data_8SJV # _entry.id 8SJV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8SJV pdb_00008sjv 10.2210/pdb8sjv/pdb WWPDB D_1000273715 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-04-24 2 'Structure model' 1 1 2024-05-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8SJV _pdbx_database_status.recvd_initial_deposition_date 2023-04-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible N # _pdbx_contact_author.id 2 _pdbx_contact_author.email rs17@nyu.edu _pdbx_contact_author.name_first Ruojie _pdbx_contact_author.name_last Sha _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-0807-734X # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Janowski, J.' 1 0000-0002-6990-5719 'Vecchioni, S.' 2 0000-0001-8243-650X 'Sha, R.' 3 0000-0002-0807-734X 'Ohayon, Y.P.' 4 0000-0001-7500-4282 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 121 _citation.language ? _citation.page_first e2321992121 _citation.page_last e2321992121 _citation.title 'Engineering tertiary chirality in helical biopolymers.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.2321992121 _citation.pdbx_database_id_PubMed 38684000 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Janowski, J.' 1 ? primary 'Pham, V.A.B.' 2 0000-0001-5074-7303 primary 'Vecchioni, S.' 3 0000-0001-8243-650X primary 'Woloszyn, K.' 4 ? primary 'Lu, B.' 5 0000-0001-6424-2197 primary 'Zou, Y.' 6 ? primary 'Erkalo, B.' 7 ? primary 'Perren, L.' 8 0000-0001-9169-1780 primary 'Rueb, J.' 9 ? primary 'Madnick, J.' 10 0000-0003-1026-8409 primary 'Mao, C.' 11 0000-0001-7516-8666 primary 'Saito, M.' 12 0000-0003-0795-8548 primary 'Ohayon, Y.P.' 13 0000-0001-7500-4282 primary 'Jonoska, N.' 14 ? primary 'Sha, R.' 15 0000-0002-0807-734X # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(P*GP*AP*CP*AP*TP*CP*AP*CP*AP*GP*TP*GP*GP*AP*CP*TP*AP*CP*AP*AP*G)-3') ; 6465.213 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(P*TP*CP*CP*TP*TP*GP*TP*AP*GP*TP*GP*GP*AP*GP*TP*GP*T)-3') ; 5264.404 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(P*GP*AP*AP*CP*AP*CP*TP*CP*CP*TP*GP*AP*GP*AP*CP*TP*AP*CP*AP*A)-3') ; 6095.984 1 ? ? ? ? 4 polymer syn ;DNA (5'-D(P*CP*TP*TP*GP*TP*AP*GP*TP*CP*TP*CP*AP*CP*CP*AP*CP*TP*GP*TP*GP*AP*TP*GP*T)-3') ; 7326.725 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no ;(DG)(DA)(DC)(DA)(DT)(DC)(DA)(DC)(DA)(DG)(DT)(DG)(DG)(DA)(DC)(DT)(DA)(DC)(DA)(DA) (DG) ; GACATCACAGTGGACTACAAG A ? 2 polydeoxyribonucleotide no no '(DT)(DC)(DC)(DT)(DT)(DG)(DT)(DA)(DG)(DT)(DG)(DG)(DA)(DG)(DT)(DG)(DT)' TCCTTGTAGTGGAGTGT B ? 3 polydeoxyribonucleotide no no '(DG)(DA)(DA)(DC)(DA)(DC)(DT)(DC)(DC)(DT)(DG)(DA)(DG)(DA)(DC)(DT)(DA)(DC)(DA)(DA)' GAACACTCCTGAGACTACAA C ? 4 polydeoxyribonucleotide no no ;(DC)(DT)(DT)(DG)(DT)(DA)(DG)(DT)(DC)(DT)(DC)(DA)(DC)(DC)(DA)(DC)(DT)(DG)(DT)(DG) (DA)(DT)(DG)(DT) ; CTTGTAGTCTCACCACTGTGATGT D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DA n 1 3 DC n 1 4 DA n 1 5 DT n 1 6 DC n 1 7 DA n 1 8 DC n 1 9 DA n 1 10 DG n 1 11 DT n 1 12 DG n 1 13 DG n 1 14 DA n 1 15 DC n 1 16 DT n 1 17 DA n 1 18 DC n 1 19 DA n 1 20 DA n 1 21 DG n 2 1 DT n 2 2 DC n 2 3 DC n 2 4 DT n 2 5 DT n 2 6 DG n 2 7 DT n 2 8 DA n 2 9 DG n 2 10 DT n 2 11 DG n 2 12 DG n 2 13 DA n 2 14 DG n 2 15 DT n 2 16 DG n 2 17 DT n 3 1 DG n 3 2 DA n 3 3 DA n 3 4 DC n 3 5 DA n 3 6 DC n 3 7 DT n 3 8 DC n 3 9 DC n 3 10 DT n 3 11 DG n 3 12 DA n 3 13 DG n 3 14 DA n 3 15 DC n 3 16 DT n 3 17 DA n 3 18 DC n 3 19 DA n 3 20 DA n 4 1 DC n 4 2 DT n 4 3 DT n 4 4 DG n 4 5 DT n 4 6 DA n 4 7 DG n 4 8 DT n 4 9 DC n 4 10 DT n 4 11 DC n 4 12 DA n 4 13 DC n 4 14 DC n 4 15 DA n 4 16 DC n 4 17 DT n 4 18 DG n 4 19 DT n 4 20 DG n 4 21 DA n 4 22 DT n 4 23 DG n 4 24 DT n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 21 'synthetic construct' ? 32630 ? 2 1 sample 1 17 'synthetic construct' ? 32630 ? 3 1 sample 1 20 'synthetic construct' ? 32630 ? 