data_8SP9 # _entry.id 8SP9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8SP9 pdb_00008sp9 10.2210/pdb8sp9/pdb WWPDB D_1000274205 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8SP9 _pdbx_database_status.recvd_initial_deposition_date 2023-05-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Gottipati, K.' 1 ? 'McNeme, S.C.' 2 ? 'Choi, K.H.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 51 _citation.language ? _citation.page_first 8850 _citation.page_last 8863 _citation.title 'Structural basis for cloverleaf RNA-initiated viral genome replication.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkad618 _citation.pdbx_database_id_PubMed 37486760 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gottipati, K.' 1 ? primary 'McNeme, S.C.' 2 ? primary 'Tipo, J.' 3 ? primary 'White, M.A.' 4 ? primary 'Choi, K.H.' 5 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 92.014 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8SP9 _cell.details ? _cell.formula_units_Z ? _cell.length_a 76.429 _cell.length_a_esd ? _cell.length_b 28.359 _cell.length_b_esd ? _cell.length_c 113.111 _cell.length_c_esd ? _cell.volume 245010.994 _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8SP9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'tRNA scaffold,CVB3 Cloverleaf RNA' _entity.formula_weight 49187.055 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GCCCGGAUAGCUCAGUCGGUAGAGCAGCGGUAAAACAGCCUGUGGGUUGAUCCCACCCACAGGGCCCAUUGGGCGCUAGC ACUCUGGUAUCACGGUACCUUUGUGCGCCUGUUUUACCGCGGGUCCAGGGUUCAAGUCCCUGUUCGGGCGCCA ; _entity_poly.pdbx_seq_one_letter_code_can ;GCCCGGAUAGCUCAGUCGGUAGAGCAGCGGUAAAACAGCCUGUGGGUUGAUCCCACCCACAGGGCCCAUUGGGCGCUAGC ACUCUGGUAUCACGGUACCUUUGUGCGCCUGUUUUACCGCGGGUCCAGGGUUCAAGUCCCUGUUCGGGCGCCA ; _entity_poly.pdbx_strand_id C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 C n 1 3 C n 1 4 C n 1 5 G n 1 6 G n 1 7 A n 1 8 U n 1 9 A n 1 10 G n 1 11 C n 1 12 U n 1 13 C n 1 14 A n 1 15 G n 1 16 U n 1 17 C n 1 18 G n 1 19 G n 1 20 U n 1 21 A n 1 22 G n 1 23 A n 1 24 G n 1 25 C n 1 26 A n 1 27 G n 1 28 C n 1 29 G n 1 30 G n 1 31 U n 1 32 A n 1 33 A n 1 34 A n 1 35 A n 1 36 C n 1 37 A n 1 38 G n 1 39 C n 1 40 C n 1 41 U n 1 42 G n 1 43 U n 1 44 G n 1 45 G n 1 46 G n 1 47 U n 1 48 U n 1 49 G n 1 50 A n 1 51 U n 1 52 C n 1 53 C n 1 54 C n 1 55 A n 1 56 C n 1 57 C n 1 58 C n 1 59 A n 1 60 C n 1 61 A n 1 62 G n 1 63 G n 1 64 G n 1 65 C n 1 66 C n 1 67 C n 1 68 A n 1 69 U n 1 70 U n 1 71 G n 1 72 G n 1 73 G n 1 74 C n 1 75 G n 1 76 C n 1 77 U n 1 78 A n 1 79 G n 1 80 C n 1 81 A n 1 82 C n 1 83 U n 1 84 C n 1 85 U n 1 86 G n 1 87 G n 1 88 U n 1 89 A n 1 90 U n 1 91 C n 1 92 A n 1 93 C n 1 94 G n 1 95 G n 1 96 U n 1 97 A n 1 98 C n 1 99 C n 1 100 U n 1 101 U n 1 102 U n 1 103 G n 1 104 U n 1 105 G n 1 106 C n 1 107 G n 1 108 C n 1 109 C n 1 110 U n 1 111 G n 1 112 U n 1 113 U n 1 114 U n 1 115 U n 1 116 A n 1 117 C n 1 118 C n 1 119 G n 1 120 C n 1 121 G n 1 122 G n 1 123 G n 1 124 U n 1 125 C n 1 126 C n 1 127 A n 1 128 G n 1 129 G n 1 130 G n 1 131 U n 1 132 U n 1 133 C n 1 134 A n 1 135 A n 1 136 G n 1 137 U n 1 138 C n 1 139 C n 1 140 C n 1 141 U n 1 142 G n 1 143 U n 1 144 U n 1 145 C n 1 146 G n 1 147 G n 1 148 G n 1 149 C n 1 150 G n 1 151 C n 1 152 C n 1 153 A n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 30 human ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 2 sample 'Biological sequence' 31 120 ? ? ? ? ? ? ? ? ? 'Coxsackievirus B3' 12072 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 3 sample 'Biological sequence' 121 153 human ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 GB U00939.1 U00939.1 ? 1 GCCCGGAUAGCUCAGUCGGUAGAGCA 1 2 GB NC_038307.1 NC_038307.1 ? 1 ;UAAAACAGCCUGUGGGUUGAUCCCACCCACAGGGCCCAUUGGGCGCUAGCACUCUGGUAUCACGGUACCUUUGUGCGCCU GUUUUA ; 2 3 GB U00939.1 U00939.1 ? 1 GGGUCCAGGGUUCAAGUCCCUGUUCGGGCGCCA 44 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8SP9 C 1 ? 26 ? U00939.1 1 ? 26 ? 1 26 2 2 8SP9 C 31 ? 116 ? NC_038307.1 2 ? 87 ? 31 116 3 3 8SP9 C 121 ? 153 ? U00939.1 44 ? 76 ? 121 153 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8SP9 G C 27 ? GB U00939.1 ? ? linker 27 1 1 8SP9 C C 28 ? GB U00939.1 ? ? linker 28 2 1 8SP9 G C 29 ? GB U00939.1 ? ? linker 29 3 1 8SP9 G C 30 ? GB U00939.1 ? ? linker 30 4 2 8SP9 C C 117 ? GB NC_038307.1 ? ? linker 117 5 2 8SP9 C C 118 ? GB NC_038307.1 ? ? linker 118 6 2 8SP9 G C 119 ? GB NC_038307.1 ? ? linker 119 7 2 8SP9 C C 120 ? GB NC_038307.1 ? ? linker 120 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8SP9 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.49 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 50.61 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;100 mM Bis-Tris, pH 6.5, 48% polypropylene glycol (PPG)-P400 ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293.15 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-06-15 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9785 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 21-ID-D' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9785 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 21-ID-D _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 49.96 _reflns.entry_id 8SP9 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.9 _reflns.d_resolution_low 44.7 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 9250 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 83.