 O HOH A 803 1.78 REMARK 500 O HOH A 887 O HOH A 1018 1.95 REMARK 500 O HOH A 952 O HOH A 1080 2.00 REMARK 500 O HOH A 1022 O HOH A 1071 2.01 REMARK 500 O HOH B 209 O HOH B 218 2.02 REMARK 500 O HOH A 1020 O HOH A 1086 2.09 REMARK 500 O HOH A 887 O HOH A 1031 2.10 REMARK 500 OG1 THR A 404 OD2 ASP A 457 2.11 REMARK 500 O HOH A 937 O HOH A 1027 2.11 REMARK 500 O HOH A 816 O HOH A 1038 2.15 REMARK 500 O PRO A 478 O HOH A 804 2.17 REMARK 500 O HOH A 813 O HOH A 934 2.18 REMARK 500 O HOH A 909 O HOH A 1042 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 910 O HOH A 1059 8456 1.96 REMARK 500 O HOH A 946 O HOH A 1046 8456 2.02 REMARK 500 OE2 GLU A 485 NZ LYS A 618 8556 2.08 REMARK 500 O HOH A 1038 O HOH A 1075 8456 2.08 REMARK 500 O HOH A 826 O HOH A 1050 6554 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 427 -179.55 -68.81 REMARK 500 CYS A 455 63.14 -156.84 REMARK 500 LEU A 504 119.16 -167.08 REMARK 500 TYR A 557 35.28 82.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8SIY RELATED DB: PDB DBREF1 8SIU A -1 648 UNP A0A140UHX1_RAT DBREF2 8SIU A A0A140UHX1 268 648 DBREF 8SIU B 1 100 UNP Q75PQ8 ORC2_RAT 1 100 SEQADV 8SIU SER A -3 UNP A0A140UHX EXPRESSION TAG SEQADV 8SIU ASN A -2 UNP A0A140UHX EXPRESSION TAG SEQADV 8SIU ARG A 646 UNP A0A140UHX LYS 646 ENGINEERED MUTATION SEQADV 8SIU ARG A 647 UNP A0A140UHX THR 647 ENGINEERED MUTATION SEQADV 8SIU SER B -2 UNP Q75PQ8 EXPRESSION TAG SEQADV 8SIU ASN B -1 UNP Q75PQ8 EXPRESSION TAG SEQADV 8SIU ALA B 0 UNP Q75PQ8 EXPRESSION TAG SEQRES 1 A 383 SER ASN ALA LEU HIS LEU GLU PRO LEU HIS PHE LEU GLN SEQRES 2 A 383 CYS HIS SER ARG ASN ASN SER PRO LYS ASP LEU GLU THR SEQRES 3 A 383 GLN LEU TRP ALA CYS ALA PHE GLU PRO ALA ARG GLU GLU SEQRES 4 A 383 GLY HIS SER GLY ALA THR SER GLN THR VAL ALA THR CYS SEQRES 5 A 383 GLY GLY GLU ALA VAL CYS VAL ILE ASP CYS GLN THR GLY SEQRES 6 A 383 LEU VAL LEU HIS LYS TYR LYS VAL PRO GLY GLU GLU PHE SEQRES 7 A 383 PHE SER VAL ALA TRP THR ALA LEU THR VAL ALA THR GLN SEQRES 8 A 383 ALA GLY HIS LYS LYS ARG TRP ASN MSE LEU ALA ALA ALA SEQRES 9 A 383 GLY LEU ARG GLY MSE VAL ARG LEU LEU HIS VAL ARG ALA SEQRES 10 A 383 GLY PHE CYS CYS SER VAL ILE ARG ALA HIS LYS LYS ALA SEQRES 11 A 383 ILE ALA THR LEU CYS PHE SER PRO THR HIS GLU THR HIS SEQRES 