4 1 sample 1 24 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG DG A . n A 1 2 DA 2 2 2 DA DA A . n A 1 3 DC 3 3 3 DC DC A . n A 1 4 DA 4 4 4 DA DA A . n A 1 5 DT 5 5 5 DT DT A . n A 1 6 DC 6 6 6 DC DC A . n A 1 7 DA 7 7 7 DA DA A . n A 1 8 DC 8 8 8 DC DC A . n A 1 9 DA 9 9 9 DA DA A . n A 1 10 DG 10 10 10 DG DG A . n A 1 11 DT 11 11 11 DT DT A . n A 1 12 DG 12 12 12 DG DG A . n A 1 13 DG 13 13 13 DG DG A . n A 1 14 DA 14 14 14 DA DA A . n A 1 15 DC 15 15 15 DC DC A . n A 1 16 DT 16 16 16 DT DT A . n A 1 17 DA 17 17 17 DA DA A . n A 1 18 DC 18 18 18 DC DC A . n A 1 19 DA 19 19 19 DA DA A . n A 1 20 DA 20 20 20 DA DA A . n A 1 21 DG 21 21 21 DG DG A . n B 2 1 DT 1 1 1 DT DT B . n B 2 2 DC 2 2 2 DC DC B . n B 2 3 DC 3 3 3 DC DC B . n B 2 4 DT 4 4 4 DT DT B . n B 2 5 DT 5 5 5 DT DT B . n B 2 6 DG 6 6 6 DG DG B . n B 2 7 DT 7 7 7 DT DT B . n B 2 8 DA 8 8 8 DA DA B . n B 2 9 DG 9 9 9 DG DG B . n B 2 10 DT 10 10 10 DT DT B . n B 2 11 DG 11 11 11 DG DG B . n B 2 12 DG 12 12 12 DG DG B . n B 2 13 DA 13 13 13 DA DA B . n B 2 14 DG 14 14 14 DG DG B . n B 2 15 DT 15 15 15 DT DT B . n B 2 16 DG 16 16 16 DG DG B . n B 2 17 DT 17 17 17 DT DT B . n C 3 1 DG 1 1 1 DG DG C . n C 3 2 DA 2 2 2 DA DA C . n C 3 3 DA 3 3 3 DA DA C . n C 3 4 DC 4 4 4 DC DC C . n C 3 5 DA 5 5 5 DA DA C . n C 3 6 DC 6 6 6 DC DC C . n C 3 7 DT 7 7 7 DT DT C . n C 3 8 DC 8 8 8 DC DC C . n C 3 9 DC 9 9 9 DC DC C . n C 3 10 DT 10 10 10 DT DT C . n C 3 11 DG 11 11 11 DG DG C . n C 3 12 DA 12 12 12 DA DA C . n C 3 13 DG 13 13 13 DG DG C . n C 3 14 DA 14 14 14 DA DA C . n C 3 15 DC 15 15 15 DC DC C . n C 3 16 DT 16 16 16 DT DT C . n C 3 17 DA 17 17 17 DA DA C . n C 3 18 DC 18 18 18 DC DC C . n C 3 19 DA 19 19 19 DA DA C . n C 3 20 DA 20 20 20 DA DA C . n D 4 1 DC 1 1 1 DC DC D . n D 4 2 DT 2 2 2 DT DT D . n D 4 3 DT 3 3 3 DT DT D . n D 4 4 DG 4 4 4 DG DG D . n D 4 5 DT 5 5 5 DT DT D . n D 4 6 DA 6 6 6 DA DA D . n D 4 7 DG 7 7 7 DG DG D . n D 4 8 DT 8 8 8 DT DT D . n D 4 9 DC 9 9 9 DC DC D . n D 4 10 DT 10 10 10 DT DT D . n D 4 11 DC 11 11 11 DC DC D . n D 4 12 DA 12 12 12 DA DA D . n D 4 13 DC 13 13 13 DC DC D . n D 4 14 DC 14 14 14 DC DC D . n D 4 15 DA 15 15 15 DA DA D . n D 4 16 DC 16 16 16 DC DC D . n D 4 17 DT 17 17 17 DT DT D . n D 4 18 DG 18 18 18 DG DG D . n D 4 19 DT 19 19 19 DT DT D . n D 4 20 DG 20 20 20 DG DG D . n D 4 21 DA 21 21 21 DA DA D . n D 4 22 DT 22 22 22 DT DT D . n D 4 23 DG 23 23 23 DG DG D . n D 4 24 DT 24 24 24 DT DT D . n # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? STARANISO ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 8SJV _cell.details ? _cell.formula_units_Z ? _cell.length_a 225.409 _cell.length_a_esd ? _cell.length_b 225.409 _cell.length_b_esd ? _cell.length_c 88.324 _cell.length_c_esd ? _cell.volume 3886439.088 _cell.volume_esd ? _cell.Z_PDB 9 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8SJV _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall 'H 3' _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8SJV _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 17.17 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 92.84 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.8 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details '338K-293K at 0.4K/hr' _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100 mM MOPS, 1.25 M magnesium sulfate' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER2 X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-11-13 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.00000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 17-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 592.22 _reflns.entry_id 8SJV _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 8.265 _reflns.d_resolution_low 80.470 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 1125 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 79.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.0 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 9.5 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 8.265 9.512 ? ? ? ? ? ? 189 ? ? ? ? ? ? ? ? ? ? ? 10.2 ? ? ? ? ? ? 1 1 0.370 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 16.998 80.470 ? 28.9 ? ? ? ? 188 ? ? ? ? ? ? ? ? ? ? ? 10.8 ? ? ? ? ? ? 2 1 0.999 ? ? 99.5 ? ? ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 1112.49 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8SJV _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 8.59 _refine.ls_d_res_low 32.75 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 1046 _refine.ls_number_reflns_R_free 45 _refine.ls_number_reflns_R_work 1001 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 73.82 _refine.ls_percent_reflns_R_free 4.30 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1825 _refine.ls_R_factor_R_free 0.2803 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1795 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.96 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB entry 5W6W' _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 38.8327 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.0000 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 8.59 _refine_hist.d_res_low 32.75 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1681 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1681 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0041 ? 