HEADER IMMUNE SYSTEM 29-APR-23 8SOS TITLE HUMAN CD1D PRESENTING SPHINGOMYELIN C24:1 IN COMPLEX WITH VHH NANOBODY TITLE 2 1D17 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTIGEN-PRESENTING GLYCOPROTEIN CD1D; COMPND 3 CHAIN: A, E; COMPND 4 SYNONYM: R3G1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 8 CHAIN: B, F; COMPND 9 FRAGMENT: UNP RESIDUES 21-119; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: NANOBODY VHH ID17; COMPND 13 CHAIN: D, G; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CD1D; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HEK 293S; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PHLSEC; SOURCE 12 MOL_ID: 2; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 GENE: B2M, CDABP0092, HDCMA22P; SOURCE 17 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 18 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 20 EXPRESSION_SYSTEM_CELL_LINE: HEK 293S; SOURCE 21 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 22 EXPRESSION_SYSTEM_PLASMID: PHLSEC; SOURCE 23 MOL_ID: 3; SOURCE 24 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 25 ORGANISM_COMMON: LLAMA; SOURCE 26 ORGANISM_TAXID: 9844; SOURCE 27 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 28 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 29 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 30 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 31 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS CD1D, SPHINGOMYELIN, NKT, NANOBODY, VHH, 1D17, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR A.SHAHINE,J.ROSSJOHN REVDAT 1 13-DEC-23 8SOS 0 JRNL AUTH R.LAMERIS,A.SHAHINE,M.VETH,B.WESTERMAN,D.I.GODFREY, JRNL AUTH 2 D.LUTJE HULSIK,P.BROUWER,J.ROSSJOHN,T.D.DE GRUIJL, JRNL AUTH 3 H.J.VAN DER VLIET JRNL TITL ENHANCED CD1D PHOSPHATIDYLSERINE PRESENTATION USING A JRNL TITL 2 SINGLE-DOMAIN ANTIBODY PROMOTES IMMUNOMODULATORY CD1D-TIM-3 JRNL TITL 3 INTERACTIONS. JRNL REF J IMMUNOTHER CANCER V. 11 2023 JRNL REFN ESSN 2051-1426 JRNL PMID 38040419 JRNL DOI 10.1136/JITC-2023-007631 REMARK 2 REMARK 2 RESOLUTION. 2.33 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.20.1_4487) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.33 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.66 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 76985 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.180 REMARK 3 FREE R VALUE TEST SET COUNT : 3991 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.6600 - 7.1500 0.99 2698 136 0.2128 0.2004 REMARK 3 2 7.1500 - 5.6800 1.00 2570 154 0.2157 0.2338 REMARK 3 3 5.6800 - 4.9600 1.00 2602 128 0.1834 0.2233 REMARK 3 4 4.9600 - 4.5100 1.00 2533 134 0.1505 0.1633 REMARK 3 5 4.5100 - 4.1900 1.00 2558 139 0.1540 0.1836 REMARK 3 6 4.1900 - 3.9400 1.00 2519 140 0.1729 0.1769 REMARK 3 7 3.9400 - 3.7400 0.99 2511 145 0.1839 0.2070 REMARK 3 8 3.7400 - 3.5800 1.00 2513 145 0.2007 0.2105 REMARK 3 9 3.5800 - 3.4400 1.00 2524 132 0.2001 0.2324 REMARK 3 10 3.4400 - 3.3200 1.00 2487 151 0.2039 0.2044 REMARK 3 11 3.3200 - 3.2200 1.00 2487 163 0.1972 0.2377 REMARK 3 12 3.2200 - 3.1300 1.00 2531 132 0.2104 0.2180 REMARK 3 13 3.1300 - 3.0400 1.00 2511 144 0.2362 0.2838 REMARK 3 14 3.0400 - 2.9700 1.00 2458 179 0.2536 0.3216 REMARK 3 15 2.9700 - 2.9000 1.00 2499 119 0.2651 0.2950 REMARK 3 16 2.9000 - 2.8400 1.00 2467 149 0.2508 0.2679 REMARK 3 17 2.8400 - 2.7800 1.00 2541 128 0.2463 0.2604 REMARK 3 18 2.7800 - 2.7300 1.00 2484 121 0.2412 0.2589 REMARK 3 19 2.7300 - 2.6800 1.00 2557 105 