data_8SJG # _entry.id 8SJG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.373 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8SJG pdb_00008sjg 10.2210/pdb8sjg/pdb WWPDB D_1000273906 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 8SJF _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8SJG _pdbx_database_status.recvd_initial_deposition_date 2023-04-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Hoffnagle, A.M.' 1 0000-0002-4840-312X 'Tezcan, F.A.' 2 0000-0002-4733-6500 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_id_ASTM JACSAT _citation.journal_id_CSD ? _citation.journal_id_ISSN 1520-5126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 145 _citation.language ? _citation.page_first 14208 _citation.page_last 14214 _citation.title 'Atomically Accurate Design of Metalloproteins with Predefined Coordination Geometries.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/jacs.3c04047 _citation.pdbx_database_id_PubMed 37352018 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hoffnagle, A.M.' 1 0000-0002-4840-312X primary 'Tezcan, F.A.' 2 0000-0002-4733-6500 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 8SJG _cell.details ? _cell.formula_units_Z ? _cell.length_a 67.663 _cell.length_a_esd ? _cell.length_b 67.663 _cell.length_b_esd ? _cell.length_c 109.635 _cell.length_c_esd ? _cell.volume 434692.704 _cell.volume_esd ? _cell.Z_PDB 18 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8SJG _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall 'R 3' _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Tet4 12561.611 2 ? ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 3 water nat water 18.015 24 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ADWEAAMLTLLMMLKVIEKADNAAQVLTALWFMALAAHMAALATPPKLEDKSPASPEMIDFRVGFEELATEIGKAIKLAA LGKVKEAQAAAEQLKTTVNAHWQKYRSAENLYFQ ; _entity_poly.pdbx_seq_one_letter_code_can ;ADWEAAMLTLLMMLKVIEKADNAAQVLTALWFMALAAHMAALATPPKLEDKSPASPEMIDFRVGFEELATEIGKAIKLAA LGKVKEAQAAAEQLKTTVNAHWQKYRSAENLYFQ ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ASP n 1 3 TRP n 1 4 GLU n 1 5 ALA n 1 6 ALA n 1 7 MET n 1 8 LEU n 1 9 THR n 1 10 LEU n 1 11 LEU n 1 12 MET n 1 13 MET n 1 14 LEU n 1 15 LYS n 1 16 VAL n 1 17 ILE n 1 18 GLU n 1 19 LYS n 1 20 ALA n 1 21 ASP n 1 22 ASN n 1 23 ALA n 1 24 ALA n 1 25 GLN n 1 26 VAL n 1 27 LEU n 1 28 THR n 1 29 ALA n 1 30 LEU n 1 31 TRP n 1 32 PHE n 1 33 MET n 1 34 ALA n 1 35 LEU n 1 36 ALA n 1 37 ALA n 1 38 HIS n 1 39 MET n 1 40 ALA n 1 41 ALA n 1 42 LEU n 1 43 ALA n 1 44 THR n 1 45 PRO n 1 46 PRO n 1 47 LYS n 1 48 LEU n 1 49 GLU n 1 50 ASP n 1 51 LYS n 1 52 SER n 1 53 PRO n 1 54 ALA n 1 55 SER n 1 56 PRO n 1 57 GLU n 1 58 MET n 1 59 ILE n 1 60 ASP n 1 61 PHE n 1 62 ARG n 1 63 VAL n 1 64 GLY n 1 65 PHE n 1 66 GLU n 1 67 GLU n 1 68 LEU n 1 69 ALA n 1 70 THR n 1 71 GLU n 1 72 ILE n 1 73 GLY n 1 74 LYS n 1 75 ALA n 1 76 ILE n 1 77 LYS n 1 78 LEU n 1 79 ALA n 1 80 ALA n 1 81 LEU n 1 82 GLY n 1 83 LYS n 1 84 VAL n 1 85 LYS n 1 86 GLU n 1 87 ALA n 1 88 GLN n 1 89 ALA n 1 90 ALA n 1 91 ALA n 1 92 GLU n 1 93 GLN n 1 94 LEU n 1 95 LYS n 1 96 THR n 1 97 THR n 1 98 VAL n 1 99 ASN n 1 100 ALA n 1 101 HIS n 1 102 TRP n 1 103 GLN n 1 104 LYS n 1 105 TYR n 1 106 ARG n 1 107 SER n 1 108 ALA n 1 109 GLU n 1 110 ASN n 1 111 LEU n 1 112 TYR n 1 113 PHE n 1 114 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 114 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'synthetic construct' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 32630 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8SJG _struct_ref.pdbx_db_accession 8SJG _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8SJG A 1 ? 