1881 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.6636 ? 2891 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0317 ? 328 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0039 ? 82 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 36.1253 ? 805 ? f_dihedral_angle_d ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 8.59 _refine_ls_shell.d_res_low 32.75 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 45 _refine_ls_shell.number_reflns_R_work 1001 _refine_ls_shell.percent_reflns_obs 73.82 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.1795 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? _refine_ls_shell.R_factor_R_free 0.2803 # _struct.entry_id 8SJV _struct.title '[4T24] Self-assembling left-handed tensegrity triangle with 24 interjunction base pairs and R3 symmetry' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8SJV _struct_keywords.text 'Tensegrity triangle, DNA nanotechnology, nanomaterials, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 8SJV 8SJV ? 1 ? 1 2 PDB 8SJV 8SJV ? 2 ? 1 3 PDB 8SJV 8SJV ? 3 ? 1 4 PDB 8SJV 8SJV ? 4 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8SJV A 1 ? 21 ? 8SJV 1 ? 21 ? 1 21 2 2 8SJV B 1 ? 17 ? 8SJV 1 ? 17 ? 1 17 3 3 8SJV C 1 ? 20 ? 8SJV 1 ? 20 ? 1 20 4 4 8SJV D 1 ? 24 ? 8SJV 1 ? 24 ? 1 24 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D 1 2 A,B,C,D 1 3 A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'native gel electrophoresis' _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5000000000 0.8660254038 0.0000000000 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DA 2 N1 ? ? ? 1_555 D DT 24 N3 ? ? A DA 2 D DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DA 2 N6 ? ? ? 1_555 D DT 24 O4 ? ? A DA 2 D DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 3 N3 ? ? ? 1_555 D DG 23 N1 ? ? A DC 3 D DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 3 N4 ? ? ? 1_555 D DG 23 O6 ? ? A DC 3 D DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 3 O2 ? ? ? 1_555 D DG 23 N2 ? ? A DC 3 D DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 4 N1 ? ? ? 1_555 D DT 22 N3 ? ? A DA 4 D DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 4 N6 ? ? ? 1_555 D DT 22 O4 ? ? A DA 4 D DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DT 5 N3 ? ? ? 1_555 D DA 21 N1 ? ? A DT 5 D DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 5 O4 ? ? ? 1_555 D DA 21 N6 ? ? A DT 5 D DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 6 N3 ? ? ? 1_555 D DG 20 N1 ? ? A DC 6 D DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 6 N4 ? ? ? 1_555 D DG 20 O6 ? ? A DC 6 D DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 6 O2 ? ? ? 1_555 D DG 20 N2 ? ? A DC 6 D DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 7 N1 ? ? ? 1_555 D DT 19 N3 ? ? A DA 7 D DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 7 N6 ? ? ? 1_555 D DT 19 O4 ? ? A DA 7 D DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 8 N3 ? ? ? 1_555 D DG 18 N1 ? ? A DC 8 D DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 8 N4 ? ? ? 1_555 D DG 18 O6 ? ? A DC 8 D DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 8 O2 ? ? ? 1_555 D DG 18 N2 ? ? A DC 8 D DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DA 9 N1 ? ? ? 1_555 D DT 17 N3 ? ? A DA 9 D DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DA 9 N6 ? ? ? 1_555 D DT 17 O4 ? ? A DA 9 D DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 10 N1 ? ? ? 1_555 D DC 16 N3 ? ? A DG 10 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 10 N2 ? ? ? 1_555 D DC 16 O2 ? ? A DG 10 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 10 O6 ? ? ? 1_555 D DC 16 N4 ? ? A DG 10 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DT 11 N3 ? ? ? 1_555 D DA 15 N1 ? ? A DT 11 D DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DT 11 O4 ? ? ? 1_555 D DA 15 N6 ? ? A DT 11 D DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 12 N1 ? ? ? 1_555 D DC 14 N3 ? ? A DG 12 D DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 12 N2 ? ? ? 