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 2.5 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 5.74 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.094 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.92 _reflns_shell.d_res_low 2.97 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 232 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.401 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 105 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8SP9 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.92 _refine.ls_d_res_low 44.69 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 7020 _refine.ls_number_reflns_R_free 348 _refine.ls_number_reflns_R_work 6672 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 63.29 _refine.ls_percent_reflns_R_free 4.96 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2917 _refine.ls_R_factor_R_free 0.3082 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2908 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.79 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 37.6576 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2664 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.92 _refine_hist.d_res_low 44.69 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2895 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 2895 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0023 ? 3231 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.6879 ? 5032 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0357 ? 680 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0037 ? 136 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 20.8650 ? 1626 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.92 3.68 . . 114 2240 43.29 . . . . 0.3318 . . . . . . . . . . . 0.3945 'X-RAY DIFFRACTION' 3.68 44.69 . . 234 4432 82.54 . . . . 0.2794 . . . . . . . . . . . 0.2835 # _struct.entry_id 8SP9 _struct.title 'Crystal Structure of Coxsackievirus B3 (CVB3) Cloverleaf RNA with tRNA scaffold' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8SP9 _struct_keywords.text 'cloverleaf, base-triple, picornavirus, tRNA-scaffold, RNA' _struct_keywords.pdbx_keywords RNA # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 149 N3 ? ? C G 1 C C 149 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 149 O2 ? ? C G 1 C C 149 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 149 N4 ? ? C G 1 C C 149 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A C 2 N3 ? ? ? 1_555 A G 148 N1 ? ? C C 2 C G 148 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A C 2 N4 ? ? ? 1_555 A G 148 O6 ? ? C C 2 C G 148 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 2 O2 ? ? ? 1_555 A G 148 N2 ? ? C C 2 C G 148 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 147 N1 ? ? C C 3 C G 147 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 147 O6 ? ? C C 3 C G 147 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 147 N2 ? ? C C 3 C G 147 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 146 N1 ? ? C C 4 C G 146 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 146 O6 ? ? C C 4 C G 146 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 146 N2 ? ? C C 4 C G 146 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 5 N1 ? ? ? 1_555 A C 145 N3 ? ? C G 5 C C 145 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 5 N2 ? ? ? 1_555 A C 145 O2 ? ? C G 5 C C 145 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 5 O6 ? ? ? 1_555 A C 145 N4 ? ? C G 5 C C 145 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 6 N1 ? ? ? 1_555 A U 144 O2 ? ? C G 6 C U 144 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog17 hydrog ? ? A G 6 O6 ? ? ? 1_555 A U 144 N3 ? ? C G 6 C U 144 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog18 hydrog ? ? A A 7 N1 ? ? ? 1_555 A U 143 N3 ? ? C A 7 C U 143 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A A 7 N6 ? ? ? 1_555 A U 143 O4 ? ? C A 7 C U 143 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A U 8 N3 ? ? ? 1_555 A A 14 N7 ? ? C U 8 C A 14 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog21 hydrog ? ? A A 9 N6 ? ? ? 1_555 A A 23 N7 ? ? C A 9 C A 23 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog22 hydrog ? ? A A 9 N7 ? ? ? 1_555 A A 23 N6 ? ? C A 9 C A 23 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog23 hydrog ? ? A G 10 N1 ? ? ? 1_555 A C 25 N3 ? ? C G 10 C C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 10 N2 ? ? ? 