0.2465 0.2478 REMARK 3 20 2.6800 - 2.6400 1.00 2480 160 0.2759 0.2833 REMARK 3 21 2.6400 - 2.5900 1.00 2511 127 0.2472 0.2787 REMARK 3 22 2.5900 - 2.5500 1.00 2499 131 0.2327 0.2644 REMARK 3 23 2.5500 - 2.5200 1.00 2453 159 0.2447 0.2758 REMARK 3 24 2.5200 - 2.4800 1.00 2489 128 0.2574 0.2766 REMARK 3 25 2.4800 - 2.4500 1.00 2538 103 0.2747 0.3059 REMARK 3 26 2.4500 - 2.4200 1.00 2453 164 0.2704 0.2822 REMARK 3 27 2.4200 - 2.3900 1.00 2490 129 0.2872 0.3225 REMARK 3 28 2.3900 - 2.3600 1.00 2522 126 0.3171 0.3782 REMARK 3 29 2.3600 - 2.3300 1.00 2509 120 0.3284 0.3834 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 8212 REMARK 3 ANGLE : 0.474 11153 REMARK 3 CHIRALITY : 0.041 1198 REMARK 3 PLANARITY : 0.003 1411 REMARK 3 DIHEDRAL : 13.342 2971 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 7 THROUGH 200 ) REMARK 3 ORIGIN FOR THE GROUP (A): 63.1726 2.5313 -22.9787 REMARK 3 T TENSOR REMARK 3 T11: 0.3223 T22: 0.2280 REMARK 3 T33: 0.2285 T12: -0.0017 REMARK 3 T13: -0.0163 T23: -0.0076 REMARK 3 L TENSOR REMARK 3 L11: 1.7547 L22: 4.1174 REMARK 3 L33: 1.0586 L12: 1.5916 REMARK 3 L13: -0.0045 L23: 0.5499 REMARK 3 S TENSOR REMARK 3 S11: -0.0794 S12: 0.1245 S13: 0.0130 REMARK 3 S21: -0.0461 S22: 0.1348 S23: -0.0093 REMARK 3 S31: -0.0039 S32: -0.0351 S33: -0.0754 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 201 THROUGH 278 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.4453 -19.6862 -18.8201 REMARK 3 T TENSOR REMARK 3 T11: 0.4557 T22: 0.6757 REMARK 3 T33: 0.6865 T12: -0.1284 REMARK 3 T13: 0.1143 T23: -0.1712 REMARK 3 L TENSOR REMARK 3 L11: 2.7646 L22: 4.0105 REMARK 3 L33: 4.0935 L12: -0.0808 REMARK 3 L13: 0.8338 L23: -0.5365 REMARK 3 S TENSOR REMARK 3 S11: -0.1792 S12: -0.2635 S13: -0.3265 REMARK 3 S21: 0.4663 S22: -0.1563 S23: 1.1557 REMARK 3 S31: 0.2633 S32: -1.4336 S33: 0.2274 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): 53.9051 -13.7500 -5.3228 REMARK 3 T TENSOR REMARK 3 T11: 0.3114 T22: 0.2190 REMARK 3 T33: 0.2452 T12: 0.0226 REMARK 3 T13: -0.0037 T23: 0.0413 REMARK 3 L TENSOR REMARK 3 L11: 3.4691 L22: 3.2457 REMARK 3 L33: 4.1716 L12: -0.7079 REMARK 3 L13: 0.4908 L23: -0.6205 REMARK 3 S TENSOR REMARK 3 S11: -0.0854 S12: -0.4133 S13: -0.3943 REMARK 3 S21: 0.1718 S22: 0.1488 S23: 0.2046 REMARK 3 S31: 0.3630 S32: -0.0815 S33: -0.0231 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): 87.3961 11.3993 -45.5166 REMARK 3 T TENSOR REMARK 3 T11: 0.6232 T22: 0.4190 REMARK 3 T33: 0.5149 T12: -0.1361 REMARK 3 T13: 0.2625 T23: -0.1689 REMARK 3 L TENSOR REMARK 3 L11: 2.1031 L22: 2.1713 REMARK 3 L33: 1.8205 L12: 0.8732 REMARK 3 L13: -0.6300 L23: -0.2833 REMARK 3 S TENSOR REMARK 3 S11: -0.3889 S12: 0.3470 S13: -0.2912 REMARK 3 S21: -0.7310 S22: 0.2138 S23: -0.5538 REMARK 3 S31: 0.3565 S32: 0.0103 S33: 0.1748 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 4 THROUGH 203 ) REMARK 3 ORIGIN FOR THE GROUP (A): 71.1756 -24.3703 15.8243 REMARK 3 T TENSOR REMARK 3 T11: 0.2342 T22: 0.2485 REMARK 3 T33: 0.2171 T12: -0.0233 REMARK 3 T13: -0.0165 T23: 0.0480 REMARK 3 L TENSOR REMARK 3 L11: 2.1838 L22: 2.3854 REMARK 3 L33: 1.3199 L12: 0.1405 REMARK 3 L13: 0.0409 L23: 0.2990 REMARK 3 S TENSOR REMARK 3 S11: -0.0132 S12: 0.0049 S13: 0.0866 REMARK 3 S21: -0.1034 S22: -0.0788 S23: -0.2706 REMARK 3 S31: -0.1371 S32: 0.1670 S33: 0.0901 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 204 THROUGH 278 ) REMARK 3 ORIGIN FOR THE GROUP (A): 88.9717 -13.1008 -10.9531 REMARK 3 T TENSOR REMARK 3 T11: 1.2583 T22: 1.0947 REMARK 