1_555 D DC 14 O2 ? ? A DG 12 D DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 12 O6 ? ? ? 1_555 D DC 14 N4 ? ? A DG 12 D DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 13 N1 ? ? ? 1_555 D DC 13 N3 ? ? A DG 13 D DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DG 13 N2 ? ? ? 1_555 D DC 13 O2 ? ? A DG 13 D DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DG 13 O6 ? ? ? 1_555 D DC 13 N4 ? ? A DG 13 D DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DA 14 N1 ? ? ? 1_555 B DT 10 N3 ? ? A DA 14 B DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DA 14 N6 ? ? ? 1_555 B DT 10 O4 ? ? A DA 14 B DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DC 15 N3 ? ? ? 1_555 B DG 9 N1 ? ? A DC 15 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DC 15 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 15 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DC 15 O2 ? ? ? 1_555 B DG 9 N2 ? ? A DC 15 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DT 16 N3 ? ? ? 1_555 B DA 8 N1 ? ? A DT 16 B DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DT 16 O4 ? ? ? 1_555 B DA 8 N6 ? ? A DT 16 B DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DA 17 N1 ? ? ? 1_555 B DT 7 N3 ? ? A DA 17 B DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DA 17 N6 ? ? ? 1_555 B DT 7 O4 ? ? A DA 17 B DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DC 18 N3 ? ? ? 1_555 B DG 6 N1 ? ? A DC 18 B DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DC 18 N4 ? ? ? 1_555 B DG 6 O6 ? ? A DC 18 B DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DC 18 O2 ? ? ? 1_555 B DG 6 N2 ? ? A DC 18 B DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DA 19 N1 ? ? ? 1_555 B DT 5 N3 ? ? A DA 19 B DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DA 19 N6 ? ? ? 1_555 B DT 5 O4 ? ? A DA 19 B DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A DA 20 N1 ? ? ? 1_555 B DT 4 N3 ? ? A DA 20 B DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A DA 20 N6 ? ? ? 1_555 B DT 4 O4 ? ? A DA 20 B DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A DG 21 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 21 B DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A DG 21 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 21 B DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A DG 21 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 21 B DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B DG 11 N1 ? ? ? 1_555 C DC 9 N3 ? ? B DG 11 C DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? B DG 11 N2 ? ? ? 1_555 C DC 9 O2 ? ? B DG 11 C DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? B DG 11 O6 ? ? ? 1_555 C DC 9 N4 ? ? B DG 11 C DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B DG 12 N1 ? ? ? 1_555 C DC 8 N3 ? ? B DG 12 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B DG 12 N2 ? ? ? 1_555 C DC 8 O2 ? ? B DG 12 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B DG 12 O6 ? ? ? 1_555 C DC 8 N4 ? ? B DG 12 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? B DG 12 N1 ? ? ? 1_555 C DC 9 O2 ? ? B DG 12 C DC 9 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog57 hydrog ? ? B DG 12 N2 ? ? ? 1_555 C DC 9 N3 ? ? B DG 12 C DC 9 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog58 hydrog ? ? B DA 13 N1 ? ? ? 1_555 C DT 7 N3 ? ? B DA 13 C DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? B DA 13 N6 ? ? ? 1_555 C DT 7 O4 ? ? B DA 13 C DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? B DG 14 N1 ? ? ? 1_555 C DC 6 N3 ? ? B DG 14 C DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? B DG 14 N2 ? ? ? 1_555 C DC 6 O2 ? ? B DG 14 C DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? B DG 14 O6 ? ? ? 1_555 C DC 6 N4 ? ? B DG 14 C DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? B DT 15 N3 ? ? ? 1_555 C DA 5 N1 ? ? B DT 15 C DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? B DT 15 O4 ? ? ? 1_555 C DA 5 N6 ? ? B DT 15 C DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? B DG 16 N1 ? ? ? 1_555 C DC 4 N3 ? ? B DG 16 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? B DG 16 N2 ? ? ? 1_555 C DC 4 O2 ? ? B DG 16 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? B DG 16 O6 ? ? ? 1_555 C DC 4 N4 ? ? B DG 16 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? B DT 17 N3 ? ? ? 1_555 C DA 3 N1 ? ? B DT 17 C DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? B DT 17 O4 ? ? ? 