1_555 A C 25 O2 ? ? C G 10 C C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 10 O6 ? ? ? 1_555 A C 25 N4 ? ? C G 10 C C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A G 10 O6 ? ? ? 1_555 A G 122 N2 ? ? C G 10 C G 122 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog27 hydrog ? ? A C 11 N3 ? ? ? 1_555 A G 24 N1 ? ? C C 11 C G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 11 N4 ? ? ? 1_555 A G 24 O6 ? ? C C 11 C G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A C 11 O2 ? ? ? 1_555 A G 24 N2 ? ? C C 11 C G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A U 12 N3 ? ? ? 1_555 A A 23 N1 ? ? C U 12 C A 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A U 12 O4 ? ? ? 1_555 A A 23 N6 ? ? C U 12 C A 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A C 13 N3 ? ? ? 1_555 A G 22 N1 ? ? C C 13 C G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A C 13 N4 ? ? ? 1_555 A G 22 O6 ? ? C C 13 C G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A C 13 O2 ? ? ? 1_555 A G 22 N2 ? ? C C 13 C G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A A 14 N6 ? ? ? 1_555 A A 21 N3 ? ? C A 14 C A 21 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog36 hydrog ? ? A G 15 N1 ? ? ? 1_555 A C 125 O2 ? ? C G 15 C C 125 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog37 hydrog ? ? A G 15 N2 ? ? ? 1_555 A C 125 N3 ? ? C G 15 C C 125 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog38 hydrog ? ? A G 18 N1 ? ? ? 1_555 A U 132 O2 ? ? C G 18 C U 132 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog39 hydrog ? ? A G 19 N1 ? ? ? 1_555 A C 133 N3 ? ? C G 19 C C 133 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A G 19 N2 ? ? ? 1_555 A C 133 O2 ? ? C G 19 C C 133 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A G 19 O6 ? ? ? 1_555 A C 133 N4 ? ? C G 19 C C 133 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A G 22 N7 ? ? ? 1_555 A G 123 N1 ? ? C G 22 C G 123 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog43 hydrog ? ? A G 22 O6 ? ? ? 1_555 A G 123 N2 ? ? C G 22 C G 123 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog44 hydrog ? ? A A 26 N6 ? ? ? 1_555 A G 121 O6 ? ? C A 26 C G 121 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog45 hydrog ? ? A G 27 N1 ? ? ? 1_555 A C 120 N3 ? ? C G 27 C C 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A G 27 N2 ? ? ? 1_555 A C 120 O2 ? ? C G 27 C C 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A G 27 O6 ? ? ? 1_555 A C 120 N4 ? ? C G 27 C C 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A C 28 N3 ? ? ? 1_555 A G 119 N1 ? ? C C 28 C G 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A C 28 N4 ? ? ? 1_555 A G 119 O6 ? ? C C 28 C G 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A C 28 O2 ? ? ? 1_555 A G 119 N2 ? ? C C 28 C G 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A G 29 N1 ? ? ? 1_555 A C 118 N3 ? ? C G 29 C C 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 29 N2 ? ? ? 1_555 A C 118 O2 ? ? C G 29 C C 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A G 29 O6 ? ? ? 1_555 A C 118 N4 ? ? C G 29 C C 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A G 30 N1 ? ? ? 1_555 A C 117 N3 ? ? C G 30 C C 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A G 30 N2 ? ? ? 1_555 A C 117 O2 ? ? C G 30 C C 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A G 30 O6 ? ? ? 1_555 A C 117 N4 ? ? C G 30 C C 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A U 31 N3 ? ? ? 1_555 A A 116 N1 ? ? C U 31 C A 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A U 31 O4 ? ? ? 1_555 A A 116 N6 ? ? C U 31 C A 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A A 32 N1 ? ? ? 1_555 A U 115 N3 ? ? C A 32 C U 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A A 32 N6 ? ? ? 1_555 A U 115 O4 ? ? C A 32 C U 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A A 33 N1 ? ? ? 1_555 A U 114 N3 ? ? C A 33 C U 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A A 33 N6 ? ? ? 1_555 A U 114 O4 ? ? C A 33 C U 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A A 34 N1 ? ? ? 1_555 A U 113 N3 ? ? C A 34 C U 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A A 34 N6 ? ? ? 1_555 A U 113 O4 ? ? C A 34 C U 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A A 35 N1 ? ? ? 1_555 A U 112 N3 ? ? C A 35 C U 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A A 35 N6 ? ? ? 1_555 A U 112 O4 ? ? C A 35 C U 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A C 36 N3 ? ? ? 1_555 A G 111 N1 ? ? C C 36 C G 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A C 36 N4 ? ? ? 1_555 A G 111 O6 ? ? C C 36 C G 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A C 36 O2 ? ? ? 1_555 A G 111 N2 ? ? C C 36 C G 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A A 37 N1 ? ? ? 1_555 A U 110 N3 ? ? C A 37 C U 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A A 37 N6 ? ? ? 1_555 A U 110 O4 ? ? C A 37 C U 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A G 38 N1 ? ? ? 