HEADER VIRAL PROTEIN 26-APR-23 8SMG TITLE STRUCTURE OF SPO1 PHAGE TAD2 IN COMPLEX WITH 1''-2' GCADPR COMPND MOL_ID: 1; COMPND 2 MOLECULE: GP34.65; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: OKUBOVIRUS; SOURCE 3 ORGANISM_TAXID: 1857845; SOURCE 4 GENE: 34.65; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GCADPR, THOERIS, ANTI-PHAGE, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.LU,E.YIRMIYA,A.LEAVITT,C.AVRAHAM,I.OSTERMAN,J.GARB,S.P.ANTINE, AUTHOR 2 S.E.MOONEY,S.J.HOBBS,G.AMITAI,R.SOREK,P.J.KRANZUSCH REVDAT 3 24-JAN-24 8SMG 1 JRNL REVDAT 2 13-DEC-23 8SMG 1 JRNL REVDAT 1 22-NOV-23 8SMG 0 JRNL AUTH E.YIRMIYA,A.LEAVITT,A.LU,A.E.RAGUCCI,C.AVRAHAM,I.OSTERMAN, JRNL AUTH 2 J.GARB,S.P.ANTINE,S.E.MOONEY,S.J.HOBBS,P.J.KRANZUSCH, JRNL AUTH 3 G.AMITAI,R.SOREK JRNL TITL PHAGES OVERCOME BACTERIAL IMMUNITY VIA DIVERSE ANTI-DEFENCE JRNL TITL 2 PROTEINS. JRNL REF NATURE V. 625 352 2024 JRNL REFN ESSN 1476-4687 JRNL PMID 37992756 JRNL DOI 10.1038/S41586-023-06869-W REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.29 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 15019 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1503 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.2900 - 4.6700 1.00 1353 151 0.1990 0.2241 REMARK 3 2 4.6700 - 3.7100 1.00 1266 140 0.1760 0.1925 REMARK 3 3 3.7100 - 3.2400 1.00 1242 138 0.2287 0.2497 REMARK 3 4 3.2400 - 2.9400 1.00 1231 137 0.2543 0.2740 REMARK 3 5 2.9400 - 2.7300 1.00 1225 136 0.2884 0.3521 REMARK 3 6 2.7300 - 2.5700 1.00 1203 135 0.2725 0.3343 REMARK 3 7 2.5700 - 2.4400 1.00 1212 134 0.2983 0.2907 REMARK 3 8 2.4400 - 2.3400 1.00 1203 134 0.2728 0.3012 REMARK 3 9 2.3400 - 2.2500 1.00 1205 134 0.3074 0.4059 REMARK 3 10 2.2500 - 2.1700 1.00 1184 131 0.3029 0.3308 REMARK 3 11 2.1700 - 2.1000 0.99 1192 133 0.3407 0.3731 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.287 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.958 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 53.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 71.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 1354 REMARK 3 ANGLE : 0.456 1835 REMARK 3 CHIRALITY : 0.040 196 REMARK 3 PLANARITY : 0.003 226 REMARK 3 DIHEDRAL : 11.685 463 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.1026 23.6891 -4.1864 REMARK 3 T TENSOR REMARK 3 T11: 0.5526 T22: 0.9198 REMARK 3 T33: 0.5057 T12: -0.0753 REMARK 3 T13: 0.0051 T23: -0.0182 REMARK 3 L TENSOR REMARK 3 L11: 1.1508 L22: 0.7973 REMARK 3 L33: 0.7541 L12: -0.2819 REMARK 3 L13: 1.2129 L23: -0.4263 REMARK 3 S TENSOR REMARK 3 S11: 0.2810 S12: -1.6654 S13: 0.6460 REMARK 3 S21: 0.3734 S22: -0.1787 S23: -0.1221 REMARK 3 S31: -0.4723 S32: 0.0181 S33: 0.0015 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 37 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): -53.8794 21.8900 -10.9707 REMARK 3 T TENSOR REMARK 3 T11: 0.6664 T22: 0.8111 REMARK 3 T33: 0.7270 T12: -0.0211 REMARK 3 T13: -0.0082 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 0.5383 L22: -0.0589 REMARK 3 L33: 0.1642 L12: 0.0198 REMARK 3 L13: 0.3894 L23: 0.0602 REMARK 3 S TENSOR REMARK 3 S11: 0.4454 S12: -1.4735 S13: 0.8056 REMARK 3 S21: -0.1224 S22: -0.4197 S23: -0.5252 REMARK 3 S31: 0.1207 S32: -0.2259 S33: 0.0007 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 52 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): -49.4101 14.7137 -14.0453 REMARK 3 T TENSOR REMARK 3 T11: 0.6743 T22: 0.8781 REMARK 3 T33: 0.9639 T12: 0.0227 REMARK 3 T13: -0.0056 T23: 0.0452 REMARK 3 L TENSOR REMARK 3 L11: 0.1146 L22: 0.1674 REMARK 3 L33: 0.2440 L12: -0.0357 REMARK 3 L13: 0.1345 L23: 0.1068 