1_555 C DA 3 N6 ? ? B DT 17 C DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? C DT 10 N3 ? ? ? 1_555 D DA 12 N1 ? ? C DT 10 D DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? C DT 10 O4 ? ? ? 1_555 D DA 12 N6 ? ? C DT 10 D DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? C DG 11 N1 ? ? ? 1_555 D DC 11 N3 ? ? C DG 11 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? C DG 11 N2 ? ? ? 1_555 D DC 11 O2 ? ? C DG 11 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? C DG 11 O6 ? ? ? 1_555 D DC 11 N4 ? ? C DG 11 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? C DA 12 N1 ? ? ? 1_555 D DT 10 N3 ? ? C DA 12 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? C DA 12 N6 ? ? ? 1_555 D DT 10 O4 ? ? C DA 12 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? C DG 13 N1 ? ? ? 1_555 D DC 9 N3 ? ? C DG 13 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? C DG 13 N2 ? ? ? 1_555 D DC 9 O2 ? ? C DG 13 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? C DG 13 O6 ? ? ? 1_555 D DC 9 N4 ? ? C DG 13 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? C DA 14 N1 ? ? ? 1_555 D DT 8 N3 ? ? C DA 14 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? C DA 14 N6 ? ? ? 1_555 D DT 8 O4 ? ? C DA 14 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? C DC 15 N3 ? ? ? 1_555 D DG 7 N1 ? ? C DC 15 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? C DC 15 N4 ? ? ? 1_555 D DG 7 O6 ? ? C DC 15 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? C DC 15 O2 ? ? ? 1_555 D DG 7 N2 ? ? C DC 15 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? C DT 16 N3 ? ? ? 1_555 D DA 6 N1 ? ? C DT 16 D DA 6 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog86 hydrog ? ? C DA 17 N1 ? ? ? 1_555 D DT 5 N3 ? ? C DA 17 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? C DA 17 N6 ? ? ? 1_555 D DT 5 O4 ? ? C DA 17 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? C DC 18 N3 ? ? ? 1_555 D DG 4 N1 ? ? C DC 18 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? C DC 18 N4 ? ? ? 1_555 D DG 4 O6 ? ? C DC 18 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? C DC 18 O2 ? ? ? 1_555 D DG 4 N2 ? ? C DC 18 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? C DA 19 N1 ? ? ? 1_555 D DT 3 N3 ? ? C DA 19 D DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? C DA 19 N6 ? ? ? 1_555 D DT 3 O4 ? ? C DA 19 D DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? C DA 20 N1 ? ? ? 1_555 D DT 2 N3 ? ? C DA 20 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? C DA 20 N6 ? ? ? 1_555 D DT 2 O4 ? ? C DA 20 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "C3'" _pdbx_validate_rmsd_angle.auth_asym_id_1 C _pdbx_validate_rmsd_angle.auth_comp_id_1 DA _pdbx_validate_rmsd_angle.auth_seq_id_1 14 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "O3'" _pdbx_validate_rmsd_angle.auth_asym_id_2 C _pdbx_validate_rmsd_angle.auth_comp_id_2 DA _pdbx_validate_rmsd_angle.auth_seq_id_2 14 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 P _pdbx_validate_rmsd_angle.auth_asym_id_3 C _pdbx_validate_rmsd_angle.auth_comp_id_3 DC _pdbx_validate_rmsd_angle.auth_seq_id_3 15 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 134.52 _pdbx_validate_rmsd_angle.angle_target_value 119.70 _pdbx_validate_rmsd_angle.angle_deviation 14.82 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.20 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y,x-y,z 3 -x+y,-x,z 4 x+1/3,y+2/3,z+2/3 5 -y+1/3,x-y+2/3,z+2/3 6 -x+y+1/3,-x+2/3,z+2/3 7 x+2/3,y+1/3,z+1/3 8 -y+2/3,x-y+1/3,z+1/3 9 -x+y+2/3,-x+1/3,z+1/3 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 14.765 27.031 -33.019 9.48074964599 8.28792653428 11.1089406405 -1.63688571589 -1.0739652859 1.41381306599 6.69587913531 0.0171718276651 1.85537252482 0.768479551487 3.49260901775 0.401141491162 -3.13256045007 2.55677089869 -1.74028191551 0.399746270944 -0.336569545179 -4.86201598152 -0.491203113292 4.26016955027 -4.99849102454 'X-RAY DIFFRACTION' 2 ? refined 28.935 30.664 -39.126 15.6927567842 8.16567199299 7.68827780758 -0.803498122693 -2.89779202097 3.1963584891 0.329990589858 0.723618114537 0.83949344922 0.210722913477 0.203631936962 0.593603164146 -2.69323055442 2.5859139359 5.91713141077 -2.68280954789 -2.42097232074 -2.64888658608 -1.36789254543 0.36837904243 -1.11309718177 'X-RAY DIFFRACTION' 3 ? refined 27.456 51.799 -34.766 8.78963265579 6.45407595831 11.3223438865 -1.4641636581 0.408907367267 0.0781905306155 1.66550089191 5.13673583003 3.20844617681 -2.9381599254 -2.2855819847 4.14657192914 3.04178731267 0.306604854245 2.469046015 -0.745246449815 -5.95330527958 -0.965718136253 1.56496697382 -4.52657101915 3.06931642347 'X-RAY DIFFRACTION' 4 ? refined 23.585 46.068 -24.460 8.12177057177 6.17637734055 12.7760027933 -1.48694099601 -2.08593277593 0.314943374109 3.803356218 1.83703519118 3.9177947015 -2.57540623017 -3.63210214281 2.58973016218 -2.2649280145 5.51992318463 2.12660652097 3.78743039501 -0.677461621211 -0.433575702606 -1.64399082624 -2.72455031157 -1.37626889825 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 D 1 D 24 '( CHAIN D AND RESID 1:24 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 1 A 21 '( CHAIN A AND RESID 1:21 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 B 1 B 17 '( CHAIN B AND RESID 1:17 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 C 1 C 20 '( CHAIN C AND RESID 1:20 )' ? ? ? ? ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8SJV 'double helix' 8SJV 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 2 1_555 D DT 24 1_555 0.090 -0.185 -0.744 -5.626 -5.149 -1.172 1 A_DA2:DT24_D A 2 ? D 24 ? 20 1 1 A DC 3 1_555 D DG 23 1_555 0.175 -0.244 -0.719 -6.813 3.541 -0.876 2 A_DC3:DG23_D A 3 ? D 23 ? 19 1 1 A DA 4 1_555 D DT 22 1_555 0.098 -0.205 -1.011 -9.584 -11.683 -1.226 3 A_DA4:DT22_D A 4 ? D 22 ? 20 1 1 A DT 5 1_555 D DA 21 1_555 -0.050 -0.508 -1.273 -12.098 -6.193 4.434 4 A_DT5:DA21_D A 5 ? D 21 ? 20 1 1 A DC 6 1_555 D DG 20 1_555 0.164 -0.302 -0.929 -7.345 1.999 -1.784 5 A_DC6:DG20_D A 6 ? D 20 ? 19 1 1 A DA 7 1_555 D DT 19 1_555 0.109 -0.105 -0.090 -6.521 3.938 -2.641 6 A_DA7:DT19_D A 7 ? D 19 ? 20 1 1 A DC 8 1_555 D DG 18 1_555 0.184 -0.126 0.021 0.591 3.095 -1.108 7 A_DC8:DG18_D A 8 ? D 18 ? 19 1 1 A DA 9 1_555 D DT 17 1_555 0.080 -0.133 0.308 -0.309 -2.130 -0.482 8 A_DA9:DT17_D A 9 ? D 17 ? 20 1 1 A DG 10 1_555 D DC 16 1_555 -0.165 -0.155 0.293 -0.615 -2.479 -1.145 9 A_DG10:DC16_D A 10 ? D 16 ? 19 1 1 A DT 11 1_555 D DA 15 1_555 -0.126 -0.075 0.296 -2.258 -2.109 -2.970 10 A_DT11:DA15_D A 11 ? D 15 ? 20 1 1 A DG 12 1_555 D DC 14 1_555 -0.181 -0.202 0.516 -3.643 -1.617 -1.691 11 A_DG12:DC14_D A 12 ? D 14 ? 19 1 1 A DG 13 1_555 D DC 13 1_555 -0.189 -0.126 0.040 -3.083 1.500 -0.853 12 A_DG13:DC13_D A 13 ? D 13 ? 19 1 1 A DA 14 1_555 B DT 10 1_555 0.099 -0.096 0.064 -5.486 -8.326 0.795 13 A_DA14:DT10_B A 14 ? B 10 ? 20 1 1 A DC 15 1_555 B DG 9 1_555 0.172 -0.189 -0.575 -5.003 -7.466 0.457 14 A_DC15:DG9_B A 15 ? B 9 ? 19 1 1 A DT 16 1_555 B DA 8 1_555 -0.071 -0.108 -0.282 -2.256 -7.011 2.057 15 A_DT16:DA8_B A 16 ? B 8 ? 20 1 1 A DA 17 1_555 B DT 7 1_555 0.122 -0.103 -0.617 -9.511 -2.483 -3.093 16 A_DA17:DT7_B A 17 ? B 7 ? 20 1 1 A DC 18 1_555 B DG 6 1_555 0.169 -0.158 -0.382 -4.842 2.938 -1.620 17 A_DC18:DG6_B A 18 ? B 6 ? 19 1 1 A DA 19 1_555 B DT 5 1_555 0.080 -0.114 0.049 -3.103 -4.026 0.269 18 A_DA19:DT5_B A 19 ? B 5 ? 20 1 1 A DA 20 1_555 B DT 4 1_555 0.148 -0.240 -1.026 -5.979 -1.166 -1.129 19 A_DA20:DT4_B A 20 ? B 4 ? 20 1 1 A DG 21 1_555 B DC 3 1_555 -0.150 -0.279 -0.979 -2.324 0.851 -0.148 20 A_DG21:DC3_B A 21 ? B 3 ? 19 1 1 C DA 3 1_555 B DT 17 1_555 0.120 -0.201 0.829 -0.222 -0.339 -2.906 21 C_DA3:DT17_B C 3 ? B 17 ? 20 1 1 C DC 4 1_555 B DG 16 1_555 0.188 -0.173 0.461 2.980 1.232 0.299 22 C_DC4:DG16_B C 4 ? B 16 ? 19 1 1 C DA 5 1_555 B DT 15 1_555 0.102 -0.131 -0.404 5.702 1.297 -2.676 23 C_DA5:DT15_B C 5 ? B 15 ? 20 1 1 C DC 6 1_555 B DG 14 1_555 0.140 -0.325 -1.321 11.309 -1.587 -0.971 24 C_DC6:DG14_B C 6 ? B 14 ? 19 1 1 C DT 7 1_555 B DA 13 1_555 -0.295 -0.413 -1.739 13.443 -6.196 -5.391 25 C_DT7:DA13_B C 7 ? B 13 ? 20 1 1 C DC 8 1_555 B DG 12 1_555 0.172 -0.253 -1.240 13.679 -5.028 1.569 26 C_DC8:DG12_B C 8 ? B 12 ? 19 1 1 C DC 9 1_555 B DG 11 1_555 0.249 -0.302 -1.342 15.370 -10.611 4.023 27 C_DC9:DG11_B C 9 ? B 11 ? 19 1 1 C DT 10 1_555 D DA 12 1_555 -0.253 -0.035 0.010 1.754 -6.108 -9.666 28 C_DT10:DA12_D C 10 ? D 12 ? 20 1 1 C DG 11 1_555 D DC 11 1_555 -0.244 -0.121 -0.177 -0.948 -11.936 2.962 29 C_DG11:DC11_D C 11 ? D 11 ? 19 1 1 C DA 12 1_555 D DT 10 1_555 0.146 -0.108 -0.644 -5.474 -13.594 -1.263 30 C_DA12:DT10_D C 12 ? D 10 ? 20 1 1 C DG 13 1_555 D DC 9 1_555 -0.305 -0.207 -0.442 -3.571 -15.589 4.256 31 C_DG13:DC9_D C 13 ? D 9 ? 19 1 1 C DA 14 1_555 D DT 8 1_555 0.106 -0.188 -0.486 -9.747 -15.736 7.270 32 C_DA14:DT8_D C 14 ? D 8 ? 