HEADER TRANSFERASE/DNA 17-APR-23 8SJ0 TITLE STRUCTURE OF TERNARY COMPLEX OF CGAS WITH DSDNA AND BOUND 2'-DATP COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLIC GMP-AMP SYNTHASE; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: CATALYTIC DOMAIN (UNP RESIDUES 147-507); COMPND 5 SYNONYM: CGAMP SYNTHASE,CGAS,M-CGAS,2'3'-CGAMP SYNTHASE,MAB-21 COMPND 6 DOMAIN-CONTAINING PROTEIN 1; COMPND 7 EC: 2.7.7.86; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: PALINDROMIC DNA18; COMPND 11 CHAIN: E, F, I, J; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: CGAS, MB21D1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: NHMT MCAT WT; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 13 ORGANISM_TAXID: 32630 KEYWDS IMMUNE SYSTEM, TRANSFERASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.WU,J.SOHN REVDAT 3 29-MAY-24 8SJ0 1 JRNL REVDAT 2 22-MAY-24 8SJ0 1 JRNL REVDAT 1 24-APR-24 8SJ0 0 JRNL AUTH S.WU,S.B.GABELLI,J.SOHN JRNL TITL THE STRUCTURAL BASIS FOR 2'-5'/3'-5'-CGAMP SYNTHESIS BY JRNL TITL 2 CGAS. JRNL REF NAT COMMUN V. 15 4012 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 38740774 JRNL DOI 10.1038/S41467-024-48365-3 REMARK 2 REMARK 2 RESOLUTION. 2.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.980 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 35961 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.560 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.8000 - 6.1400 1.00 2599 154 0.1557 0.1753 REMARK 3 2 6.1400 - 4.8800 1.00 2494 146 0.1675 0.2059 REMARK 3 3 4.8800 - 4.2700 1.00 2471 145 0.1592 0.2097 REMARK 3 4 4.2600 - 3.8800 1.00 2433 144 0.1720 0.2159 REMARK 3 5 3.8800 - 3.6000 1.00 2454 144 0.1982 0.3014 REMARK 3 6 3.6000 - 3.3900 1.00 2414 143 0.2010 0.2308 REMARK 3 7 3.3900 - 3.2200 1.00 2429 143 0.2078 0.2652 REMARK 3 8 3.2200 - 3.0800 1.00 2427 142 0.2326 0.2686 REMARK 3 9 3.0800 - 2.9600 1.00 2414 143 0.2632 0.3215 REMARK 3 10 2.9600 - 2.8600 1.00 2407 141 0.2381 0.2767 REMARK 3 11 2.8600 - 2.7700 1.00 2400 141 0.2383 0.2479 REMARK 3 12 2.7700 - 2.6900 1.00 2429 143 0.2447 0.2977 REMARK 3 13 2.6900 - 2.6200 1.00 2399 143 0.2746 0.3192 REMARK 3 14 2.6200 - 2.5500 0.92 2191 128 0.2979 0.3897 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.280 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 NULL REMARK 3 ANGLE : 1.105 NULL REMARK 3 CHIRALITY : 0.055 1149 REMARK 3 PLANARITY : 0.011 1084 REMARK 3 DIHEDRAL : 24.424 1470 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESSEQ 148:506) OR (CHAIN D AND RESSEQ REMARK 3 1:1) REMARK 3 ORIGIN FOR THE GROUP (A): -4.8639 26.8064 -20.4010 