REMARK 3 S TENSOR REMARK 3 S11: 0.0476 S12: 0.2303 S13: -1.9735 REMARK 3 S21: -0.0375 S22: -0.1001 S23: 0.6261 REMARK 3 S31: 1.1548 S32: -0.4188 S33: -0.0003 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 60 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.8650 29.3708 -14.1234 REMARK 3 T TENSOR REMARK 3 T11: 0.5222 T22: 0.6249 REMARK 3 T33: 0.7020 T12: 0.0152 REMARK 3 T13: -0.0229 T23: 0.0977 REMARK 3 L TENSOR REMARK 3 L11: 0.1288 L22: 0.4045 REMARK 3 L33: 0.6630 L12: -0.2032 REMARK 3 L13: 0.3314 L23: -0.5696 REMARK 3 S TENSOR REMARK 3 S11: 0.0160 S12: -0.3574 S13: 1.6715 REMARK 3 S21: 0.5423 S22: -0.3563 S23: 0.1252 REMARK 3 S31: -0.6390 S32: 0.5209 S33: 0.0006 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 70 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.5278 22.6423 -15.0903 REMARK 3 T TENSOR REMARK 3 T11: 0.5062 T22: 0.6369 REMARK 3 T33: 0.6593 T12: 0.1196 REMARK 3 T13: 0.0436 T23: 0.0432 REMARK 3 L TENSOR REMARK 3 L11: 0.1346 L22: 0.0809 REMARK 3 L33: 0.0023 L12: 0.0579 REMARK 3 L13: 0.0540 L23: -0.0052 REMARK 3 S TENSOR REMARK 3 S11: 0.2082 S12: 0.2156 S13: 0.3239 REMARK 3 S21: -0.6805 S22: -0.6503 S23: -0.4921 REMARK 3 S31: 0.1794 S32: 0.3003 S33: -0.0013 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 77 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.0324 20.8241 -4.0517 REMARK 3 T TENSOR REMARK 3 T11: 0.5907 T22: 0.8567 REMARK 3 T33: 0.6384 T12: -0.0426 REMARK 3 T13: -0.0834 T23: 0.0370 REMARK 3 L TENSOR REMARK 3 L11: 0.4484 L22: 1.2780 REMARK 3 L33: 0.1657 L12: -0.2915 REMARK 3 L13: 0.1746 L23: 0.1787 REMARK 3 S TENSOR REMARK 3 S11: 0.1526 S12: -0.6105 S13: 0.7655 REMARK 3 S21: 0.1696 S22: 0.2294 S23: -1.6315 REMARK 3 S31: -0.0956 S32: 0.3241 S33: 0.0262 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 4 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.0924 2.4576 -8.9432 REMARK 3 T TENSOR REMARK 3 T11: 0.5298 T22: 0.6345 REMARK 3 T33: 0.7572 T12: 0.0145 REMARK 3 T13: 0.0552 T23: 0.3236 REMARK 3 L TENSOR REMARK 3 L11: 1.2605 L22: 2.9068 REMARK 3 L33: 6.5475 L12: -1.0699 REMARK 3 L13: -0.6765 L23: 0.1822 REMARK 3 S TENSOR REMARK 3 S11: -0.2242 S12: -0.7008 S13: -1.1753 REMARK 3 S21: -0.0624 S22: -0.5125 S23: -0.1138 REMARK 3 S31: 0.2445 S32: 0.0970 S33: -2.5021 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 36 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.9972 11.7721 -11.8282 REMARK 3 T TENSOR REMARK 3 T11: 0.7924 T22: 1.4609 REMARK 3 T33: 1.5219 T12: -0.1886 REMARK 3 T13: -0.1497 T23: 0.4737 REMARK 3 L TENSOR REMARK 3 L11: 0.0596 L22: 0.0147 REMARK 3 L33: 2.4359 L12: 0.0028 REMARK 3 L13: -0.3753 L23: 0.2391 REMARK 3 S TENSOR REMARK 3 S11: 0.9659 S12: -0.5694 S13: -1.2382 REMARK 3 S21: 0.4286 S22: 0.0747 S23: -1.1309 REMARK 3 S31: -0.6164 S32: 0.1671 S33: 0.0615 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 60 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.5046 4.8294 -14.3171 REMARK 3 T TENSOR REMARK 3 T11: 0.4472 T22: 0.5243 REMARK 3 T33: 0.6690 T12: 0.0404 REMARK 3 T13: 0.0703 T23: 0.1619 REMARK 3 L TENSOR REMARK 3 L11: 1.9842 L22: 2.0820 REMARK 3 L33: 1.9078 L12: 0.9945 REMARK 3 L13: 0.9605 L23: -1.7375 REMARK 3 S TENSOR REMARK 3 S11: 0.1274 S12: -0.3963 S13: -0.8072 REMARK 3 S21: -0.0133 S22: -0.3594 S23: -0.1908 REMARK 3 S31: 0.1886 S32: 0.1734 S33: -0.0415 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8SMG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-APR-23. REMARK 100 THE DEPOSITION ID IS D_1000274086. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-DEC-22 REMARK 200 TEMPERATURE (KELVIN) : 193 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15065 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 39.290 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 27.50 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 26.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: 8SME REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS-HCL, GLYCEROL, AMMONIUM SULFATE, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 36.17850 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 36.17850 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 36.17850 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 36.17850 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 36.17850 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 36.17850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -36.17850 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 THR A 3 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 THR B 3 REMARK 465 ASP B 43 REMARK 465 PHE B 44 REMARK 465 GLY B 45 REMARK 465 PHE B 46 REMARK 465 GLY B 47 REMARK 465 PHE B 48 REMARK 465 GLY B 49 REMARK 465 GLU B 50 REMARK 465 TYR B 51 REMARK 465 ILE B 52 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 53 -58.21 63.09 REMARK 500 REMARK 500 REMARK: NULL DBREF 8SMG A 1 89 UNP B6V311 B6V311_BPSP1 1 89 DBREF 8SMG B 1 89 UNP B6V311 B6V311_BPSP1 1 89 SEQADV 8SMG SER A 0 UNP B6V311 EXPRESSION TAG SEQADV 8SMG SER B 0 UNP B6V311 EXPRESSION TAG SEQRES 1 A 90 SER MET LYS THR LYS MET SER PHE GLY GLU ALA LEU GLU SEQRES 2 A 90 VAL LEU LYS GLN GLY MET GLN VAL TYR ARG SER GLY TRP SEQRES 3 A 90 ASN GLY LYS ASN MET PHE LEU PHE LEU LYS SER SER ASP SEQRES 4 A 90 ALA LEU ALA SER ASP PHE GLY PHE GLY PHE GLY GLU TYR SEQRES 5 A 90 ILE ASN GLU PRO VAL PHE GLY ASN ILE ILE PHE ILE LYS SEQRES 6 A 90 THR ALA ASP ASN LYS ILE HIS ALA TRP VAL PRO SER GLN SEQRES 7 A 90 THR ASP VAL LEU ALA GLU ASP TRP ASP ILE VAL SER SEQRES 1 B 90 SER MET LYS THR LYS MET SER PHE GLY GLU ALA LEU GLU SEQRES 2 B 90 VAL LEU LYS GLN GLY MET GLN VAL TYR ARG SER GLY TRP SEQRES 3 B 90 ASN GLY LYS ASN MET PHE LEU PHE LEU LYS SER SER ASP SEQRES 4 B 90 ALA LEU ALA SER ASP PHE GLY PHE GLY PHE GLY GLU TYR SEQRES 5 B 90 ILE ASN GLU PRO VAL PHE GLY ASN ILE ILE PHE ILE LYS SEQRES 6 B 90 THR ALA ASP ASN LYS ILE HIS ALA TRP VAL PRO SER GLN SEQRES 7 B 90 THR ASP VAL LEU ALA GLU ASP TRP ASP ILE VAL SER HET MF6 B 101 35 HETNAM MF6 (1S,3R,4R,6R,9S,11R,14R,15S,16R,18R)-4-(6-AMINO-9H- HETNAM 2 MF6 PURIN-9-YL)-9,11,15,16,18-PENTAHYDROXY-2,5,8,10,12,17- HETNAM 3 MF6 HEXAOXA-9LAMBDA~5~,11LAMBDA~5~- HETNAM 4 MF6 DIPHOSPHATRICYCLO[12.2.1.1~3,6~]OCTADECANE-9,11-DIONE HETSYN MF6 1'-2' GCADPR FORMUL 3 MF6 C15 H21 N5 O13 P2 FORMUL 4 HOH *27(H2 O) HELIX 1 AA1 SER A 6 GLN A 16 1 11 HELIX 2 AA2 SER A 36 PHE A 44 1 9 HELIX 3 AA3 PHE A 48 ILE A 52 5 5 HELIX 4 AA4 SER A 76 ALA A 82 1 7 HELIX 5 AA5 SER B 6 GLN B 16 1 11 HELIX 6 AA6 SER B 36 SER B 42 1 7 HELIX 7 AA7 SER B 76 ALA B 82 1 7 SHEET 1 AA1 2 VAL A 20 ARG A 22 0 SHEET 2 AA1 2 TRP A 85 ILE A 87 -1 O ASP A 86 N TYR A 21 SHEET 1 AA2 3 PHE A 31 LYS A 35 0 SHEET 2 AA2 3 ILE A 60 LYS A 64 -1 O PHE A 62 N PHE A 33 SHEET 3 AA2 3 ILE A 70 ALA A 72 -1 O HIS A 71 N ILE A 63 SHEET 1 AA3 2 VAL B 20 ARG B 22 0 SHEET 2 AA3 2 TRP B 85 ILE B 87 -1 O ASP B 86 N TYR B 21 SHEET 1 AA4 3 PHE B 31 LYS B 35 0 SHEET 2 AA4 3 ILE B 60 LYS B 64 -1 O PHE B 62 N PHE B 33 SHEET 3 AA4 3 ILE B 70 ALA B 72 -1 O HIS B 71 N ILE B 63 CRYST1 108.064 108.064 72.357 90.00 90.00 120.00 P 63 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009254 0.005343 0.000000 0.00000 SCALE2 0.000000 0.010685 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013820 0.00000