3 T33: 0.7366 T12: 0.0467 REMARK 3 T13: 0.4055 T23: 0.3136 REMARK 3 L TENSOR REMARK 3 L11: 0.8690 L22: 0.7698 REMARK 3 L33: 1.8996 L12: 0.4866 REMARK 3 L13: -0.2532 L23: -1.0920 REMARK 3 S TENSOR REMARK 3 S11: 0.3177 S12: 0.8815 S13: 0.4201 REMARK 3 S21: -1.3648 S22: -0.1420 S23: -0.6183 REMARK 3 S31: -0.8996 S32: -0.0894 S33: -0.1211 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 1 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): 94.6082 -28.1281 5.2329 REMARK 3 T TENSOR REMARK 3 T11: 0.3650 T22: 0.6714 REMARK 3 T33: 0.6958 T12: 0.0148 REMARK 3 T13: 0.1726 T23: 0.0764 REMARK 3 L TENSOR REMARK 3 L11: 4.0294 L22: 1.7936 REMARK 3 L33: 2.8380 L12: 0.7859 REMARK 3 L13: -0.6850 L23: 0.2396 REMARK 3 S TENSOR REMARK 3 S11: 0.0448 S12: 0.5236 S13: -0.2103 REMARK 3 S21: -0.4896 S22: -0.0027 S23: -1.0177 REMARK 3 S31: -0.0008 S32: 0.9270 S33: 0.0016 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 1 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.3215 -14.3945 42.5858 REMARK 3 T TENSOR REMARK 3 T11: 0.3406 T22: 0.2536 REMARK 3 T33: 0.2835 T12: -0.0377 REMARK 3 T13: -0.0294 T23: -0.0889 REMARK 3 L TENSOR REMARK 3 L11: 2.7650 L22: 2.5023 REMARK 3 L33: 4.5186 L12: -0.0704 REMARK 3 L13: -1.4231 L23: 1.0132 REMARK 3 S TENSOR REMARK 3 S11: 0.0510 S12: -0.1782 S13: 0.2926 REMARK 3 S21: 0.1862 S22: -0.1137 S23: 0.2090 REMARK 3 S31: -0.0455 S32: -0.0052 S33: 0.0691 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8SOS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-MAY-23. REMARK 100 THE DEPOSITION ID IS D_1000274179. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 77042 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.330 REMARK 200 RESOLUTION RANGE LOW (A) : 44.660 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.33 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.41 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 2PO6 & 3P0G REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% PEG8000, 0.05 M ZINC ACETATE, 0.05 REMARK 280 M MES, PH 6.2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 111.17800 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 55.58900 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 55.58900 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 111.17800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 46080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F, G REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 136.44900 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 4 REMARK 465 GLN A 5 REMARK 465 ARG A 6 REMARK 465 GLY A 107 REMARK 465 SER A 279 REMARK 465 LEU A 280 REMARK 465 VAL A 281 REMARK 465 PRO A 282 REMARK 465 ARG A 283 REMARK 465 GLY A 284 REMARK 465 SER A 285 REMARK 465 GLY A 286 REMARK 465 SER A 287 REMARK 465 ARG A 288 REMARK 465 ILE A 289 REMARK 465 ALA A 290 REMARK 465 ARG A 291 REMARK 465 LEU A 292 REMARK 465 GLU A 293 REMARK 465 GLU A 294 REMARK 465 LYS A 295 REMARK 465 VAL A 296 REMARK 465 LYS A 297 REMARK 465 THR A 298 REMARK 465 LEU A 299 REMARK 465 LYS A 300 REMARK 465 ALA A 301 REMARK 465 GLN A 302 REMARK 465 ASN A 303 REMARK 465 SER A 304 REMARK 465 GLU A 305 REMARK 465 LEU A 306 REMARK 465 ALA A 307 REMARK 465 SER A 308 REMARK 465 THR A 309 REMARK 465 ALA A 310 REMARK 465 ASN A 311 REMARK 465 MET A 312 REMARK 465 LEU A 313 REMARK 465 ARG A 314 REMARK 465 GLU A 315 REMARK 465 GLN A 316 REMARK 465 VAL A 317 REMARK 465 ALA A 318 REMARK 465 GLN A 319 REMARK 465 LEU A 320 REMARK 465 LYS A 321 REMARK 465 GLN A 322 