REMARK 3 T TENSOR REMARK 3 T11: 0.2713 T22: 0.2855 REMARK 3 T33: 0.3407 T12: 0.0081 REMARK 3 T13: -0.0646 T23: 0.0160 REMARK 3 L TENSOR REMARK 3 L11: 1.9688 L22: 2.6889 REMARK 3 L33: 1.5457 L12: 0.5507 REMARK 3 L13: -0.5288 L23: 0.0461 REMARK 3 S TENSOR REMARK 3 S11: 0.0138 S12: 0.0083 S13: 0.2099 REMARK 3 S21: 0.1356 S22: -0.0280 S23: -0.2072 REMARK 3 S31: -0.0479 S32: 0.0392 S33: 0.0194 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN C AND RESSEQ 148:506) OR (CHAIN D AND RESSEQ REMARK 3 2:2) REMARK 3 ORIGIN FOR THE GROUP (A): -33.5822 -8.2453 -18.8021 REMARK 3 T TENSOR REMARK 3 T11: 0.3798 T22: 0.4294 REMARK 3 T33: 0.3988 T12: -0.0531 REMARK 3 T13: 0.0551 T23: -0.0439 REMARK 3 L TENSOR REMARK 3 L11: 2.1652 L22: 3.2789 REMARK 3 L33: 0.9844 L12: 1.3780 REMARK 3 L13: 0.1530 L23: 0.5875 REMARK 3 S TENSOR REMARK 3 S11: -0.1432 S12: 0.1434 S13: -0.0316 REMARK 3 S21: 0.0831 S22: 0.0782 S23: 0.5078 REMARK 3 S31: 0.0438 S32: -0.0371 S33: 0.0504 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN E AND RESSEQ 1:18) REMARK 3 ORIGIN FOR THE GROUP (A): -28.7191 22.9491 -31.7758 REMARK 3 T TENSOR REMARK 3 T11: 0.5651 T22: 0.8437 REMARK 3 T33: 0.5692 T12: 0.1679 REMARK 3 T13: 0.1153 T23: -0.0676 REMARK 3 L TENSOR REMARK 3 L11: 3.5713 L22: 3.4654 REMARK 3 L33: 2.1045 L12: 0.9835 REMARK 3 L13: 1.3551 L23: -1.8803 REMARK 3 S TENSOR REMARK 3 S11: 0.2259 S12: 1.1310 S13: -0.0803 REMARK 3 S21: -0.7724 S22: 0.0442 S23: 0.2043 REMARK 3 S31: 0.1597 S32: -0.3683 S33: -0.1649 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN F AND RESSEQ 1:18) REMARK 3 ORIGIN FOR THE GROUP (A): -29.4297 23.5375 -32.6276 REMARK 3 T TENSOR REMARK 3 T11: 0.6719 T22: 0.9718 REMARK 3 T33: 0.5273 T12: 0.0971 REMARK 3 T13: -0.0010 T23: 0.0187 REMARK 3 L TENSOR REMARK 3 L11: 2.6958 L22: 4.1760 REMARK 3 L33: 2.0296 L12: 0.9613 REMARK 3 L13: 0.4747 L23: -0.4209 REMARK 3 S TENSOR REMARK 3 S11: 0.2861 S12: 0.9780 S13: -0.1183 REMARK 3 S21: -0.4856 S22: -0.1621 S23: 0.0021 REMARK 3 S31: 0.4850 S32: -0.8253 S33: -0.0851 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN I AND RESSEQ 1:18) REMARK 3 ORIGIN FOR THE GROUP (A): -8.1188 -8.6349 -18.0085 REMARK 3 T TENSOR REMARK 3 T11: 0.5623 T22: 0.5174 REMARK 3 T33: 0.5998 T12: 0.0981 REMARK 3 T13: -0.0300 T23: -0.0347 REMARK 3 L TENSOR REMARK 3 L11: 4.0379 L22: 3.9374 REMARK 3 L33: 2.8851 L12: 1.4533 REMARK 3 L13: -0.9415 L23: 0.7132 REMARK 3 S TENSOR REMARK 3 S11: 0.2598 S12: -0.2364 S13: -0.6221 REMARK 3 S21: 0.3073 S22: 0.1219 S23: -0.2439 REMARK 3 S31: 0.4790 S32: 0.5238 S33: -0.4368 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN J AND RESSEQ 1:18) REMARK 3 ORIGIN FOR THE GROUP (A): -8.5291 -6.6449 -18.8046 REMARK 3 T TENSOR REMARK 3 T11: 0.6122 T22: 0.6147 REMARK 3 T33: 0.5472 T12: -0.0106 REMARK 3 T13: 0.0454 T23: -0.1832 REMARK 3 L TENSOR REMARK 3 L11: 5.2980 L22: 4.7723 REMARK 3 L33: 1.3893 L12: -0.1954 REMARK 3 L13: 0.4470 L23: -0.2566 REMARK 3 S TENSOR REMARK 3 S11: 0.1831 S12: -0.2812 S13: -0.3921 REMARK 3 S21: 0.2581 S22: 0.0880 S23: -0.6165 REMARK 3 S31: -0.3129 S32: 0.5179 S33: -0.2333 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8SJ0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-APR-23. REMARK 100 THE DEPOSITION ID IS D_1000273853. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAR-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0-7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9202 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20210205 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.7 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36058 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.550 REMARK 200 RESOLUTION RANGE LOW (A) : 29.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.67 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.74500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 11.7.03 REMARK 200 STARTING MODEL: PDB ENTRY 4LEZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM ACETATE, 32% MPD, 0.1 M REMARK 280 BIS-TRIS PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.75150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.60250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.15000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 71.60250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.75150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.15000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, E, F, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 144 REMARK 465 THR A 145 REMARK 465 GLY A 146 REMARK 465 PRO A 147 REMARK 465 PRO A 243 REMARK 465 ARG A 244 REMARK 465 GLY A 245 REMARK 465 LEU A 507 REMARK 465 GLY C 144 REMARK 465 THR C 145 REMARK 465 GLY C 146 REMARK 465 PRO C 147 REMARK 465 LYS C 240 REMARK 465 ARG C 241 REMARK 465 ILE C 242 REMARK 465 PRO C 243 REMARK 465 ARG C 244 REMARK 465 GLY C 245 REMARK 465 ASN C 246 REMARK 465 LEU C 252 REMARK 465 GLU C 253 REMARK 465 GLY C 254 REMARK 465 GLU C 255 REMARK 465 LEU C 507 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE C 320 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 301 N - CA - CB ANGL. DEV. = -8.