12 A 383 LEU PHE THR ALA SER TYR ASP LYS ARG ILE ILE LEU TRP SEQRES 13 A 383 ASP ILE GLY VAL PRO ASN HIS ASP TYR LYS PHE GLN ALA SEQRES 14 A 383 SER GLN LEU LEU THR LEU ASN CYS SER SER VAL PRO LEU SEQRES 15 A 383 ARG LEU CYS PRO VAL ALA THR CYS PRO ASP SER PHE LEU SEQRES 16 A 383 LEU ALA GLY CYS GLU GLY GLY CYS GLY CYS TRP ASP VAL SEQRES 17 A 383 ARG LEU ASP GLN PRO GLN LYS GLN ARG VAL CYS GLU VAL SEQRES 18 A 383 ASN PHE VAL PHE SER GLY ASP SER GLU VAL SER GLY GLN SEQRES 19 A 383 ARG VAL ASP GLY LEU ALA PHE VAL ASN GLU ASP VAL VAL SEQRES 20 A 383 ALA SER LYS GLY SER GLY GLN GLY THR ILE TYR LEU TRP SEQRES 21 A 383 SER TRP SER GLN THR TRP ALA SER ARG GLY SER GLN SER SEQRES 22 A 383 VAL LEU PRO VAL VAL ILE LEU ALA GLN LEU GLN TRP SER SEQRES 23 A 383 PRO THR SER LEU ALA TYR PHE SER LEU SER THR CYS PRO SEQRES 24 A 383 ASP LYS ASN LEU VAL LEU CYS GLY ASP GLU GLU GLY SER SEQRES 25 A 383 VAL TRP ILE TYR ASP VAL GLU HIS LEU LEU LYS GLN PRO SEQRES 26 A 383 PRO PRO LEU GLU THR THR LEU GLN PRO PRO THR GLN ILE SEQRES 27 A 383 LEU LYS TRP PRO GLN PRO VAL ALA LEU GLY GLN PRO VAL SEQRES 28 A 383 THR LYS THR MSE VAL ASN THR VAL VAL ALA ASN ALA ALA SEQRES 29 A 383 PHE THR TYR LEU THR ALA LEU THR ASP SER ASN ILE VAL SEQRES 30 A 383 SER ILE TRP ARG ARG CYS SEQRES 1 B 103 SER ASN ALA MET SER THR LEU ARG LEU LYS GLU ALA LYS SEQRES 2 B 103 VAL PRO SER VAL GLN PHE VAL GLY ASP ASP ASP VAL LEU SEQRES 3 B 103 SER HIS ILE LEU ASP ARG GLU GLY GLY THR LYS LEU LYS SEQRES 4 B 103 LYS GLU LYS VAL GLN LEU LEU VAL ASN PRO GLN LYS VAL SEQRES 5 B 103 ILE LYS LYS ALA GLU CYS GLU LEU GLU LYS SER ASP LEU SEQRES 6 B 103 GLU VAL LEU GLU ASP GLN ASN TYR VAL GLU VAL LEU GLY SEQRES 7 B 103 ARG ASN ILE GLN GLU SER LEU GLY ASN GLY SER ALA VAL SEQRES 8 B 103 ASP GLY ARG ASN LYS VAL TYR SER PHE GLN HIS ARG MODRES 8SIU MSE A 365 MET MODIFIED RESIDUE MODRES 8SIU MSE A 374 MET MODIFIED RESIDUE MODRES 8SIU MSE A 620 MET MODIFIED RESIDUE HET MSE A 365 17 HET MSE A 374 17 HET MSE A 620 17 HET SO4 A 701 5 HET SO4 A 702 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 HOH *321(H2 O) HELIX 1 AA1 SER A 281 SER A 285 5 5 HELIX 2 AA2 TRP A 527 SER A 533 1 7 HELIX 3 AA3 PRO A 564 LYS A 566 5 3 HELIX 4 AA4 VAL A 583 GLN A 589 1 7 SHEET 1 AA1 5 VAL A 621 ALA A 626 0 