REMARK 465 LYS A 323 REMARK 465 VAL A 324 REMARK 465 MET A 325 REMARK 465 ASN A 326 REMARK 465 HIS A 327 REMARK 465 GLY A 328 REMARK 465 SER A 329 REMARK 465 GLY A 330 REMARK 465 LEU A 331 REMARK 465 ASN A 332 REMARK 465 ASP A 333 REMARK 465 ILE A 334 REMARK 465 PHE A 335 REMARK 465 GLU A 336 REMARK 465 ALA A 337 REMARK 465 GLN A 338 REMARK 465 LYS A 339 REMARK 465 ILE A 340 REMARK 465 GLU A 341 REMARK 465 TRP A 342 REMARK 465 HIS A 343 REMARK 465 GLU A 344 REMARK 465 HIS A 345 REMARK 465 HIS A 346 REMARK 465 HIS A 347 REMARK 465 HIS A 348 REMARK 465 HIS A 349 REMARK 465 HIS A 350 REMARK 465 MET B 0 REMARK 465 MET B 99 REMARK 465 GLY E 198 REMARK 465 PRO E 199 REMARK 465 GLY E 200 REMARK 465 ARG E 201 REMARK 465 LEU E 202 REMARK 465 MET E 221 REMARK 465 ASP E 250 REMARK 465 SER E 279 REMARK 465 LEU E 280 REMARK 465 VAL E 281 REMARK 465 PRO E 282 REMARK 465 ARG E 283 REMARK 465 GLY E 284 REMARK 465 SER E 285 REMARK 465 GLY E 286 REMARK 465 SER E 287 REMARK 465 ARG E 288 REMARK 465 ILE E 289 REMARK 465 ALA E 290 REMARK 465 ARG E 291 REMARK 465 LEU E 292 REMARK 465 GLU E 293 REMARK 465 GLU E 294 REMARK 465 LYS E 295 REMARK 465 VAL E 296 REMARK 465 LYS E 297 REMARK 465 THR E 298 REMARK 465 LEU E 299 REMARK 465 LYS E 300 REMARK 465 ALA E 301 REMARK 465 GLN E 302 REMARK 465 ASN E 303 REMARK 465 SER E 304 REMARK 465 GLU E 305 REMARK 465 LEU E 306 REMARK 465 ALA E 307 REMARK 465 SER E 308 REMARK 465 THR E 309 REMARK 465 ALA E 310 REMARK 465 ASN E 311 REMARK 465 MET E 312 REMARK 465 LEU E 313 REMARK 465 ARG E 314 REMARK 465 GLU E 315 REMARK 465 GLN E 316 REMARK 465 VAL E 317 REMARK 465 ALA E 318 REMARK 465 GLN E 319 REMARK 465 LEU E 320 REMARK 465 LYS E 321 REMARK 465 GLN E 322 REMARK 465 LYS E 323 REMARK 465 VAL E 324 REMARK 465 MET E 325 REMARK 465 ASN E 326 REMARK 465 HIS E 327 REMARK 465 GLY E 328 REMARK 465 SER E 329 REMARK 465 GLY E 330 REMARK 465 LEU E 331 REMARK 465 ASN E 332 REMARK 465 ASP E 333 REMARK 465 ILE E 334 REMARK 465 PHE E 335 REMARK 465 GLU E 336 REMARK 465 ALA E 337 REMARK 465 GLN E 338 REMARK 465 LYS E 339 REMARK 465 ILE E 340 REMARK 465 GLU E 341 REMARK 465 TRP E 342 REMARK 465 HIS E 343 REMARK 465 GLU E 344 REMARK 465 HIS E 345 REMARK 465 HIS E 346 REMARK 465 HIS E 347 REMARK 465 HIS E 348 REMARK 465 HIS E 349 REMARK 465 HIS E 350 REMARK 465 MET F 0 REMARK 465 MET F 99 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 121 CD CE NZ REMARK 470 LYS A 178 CE NZ REMARK 470 LYS A 182 CG CD CE NZ REMARK 470 GLU A 224 CD OE1 OE2 REMARK 470 GLN A 227 CG CD OE1 NE2 REMARK 470 GLN A 228 CG CD OE1 NE2 REMARK 470 GLU B 36 CG CD OE1 OE2 REMARK 470 GLU B 44 CG CD OE1 OE2 REMARK 470 GLU B 69 CG CD OE1 OE2 REMARK 470 GLU B 74 CG CD OE1 OE2 REMARK 470 LYS B 75 CG CD CE NZ REMARK 470 LYS B 94 CE NZ REMARK 470 GLN D 13 CG CD OE1 NE2 REMARK 470 LYS D 76 CD CE NZ REMARK 470 GLN E 5 CG CD OE1 NE2 REMARK 470 ARG E 6 CG CD NE CZ NH1 NH2 REMARK 470 LYS E 121 CE NZ REMARK 470 GLN E 135 CG CD OE1 NE2 REMARK 470 LYS E 178 CE NZ REMARK 470 ARG E 193 CG CD NE CZ NH1 NH2 REMARK 470 LEU E 204 CG CD1 CD2 REMARK 470 GLN E 225 CG CD OE1 NE2 REMARK 470 GLN E 227 CG CD OE1 NE2 REMARK 470 GLN E 228 CD OE1 NE2 REMARK 470 LEU E 249 CG CD1 CD2 REMARK 470 LEU E 259 CG CD1 CD2 REMARK 470 GLN E 271 CG CD OE1 NE2 REMARK 470 GLU F 16 CG CD OE1 OE2 REMARK 470 LYS F 19 CG CD CE NZ REMARK 470 GLU F 47 CG CD OE1 OE2 REMARK 470 LYS F 48 CG CD CE NZ REMARK 470 LYS F 94 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 20 -167.74 -163.85 REMARK 500 GLU A 136 54.46 -106.92 REMARK 500 PRO A 213 -169.57 -76.81 REMARK 500 ALA A 256 50.44 -59.69 REMARK 500 TRP B 60 -3.56 77.43 REMARK 500 ARG D 52 -106.69 -134.54 REMARK 500 ASN E 20 -169.54 -162.65 REMARK 500 ASN E 108 10.98 80.16 REMARK 500 PRO E 213 -168.80 -76.77 REMARK 500 TRP F 60 -3.79 78.08 REMARK 500 SER G 28 70.81 -119.66 REMARK 500 ARG G 52 -106.40 -136.