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 185 -149.41 35.46 REMARK 500 SER A 207 -62.87 76.72 REMARK 500 GLU A 255 -31.75 88.01 REMARK 500 ASN A 300 97.88 -38.01 REMARK 500 PRO A 301 -90.75 24.45 REMARK 500 GLU A 302 153.91 -44.96 REMARK 500 SER A 321 -8.24 -59.62 REMARK 500 LYS A 353 57.69 -119.35 REMARK 500 GLU A 414 -17.80 -48.14 REMARK 500 ASN A 499 20.17 -151.74 REMARK 500 GLN C 183 -75.57 -118.28 REMARK 500 SER C 207 -61.67 83.63 REMARK 500 TYR C 229 43.97 39.17 REMARK 500 HIS C 250 2.73 -66.09 REMARK 500 ASN C 300 -177.66 -57.40 REMARK 500 PRO C 344 171.16 -57.44 REMARK 500 ASN C 351 34.18 -97.45 REMARK 500 SER C 357 -75.85 -57.63 REMARK 500 PHE C 358 34.53 -88.41 REMARK 500 ASN C 377 59.83 -147.22 REMARK 500 ARG C 483 -77.62 -47.75 REMARK 500 LYS C 484 -38.67 -31.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG C 299 ASN C 300 141.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG C 181 0.17 SIDE CHAIN REMARK 500 ARG C 267 0.11 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 603 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 211 OE1 REMARK 620 2 DTP A 601 O3G 68.7 REMARK 620 3 DTP A 601 O2B 106.4 68.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 602 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 378 NE2 REMARK 620 2 CYS A 384 SG 108.1 REMARK 620 3 CYS A 385 SG 105.3 131.1 REMARK 620 4 CYS A 392 SG 92.6 103.5 109.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 603 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER C 199 OG REMARK 620 2 GLU C 211 OE1 135.6 REMARK 620 3 DTP C 601 O3G 79.1 61.0 REMARK 620 4 DTP C 601 O2B 82.8 96.6 65.5 REMARK 620 5 HOH C 712 O 106.5 117.7 160.1 95.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 602 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 378 NE2 REMARK 620 2 CYS C 384 SG 111.4 REMARK 620 3 CYS C 385 SG 107.4 124.2 REMARK 620 4 CYS C 392 SG 105.2 98.7 108.0 REMARK 620 N 1 2 3 DBREF 8SJ0 A 147 507 UNP Q8C6L5 CGAS_MOUSE 147 507 DBREF 8SJ0 C 147 507 UNP Q8C6L5 CGAS_MOUSE 147 507 DBREF 8SJ0 E 1 18 PDB 8SJ0 8SJ0 1 18 DBREF 8SJ0 F 1 18 PDB 8SJ0 8SJ0 1 18 DBREF 8SJ0 I 1 18 PDB 8SJ0 8SJ0 1 18 DBREF 8SJ0 J 1 18 PDB 8SJ0 8SJ0 1 18 SEQADV 8SJ0 GLY A 144 UNP Q8C6L5 EXPRESSION TAG SEQADV 8SJ0 THR A 145 UNP Q8C6L5 EXPRESSION TAG SEQADV 8SJ0 GLY A 146 UNP Q8C6L5 EXPRESSION TAG SEQADV 8SJ0 GLY C 144 UNP Q8C6L5 EXPRESSION TAG SEQADV 8SJ0 THR C 145 UNP Q8C6L5 EXPRESSION TAG SEQADV 8SJ0 GLY C 146 UNP Q8C6L5 EXPRESSION TAG SEQRES 1 A 364 GLY THR GLY PRO ASP LYS LEU LYS LYS VAL LEU ASP LYS SEQRES 2 A 364 LEU ARG LEU LYS ARG LYS ASP ILE SER GLU ALA ALA GLU SEQRES 3 A 364 THR VAL ASN LYS VAL VAL GLU ARG LEU LEU ARG ARG MET