114 ? 8SJG 1 ? 114 ? 1 114 2 1 8SJG B 1 ? 114 ? 8SJG 1 ? 114 ? 1 114 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8SJG _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.92 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 36.02 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '30% PEG 400, 200 mM CaCl2, 100 mM Tris (pH 8.5)' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 298 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 S 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-04-15 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.033 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.033 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 8.3.1 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate 51.88 _reflns.entry_id 8SJG _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.39 _reflns.d_resolution_low 33.83 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 7372 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.72 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 2.0 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 7.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.059 _reflns.pdbx_Rpim_I_all 0.033 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.00 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.048 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.39 _reflns_shell.d_res_low 2.48 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 736 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 2.2 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 3.998 _reflns_shell.pdbx_Rpim_I_all 2.313 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.422 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 98.93 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 3.218 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 113.32 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8SJG _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.39 _refine.ls_d_res_low 33.83 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 7372 _refine.ls_number_reflns_R_free 1476 _refine.ls_number_reflns_R_work 13252 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.70 _refine.ls_percent_reflns_R_free 10.02 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2446 _refine.ls_R_factor_R_free 0.2860 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2396 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 36.9259 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.4239 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.39 _refine_hist.d_res_low 33.83 _refine_hist.number_atoms_solvent 24 _refine_hist.number_atoms_total 1652 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1626 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0043 ? 1665 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.8350 ? 2256 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0389 ? 