1_555 A C 109 N3 ? ? C G 38 C C 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A G 38 N2 ? ? ? 1_555 A C 109 O2 ? ? C G 38 C C 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A G 38 O6 ? ? ? 1_555 A C 109 N4 ? ? C G 38 C C 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A C 39 N3 ? ? ? 1_555 A G 63 N1 ? ? C C 39 C G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A C 39 N4 ? ? ? 1_555 A G 63 O6 ? ? C C 39 C G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A C 39 O2 ? ? ? 1_555 A G 63 N2 ? ? C C 39 C G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A C 40 N3 ? ? ? 1_555 A G 62 N1 ? ? C C 40 C G 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? A C 40 N4 ? ? ? 1_555 A G 62 O6 ? ? C C 40 C G 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? A C 40 O2 ? ? ? 1_555 A G 62 N2 ? ? C C 40 C G 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? A U 41 N3 ? ? ? 1_555 A A 61 N1 ? ? C U 41 C A 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? A U 41 O4 ? ? ? 1_555 A A 61 N6 ? ? C U 41 C A 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A G 42 N1 ? ? ? 1_555 A C 60 N3 ? ? C G 42 C C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A G 42 N2 ? ? ? 1_555 A C 60 O2 ? ? C G 42 C C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? A G 42 O6 ? ? ? 1_555 A C 60 N4 ? ? C G 42 C C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? A U 43 N3 ? ? ? 1_555 A A 59 N1 ? ? C U 43 C A 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? A U 43 O4 ? ? ? 1_555 A A 59 N6 ? ? C U 43 C A 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? A G 64 N1 ? ? ? 1_555 A C 74 N3 ? ? C G 64 C C 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? A G 64 N2 ? ? ? 1_555 A C 74 O2 ? ? C G 64 C C 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? A G 64 O6 ? ? ? 1_555 A C 74 N4 ? ? C G 64 C C 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? A C 65 N3 ? ? ? 1_555 A G 73 N1 ? ? C C 65 C G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? A C 65 N4 ? ? ? 1_555 A G 73 O6 ? ? C C 65 C G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? A C 65 O2 ? ? ? 1_555 A G 73 N2 ? ? C C 65 C G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? A C 66 N3 ? ? ? 1_555 A G 72 N1 ? ? C C 66 C G 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? A C 66 N4 ? ? ? 1_555 A G 72 O6 ? ? C C 66 C G 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? A C 66 O2 ? ? ? 1_555 A G 72 N2 ? ? C C 66 C G 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? A C 67 N3 ? ? ? 1_555 A G 71 N1 ? ? C C 67 C G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? A C 67 N4 ? ? ? 1_555 A G 71 O6 ? ? C C 67 C G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? A C 67 O2 ? ? ? 1_555 A G 71 N2 ? ? C C 67 C G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? A A 68 N6 ? ? ? 1_555 A C 84 O2 ? ? C A 68 C C 84 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog101 hydrog ? ? A A 68 N6 ? ? ? 1_555 A U 101 O2 ? ? C A 68 C U 101 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog102 hydrog ? ? A G 75 N1 ? ? ? 1_555 A C 108 N3 ? ? C G 75 C C 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? A G 75 N2 ? ? ? 1_555 A C 108 O2 ? ? C G 75 C C 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? A G 75 O6 ? ? ? 1_555 A C 108 N4 ? ? C G 75 C C 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? A C 76 N3 ? ? ? 1_555 A G 107 N1 ? ? C C 76 C G 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? A C 76 N4 ? ? ? 1_555 A G 107 O6 ? ? C C 76 C G 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? A C 76 O2 ? ? ? 1_555 A G 107 N2 ? ? C C 76 C G 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? A G 79 N1 ? ? ? 1_555 A C 106 N3 ? ? C G 79 C C 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? A G 79 N2 ? ? ? 1_555 A C 106 O2 ? ? C G 79 C C 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? A G 79 O6 ? ? ? 1_555 A C 106 N4 ? ? C G 79 C C 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? A C 80 N3 ? ? ? 1_555 A G 105 N1 ? ? C C 80 C G 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? A C 80 N4 ? ? ? 1_555 A G 105 O6 ? ? C C 80 C G 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? A C 80 O2 ? ? ? 1_555 A G 105 N2 ? ? C C 80 C G 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? A A 81 N1 ? ? ? 1_555 A U 104 N3 ? ? C A 81 C U 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? A A 81 N6 ? ? ? 1_555 A U 104 O4 ? ? C A 81 C U 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? A C 82 N3 ? ? ? 1_555 A G 103 N1 ? ? C C 82 C G 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? A C 82 N4 ? ? ? 1_555 A G 103 O6 ? ? C C 82 C G 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog118 hydrog ? ? A C 82 O2 ? ? ? 1_555 A G 103 N2 ? ? C C 82 C G 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog119 hydrog ? ? A U 83 N3 ? ? ? 