SEQRES 4 A 364 GLN LYS ARG GLU SER GLU PHE LYS GLY VAL GLU GLN LEU SEQRES 5 A 364 ASN THR GLY SER TYR TYR GLU HIS VAL LYS ILE SER ALA SEQRES 6 A 364 PRO ASN GLU PHE ASP VAL MET PHE LYS LEU GLU VAL PRO SEQRES 7 A 364 ARG ILE GLU LEU GLN GLU TYR TYR GLU THR GLY ALA PHE SEQRES 8 A 364 TYR LEU VAL LYS PHE LYS ARG ILE PRO ARG GLY ASN PRO SEQRES 9 A 364 LEU SER HIS PHE LEU GLU GLY GLU VAL LEU SER ALA THR SEQRES 10 A 364 LYS MET LEU SER LYS PHE ARG LYS ILE ILE LYS GLU GLU SEQRES 11 A 364 VAL LYS GLU ILE LYS ASP ILE ASP VAL SER VAL GLU LYS SEQRES 12 A 364 GLU LYS PRO GLY SER PRO ALA VAL THR LEU LEU ILE ARG SEQRES 13 A 364 ASN PRO GLU GLU ILE SER VAL ASP ILE ILE LEU ALA LEU SEQRES 14 A 364 GLU SER LYS GLY SER TRP PRO ILE SER THR LYS GLU GLY SEQRES 15 A 364 LEU PRO ILE GLN GLY TRP LEU GLY THR LYS VAL ARG THR SEQRES 16 A 364 ASN LEU ARG ARG GLU PRO PHE TYR LEU VAL PRO LYS ASN SEQRES 17 A 364 ALA LYS ASP GLY ASN SER PHE GLN GLY GLU THR TRP ARG SEQRES 18 A 364 LEU SER PHE SER HIS THR GLU LYS TYR ILE LEU ASN ASN SEQRES 19 A 364 HIS GLY ILE GLU LYS THR CYS CYS GLU SER SER GLY ALA SEQRES 20 A 364 LYS CYS CYS ARG LYS GLU CYS LEU LYS LEU MET LYS TYR SEQRES 21 A 364 LEU LEU GLU GLN LEU LYS LYS GLU PHE GLN GLU LEU ASP SEQRES 22 A 364 ALA PHE CYS SER TYR HIS VAL LYS THR ALA ILE PHE HIS SEQRES 23 A 364 MET TRP THR GLN ASP PRO GLN ASP SER GLN TRP ASP PRO SEQRES 24 A 364 ARG ASN LEU SER SER CYS PHE ASP LYS LEU LEU ALA PHE SEQRES 25 A 364 PHE LEU GLU CYS LEU ARG THR GLU LYS LEU ASP HIS TYR SEQRES 26 A 364 PHE ILE PRO LYS PHE ASN LEU PHE SER GLN GLU LEU ILE SEQRES 27 A 364 ASP ARG LYS SER LYS GLU PHE LEU SER LYS LYS ILE GLU SEQRES 28 A 364 TYR GLU ARG ASN ASN GLY PHE PRO ILE PHE ASP LYS LEU SEQRES 1 C 364 GLY THR GLY PRO ASP LYS LEU LYS LYS VAL LEU ASP LYS SEQRES 2 C 364 LEU ARG LEU LYS ARG LYS ASP ILE SER GLU ALA ALA GLU SEQRES 3 C 364 THR VAL ASN LYS VAL VAL GLU ARG LEU LEU ARG ARG MET SEQRES 4 C 364 GLN LYS ARG GLU SER GLU PHE LYS GLY VAL GLU GLN LEU SEQRES 5 C 364 ASN THR GLY SER TYR TYR GLU HIS VAL LYS ILE SER ALA SEQRES 6 C 364 PRO ASN GLU PHE ASP VAL MET PHE LYS LEU GLU VAL PRO SEQRES 7 C 364 ARG ILE GLU LEU GLN GLU TYR TYR GLU THR GLY ALA PHE SEQRES 8 C 364 TYR LEU VAL LYS PHE LYS ARG ILE PRO ARG GLY ASN PRO SEQRES 9 C 364 LEU SER HIS PHE LEU GLU GLY GLU VAL LEU SER ALA THR SEQRES 10 C 364 LYS MET LEU SER LYS PHE ARG LYS ILE ILE LYS GLU GLU SEQRES 11 C 364 VAL LYS GLU ILE LYS ASP ILE ASP VAL SER VAL GLU LYS SEQRES 12 C 364 GLU LYS PRO GLY SER PRO ALA VAL THR LEU LEU ILE ARG SEQRES 13 C 364 ASN PRO GLU GLU ILE SER VAL ASP ILE ILE LEU ALA LEU SEQRES 14 C 364 GLU SER