263 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0054 ? 282 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 27.6911 ? 610 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.39 2.47 . . 132 1181 98.57 . . . . 0.3546 . . . . . . . . . . . 0.4083 'X-RAY DIFFRACTION' 2.47 2.56 . . 134 1234 100.00 . . . . 0.3286 . . . . . . . . . . . 0.3349 'X-RAY DIFFRACTION' 2.56 2.66 . . 132 1194 100.00 . . . . 0.3132 . . . . . . . . . . . 0.3734 'X-RAY DIFFRACTION' 2.66 2.78 . . 134 1194 100.00 . . . . 0.3002 . . . . . . . . . . . 0.3030 'X-RAY DIFFRACTION' 2.78 2.93 . . 126 1226 99.85 . . . . 0.2747 . . . . . . . . . . . 0.2976 'X-RAY DIFFRACTION' 2.93 3.11 . . 138 1196 100.00 . . . . 0.3039 . . . . . . . . . . . 0.3711 'X-RAY DIFFRACTION' 3.11 3.35 . . 144 1224 100.00 . . . . 0.2707 . . . . . . . . . . . 0.3017 'X-RAY DIFFRACTION' 3.35 3.68 . . 126 1172 100.00 . . . . 0.2524 . . . . . . . . . . . 0.2846 'X-RAY DIFFRACTION' 3.69 4.22 . . 136 1238 100.00 . . . . 0.2040 . . . . . . . . . . . 0.2810 'X-RAY DIFFRACTION' 4.23 5.30 . . 136 1192 100.00 . . . . 0.1941 . . . . . . . . . . . 0.2855 'X-RAY DIFFRACTION' 5.32 33.83 . . 138 1201 98.46 . . . . 0.2104 . . . . . . . . . . . 0.2272 # _struct.entry_id 8SJG _struct.title 'Zn-Bound Structure of Computationally Designed Homotrimer Tet4' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8SJG _struct_keywords.text 'Metalloprotein, computational design, DE NOVO PROTEIN' _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 2 ? LYS A 19 ? ASP A 2 LYS A 19 1 ? 18 HELX_P HELX_P2 AA2 ASN A 22 ? LEU A 42 ? ASN A 22 LEU A 42 1 ? 21 HELX_P HELX_P3 AA3 PRO A 45 ? GLU A 49 ? PRO A 45 GLU A 49 5 ? 5 HELX_P HELX_P4 AA4 SER A 55 ? LEU A 81 ? SER A 55 LEU A 81 1 ? 27 HELX_P HELX_P5 AA5 LYS A 83 ? TYR A 105 ? LYS A 83 TYR A 105 1 ? 23 HELX_P HELX_P6 AA6 ASP B 2 ? ILE B 17 ? ASP B 2 ILE B 17 1 ? 16 HELX_P HELX_P7 AA7 ALA B 24 ? ALA B 41 ? ALA B 24 ALA B 41 1 ? 18 HELX_P HELX_P8 AA8 PRO B 45 ? GLU B 49 ? PRO B 45 GLU B 49 5 ? 5 HELX_P HELX_P9 AA9 MET B 58 ? LEU B 81 ? MET B 58 LEU B 81 1 ? 24 HELX_P HELX_P10 AB1 LYS B 83 ? ARG B 106 ? LYS B 83 ARG B 106 1 ? 24 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 38 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 38 A ZN 201 1_555 ? ? ? ? ? ? ? 2.033 ? ? metalc2 metalc ? ? A HIS 38 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 38 A ZN 201 2_665 ? ? ? ? ? ? ? 2.033 ? ? metalc3 metalc ? ? C ZN . ZN ? ? ? 1_555 E HOH . O ? ? A ZN 201 A HOH 311 1_555 ? ? ? ? ? ? ? 2.039 ? ? metalc4 metalc ? ? C ZN . ZN ? ? ? 1_555 E HOH . O ? ? A ZN 201 A HOH 311 2_665 ? ? ? ? ? ? ? 2.039 ? ? metalc5 metalc ? ? B HIS 38 NE2 ? ? ? 1_555 D ZN . ZN ? ? B HIS 38 B ZN 201 1_555 ? ? ? ? ? ? ? 2.111 ? ? metalc6 metalc ? ? B HIS 38 NE2 ? ? ? 1_555 D ZN . ZN ? ? B HIS 38 B ZN 201 2_655 ? ? ? ? ? ? ? 2.111 ? ? metalc7 metalc ? ? D ZN . ZN ? ? ? 1_555 F HOH . O ? ? B ZN 201 B HOH 304 1_555 ? ? ? ? ? ? ? 1.999 ? ? metalc8 metalc ? ? D ZN . ZN ? ? ? 1_555 F HOH . O ? ? B ZN 201 B HOH 304 2_655 ? ? ? ? ? ? ? 1.999 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 8SJG _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.014779 _atom_sites.fract_transf_matrix[1][2] 0.008533 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017065 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009121 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? ZN ? ? 