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 189 DISTANCE = 6.77 ANGSTROMS REMARK 525 HOH E 666 DISTANCE = 6.46 ANGSTROMS DBREF 8SOS A 5 278 UNP P15813 CD1D_HUMAN 23 296 DBREF 8SOS A 279 350 PDB 8SOS 8SOS 279 350 DBREF 8SOS B 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 8SOS D 1 127 PDB 8SOS 8SOS 1 127 DBREF 8SOS E 5 278 UNP P15813 CD1D_HUMAN 23 296 DBREF 8SOS E 279 350 PDB 8SOS 8SOS 279 350 DBREF 8SOS F 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 8SOS G 1 127 PDB 8SOS 8SOS 1 127 SEQADV 8SOS MET A 4 UNP P15813 INITIATING METHIONINE SEQADV 8SOS MET B 0 UNP P61769 INITIATING METHIONINE SEQADV 8SOS MET E 4 UNP P15813 INITIATING METHIONINE SEQADV 8SOS MET F 0 UNP P61769 INITIATING METHIONINE SEQRES 1 A 347 MET GLN ARG LEU PHE PRO LEU ARG CYS LEU GLN ILE SER SEQRES 2 A 347 SER PHE ALA ASN SER SER TRP THR ARG THR ASP GLY LEU SEQRES 3 A 347 ALA TRP LEU GLY GLU LEU GLN THR HIS SER TRP SER ASN SEQRES 4 A 347 ASP SER ASP THR VAL ARG SER LEU LYS PRO TRP SER GLN SEQRES 5 A 347 GLY THR PHE SER ASP GLN GLN TRP GLU THR LEU GLN HIS SEQRES 6 A 347 ILE PHE ARG VAL TYR ARG SER SER PHE THR ARG ASP VAL SEQRES 7 A 347 LYS GLU PHE ALA LYS MET LEU ARG LEU SER TYR PRO LEU SEQRES 8 A 347 GLU LEU GLN VAL SER ALA GLY CYS GLU VAL HIS PRO GLY SEQRES 9 A 347 ASN ALA SER ASN ASN PHE PHE HIS VAL ALA PHE GLN GLY SEQRES 10 A 347 LYS ASP ILE LEU SER PHE GLN GLY THR SER TRP GLU PRO SEQRES 11 A 347 THR GLN GLU ALA PRO LEU TRP VAL ASN LEU ALA ILE GLN SEQRES 12 A 347 VAL LEU ASN GLN ASP LYS TRP THR ARG GLU THR VAL GLN SEQRES 13 A 347 TRP LEU LEU ASN GLY THR CYS PRO GLN PHE VAL SER GLY SEQRES 14 A 347 LEU LEU GLU SER GLY LYS SER GLU LEU LYS LYS GLN VAL SEQRES 15 A 347 LYS PRO LYS ALA TRP LEU SER ARG GLY PRO SER PRO GLY SEQRES 16 A 347 PRO GLY ARG LEU LEU LEU VAL CYS HIS VAL SER GLY PHE SEQRES 17 A 347 TYR PRO LYS PRO VAL TRP VAL LYS TRP MET ARG GLY GLU SEQRES 18 A 347 GLN GLU GLN GLN GLY THR GLN PRO GLY ASP ILE LEU PRO SEQRES 19 A 347 ASN ALA ASP GLU THR TRP TYR LEU ARG ALA THR LEU ASP SEQRES 20 A 347 VAL VAL ALA GLY GLU ALA ALA GLY LEU SER CYS ARG VAL SEQRES 21 A 347 LYS HIS SER SER LEU GLU GLY GLN ASP ILE VAL LEU TYR SEQRES 22 A 347 TRP GLY SER LEU VAL PRO ARG GLY SER GLY SER ARG ILE SEQRES 23 A 347 ALA ARG LEU GLU GLU LYS VAL LYS THR LEU LYS ALA GLN SEQRES 24 A 347 ASN SER GLU LEU ALA SER THR ALA ASN MET LEU ARG GLU SEQRES 25 A 347 GLN VAL ALA GLN LEU LYS GLN LYS VAL MET ASN HIS GLY SEQRES 26 A 347 SER GLY LEU ASN ASP ILE PHE GLU ALA GLN LYS ILE GLU SEQRES 27 A 347 TRP HIS GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 100 MET ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG SEQRES 2 B 100 HIS PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS SEQRES 3 B 100 TYR VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP SEQRES 4 B 100 LEU LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SEQRES 5 B 100 SER ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU SEQRES 6 B 100 LEU TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU SEQRES 7 B 100 TYR ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO SEQRES 8 B 100 LYS ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 