1_555 A U 102 O4 ? ? C U 83 C U 102 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog120 hydrog ? ? A U 83 O2 ? ? ? 1_555 A U 102 N3 ? ? C U 83 C U 102 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog121 hydrog ? ? A C 84 N3 ? ? ? 1_555 A U 101 N3 ? ? C C 84 C U 101 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog122 hydrog ? ? A C 84 N4 ? ? ? 1_555 A U 101 O4 ? ? C C 84 C U 101 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog123 hydrog ? ? A U 85 N3 ? ? ? 1_555 A U 100 O2 ? ? C U 85 C U 100 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog124 hydrog ? ? A U 85 O4 ? ? ? 1_555 A U 100 N3 ? ? C U 85 C U 100 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog125 hydrog ? ? A G 86 N1 ? ? ? 1_555 A C 99 N3 ? ? C G 86 C C 99 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? A G 86 N2 ? ? ? 1_555 A C 99 O2 ? ? C G 86 C C 99 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? A G 86 O6 ? ? ? 1_555 A C 99 N4 ? ? C G 86 C C 99 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? A G 87 N1 ? ? ? 1_555 A C 98 N3 ? ? C G 87 C C 98 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? A G 87 N2 ? ? ? 1_555 A C 98 O2 ? ? C G 87 C C 98 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? A G 87 O6 ? ? ? 1_555 A C 98 N4 ? ? C G 87 C C 98 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? A U 88 N3 ? ? ? 1_555 A A 97 N1 ? ? C U 88 C A 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? A U 88 O4 ? ? ? 1_555 A A 97 N6 ? ? C U 88 C A 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? A A 89 N1 ? ? ? 1_555 A U 96 N3 ? ? C A 89 C U 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog134 hydrog ? ? A A 89 N6 ? ? ? 1_555 A U 96 O4 ? ? C A 89 C U 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog135 hydrog ? ? A U 90 N3 ? ? ? 1_555 A G 95 O6 ? ? C U 90 C G 95 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog136 hydrog ? ? A U 90 O2 ? ? ? 1_555 A G 95 N1 ? ? C U 90 C G 95 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog137 hydrog ? ? A C 91 O2 ? ? ? 1_555 A G 94 N2 ? ? C C 91 C G 94 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog138 hydrog ? ? A C 126 N3 ? ? ? 1_555 A G 142 N1 ? ? C C 126 C G 142 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog139 hydrog ? ? A C 126 N4 ? ? ? 1_555 A G 142 O6 ? ? C C 126 C G 142 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog140 hydrog ? ? A C 126 O2 ? ? ? 1_555 A G 142 N2 ? ? C C 126 C G 142 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog141 hydrog ? ? A A 127 N1 ? ? ? 1_555 A U 141 N3 ? ? C A 127 C U 141 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog142 hydrog ? ? A A 127 N6 ? ? ? 1_555 A U 141 O4 ? ? C A 127 C U 141 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog143 hydrog ? ? A G 128 N1 ? ? ? 1_555 A C 140 N3 ? ? C G 128 C C 140 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog144 hydrog ? ? A G 128 N2 ? ? ? 1_555 A C 140 O2 ? ? C G 128 C C 140 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog145 hydrog ? ? A G 128 O6 ? ? ? 1_555 A C 140 N4 ? ? C G 128 C C 140 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog146 hydrog ? ? A G 129 N1 ? ? ? 1_555 A C 139 N3 ? ? C G 129 C C 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog147 hydrog ? ? A G 129 N2 ? ? ? 1_555 A C 139 O2 ? ? C G 129 C C 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog148 hydrog ? ? A G 129 O6 ? ? ? 1_555 A C 139 N4 ? ? C G 129 C C 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog149 hydrog ? ? A G 130 N1 ? ? ? 1_555 A C 138 N3 ? ? C G 130 C C 138 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog150 hydrog ? ? A G 130 N2 ? ? ? 1_555 A C 138 O2 ? ? C G 130 C C 138 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog151 hydrog ? ? A G 130 O6 ? ? ? 1_555 A C 138 N4 ? ? C G 130 C C 138 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog152 hydrog ? ? A U 131 N3 ? ? ? 1_555 A A 135 N7 ? ? C U 131 C A 135 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 8SP9 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.013084 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000460 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.035262 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008846 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 7.96527 ? ? ? 