24.64596 5.25405 ? ? 2.14387 29.76375 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 ASP 2 2 2 ASP ASP A . n A 1 3 TRP 3 3 3 TRP TRP A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 ALA 5 5 5 ALA ALA A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 MET 7 7 7 MET MET A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 MET 12 12 12 MET MET A . n A 1 13 MET 13 13 13 MET MET A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 GLN 25 25 25 GLN GLN A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 TRP 31 31 31 TRP TRP A . n A 1 32 PHE 32 32 32 PHE PHE A . n A 1 33 MET 33 33 33 MET MET A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 ALA 36 36 36 ALA ALA A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 HIS 38 38 38 HIS HIS A . n A 1 39 MET 39 39 39 MET MET A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 PRO 45 45 45 PRO PRO A . n A 1 46 PRO 46 46 46 PRO PRO A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 PRO 53 53 53 PRO PRO A . n A 1 54 ALA 54 54 54 ALA ALA A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 PRO 56 56 56 PRO PRO A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 MET 58 58 58 MET MET A . n A 1 59 ILE 59 59 59 ILE ILE A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 PHE 61 61 61 PHE PHE A . n A 1 62 ARG 62 62 62 ARG ARG A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 PHE 65 65 65 PHE PHE A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 THR 70 70 70 THR THR A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 ALA 79 79 79 ALA ALA A . n A 1 80 ALA 80 80 80 ALA ALA A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 GLN 88 88 88 GLN GLN A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 ALA 91 91 91 ALA ALA A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 GLN 93 93 93 GLN GLN A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 LYS 95 95 95 LYS LYS A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 VAL 98 98 98 VAL VAL A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 ALA 100 100 100 ALA ALA A . n A 1 101 HIS 101 101 101 HIS HIS A . n A 1 102 TRP 102 102 102 TRP TRP A . n A 1 103 GLN 103 103 103 GLN GLN A . n A 1 104 LYS 104 104 104 LYS LYS A . n A 1 105 TYR 105 105 105 TYR TYR A . n A 1 106 ARG 106 106 106 ARG ARG A . n A 1 107 SER 107 107 ? ? ? A . n A 1 108 ALA 108 108 ? ? ? A . n A 1 109 GLU 109 109 ? ? ? A . n A 1 110 ASN 110 110 ? ? ? A . n A 1 111 LEU 111 111 ? ? ? A . n A 1 112 TYR 112 112 ? ? ? A . n A 1 113 PHE 113 113 ? ? ? A . n A 1 114 GLN 114 114 ? ? ? A . n B 1 1 ALA 1 1 1 ALA ALA B . n B 1 2 ASP 2 2 2 ASP ASP B . n B 1 3 TRP 3 3 3 TRP TRP B . n B 1 4 GLU 4 4 4 GLU GLU B . n B 1 5 ALA 5 5 5 ALA ALA B . n B 1 6 ALA 6 6 6 ALA ALA B . n B 1 7 MET 7 7 7 MET MET B . n B 1 8 LEU 8 8 8 LEU LEU B . n B 1 9 THR 9 9 9 THR THR B . n B 1 10 LEU 10 10 10 LEU LEU B . n B 1 11 LEU 11 11 11 LEU LEU B . n B 1 12 MET 12 12 12 MET MET B . n B 1 13 MET 13 13 13 MET MET B . n B 1 14 LEU 14 14 14 LEU LEU B . n B 1 15 LYS 15 15 15 LYS LYS B . n B 1 16 VAL 16 16 16 VAL VAL B . n B 1 17 ILE 17 17 17 ILE ILE B . n B 1 18 GLU 18 18 18 GLU GLU B . n B 1 19 LYS 19 19 19 LYS LYS B . n B 1 20 ALA 20 20 20 ALA ALA B . n B 1 21 ASP 21 21 21 ASP ASP B . n B 1 22 ASN 22 22 22 ASN ASN B . n B 1 23 ALA 23 23 23 ALA ALA B . n B 1 24 ALA 24 24 24 ALA ALA B . n B 1 25 GLN 25 25 25 GLN GLN B . n B 1 26 VAL 26 26 26 VAL VAL B . n B 1 27 LEU 27 27 27 LEU LEU B . n B 1 28 THR 28 28 28 THR THR B . n B 1 29 ALA 29 29 29 ALA ALA B . n B 1 30 LEU 30 30 30 LEU LEU B . n B 1 31 TRP 31 31 31 TRP TRP B . n B 1 32 PHE 32 32 32 PHE PHE B . n B 1 33 MET 33 33 33 MET MET B . n B 1 34 ALA 34 34 34 ALA ALA B . n B 1 35 LEU 35 35 35 LEU LEU B . n B 1 36 ALA 36 36 36 ALA ALA B . n B 1 37 ALA 37 37 37 ALA ALA B . n B 1 38 HIS 38 38 38 HIS HIS B . n B 1 39 MET 39 39 39 MET MET B . n B 1 40 ALA 40 40 40 ALA ALA B . n B 1 41 ALA 41 41 41 ALA ALA B . n B 1 42 LEU 42 42 42 LEU LEU B . n B 1 43 ALA 43 43 43 ALA ALA B . n B 1 44 THR 44 44 44 THR THR B . n B 1 45 PRO 45 45 45 PRO PRO B . n B 1 46 PRO 46 46 46 PRO PRO B . n B 1 47 LYS 47 47 47 LYS LYS B . n B 1 48 LEU 48 48 48 LEU LEU B . n B 1 49 GLU 49 49 49 GLU GLU B . n B 1 50 ASP 50 50 50 ASP ASP B . n B 1 51 LYS 51 51 51 LYS LYS B . n B 1 52 SER 52 52 52 SER SER B . n B 1 53 PRO 53 53 53 PRO PRO B . n B 1 54 ALA 54 54 54 ALA ALA B . n B 1 55 SER 55 55 55 SER SER B . n B 1 56 PRO 56 56 56 PRO PRO B . n B 1 57 GLU 57 57 57 GLU GLU B . n B 1 58 MET 58 58 58 MET MET B . n B 1 59 ILE 59 59 59 ILE ILE B . n B 1 60 ASP 60 60 60 ASP ASP B . n B 1 61 PHE 61 61 61 PHE PHE B . n B 1 62 ARG 62 62 62 ARG ARG B . n B 1 63 VAL 63 63 63 VAL VAL B . n B 1 64 GLY 64 64 64 GLY GLY B . n B 1 65 PHE 65 65 65 PHE PHE B . n B 1 66 GLU 66 66 66 GLU GLU B . n B 1 67 GLU 67 67 67 GLU GLU B . n B 1 68 LEU 68 68 68 LEU LEU B . n B 1 69 ALA 69 69 69 ALA ALA B . n B 1 70 THR 70 70 70 THR THR B . n B 1 71 GLU 71 71 71 GLU GLU B . n B 1 72 ILE 72 72 72 ILE ILE B . n B 1 73 GLY 73 73 73 GLY GLY B . n B 1 74 LYS 74 74 74 LYS LYS B . n B 1 75 ALA 75 75 75 ALA ALA B . n B 1 76 ILE 76 76 76 ILE ILE B . n B 1 77 LYS 77 77 77 LYS LYS B . n B 1 78 LEU 78 78 78 LEU LEU B . n B 1 79 ALA 79 79 79 ALA ALA B . n B 1 80 ALA 80 80 80 ALA ALA B . n B 1 81 LEU 81 81 81 LEU LEU B . n B 1 82 GLY 82 82 82 GLY GLY B . n B 1 83 LYS 83 83 83 LYS LYS B . n B 1 84 VAL 84 84 84 VAL VAL B . n B 1 85 LYS 85 85 85 LYS LYS B . n B 1 86 GLU 86 86 86 GLU GLU B . n B 1 87 ALA 87 87 87 ALA ALA B . n B 1 88 GLN 88 88 88 GLN GLN B . n B 1 89 ALA 89 89 89 ALA ALA B . n B 1 90 ALA 90 90 90 ALA ALA B . n B 1 91 ALA 91 91 91 ALA ALA B . n B 1 92 GLU 92 92 92 GLU GLU B . n B 1 93 GLN 93 93 93 GLN GLN B . n B 1 94 LEU 94 94 94 LEU LEU B . n B 1 95 LYS 95 95 95 LYS LYS B . n B 1 96 THR 96 96 96 THR THR B . n B 1 97 THR 97 97 97 THR THR B . n B 1 98 VAL 98 98 98 VAL VAL B . n B 1 99 ASN 99 99 99 ASN ASN B . n B 1 100 ALA 100 100 100 ALA ALA B . n B 1 101 HIS 101 101 101 HIS HIS B . n B 1 102 TRP 102 102 102 TRP TRP B . n B 1 103 GLN 103 103 103 GLN GLN B . n B 1 104 LYS 104 104 104 LYS LYS B . n B 1 105 TYR 105 105 105 TYR TYR B . n B 1 106 ARG 106 106 106 ARG ARG B . n B 1 107 SER 107 107 ? ? ? B . n B 1 108 ALA 108 108 ? ? ? B . n B 1 109 GLU 109 109 ? ? ? B . n B 1 110 ASN 110 110 ? ? ? B . n B 1 111 LEU 111 111 ? ? ? B . n B 1 112 TYR 112 112 ? ? ? B . n B 1 113 PHE 113 113 ? ? ? B . n B 1 114 GLN 114 114 ? ? ? B . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email tezcan@ucsd.edu _pdbx_contact_author.name_first Faik _pdbx_contact_author.name_last Tezcan _pdbx_contact_author.name_mi A _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-4733-6500 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN 1 201 1 ZN ZN A . D 2 ZN 1 201 2 ZN ZN B . E 3 HOH 1 301 16 HOH HOH A . E 3 HOH 2 302 20 HOH HOH A . E 3 HOH 3 303 19 HOH HOH A . E 3 HOH 4 304 12 HOH HOH A . E 3 HOH 5 305 14 HOH HOH A . E 3 HOH 6 306 18 HOH HOH A . E 3 HOH 7 307 2 HOH HOH A . E 3 HOH 8 308 7 HOH HOH A . E 3 HOH 9 309 9 HOH HOH A . E 3 HOH 10 310 3 HOH HOH A . E 3 HOH 11 311 1 HOH HOH A . E 3 HOH 12 312 21 HOH HOH A . E 3 HOH 13 313 6 HOH HOH A . E 3 HOH 14 314 17 HOH HOH A . E 3 HOH 15 315 15 HOH HOH A . E 3 HOH 16 316 10 HOH HOH A . E 3 HOH 17 317 8 HOH HOH A . E 3 HOH 18 318 23 HOH HOH A . F 3 HOH 1 301 24 HOH HOH B . F 3 HOH 2 302 13 HOH HOH B . F 3 HOH 3 303 5 HOH HOH B . F 3 HOH 4 304 4 HOH HOH B . F 3 HOH 5 305 11 HOH HOH B . F 3 HOH 6 306 22 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA trimeric 3 2 author_and_software_defined_assembly PISA trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2,4 A,C,E 2 1,3,5 B,D,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3910 ? 1 MORE -104 ? 1 'SSA (A^2)' 14290 ? 2 'ABSA (A^2)' 3660 ? 2 MORE -87 ? 2 'SSA (A^2)' 15570 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5000000000 -0.8660254038 0.0000000000 33.8315000000 0.8660254038 -0.5000000000 0.0000000000 58.5978768963 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5000000000 -0.8660254038 0.0000000000 67.6630000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5000000000 0.8660254038 0.0000000000 -33.8315000000 -0.8660254038 -0.5000000000 0.0000000000 58.5978768963 0.0000000000 0.0000000000 1.0000000000 0.0000000000 5 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5000000000 0.8660254038 0.0000000000 33.8315000000 -0.8660254038 -0.5000000000 0.0000000000 58.5978768963 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A ZN 201 ? C ZN . 2 1 B ZN 201 ? D ZN . 3 1 A HOH 311 ? E HOH . 4 1 A HOH 318 ? E HOH . 5 1 B HOH 304 ? F HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 38 ? A HIS 38 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 NE2 ? A HIS 38 ? A HIS 38 ? 1_555 0.0 ? 2 NE2 ? A HIS 38 ? A HIS 38 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 O ? E HOH . ? A HOH 311 ? 1_555 113.8 ? 3 NE2 ? A HIS 38 ? A HIS 38 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 O ? E HOH . ? A HOH 311 ? 1_555 113.8 ? 4 NE2 ? A HIS 38 ? A HIS 38 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 O ? E HOH . ? A HOH 311 ? 2_665 113.8 ? 5 NE2 ? A HIS 38 ? A HIS 38 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 O ? E HOH . ? A HOH 311 ? 2_665 113.8 ? 6 O ? E HOH . ? A HOH 311 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 O ? E HOH . ? A HOH 311 ? 2_665 0.0 ? 7 NE2 ? B HIS 38 ? B HIS 38 ? 1_555 ZN ? D ZN . ? B ZN 201 ? 1_555 NE2 ? B HIS 38 ? B HIS 38 ? 1_555 0.0 ? 8 NE2 ? B HIS 38 ? B HIS 38 ? 1_555 ZN ? D ZN . ? B ZN 201 ? 1_555 O ? F HOH . ? B HOH 304 ? 1_555 122.7 ? 9 NE2 ? B HIS 38 ? B HIS 38 ? 1_555 ZN ? D ZN . ? B ZN 201 ? 1_555 O ? F HOH . ? B HOH 304 ? 1_555 122.7 ? 10 NE2 ? B HIS 38 ? B HIS 38 ? 1_555 ZN ? D ZN . ? B ZN 201 ? 1_555 O ? F HOH . ? B HOH 304 ? 2_655 122.7 ? 11 NE2 ? B HIS 38 ? B HIS 38 ? 