SHEET 2 AA1 5 TYR A 632 THR A 637 -1 O THR A 634 N VAL A 625 SHEET 3 AA1 5 VAL A 642 ARG A 646 -1 O TRP A 645 N LEU A 633 SHEET 4 AA1 5 GLU A 272 GLN A 278 -1 N HIS A 275 O ILE A 644 SHEET 5 AA1 5 VAL B 14 PHE B 16 1 O GLN B 15 N PHE A 276 SHEET 1 AA2 4 LEU A 293 PHE A 298 0 SHEET 2 AA2 4 THR A 313 GLY A 318 -1 O ALA A 315 N ALA A 297 SHEET 3 AA2 4 ALA A 321 ASP A 326 -1 O ILE A 325 N VAL A 314 SHEET 4 AA2 4 VAL A 332 LYS A 337 -1 O TYR A 336 N VAL A 322 SHEET 1 AA3 4 PHE A 343 LEU A 351 0 SHEET 2 AA3 4 TRP A 363 GLY A 370 -1 O ALA A 367 N ALA A 347 SHEET 3 AA3 4 MSE A 374 HIS A 379 -1 O LEU A 378 N LEU A 366 SHEET 4 AA3 4 PHE A 384 ARG A 390 -1 O ILE A 389 N VAL A 375 SHEET 1 AA4 5 ILE A 396 PHE A 401 0 SHEET 2 AA4 5 HIS A 408 SER A 413 -1 O PHE A 410 N CYS A 400 SHEET 3 AA4 5 ARG A 417 ASP A 422 -1 O TRP A 421 N LEU A 409 SHEET 4 AA4 5 SER A 435 ASN A 441 -1 O LEU A 440 N ILE A 418 SHEET 5 AA4 5 GLN A 481 VAL A 483 1 O ARG A 482 N ASN A 441 SHEET 1 AA5 5 PRO A 446 PRO A 451 0 SHEET 2 AA5 5 PHE A 459 CYS A 464 -1 O GLY A 463 N LEU A 447 SHEET 3 AA5 5 GLY A 467 ASP A 472 -1 O TRP A 471 N LEU A 460 SHEET 4 AA5 5 VAL A 486 VAL A 489 -1 O PHE A 488 N CYS A 468 SHEET 5 AA5 5 VAL A 539 PRO A 541 1 O LEU A 540 N ASN A 487 SHEET 1 AA6 4 GLY A 503 PHE A 506 0 SHEET 2 AA6 4 VAL A 511 LYS A 515 -1 O ALA A 513 N ALA A 505 SHEET 3 AA6 4 THR A 521 SER A 526 -1 O TRP A 525 N VAL A 512 SHEET 4 AA6 4 ILE A 544 GLN A 549 -1 O LEU A 545 N LEU A 524 SHEET 1 AA7 4 LEU A 560 CYS A 563 0 SHEET 2 AA7 4 LEU A 568 GLY A 572 -1 O LEU A 570 N SER A 561 SHEET 3 AA7 4 VAL A 578 ASP A 582 -1 O TRP A 579 N CYS A 571 SHEET 4 AA7 4 GLN A 602 LEU A 604 -1 O LEU A 604 N VAL A 578 SHEET 1 AA8 2 VAL A 610 ALA A 611 0 SHEET 2 AA8 2 GLN A 614 PRO A 615 -1 O GLN A 614 N ALA A 611 LINK C ASN A 364 N MSE A 365 1555 1555 1.33 LINK C MSE A 365 N LEU A 366 1555 1555 1.32 LINK C GLY A 373 N MSE A 374 1555 1555 1.32 LINK C MSE A 374 N VAL A 375 1555 1555 1.33 LINK C THR A 619 N MSE A 620 1555 1555 1.32 LINK C MSE A 620 N VAL A 621 1555 1555 1.32 CRYST1 91.023 135.431 78.567 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010986 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007384 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012728 0.00000