9.05267 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G C . n A 1 2 C 2 2 2 C C C . n A 1 3 C 3 3 3 C C C . n A 1 4 C 4 4 4 C C C . n A 1 5 G 5 5 5 G G C . n A 1 6 G 6 6 6 G G C . n A 1 7 A 7 7 7 A A C . n A 1 8 U 8 8 8 U U C . n A 1 9 A 9 9 9 A A C . n A 1 10 G 10 10 10 G G C . n A 1 11 C 11 11 11 C C C . n A 1 12 U 12 12 12 U U C . n A 1 13 C 13 13 13 C C C . n A 1 14 A 14 14 14 A A C . n A 1 15 G 15 15 15 G G C . n A 1 16 U 16 16 16 U U C . n A 1 17 C 17 17 17 C C C . n A 1 18 G 18 18 18 G G C . n A 1 19 G 19 19 19 G G C . n A 1 20 U 20 20 20 U U C . n A 1 21 A 21 21 21 A A C . n A 1 22 G 22 22 22 G G C . n A 1 23 A 23 23 23 A A C . n A 1 24 G 24 24 24 G G C . n A 1 25 C 25 25 25 C C C . n A 1 26 A 26 26 26 A A C . n A 1 27 G 27 27 27 G G C . n A 1 28 C 28 28 28 C C C . n A 1 29 G 29 29 29 G G C . n A 1 30 G 30 30 30 G G C . n A 1 31 U 31 31 31 U U C . n A 1 32 A 32 32 32 A A C . n A 1 33 A 33 33 33 A A C . n A 1 34 A 34 34 34 A A C . n A 1 35 A 35 35 35 A A C . n A 1 36 C 36 36 36 C C C . n A 1 37 A 37 37 37 A A C . n A 1 38 G 38 38 38 G G C . n A 1 39 C 39 39 39 C C C . n A 1 40 C 40 40 40 C C C . n A 1 41 U 41 41 41 U U C . n A 1 42 G 42 42 42 G G C . n A 1 43 U 43 43 43 U U C . n A 1 44 G 44 44 ? ? ? C . n A 1 45 G 45 45 ? ? ? C . n A 1 46 G 46 46 ? ? ? C . n A 1 47 U 47 47 ? ? ? C . n A 1 48 U 48 48 ? ? ? C . n A 1 49 G 49 49 ? ? ? C . n A 1 50 A 50 50 ? ? ? C . n A 1 51 U 51 51 ? ? ? C . n A 1 52 C 52 52 ? ? ? C . n A 1 53 C 53 53 ? ? ? C . n A 1 54 C 54 54 ? ? ? C . n A 1 55 A 55 55 ? ? ? C . n A 1 56 C 56 56 ? ? ? C . n A 1 57 C 57 57 ? ? ? C . n A 1 58 C 58 58 ? ? ? C . n A 1 59 A 59 59 59 A A C . n A 1 60 C 60 60 60 C C C . n A 1 61 A 61 61 61 A A C . n A 1 62 G 62 62 62 G G C . n A 1 63 G 63 63 63 G G C . n A 1 64 G 64 64 64 G G C . n A 1 65 C 65 65 65 C C C . n A 1 66 C 66 66 66 C C C . n A 1 67 C 67 67 67 C C C . n A 1 68 A 68 68 68 A A C . n A 1 69 U 69 69 69 U U C . n A 1 70 U 70 70 70 U U C . n A 1 71 G 71 71 71 G G C . n A 1 72 G 72 72 72 G G C . n A 1 73 G 73 73 73 G G C . n A 1 74 C 74 74 74 C C C . n A 1 75 G 75 75 75 G G C . n A 1 76 C 76 76 76 C C C . n A 1 77 U 77 77 77 U U C . n A 1 78 A 78 78 78 A A C . n A 1 79 G 79 79 79 G G C . n A 1 80 C 80 80 80 C C C . n A 1 81 A 81 81 81 A A C . n A 1 82 C 82 82 82 C C C . n A 1 83 U 83 83 83 U U C . n A 1 84 C 84 84 84 C C C . n A 1 85 U 85 85 85 U U C . n A 1 86 G 86 86 86 G G C . n A 1 87 G 87 87 87 G G C . n A 1 88 U 88 88 88 U U C . n A 1 89 A 89 89 89 A A C . n A 1 90 U 90 90 90 U U C . n A 1 91 C 91 91 91 C C C . n A 1 92 A 92 92 92 A A C . n A 1 93 C 93 93 93 C C C . n A 1 94 G 94 94 94 G G C . n A 1 95 G 95 95 95 G G C . n A 1 96 U 96 96 96 U U C . n A 1 97 A 97 97 97 A A C . n A 1 98 C 98 98 98 C C C . n A 1 99 C 99 99 99 C C C . n A 1 100 U 100 100 100 U U C . n A 1 101 U 101 101 101 U U C . n A 1 102 U 102 102 102 U U C . n A 1 103 G 103 103 103 G G C . n A 1 104 U 104 104 104 U U C . n A 1 105 G 105 105 105 G G C . n A 1 106 C 106 106 106 C C C . n A 1 107 G 107 107 107 G G C . n A 1 108 C 108 108 108 C C C . n A 1 109 C 109 109 109 C C C . n A 1 110 U 110 110 110 U U C . n A 1 111 G 111 111 111 G G C . n A 1 112 U 112 112 112 U U C . n A 1 113 U 113 113 113 U U C . n A 1 114 U 114 114 114 U U C . n A 1 115 U 115 115 115 U U C . n A 1 116 A 116 116 116 A A C . n A 1 117 C 117 117 117 C C C . n A 1 118 C 118 118 118 C C C . n A 1 119 G 119 119 119 G G C . n A 1 120 C 120 120 120 C C C . n A 1 121 G 121 121 121 G G C . n A 1 122 G 122 122 122 G G C . n A 1 123 G 123 123 123 G G C . n A 1 124 U 124 124 124 U U C . n A 1 125 C 125 125 125 C C C . n A 1 126 C 126 126 126 C C C . n A 1 127 A 127 127 127 A A C . n A 1 128 G 128 128 128 G G C . n A 1 129 G 129 129 129 G G C . n A 1 130 G 130 130 130 G G C . n A 1 131 U 131 131 131 U U C . n A 1 132 U 132 132 132 U U C . n A 1 133 C 133 133 133 C C C . n A 1 134 A 134 134 134 A A C . n A 1 135 A 135 135 135 A A C . n A 1 136 G 136 136 136 G G C . n A 1 137 U 137 137 137 U U C . n A 1 138 C 138 138 138 C C C . n A 1 139 C 139 139 139 C C C . n A 1 140 C 140 140 140 C C C . n A 1 141 U 141 141 141 U U C . n A 1 142 G 142 142 142 G G C . n A 1 143 U 143 143 143 U U C . n A 1 144 U 144 144 144 U U C . n A 1 145 C 145 145 145 C C C . n A 1 146 G 146 146 146 G G C . n A 1 147 G 147 147 147 G G C . n A 1 148 G 148 148 148 G G C . n A 1 149 C 149 149 149 C C C . n A 1 150 G 150 150 150 G G C . n A 1 151 C 151 151 151 C C C . n A 1 152 C 152 152 ? ? ? C . n A 1 153 A 153 153 ? ? ? C . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email kaychoi@iu.edu _pdbx_contact_author.name_first Kyung _pdbx_contact_author.name_last Choi _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-0865-1265 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-08-09 2 'Structure model' 1 1 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' citation 4 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation_author.identifier_ORCID' # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -x,y+1/2,-z # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 13.170362771 3.86521360991 31.3694585951 2.10598328175 ? 0.515535051394 ? -0.25896395748 ? 1.14802272285 ? -0.0152975020764 ? 0.159515867124 ? 1.95817035306 ? 0.672486729603 ? 1.87663106998 ? 1.27006752141 ? 0.946433396103 ? 1.87904065079 ? 0.039635370417 ? -0.484113487107 ? 0.240206752586 ? -0.181530675429 ? -0.0805543147201 ? -0.0920952502804 ? -0.323918273344 ? 0.113614978647 ? 0.0649476034842 ? 2 'X-RAY DIFFRACTION' ? refined 16.9985042691 6.33853832294 -4.53112279054 1.9321157861 ? 0.229967125806 ? -0.0516066787239 ? 1.26822478864 ? -0.0152272589761 ? 