LYS GLY SER TRP PRO ILE SER THR LYS GLU GLY SEQRES 15 C 364 LEU PRO ILE GLN GLY TRP LEU GLY THR LYS VAL ARG THR SEQRES 16 C 364 ASN LEU ARG ARG GLU PRO PHE TYR LEU VAL PRO LYS ASN SEQRES 17 C 364 ALA LYS ASP GLY ASN SER PHE GLN GLY GLU THR TRP ARG SEQRES 18 C 364 LEU SER PHE SER HIS THR GLU LYS TYR ILE LEU ASN ASN SEQRES 19 C 364 HIS GLY ILE GLU LYS THR CYS CYS GLU SER SER GLY ALA SEQRES 20 C 364 LYS CYS CYS ARG LYS GLU CYS LEU LYS LEU MET LYS TYR SEQRES 21 C 364 LEU LEU GLU GLN LEU LYS LYS GLU PHE GLN GLU LEU ASP SEQRES 22 C 364 ALA PHE CYS SER TYR HIS VAL LYS THR ALA ILE PHE HIS SEQRES 23 C 364 MET TRP THR GLN ASP PRO GLN ASP SER GLN TRP ASP PRO SEQRES 24 C 364 ARG ASN LEU SER SER CYS PHE ASP LYS LEU LEU ALA PHE SEQRES 25 C 364 PHE LEU GLU CYS LEU ARG THR GLU LYS LEU ASP HIS TYR SEQRES 26 C 364 PHE ILE PRO LYS PHE ASN LEU PHE SER GLN GLU LEU ILE SEQRES 27 C 364 ASP ARG LYS SER LYS GLU PHE LEU SER LYS LYS ILE GLU SEQRES 28 C 364 TYR GLU ARG ASN ASN GLY PHE PRO ILE PHE ASP LYS LEU SEQRES 1 E 18 DA DT DC DT DG DT DA DC DA DT DG DT DA SEQRES 2 E 18 DC DA DG DA DT SEQRES 1 F 18 DA DT DC DT DG DT DA DC DA DT DG DT DA SEQRES 2 F 18 DC DA DG DA DT SEQRES 1 I 18 DA DT DC DT DG DT DA DC DA DT DG DT DA SEQRES 2 I 18 DC DA DG DA DT SEQRES 1 J 18 DA DT DC DT DG DT DA DC DA DT DG DT DA SEQRES 2 J 18 DC DA DG DA DT HET DTP A 601 41 HET ZN A 602 1 HET MG A 603 1 HET DTP C 601 41 HET ZN C 602 1 HET MG C 603 1 HETNAM DTP 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE HETNAM ZN ZINC ION HETNAM MG MAGNESIUM ION FORMUL 7 DTP 2(C10 H16 N5 O12 P3) FORMUL 8 ZN 2(ZN 2+) FORMUL 9 MG 2(MG 2+) FORMUL 13 HOH *34(H2 O) HELIX 1 AA1 ASP A 148 ARG A 158 1 11 HELIX 2 AA2 LYS A 160 LYS A 184 1 25 HELIX 3 AA3 LEU A 248 HIS A 250 5 3 HELIX 4 AA4 SER A 258 GLU A 276 1 19 HELIX 5 AA5 PRO A 319 LYS A 323 5 5 HELIX 6 AA6 GLY A 333 GLU A 343 1 11 HELIX 7 AA7 PHE A 358 GLU A 361 5 4 HELIX 8 AA8 PHE A 367 ASN A 376 1 10 HELIX 9 AA9 CYS A 393 PHE A 412 1 20 HELIX 10 AB1 GLN A 413 ASP A 416 5 4 HELIX 11 AB2 CYS A 419 ASP A 434 1 16 HELIX 12 AB3 GLN A 436 ARG A 443 5 8 HELIX 13 AB4 ASN A 444 GLU A 463 1 20 HELIX 14 AB5 ASP A 482 ASN A 498 1 17 HELIX 15 AB6 PHE A 501 LYS A 506 5 6 HELIX 16 AB7 LYS C 149 ARG C 158 1 10 HELIX 17 AB8 LYS C 160 ARG C 185 1 26 HELIX 18 AB9 TYR C 229 THR C 231 5 3 HELIX 19 AC1 PRO C 247 PHE C 251 5 5 HELIX 20 AC2 SER C 258 GLU C 276 1 19 HELIX 21 AC3 PRO C 319 LYS C 323 5 5 HELIX 22 AC4 LEU C 332 ARG C 341 1 10 HELIX 23 AC5 PHE C 358 GLU C 361 5 4 HELIX 24 AC6 PHE C 367 ASN C 377 1 11 HELIX 25 AC7 CYS C 393 PHE C 412 1 20 HELIX 26 AC8 GLN C 413 PHE C 418 