1_555 ZN ? D ZN . ? B ZN 201 ? 1_555 O ? F HOH . ? B HOH 304 ? 2_655 122.7 ? 12 O ? F HOH . ? B HOH 304 ? 1_555 ZN ? D ZN . ? B ZN 201 ? 1_555 O ? F HOH . ? B HOH 304 ? 2_655 0.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-07-05 2 'Structure model' 1 1 2023-07-12 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y,x-y,z 3 -x+y,-x,z 4 x+1/3,y+2/3,z+2/3 5 -y+1/3,x-y+2/3,z+2/3 6 -x+y+1/3,-x+2/3,z+2/3 7 x+2/3,y+1/3,z+1/3 8 -y+2/3,x-y+1/3,z+1/3 9 -x+y+2/3,-x+1/3,z+1/3 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 4.5551156763 30.6203171392 1.08181632304 0.3350863966 ? 0.0313226524447 ? 0.00320134634444 ? 0.349163691922 ? 0.0588297446856 ? 0.296856263018 ? 4.22527264575 ? -0.285051027368 ? -0.120278672476 ? 4.4633625043 ? 0.604764594884 ? 3.75827005448 ? 0.0987413630715 ? -0.587377199499 ? -0.489935489649 ? 0.731869192049 ? 0.565451457622 ? -0.643957350795 ? -0.805638957495 ? -0.0105480372834 ? -0.307371273144 ? 2 'X-RAY DIFFRACTION' ? refined 15.8926580871 32.1944956077 -18.8198463228 0.78010955538 ? -0.0155175954608 ? 0.0682125583369 ? 1.04583024642 ? -0.0728777991296 ? 0.881786370106 ? 0.019423455337 ? 0.0301424030044 ? -0.045886860187 ? 0.0669685011878 ? -0.0746162485425 ? 0.0532245428381 ? 0.0728875038554 ? -0.571416389664 ? -0.206322840294 ? -0.38948833062 ? 0.54928545569 ? -1.54230532171 ? -0.488228328188 ? 1.12955741391 ? -0.0439021127499 ? 3 'X-RAY DIFFRACTION' ? refined 3.6781127719 23.4393776232 -5.92690683369 0.610412552588 ? 0.0546642507257 ? 0.148844543544 ? 0.331520380387 ? 0.0800608306202 ? 0.708361895461 ? 3.80361787139 ? -0.0933635084392 ? -1.02190301549 ? 1.04667830181 ? 0.126267016256 ? 4.16120804635 ? 0.315638874614 ? 0.233427683562 ? -0.907888447965 ? -0.356139908774 ? 0.324348186537 ? -0.700905644875 ? 1.07196541928 ? -0.544472716835 ? -0.375417048783 ? 4 'X-RAY DIFFRACTION' ? refined 22.1435214894 12.0946973674 15.336403204 1.18864202648 ? -0.00687541168805 ? 0.0371176851226 ? 0.755797191862 ? 0.031617759831 ? 1.73926053429 ? 3.05058680243 ? -0.124983036198 ? 0.214410423786 ? 3.43950941635 ? -0.254481208826 ? 0.403381484992 ? 0.676287776397 ? -0.435865828458 ? -0.12759638539 ? 0.264394413674 ? 0.0943157268023 ? -0.0911008800252 ? 0.165711168871 ? 0.17810704813 ? -0.275434768575 ? 5 'X-RAY DIFFRACTION' ? refined 26.6301620324 21.2953236776 17.1889453781 0.653156383604 ? -0.0864909380336 ? 0.0586837126935 ? 1.03143771375 ? -0.041850410601 ? 1.98938029336 ? 2.54351735853 ? 1.04073081273 ? 0.402463770264 ? 2.26972005101 ? -0.938688381633 ? 0.700731973834 ? -0.203682219676 ? -0.460495620112 ? 0.233989236602 ? 0.0380749080329 ? -0.170147153346 ? 0.110653023265 ? -0.21436262873 ? 0.452809841071 ? 0.0133295112108 ? 6 'X-RAY DIFFRACTION' ? refined 16.9580825344 7.18661792221 -2.66142533282 1.38705339306 ? 0.102684594465 ? 0.177014994026 ? 1.06234430579 ? -0.413397298358 ? 2.74557024907 ? 3.74352822739 ? 0.0530202972696 ? 0.198555008646 ? 3.32130147809 ? 0.219837098511 ? 7.13200188782 ? 2.13244432022 ? 0.49235840876 ? -0.187564744534 ? -0.631572131669 ? -1.91930957971 ? -0.967289374146 ? -0.350556974908 ? -0.719318977832 ? 0.286195234044 ? 7 'X-RAY DIFFRACTION' ? refined 19.562928957 24.6402285252 8.09506923876 1.43980264228 ? -0.156175998568 ? -0.365164608809 ? 0.88124629242 ? -0.00200297046938 ? 