20 1 1 C DC 15 1_555 D DG 7 1_555 0.191 -0.155 0.201 -0.840 -10.483 -0.107 33 C_DC15:DG7_D C 15 ? D 7 ? 19 1 1 C DT 16 1_555 D DA 6 1_555 1.278 0.475 0.050 3.044 -17.092 8.046 34 C_DT16:DA6_D C 16 ? D 6 ? ? ? 1 C DA 17 1_555 D DT 5 1_555 0.084 -0.099 -0.584 -10.941 -13.842 -1.418 35 C_DA17:DT5_D C 17 ? D 5 ? 20 1 1 C DC 18 1_555 D DG 4 1_555 0.187 -0.128 -0.373 -3.159 -9.463 -0.348 36 C_DC18:DG4_D C 18 ? D 4 ? 19 1 1 C DA 19 1_555 D DT 3 1_555 0.148 -0.248 0.653 -0.071 -16.259 -5.178 37 C_DA19:DT3_D C 19 ? D 3 ? 20 1 1 C DA 20 1_555 D DT 2 1_555 0.096 -0.034 -0.278 -10.087 -15.251 -3.459 38 C_DA20:DT2_D C 20 ? D 2 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 2 1_555 D DT 24 1_555 A DC 3 1_555 D DG 23 1_555 -0.141 -1.193 3.282 -1.976 1.286 33.947 -2.243 -0.073 3.239 2.199 3.380 34.027 1 AA_DA2DC3:DG23DT24_DD A 2 ? D 24 ? A 3 ? D 23 ? 1 A DC 3 1_555 D DG 23 1_555 A DA 4 1_555 D DT 22 1_555 0.557 0.713 3.354 -0.612 19.379 33.787 -1.505 -0.919 3.270 30.434 0.960 38.814 2 AA_DC3DA4:DT22DG23_DD A 3 ? D 23 ? A 4 ? D 22 ? 1 A DA 4 1_555 D DT 22 1_555 A DT 5 1_555 D DA 21 1_555 0.278 -0.511 3.590 -0.292 0.209 34.240 -0.904 -0.523 3.584 0.355 0.496 34.242 3 AA_DA4DT5:DA21DT22_DD A 4 ? D 22 ? A 5 ? D 21 ? 1 A DT 5 1_555 D DA 21 1_555 A DC 6 1_555 D DG 20 1_555 -0.421 1.140 3.767 -9.297 0.690 38.930 1.575 -0.634 3.784 1.017 13.711 39.989 4 AA_DT5DC6:DG20DA21_DD A 5 ? D 21 ? A 6 ? D 20 ? 1 A DC 6 1_555 D DG 20 1_555 A DA 7 1_555 D DT 19 1_555 0.025 0.318 3.349 -2.346 4.308 41.209 -0.022 -0.292 3.358 6.095 3.320 41.488 5 AA_DC6DA7:DT19DG20_DD A 6 ? D 20 ? A 7 ? D 19 ? 1 A DA 7 1_555 D DT 19 1_555 A DC 8 1_555 D DG 18 1_555 -0.096 -0.239 3.323 -3.196 4.610 32.957 -1.188 -0.369 3.255 8.053 5.584 33.418 6 AA_DA7DC8:DG18DT19_DD A 7 ? D 19 ? A 8 ? D 18 ? 1 A DC 8 1_555 D DG 18 1_555 A DA 9 1_555 D DT 17 1_555 0.960 -0.324 2.980 1.348 4.212 35.213 -1.093 -1.395 2.956 6.929 -2.218 35.481 7 AA_DC8DA9:DT17DG18_DD A 8 ? D 18 ? A 9 ? D 17 ? 1 A DA 9 1_555 D DT 17 1_555 A DG 10 1_555 D DC 16 1_555 -0.523 -0.529 3.258 -0.964 0.204 33.810 -0.943 0.744 3.268 0.351 1.657 33.824 8 AA_DA9DG10:DC16DT17_DD A 9 ? D 17 ? A 10 ? D 16 ? 1 A DG 10 1_555 D DC 16 1_555 A DT 11 1_555 D DA 15 1_555 0.635 -0.658 3.370 0.468 -0.764 35.298 -0.968 -0.976 3.391 -1.260 -0.771 35.309 9 AA_DG10DT11:DA15DC16_DD A 10 ? D 16 ? A 11 ? D 15 ? 1 A DT 11 1_555 D DA 15 1_555 A DG 12 1_555 D DC 14 1_555 -0.112 -0.399 3.041 -3.174 2.334 41.813 -0.782 -0.149 3.015 3.261 4.435 41.990 10 AA_DT11DG12:DC14DA15_DD A 11 ? D 15 ? A 12 ? D 14 ? 1 A DG 12 1_555 D DC 14 1_555 A DG 13 1_555 D DC 13 1_555 0.215 -0.379 3.437 -3.188 3.134 34.882 -1.115 -0.853 3.359 5.201 5.292 35.158 11 AA_DG12DG13:DC13DC14_DD A 12 ? D 14 ? A 13 ? D 13 ? 1 A DG 13 1_555 D DC 13 1_555 A DA 14 1_555 B DT 10 1_555 0.621 -0.415 3.192 -1.416 9.706 35.534 -1.920 -1.167 2.955 15.542 2.268 36.821 12 AA_DG13DA14:DT10DC13_BD A 13 ? D 13 ? A 14 ? B 10 ? 1 A DA 14 1_555 B DT 10 1_555 A DC 15 1_555 B DG 9 1_555 -1.350 0.468 3.418 -3.949 -5.116 41.751 1.204 1.446 3.448 -7.126 5.502 42.226 13 AA_DA14DC15:DG9DT10_BB A 14 ? B 10 ? A 15 ? B 9 ? 1 A DC 15 1_555 B DG 9 1_555 A DT 16 1_555 B DA 8 1_555 0.387 -0.237 3.151 -1.879 -0.212 29.540 -0.422 -1.140 3.122 -0.415 3.681 29.599 14 AA_DC15DT16:DA8DG9_BB A 15 ? B 9 ? A 16 ? B 8 ? 1 A DT 16 1_555 B DA 8 1_555 A DA 17 1_555 B DT 7 1_555 -1.128 0.584 3.453 -4.851 2.827 39.179 0.504 1.050 3.594 4.190 7.189 39.563 15 AA_DT16DA17:DT7DA8_BB A 16 ? B 8 ? A 17 ? B 7 ? 1 A DA 17 1_555 B DT 7 1_555 A DC 18 1_555 B DG 6 1_555 0.009 -0.507 3.167 -3.350 1.763 32.603 -1.189 -0.570 3.119 3.127 5.942 32.816 16 AA_DA17DC18:DG6DT7_BB A 17 ? B 7 ? A 18 ? B 6 ? 1 A DC 18 1_555 B DG 6 1_555 A DA 19 1_555 B DT 5 1_555 0.906 -0.242 2.969 -2.301 9.934 32.429 -1.830 -1.879 2.711 17.263 3.999 33.953 17 AA_DC18DA19:DT5DG6_BB A 18 ? B 6 ? A 19 ? B 5 ? 1 A DA 19 1_555 B DT 5 1_555 A DA 20 1_555 B DT 4 1_555 -1.278 0.038 3.807 -3.016 1.515 34.591 -0.210 1.596 3.899 2.540 5.057 34.750 18 AA_DA19DA20:DT4DT5_BB A 19 ? B 5 ? A 20 ? B 4 ? 1 A DA 20 1_555 B DT 4 1_555 A DG 21 1_555 B DC 3 1_555 -0.050 -0.369 3.312 -1.440 2.344 29.902 -1.198 -0.202 3.273 4.531 2.783 30.026 19 AA_DA20DG21:DC3DT4_BB A 20 ? B 4 ? A 21 ? B 3 ? 1 C DA 3 1_555 B DT 17 1_555 C DC 4 1_555 B DG 16 1_555 0.227 -0.565 3.260 -0.411 2.655 31.230 -1.541 -0.496 3.199 4.921 0.762 31.342 20 CC_DA3DC4:DG16DT17_BB C 3 ? B 17 ? C 4 ? B 16 ? 