5 6 HELIX 27 AC9 CYS C 419 ASP C 434 1 16 HELIX 28 AD1 GLN C 436 ARG C 443 5 8 HELIX 29 AD2 ASN C 444 THR C 462 1 19 HELIX 30 AD3 ASP C 482 ASN C 499 1 18 HELIX 31 AD4 GLY C 500 LYS C 506 5 7 SHEET 1 AA1 7 GLU A 193 THR A 197 0 SHEET 2 AA1 7 GLU A 211 GLU A 219 -1 O MET A 215 N LEU A 195 SHEET 3 AA1 7 ILE A 304 SER A 314 1 O ILE A 309 N PHE A 216 SHEET 4 AA1 7 PHE A 345 PRO A 349 -1 O LEU A 347 N LEU A 312 SHEET 5 AA1 7 TRP A 363 SER A 366 -1 O ARG A 364 N VAL A 348 SHEET 6 AA1 7 PHE A 234 PHE A 239 -1 N TYR A 235 O TRP A 363 SHEET 7 AA1 7 ILE A 223 GLU A 227 -1 N GLU A 224 O LYS A 238 SHEET 1 AA2 5 GLU A 193 THR A 197 0 SHEET 2 AA2 5 GLU A 211 GLU A 219 -1 O MET A 215 N LEU A 195 SHEET 3 AA2 5 ILE A 304 SER A 314 1 O ILE A 309 N PHE A 216 SHEET 4 AA2 5 ALA A 293 ILE A 298 -1 N ILE A 298 O ILE A 304 SHEET 5 AA2 5 VAL A 282 VAL A 284 -1 N SER A 283 O LEU A 297 SHEET 1 AA3 2 LEU A 252 GLU A 253 0 SHEET 2 AA3 2 VAL A 256 LEU A 257 -1 O VAL A 256 N GLU A 253 SHEET 1 AA4 7 GLU C 193 THR C 197 0 SHEET 2 AA4 7 GLU C 211 GLU C 219 -1 O LYS C 217 N GLU C 193 SHEET 3 AA4 7 GLU C 303 SER C 314 1 O ILE C 309 N VAL C 214 SHEET 4 AA4 7 PHE C 345 PRO C 349 -1 O PHE C 345 N SER C 314 SHEET 5 AA4 7 TRP C 363 SER C 366 -1 O ARG C 364 N VAL C 348 SHEET 6 AA4 7 PHE C 234 LYS C 238 -1 N TYR C 235 O TRP C 363 SHEET 7 AA4 7 GLU C 224 GLU C 227 -1 N GLU C 224 O LYS C 238 SHEET 1 AA5 5 GLU C 193 THR C 197 0 SHEET 2 AA5 5 GLU C 211 GLU C 219 -1 O LYS C 217 N GLU C 193 SHEET 3 AA5 5 GLU C 303 SER C 314 1 O ILE C 309 N VAL C 214 SHEET 4 AA5 5 ALA C 293 ARG C 299 -1 N LEU C 296 O VAL C 306 SHEET 5 AA5 5 ASP C 281 VAL C 284 -1 N SER C 283 O LEU C 297 LINK OE1 GLU A 211 MG MG A 603 1555 1555 2.61 LINK NE2 HIS A 378 ZN ZN A 602 1555 1555 2.05 LINK SG CYS A 384 ZN ZN A 602 1555 1555 2.27 LINK SG CYS A 385 ZN ZN A 602 1555 1555 2.31 LINK SG CYS A 392 ZN ZN A 602 1555 1555 2.37 LINK O3G DTP A 601 MG MG A 603 1555 1555 2.52 LINK O2B DTP A 601 MG MG A 603 1555 1555 2.73 LINK OG SER C 199 MG MG C 603 1555 1555 2.98 LINK OE1 GLU C 211 MG MG C 603 1555 1555 2.49 LINK NE2 HIS C 378 ZN ZN C 602 1555 1555 2.11 LINK SG CYS C 384 ZN ZN C 602 1555 1555 2.32 LINK SG CYS C 385 ZN ZN C 602 1555 1555 2.27 LINK SG CYS C 392 ZN ZN C 602 1555 1555 2.34 LINK O3G DTP C 601 MG MG C 603 1555 1555 2.66 LINK O2B DTP C 601 MG MG C 603 1555 1555 2.68 LINK MG MG C 603 O HOH C 712 1555 1555 2.94 CRYST1 77.503 98.300 143.205 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012903 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010173 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006983 0.00000