0.463900742688 ? 2.17702105215 ? 1.83987657403 ? -3.39583487552 ? 2.10262658762 ? -2.40629928806 ? 9.62726057832 ? 0.0939092776398 ? -0.259380600226 ? -0.102070961748 ? -0.0413974909709 ? -0.144924314347 ? -0.102011812727 ? 0.32611858728 ? 1.34550134044 ? 0.0609622630819 ? 3 'X-RAY DIFFRACTION' ? refined 42.734633188 4.50451329994 -16.847383233 1.13842683395 ? -0.329401782556 ? 0.489925479359 ? 3.08372415323 ? -0.305775827 ? 2.03502221736 ? 5.81312171066 ? -8.33711806245 ? -7.82907526405 ? 1.99994004378 ? 2.00029151969 ? 1.99964244165 ? 0.637165676343 ? 0.503340956844 ? -0.452428250191 ? -1.62558491832 ? -0.0182440343049 ? -1.52709615114 ? -0.848916974821 ? 0.385876662409 ? -0.623192661275 ? 4 'X-RAY DIFFRACTION' ? refined 27.5305727699 11.8307915618 -35.3057946639 1.86360135677 ? 0.174466589491 ? 0.458010831847 ? 1.02936416535 ? 0.275779485276 ? 0.128507208908 ? 6.42926973624 ? -1.43233321223 ? -1.02277295667 ? 3.92886151083 ? -0.46355293089 ? 7.9675403793 ? 0.272615253884 ? -0.462620967922 ? -0.449014753052 ? -0.462293790087 ? -0.029009240999 ? -1.18225125705 ? 0.99429553771 ? 1.68856692498 ? 0.0736338979414 ? 5 'X-RAY DIFFRACTION' ? refined 11.909342766 24.2055339568 -55.0817391723 1.56650520748 ? 0.190724845253 ? 0.184920371422 ? 1.79322527257 ? 0.0618257945763 ? 0.214950228029 ? 3.50534571246 ? -0.30218811193 ? -0.192017469913 ? 3.97695502309 ? -2.08653563095 ? 9.35051075303 ? 0.291064919328 ? 0.830292422538 ? 0.35622435087 ? -1.08806956793 ? 0.163163184469 ? 0.548584284759 ? -0.801011150673 ? -1.54523312519 ? -0.416487652914 ? 6 'X-RAY DIFFRACTION' ? refined 14.928106107 8.61739118643 -12.3738232977 1.6248994888 ? 0.0371498359936 ? 0.357170119963 ? 0.960958669384 ? 0.0818390033658 ? -0.0934784301001 ? 0.229161747493 ? 0.0845935656188 ? -0.0636619024743 ? 0.699419803159 ? -1.37509634255 ? 4.29381168819 ? 0.201516427071 ? -0.44403206936 ? -0.24558625527 ? 0.133849248672 ? 0.211294670878 ? 0.0958012131272 ? 0.493555942543 ? 0.021973525173 ? -0.172074924851 ? 7 'X-RAY DIFFRACTION' ? refined 14.7521981165 -2.3696207986 39.0806176792 0.78395841774 ? -0.249858193442 ? -0.19707130691 ? 0.961613560179 ? -0.0290228129333 ? 0.0765817511399 ? 1.4369431938 ? -0.765256710253 ? -0.581082188181 ? 1.35105616705 ? 0.553465170669 ? 4.05037243171 ? 0.471632837881 ? 0.135239784471 ? 0.338827464806 ? -0.203518109584 ? 0.219847646931 ? -0.464725231685 ? -0.842370894575 ? 0.70845580113 ? -0.463299068804 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 1 through 19 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 20 through 42 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 43 through 59 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 60 through 83 ) ; 5 'X-RAY DIFFRACTION' 5 ? ? ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 84 through 98 ) ; 6 'X-RAY DIFFRACTION' 6 ? ? ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 99 through 125 ) ; 7 'X-RAY DIFFRACTION' 7 ? ? ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 126 through 151 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.14_3260 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C G 44 ? A G 44 2 1 Y 1 C G 45 ? A G 45 3 1 Y 1 C G 46 ? A G 46 4 1 Y 1 C U 47 ? A U 47 5 1 Y 1 C U 48 ? A U 48 6 1 Y 1 C G 49 ? A G 49 7 1 Y 1 C A 50 ? A A 50 8 1 Y 1 C U 51 ? A U 51 9 1 Y 1 C C 52 ? A C 52 10 1 Y 1 C C 53 ? A C 53 11 1 Y 1 C C 54 ? A C 54 12 1 Y 1 C A 55 ? A A 55 13 1 Y 1 C C 56 ? A C 56 14 1 Y 1 C C 57 ? A C 57 15 1 Y 1 C C 58 ? A C 58 16 1 Y 1 C C 152 ? A C 152 17 1 Y 1 C A 153 ? A A 153 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 U OP3 O N N 111 U P P N N 112 U OP1 O N N 113 U OP2 O N N 114 U "O5'" O N N 115 U "C5'" C N N 116 U "C4'" C N R 117 U "O4'" O N N 118 U "C3'" C N S 119 U "O3'" O N N 120 U "C2'" C N R 121 U "O2'" O N N 122 U "C1'" C N R 123 U N1 N N N 124 U C2 C N N 125 U O2 O N N 126 U N3 N N N 127 U C4 C N N 128 U O4 O N N 129 U C5 C N N 130 U C6 C N N 131 U HOP3 H N N 132 U HOP2 H N N 133 U "H5'" H N N 134 U "H5''" H N N 135 U "H4'" H N N 136 U "H3'" H N N 137 U "HO3'" H N N 138 U "H2'" H N N 139 U "HO2'" H N N 140 U "H1'" H N N 141 U H3 H N N 142 U H5 H N N 143 U H6 H N N 144 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 U OP3 P sing N N 116 U OP3 HOP3 sing N N 117 U P OP1 doub N N 118 U P OP2 sing N N 119 U P "O5'" sing N N 120 U OP2 HOP2 sing N N 121 U "O5'" "C5'" sing N N 122 U "C5'" "C4'" sing N N 123 U "C5'" "H5'" sing N N 124 U "C5'" "H5''" sing N N 125 U "C4'" "O4'" sing N N 126 U "C4'" "C3'" sing N N 127 U "C4'" "H4'" sing N N 128 U "O4'" "C1'" sing N N 129 U "C3'" "O3'" sing N N 130 U "C3'" "C2'" sing N N 131 U "C3'" "H3'" sing N N 132 U "O3'" "HO3'" sing N N 133 U "C2'" "O2'" sing N N 134 U "C2'" "C1'" sing N N 135 U "C2'" "H2'" sing N N 136 U "O2'" "HO2'" sing N N 137 U "C1'" N1 sing N N 138 U "C1'" "H1'" sing N N 139 U N1 C2 sing N N 140 U N1 C6 sing N N 141 U C2 O2 doub N N 142 U C2 N3 sing N N 143 U N3 C4 sing N N 144 U N3 H3 sing N N 145 U C4 O4 doub N N 146 U C4 C5 sing N N 147 U C5 C6 doub N N 148 U C5 H5 sing N N 149 U C6 H6 sing N N 150 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8SP9 'double helix' 8SP9 'a-form double helix' 8SP9 'parallel strands' 8SP9 'hairpin loop' 8SP9 'bulge loop' 8SP9 'mismatched base pair' 8SP9 'four-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 149 1_555 -0.203 -0.195 0.626 -0.766 5.108 1.716 1 C_G1:C149_C C 1 ? C 149 ? 