1 C DC 4 1_555 B DG 16 1_555 C DA 5 1_555 B DT 15 1_555 -0.684 -0.647 2.927 3.659 5.055 39.039 -1.477 1.387 2.753 7.506 -5.434 39.515 21 CC_DC4DA5:DT15DG16_BB C 4 ? B 16 ? C 5 ? B 15 ? 1 C DA 5 1_555 B DT 15 1_555 C DC 6 1_555 B DG 14 1_555 0.057 -0.588 3.435 3.441 1.609 36.769 -1.154 0.395 3.398 2.542 -5.438 36.958 22 CC_DA5DC6:DG14DT15_BB C 5 ? B 15 ? C 6 ? B 14 ? 1 C DC 6 1_555 B DG 14 1_555 C DT 7 1_555 B DA 13 1_555 0.172 0.400 3.212 4.234 0.724 31.962 0.594 0.434 3.216 1.308 -7.646 32.242 23 CC_DC6DT7:DA13DG14_BB C 6 ? B 14 ? C 7 ? B 13 ? 1 C DT 7 1_555 B DA 13 1_555 C DC 8 1_555 B DG 12 1_555 1.481 1.378 3.492 6.260 -1.089 42.132 2.018 -1.347 3.630 -1.505 -8.649 42.587 24 CC_DT7DC8:DG12DA13_BB C 7 ? B 13 ? C 8 ? B 12 ? 1 C DC 8 1_555 B DG 12 1_555 C DC 9 1_555 B DG 11 1_555 0.807 0.575 3.091 3.419 -0.232 37.124 0.929 -0.831 3.147 -0.363 -5.357 37.276 25 CC_DC8DC9:DG11DG12_BB C 8 ? B 12 ? C 9 ? B 11 ? 1 C DC 9 1_555 B DG 11 1_555 C DT 10 1_555 D DA 12 1_555 -3.990 -2.195 3.770 -18.770 37.618 17.668 -6.720 3.229 1.330 61.040 30.457 45.446 26 CC_DC9DT10:DA12DG11_DB C 9 ? B 11 ? C 10 ? D 12 ? 1 C DT 10 1_555 D DA 12 1_555 C DG 11 1_555 D DC 11 1_555 2.064 0.081 3.316 -0.115 9.211 34.810 -1.204 -3.359 3.226 15.073 0.189 35.972 27 CC_DT10DG11:DC11DA12_DD C 10 ? D 12 ? C 11 ? D 11 ? 1 C DG 11 1_555 D DC 11 1_555 C DA 12 1_555 D DT 10 1_555 -1.445 0.863 3.323 -3.278 -0.295 34.996 1.474 1.887 3.433 -0.490 5.436 35.145 28 CC_DG11DA12:DT10DC11_DD C 11 ? D 11 ? C 12 ? D 10 ? 1 C DA 12 1_555 D DT 10 1_555 C DG 13 1_555 D DC 9 1_555 -0.295 1.106 2.962 -5.057 2.572 28.017 1.698 -0.469 3.054 5.245 10.311 28.574 29 CC_DA12DG13:DC9DT10_DD C 12 ? D 10 ? C 13 ? D 9 ? 1 C DG 13 1_555 D DC 9 1_555 C DA 14 1_555 D DT 8 1_555 -0.292 3.636 3.131 -3.189 -1.254 41.626 5.226 0.093 3.038 -1.761 4.478 41.761 30 CC_DG13DA14:DT8DC9_DD C 13 ? D 9 ? C 14 ? D 8 ? 1 C DA 14 1_555 D DT 8 1_555 C DC 15 1_555 D DG 7 1_555 -0.171 -0.293 2.863 -9.124 -1.866 34.650 -0.239 -0.882 2.827 -3.064 14.987 35.842 31 CC_DA14DC15:DG7DT8_DD C 14 ? D 8 ? C 15 ? D 7 ? 1 C DC 15 1_555 D DG 7 1_555 C DT 16 1_555 D DA 6 1_555 0.058 -0.943 3.149 -2.925 -0.563 28.750 -1.769 -0.743 3.145 -1.130 5.870 28.901 32 CC_DC15DT16:DA6DG7_DD C 15 ? D 7 ? C 16 ? D 6 ? 1 C DT 16 1_555 D DA 6 1_555 C DA 17 1_555 D DT 5 1_555 -0.566 -0.946 2.926 3.385 29.352 26.237 -4.113 1.153 1.232 48.957 -5.646 39.319 33 CC_DT16DA17:DT5DA6_DD C 16 ? D 6 ? C 17 ? D 5 ? 1 C DA 17 1_555 D DT 5 1_555 C DC 18 1_555 D DG 4 1_555 -0.200 0.042 3.017 -7.088 -0.229 34.288 0.102 -0.659 2.997 -0.383 11.865 34.992 34 CC_DA17DC18:DG4DT5_DD C 17 ? D 5 ? C 18 ? D 4 ? 1 C DC 18 1_555 D DG 4 1_555 C DA 19 1_555 D DT 3 1_555 0.089 -0.944 2.924 -13.245 12.345 35.646 -2.599 -1.433 2.315 18.750 20.117 39.848 35 CC_DC18DA19:DT3DG4_DD C 18 ? D 4 ? C 19 ? D 3 ? 1 C DA 19 1_555 D DT 3 1_555 C DA 20 1_555 D DT 2 1_555 -0.736 -0.183 3.521 -2.947 0.329 39.106 -0.315 0.715 3.563 0.491 4.395 39.214 36 CC_DA19DA20:DT2DT3_DD C 19 ? D 3 ? C 20 ? D 2 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Office of Naval Research (ONR)' 'United States' N000141912596 1 'Department of Energy (DOE, United States)' 'United States' DE-SC0007991 2 'National Science Foundation (NSF, United States)' 'United States' 2106790 3 'Human Frontier Science Program (HFSP)' France RPG0010/2017 4 'National Science Foundation (NSF, United States)' 'United States' DMR-1420073 5 'National Aeronautics and Space Administration (NASA, United States)' 'United States' '2020 NASA Center Innovation Fund' 6 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5W6W _pdbx_initial_refinement_model.details 'tensegrity triangle' # _space_group.name_H-M_alt 'H 3' _space_group.name_Hall 'H 3' _space_group.IT_number 146 _space_group.crystal_system trigonal _space_group.id 1 # _atom_sites.entry_id 8SJV _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.004436 _atom_sites.fract_transf_matrix[1][2] 0.002561 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.005123 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011322 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 5.96793 ? ? ? 14.89577 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 6.96715 ? ? ? 11.43723 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 7.96527 ? ? ? 9.05267 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 14.90797 ? ? ? 11.91318 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_