D 127 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 D 127 ALA GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 D 127 SER SER PHE SER SER TYR THR MET THR TRP PHE ARG GLN SEQRES 4 D 127 ALA PRO GLY LYS GLU ARG GLU ILE VAL ALA GLY ILE ARG SEQRES 5 D 127 TRP SER GLY GLU SER PRO TYR TYR ALA ASP SER VAL LYS SEQRES 6 D 127 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 D 127 LEU TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP THR SEQRES 8 D 127 ALA VAL TYR TYR CYS ALA ALA ARG LEU VAL PRO PRO GLY SEQRES 9 D 127 ILE PRO ILE GLU ARG THR LEU GLU SER MET ARG TYR TRP SEQRES 10 D 127 GLY LYS GLY THR LEU VAL THR VAL SER SER SEQRES 1 E 347 MET GLN ARG LEU PHE PRO LEU ARG CYS LEU GLN ILE SER SEQRES 2 E 347 SER PHE ALA ASN SER SER TRP THR ARG THR ASP GLY LEU SEQRES 3 E 347 ALA TRP LEU GLY GLU LEU GLN THR HIS SER TRP SER ASN SEQRES 4 E 347 ASP SER ASP THR VAL ARG SER LEU LYS PRO TRP SER GLN SEQRES 5 E 347 GLY THR PHE SER ASP GLN GLN TRP GLU THR LEU GLN HIS SEQRES 6 E 347 ILE PHE ARG VAL TYR ARG SER SER PHE THR ARG ASP VAL SEQRES 7 E 347 LYS GLU PHE ALA LYS MET LEU ARG LEU SER TYR PRO LEU SEQRES 8 E 347 GLU LEU GLN VAL SER ALA GLY CYS GLU VAL HIS PRO GLY SEQRES 9 E 347 ASN ALA SER ASN ASN PHE PHE HIS VAL ALA PHE GLN GLY SEQRES 10 E 347 LYS ASP ILE LEU SER PHE GLN GLY THR SER TRP GLU PRO SEQRES 11 E 347 THR GLN GLU ALA PRO LEU TRP VAL ASN LEU ALA ILE GLN SEQRES 12 E 347 VAL LEU ASN GLN ASP LYS TRP THR ARG GLU THR VAL GLN SEQRES 13 E 347 TRP LEU LEU ASN GLY THR CYS PRO GLN PHE VAL SER GLY SEQRES 14 E 347 LEU LEU GLU SER GLY LYS SER GLU LEU LYS LYS GLN VAL SEQRES 15 E 347 LYS PRO LYS ALA TRP LEU SER ARG GLY PRO SER PRO GLY SEQRES 16 E 347 PRO GLY ARG LEU LEU LEU VAL CYS HIS VAL SER GLY PHE SEQRES 17 E 347 TYR PRO LYS PRO VAL TRP VAL LYS TRP MET ARG GLY GLU SEQRES 18 E 347 GLN GLU GLN GLN GLY THR GLN PRO GLY ASP ILE LEU PRO SEQRES 19 E 347 ASN ALA ASP GLU THR TRP TYR LEU ARG ALA THR LEU ASP SEQRES 20 E 347 VAL VAL ALA GLY GLU ALA ALA GLY LEU SER CYS ARG VAL SEQRES 21 E 347 LYS HIS SER SER LEU GLU GLY GLN ASP ILE VAL LEU TYR SEQRES 22 E 347 TRP GLY SER LEU VAL PRO ARG GLY SER GLY SER ARG ILE SEQRES 23 E 347 ALA ARG LEU GLU GLU LYS VAL LYS THR LEU LYS ALA GLN SEQRES 24 E 347 ASN SER GLU LEU ALA SER THR ALA ASN MET LEU ARG GLU SEQRES 25 E 347 GLN VAL ALA GLN LEU LYS GLN LYS VAL MET ASN HIS GLY SEQRES 26 E 347 SER GLY LEU ASN ASP ILE PHE GLU ALA GLN LYS ILE GLU SEQRES 27 E 347 TRP HIS GLU HIS HIS HIS HIS HIS HIS SEQRES 1 F 100 MET ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG SEQRES 2 F 100 HIS PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS SEQRES 3 F 100 TYR VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP SEQRES 4 F 100 LEU LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SEQRES 5 F 100 SER ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU SEQRES 6 F 100 LEU TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU SEQRES 7 F 100 TYR ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO SEQRES 8 F 100 LYS ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 G 127 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 G 127 ALA GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 G 127 SER SER PHE SER SER TYR THR MET THR TRP PHE ARG GLN SEQRES 4 G 127 ALA PRO GLY LYS GLU ARG GLU ILE VAL ALA GLY ILE ARG SEQRES 5 G 127 TRP SER GLY GLU SER PRO TYR TYR ALA ASP SER VAL LYS SEQRES 6 G 127 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 G 127 LEU TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP THR SEQRES 8 G 127 ALA VAL TYR TYR CYS ALA ALA ARG LEU VAL PRO PRO GLY SEQRES 9 G 127 ILE PRO ILE GLU ARG THR LEU GLU SER MET ARG TYR TRP SEQRES 10 G 127 GLY LYS GLY THR LEU VAL THR VAL SER SER HET FO4 A 401 56 HET NAG A 402 14 HET NAG A 403 14 HET FO4 E 401 56 HET NAG E 402 14 HET NAG E 403 14 HETNAM FO4 SPHINGOMYELIN HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 7 FO4 2(C47 H94 N2 O6 P) FORMUL 8 NAG 4(C8 H15 N O6) FORMUL 13 HOH *572(H2 O) HELIX 1 AA1 SER A 59 LEU A 88 1 30 HELIX 2 AA2 LEU A 139 ASN A 149 1 11 HELIX 3 AA3 ASP A 151 GLY A 164 1 14 HELIX 4 AA4 GLY A 164 GLY A 177 1 14 HELIX 5 AA5 GLY A 177 LYS A 182 1 6 HELIX 6 AA6 HIS A 265 GLU A 269 5 5 HELIX 7 AA7 SER D 28 SER D 30 5 3 HELIX 8 AA8 ASP D 62 LYS D 65 5 4 HELIX 9 AA9 LYS D 87 THR D 91 5 5 HELIX 10 AB1 PRO D 106 LEU D 111 5 6 HELIX 11 AB2 SER E 59 ARG E 89 1 31 HELIX 12 AB3 PRO E 138 ASN E 149 1 12 HELIX 13 AB4 ASP E 151 GLY E 164 1 14 HELIX 14 AB5 GLY E 164 GLY E 177 1 14 HELIX 15 AB6 GLY E 177 LYS E 182 1 6 HELIX 16 AB7 HIS E 265 GLU E 269 5 5 HELIX 17 AB8 SER G 28 SER G 30 5 3 HELIX 18 AB9 ASP G 62 LYS G 65 5 4 HELIX 19 AC1 LYS G 87 THR G 91 5 5 HELIX 20 AC2 PRO G 106 THR G 110 5 5 SHEET 1 AA1 8 ARG A 48 SER A 49 0 SHEET 2 AA1 8 LEU A 35 TRP A 40 -1 N SER A 39 O ARG A 48 SHEET 3 AA1 8 TRP A 23 LEU A 32 -1 N GLY A 28 O TRP A 40 SHEET 4 AA1 8 LEU A 10 ASN A 20 -1 N ILE A 15 O ASP A 27 SHEET 5 AA1 8 LEU A 94 VAL A 104 -1 O ALA A 100 N CYS A 12 SHEET 6 AA1 8 SER A 110 PHE A 118 -1 O ALA A 117 N GLN A 97 SHEET 7 AA1 8 LYS A 121 GLN A 127 -1 O LYS A 121 N PHE A 118 SHEET 8 AA1 8 SER A 130 PRO A 133 -1 O GLU A 132 N SER A 125 SHEET 1 AA2 4 LYS A 188 ARG A 193 0 SHEET 2 AA2 4 ARG A 201 PHE A 211 -1 O SER A 209 N LYS A 188 SHEET 3 AA2 4 TRP A 243 VAL A 252 -1 O VAL A 251 N LEU A 202 SHEET 4 AA2 4 GLN A 231 PRO A 232 -1 N GLN A 231 O THR A 248 SHEET 1 AA3 4 LYS A 188 ARG A 193 0 SHEET 2 AA3 4 ARG A 201 PHE A 211 -1 O SER A 209 N LYS A 188 SHEET 3 AA3 4 TRP A 243 VAL A 252 -1 O VAL A 251 N LEU A 202 SHEET 4 AA3 4 LEU A 236 PRO A 237 -1 N LEU A 236 O TYR A 244 SHEET 1 AA4 4 GLN A 225 GLU A 226 0 SHEET 2 AA4 4 TRP A 217 ARG A 222 -1 N ARG A 222 O GLN A 225 SHEET 3 AA4 4 SER A 260 LYS A 264 -1 O SER A 260 N MET A 221 SHEET 4 AA4 4 ILE A 273 TYR A 276 -1 O LEU A 275 N CYS A 261 SHEET 1 AA5 4 LYS B 6 SER B 11 0 SHEET 2 AA5 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 AA5 4 PHE B 62 PHE B 70 -1 O PHE B 70 N ASN B 21 SHEET 4 AA5 4 GLU B 50 HIS B 51 -1 N GLU B 50 O TYR B 67 SHEET 1 AA6 4 LYS B 6 SER B 11 0 SHEET 2 AA6 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 AA6 4 PHE B 62 PHE B 70 -1 O PHE B 70 N ASN B 21 SHEET 4 AA6 4 SER B 55 PHE B 56 -1 N SER B 55 O TYR B 63 SHEET 1 AA7 4 GLU B 44 ARG B 45 0 SHEET 2 AA7 4 GLU B 36 LYS B 41 -1 N LYS B 41 O GLU B 44 SHEET 3 AA7 4 TYR B 78 ASN B 83 -1 O ARG B 81 N ASP B 38 SHEET 4 AA7 4 LYS B 91 LYS B 94 -1 O VAL B 93 N CYS B 80 SHEET 1 AA8 4 GLN D 3 SER D 7 0 SHEET 2 AA8 4 LEU D 18 SER D 25 -1 O SER D 21 N SER D 7 SHEET 3 AA8 4 THR D 78 MET D 83 -1 O LEU D 81 N LEU D 20 SHEET 4 AA8 4 PHE D 68 ASP D 73 -1 N SER D 71 O TYR D 80 SHEET 1 AA9 6 LEU D 11 GLN D 13 0 SHEET 2 AA9 6 THR D 121 SER D 126 1 O SER D 126 N VAL D 12 SHEET 3 AA9 6 ALA D 92 LEU D 100 -1 N TYR D 94 O THR D 121 SHEET 4 AA9 6 TYR D 32 GLN D 39 -1 N THR D 33 O ARG D 99 SHEET 5 AA9 6 GLU D 46 ILE D 51 -1 O VAL D 48 N TRP D 36 SHEET 6 AA9 6 TYR D 59 TYR D 60 -1 O TYR D 59 N GLY D 50 SHEET 1 AB1 4 LEU D 11 GLN D 13 0 SHEET 2 AB1 4 THR D 121 