2.43730497117 ? 2.29772566089 ? 0.312248059945 ? 0.821576000603 ? 2.95391375208 ? 1.11079211282 ? 2.69655964833 ? 0.75439632029 ? 1.28787915635 ? -0.192199896985 ? -0.0921917297451 ? -0.15795941472 ? 0.235939806119 ? -0.345202328117 ? 0.233403377322 ? -0.248496731313 ? 8 'X-RAY DIFFRACTION' ? refined 14.1113479583 18.4327802242 14.5753409468 0.993629742336 ? -0.0432137217532 ? 0.0190813026538 ? 0.88300814832 ? 0.191292090855 ? 1.61886130669 ? 5.27528645963 ? -1.571373566 ? 1.14569268726 ? 0.763615648859 ? -1.39577977298 ? 4.54200804485 ? 0.736355716573 ? -0.422969902512 ? 0.571625158758 ? 0.477661785874 ? 0.229992226236 ? 0.0922100090782 ? 0.770442762987 ? 0.0726117595167 ? -0.0108556702085 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 1 through 41 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 42 through 55 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 56 through 106 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 1 through 16 ) ; 5 'X-RAY DIFFRACTION' 5 ? ? ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 17 through 42 ) ; 6 'X-RAY DIFFRACTION' 6 ? ? ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 43 through 58 ) ; 7 'X-RAY DIFFRACTION' 7 ? ? ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 59 through 83 ) ; 8 'X-RAY DIFFRACTION' 8 ? ? ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 84 through 106 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17_3644 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? APEX ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? APEX ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_entry_details.entry_id 8SJG _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 2 ? ? -115.08 -166.59 2 1 LEU A 48 ? ? -160.40 56.59 3 1 LYS B 19 ? ? -135.87 -80.13 4 1 ALA B 20 ? ? -87.97 -140.33 5 1 ASP B 21 ? ? -137.59 -47.86 6 1 ASN B 22 ? ? -53.89 98.39 7 1 ALA B 23 ? ? -20.50 -53.11 8 1 ALA B 24 ? ? -68.12 1.02 9 1 LYS B 47 ? ? -87.01 49.62 10 1 LEU B 48 ? ? -142.03 14.25 11 1 ALA B 54 ? ? -115.09 78.88 12 1 GLU B 57 ? ? 41.32 15.18 13 1 GLU B 67 ? ? -29.38 -50.53 14 1 LEU B 81 ? ? -83.54 31.62 15 1 LYS B 85 ? ? -65.70 -79.76 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 318 ? 9.39 . 2 1 O ? B HOH 306 ? 6.28 . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 107 ? A SER 107 2 1 Y 1 A ALA 108 ? A ALA 108 3 1 Y 1 A GLU 109 ? A GLU 109 4 1 Y 1 A ASN 110 ? A ASN 110 5 1 Y 1 A LEU 111 ? A LEU 111 6 1 Y 1 A TYR 112 ? A TYR 112 7 1 Y 1 A PHE 113 ? A PHE 113 8 1 Y 1 A GLN 114 ? A GLN 114 9 1 Y 1 B SER 107 ? B SER 107 10 1 Y 1 B ALA 108 ? B ALA 108 11 1 Y 1 B GLU 109 ? B GLU 109 12 1 Y 1 B ASN 110 ? B ASN 110 13 1 Y 1 B LEU 111 ? B LEU 111 14 1 Y 1 B TYR 112 ? B TYR 112 15 1 Y 1 B PHE 113 ? B PHE 113 16 1 Y 1 B GLN 114 ? B GLN 114 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number R01-GM138884 _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id ZN _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id ZN _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 8SJF _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'equilibrium centrifugation' _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'R 3 :H' _space_group.name_Hall 'R 3' _space_group.IT_number 146 _space_group.crystal_system trigonal _space_group.id 1 #