SER D 126 1 O SER D 126 N VAL D 12 SHEET 3 AB1 4 ALA D 92 LEU D 100 -1 N TYR D 94 O THR D 121 SHEET 4 AB1 4 TYR D 116 TRP D 117 -1 N TYR D 116 O ALA D 98 SHEET 1 AB2 8 ARG E 48 SER E 49 0 SHEET 2 AB2 8 LEU E 35 TRP E 40 -1 N SER E 39 O ARG E 48 SHEET 3 AB2 8 TRP E 23 LEU E 32 -1 N LEU E 32 O LEU E 35 SHEET 4 AB2 8 LEU E 10 ASN E 20 -1 N ILE E 15 O ASP E 27 SHEET 5 AB2 8 LEU E 94 HIS E 105 -1 O ALA E 100 N CYS E 12 SHEET 6 AB2 8 ALA E 109 PHE E 118 -1 O ALA E 117 N GLN E 97 SHEET 7 AB2 8 LYS E 121 GLN E 127 -1 O LYS E 121 N PHE E 118 SHEET 8 AB2 8 SER E 130 PRO E 133 -1 O GLU E 132 N SER E 125 SHEET 1 AB3 4 LYS E 188 ARG E 193 0 SHEET 2 AB3 4 LEU E 204 PHE E 211 -1 O SER E 209 N LYS E 188 SHEET 3 AB3 4 TRP E 243 THR E 248 -1 O ALA E 247 N CYS E 206 SHEET 4 AB3 4 GLN E 231 PRO E 232 -1 N GLN E 231 O THR E 248 SHEET 1 AB4 4 LYS E 188 ARG E 193 0 SHEET 2 AB4 4 LEU E 204 PHE E 211 -1 O SER E 209 N LYS E 188 SHEET 3 AB4 4 TRP E 243 THR E 248 -1 O ALA E 247 N CYS E 206 SHEET 4 AB4 4 LEU E 236 PRO E 237 -1 N LEU E 236 O TYR E 244 SHEET 1 AB5 3 TRP E 217 LYS E 219 0 SHEET 2 AB5 3 SER E 260 LYS E 264 -1 O LYS E 264 N TRP E 217 SHEET 3 AB5 3 ILE E 273 TYR E 276 -1 O LEU E 275 N CYS E 261 SHEET 1 AB6 4 LYS F 6 SER F 11 0 SHEET 2 AB6 4 ASN F 21 PHE F 30 -1 O ASN F 24 N TYR F 10 SHEET 3 AB6 4 PHE F 62 PHE F 70 -1 O LEU F 64 N VAL F 27 SHEET 4 AB6 4 GLU F 50 HIS F 51 -1 N GLU F 50 O TYR F 67 SHEET 1 AB7 4 LYS F 6 SER F 11 0 SHEET 2 AB7 4 ASN F 21 PHE F 30 -1 O ASN F 24 N TYR F 10 SHEET 3 AB7 4 PHE F 62 PHE F 70 -1 O LEU F 64 N VAL F 27 SHEET 4 AB7 4 SER F 55 PHE F 56 -1 N SER F 55 O TYR F 63 SHEET 1 AB8 4 GLU F 44 ARG F 45 0 SHEET 2 AB8 4 GLU F 36 LYS F 41 -1 N LYS F 41 O GLU F 44 SHEET 3 AB8 4 TYR F 78 ASN F 83 -1 O ALA F 79 N LEU F 40 SHEET 4 AB8 4 LYS F 91 LYS F 94 -1 O VAL F 93 N CYS F 80 SHEET 1 AB9 4 GLN G 3 SER G 7 0 SHEET 2 AB9 4 LEU G 18 SER G 25 -1 O SER G 21 N SER G 7 SHEET 3 AB9 4 THR G 78 MET G 83 -1 O MET G 83 N LEU G 18 SHEET 4 AB9 4 PHE G 68 ASP G 73 -1 N SER G 71 O TYR G 80 SHEET 1 AC1 6 LEU G 11 GLN G 13 0 SHEET 2 AC1 6 THR G 121 SER G 126 1 O THR G 124 N VAL G 12 SHEET 3 AC1 6 ALA G 92 LEU G 100 -1 N TYR G 94 O THR G 121 SHEET 4 AC1 6 TYR G 32 GLN G 39 -1 N THR G 33 O ARG G 99 SHEET 5 AC1 6 GLU G 46 ILE G 51 -1 O VAL G 48 N TRP G 36 SHEET 6 AC1 6 TYR G 59 TYR G 60 -1 O TYR G 59 N GLY G 50 SHEET 1 AC2 4 LEU G 11 GLN G 13 0 SHEET 2 AC2 4 THR G 121 SER G 126 1 O THR G 124 N VAL G 12 SHEET 3 AC2 4 ALA G 92 LEU G 100 -1 N TYR G 94 O THR G 121 SHEET 4 AC2 4 TYR G 116 TRP G 117 -1 O TYR G 116 N ALA G 98 SSBOND 1 CYS A 102 CYS A 166 1555 1555 2.03 SSBOND 2 CYS A 206 CYS A 261 1555 1555 2.03 SSBOND 3 CYS B 25 CYS B 80 1555 1555 2.03 SSBOND 4 CYS D 22 CYS D 96 1555 1555 2.03 SSBOND 5 CYS E 102 CYS E 166 1555 1555 2.03 SSBOND 6 CYS E 206 CYS E 261 1555 1555 2.04 SSBOND 7 CYS F 25 CYS F 80 1555 1555 2.03 SSBOND 8 CYS G 22 CYS G 96 1555 1555 2.04 LINK ND2 ASN A 20 C1 NAG A 402 1555 1555 1.44 LINK ND2 ASN A 42 C1 NAG A 403 1555 1555 1.44 LINK ND2 ASN E 20 C1 NAG E 402 1555 1555 1.44 LINK ND2 ASN E 42 C1 NAG E 403 1555 1555 1.44 CISPEP 1 TYR A 92 PRO A 93 0 1.86 CISPEP 2 TYR A 212 PRO A 213 0 1.65 CISPEP 3 HIS B 31 PRO B 32 0 2.67 CISPEP 4 TYR E 92 PRO E 93 0 2.36 CISPEP 5 TYR E 212 PRO E 213 0 1.42 CISPEP 6 HIS F 31 PRO F 32 0 2.72 CRYST1 136.449 136.449 166.767 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007329 0.004231 0.000000 0.00000 SCALE2 0.000000 0.008463 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005996 0.00000