19 1 1 A C 2 1_555 A G 148 1_555 0.207 -0.207 0.667 3.658 5.768 3.162 2 C_C2:G148_C C 2 ? C 148 ? 19 1 1 A C 3 1_555 A G 147 1_555 0.156 -0.138 0.101 0.028 4.937 -1.871 3 C_C3:G147_C C 3 ? C 147 ? 19 1 1 A C 4 1_555 A G 146 1_555 0.188 -0.177 0.481 5.371 4.242 0.610 4 C_C4:G146_C C 4 ? C 146 ? 19 1 1 A G 5 1_555 A C 145 1_555 -0.132 -0.211 -0.758 -9.124 -1.556 -0.827 5 C_G5:C145_C C 5 ? C 145 ? 19 1 1 A G 6 1_555 A U 144 1_555 -1.812 -0.386 -0.354 -4.434 0.613 -11.094 6 C_G6:U144_C C 6 ? C 144 ? 28 1 1 A A 7 1_555 A U 143 1_555 0.066 -0.060 -0.177 1.139 0.041 -0.441 7 C_A7:U143_C C 7 ? C 143 ? 20 1 1 A C 126 1_555 A G 142 1_555 0.165 -0.139 -0.015 3.357 2.091 0.423 8 C_C126:G142_C C 126 ? C 142 ? 19 1 1 A A 127 1_555 A U 141 1_555 0.115 -0.107 -0.733 -13.349 -0.495 -1.074 9 C_A127:U141_C C 127 ? C 141 ? 20 1 1 A G 128 1_555 A C 140 1_555 -0.182 -0.147 -0.090 -6.361 5.883 0.615 10 C_G128:C140_C C 128 ? C 140 ? 19 1 1 A G 129 1_555 A C 139 1_555 -0.175 -0.148 0.051 3.379 5.512 -1.176 11 C_G129:C139_C C 129 ? C 139 ? 19 1 1 A G 130 1_555 A C 138 1_555 -0.101 -0.220 -1.107 -13.838 0.807 -1.452 12 C_G130:C138_C C 130 ? C 138 ? 19 1 1 A U 131 1_555 A A 135 1_555 4.649 -0.934 -0.153 -1.079 17.655 -115.777 13 C_U131:A135_C C 131 ? C 135 ? ? ? 1 A U 132 1_555 A G 18 1_555 0.938 -5.008 -0.205 12.746 12.917 -100.054 14 C_U132:G18_C C 132 ? C 18 ? ? 6 1 A G 94 1_555 A C 91 1_555 0.901 7.486 0.129 20.752 -3.084 123.483 15 C_G94:C91_C C 94 ? C 91 ? ? 6 1 A G 95 1_555 A U 90 1_555 -2.251 -0.880 -1.009 -4.235 7.704 -11.455 16 C_G95:U90_C C 95 ? C 90 ? 28 1 1 A U 96 1_555 A A 89 1_555 -0.240 -0.106 -1.031 7.560 5.769 -9.291 17 C_U96:A89_C C 96 ? C 89 ? 20 1 1 A A 97 1_555 A U 88 1_555 0.057 -0.170 -0.163 4.311 -6.711 -4.550 18 C_A97:U88_C C 97 ? C 88 ? 20 1 1 A C 98 1_555 A G 87 1_555 0.238 -0.188 -0.065 3.757 -10.098 -2.077 19 C_C98:G87_C C 98 ? C 87 ? 19 1 1 A C 99 1_555 A G 86 1_555 0.188 -0.141 0.102 5.455 -3.958 -1.265 20 C_C99:G86_C C 99 ? C 86 ? 19 1 1 A U 100 1_555 A U 85 1_555 2.909 -2.098 -0.002 4.697 -12.847 -7.542 21 C_U100:U85_C C 100 ? C 85 ? 16 1 1 A U 101 1_555 A C 84 1_555 0.867 -1.872 0.633 1.892 -12.929 11.182 22 C_U101:C84_C C 101 ? C 84 ? 18 1 1 A U 102 1_555 A U 83 1_555 -2.352 -2.119 0.605 -3.060 -1.613 -4.281 23 C_U102:U83_C C 102 ? C 83 ? 16 1 1 A G 103 1_555 A C 82 1_555 -0.183 -0.184 0.576 -2.207 -0.613 0.420 24 C_G103:C82_C C 103 ? C 82 ? 19 1 1 A U 104 1_555 A A 81 1_555 -0.012 -0.159 0.556 -1.211 -0.411 3.091 25 C_U104:A81_C C 104 ? C 81 ? 20 1 1 A G 105 1_555 A C 80 1_555 -0.144 -0.001 -0.094 3.803 9.581 1.224 26 C_G105:C80_C C 105 ? C 80 ? 19 1 1 A C 106 1_555 A G 79 1_555 0.161 -0.139 -0.540 9.497 1.040 -0.528 27 C_C106:G79_C C 106 ? C 79 ? 19 1 1 A G 107 1_555 A C 76 1_555 -0.163 -0.188 -0.579 -1.707 2.846 -1.008 28 C_G107:C76_C C 107 ? C 76 ? 19 1 1 A C 108 1_555 A G 75 1_555 0.179 -0.202 -0.667 6.893 -1.752 0.209 29 C_C108:G75_C C 108 ? C 75 ? 19 1 1 A C 109 1_555 A G 38 1_555 0.167 -0.124 -0.203 -3.613 1.605 -0.206 30 C_C109:G38_C C 109 ? C 38 ? 19 1 1 A U 110 1_555 A A 37 1_555 -0.034 -0.052 -0.106 5.254 -3.857 2.244 31 C_U110:A37_C C 110 ? C 37 ? 20 1 1 A G 111 1_555 A C 36 1_555 -0.159 -0.133 0.388 -3.170 -3.057 0.936 32 C_G111:C36_C C 111 ? C 36 ? 19 1 1 A U 112 1_555 A A 35 1_555 -0.037 -0.130 0.525 -3.004 0.688 0.877 33 C_U112:A35_C C 112 ? C 35 ? 20 1 1 A U 113 1_555 A A 34 1_555 0.022 -0.123 0.451 0.363 2.086 3.436 34 C_U113:A34_C C 113 ? C 34 ? 20 1 1 A U 114 1_555 A A 33 1_555 0.002 -0.147 0.432 -2.365 1.655 -3.169 35 C_U114:A33_C C 114 ? C 33 ? 20 1 1 A U 115 1_555 A A 32 1_555 -0.069 -0.108 0.403 0.888 1.158 1.420 36 C_U115:A32_C C 115 ? C 32 ? 20 1 1 A A 116 1_555 A U 31 1_555 0.061 -0.060 -0.337 -1.382 1.124 0.055 37 C_A116:U31_C C 116 ? C 31 ? 20 1 1 A C 117 1_555 A G 30 1_555 0.139 -0.145 -0.337 3.737 0.459 -0.317 38 C_C117:G30_C C 117 ? C 30 ? 19 1 1 A C 118 1_555 A G 29 1_555 0.187 -0.137 -0.129 2.908 -5.861 0.769 39 C_C118:G29_C C 118 ? C 29 ? 19 1 1 A G 119 1_555 A C 28 1_555 -0.198 -0.139 -0.336 2.118 -4.139 1.160 40 C_G119:C28_C C 119 ? C 28 ? 19 1 1 A C 120 1_555 A G 27 1_555 0.127 -0.192 -0.793 5.835 -1.645 0.537 41 C_C120:G27_C C 120 ? C 27 ? 19 1 1 A G 121 1_555 A A 26 1_555 -0.184 2.106 -0.458 -12.509 -11.037 -58.367 42 C_G121:A26_C C 121 ? C 26 ? ? ? 1 A G 10 1_555 A C 25 1_555 -0.192 -0.148 -0.649 -10.606 -3.578 0.126 43 C_G10:C25_C C 10 ? C 25 ? 19 1 1 A C 11 1_555 A G 24 1_555 0.183 -0.156 -0.050 -6.725 3.565 -1.421 44 C_C11:G24_C C 11 ? C 24 ? 19 1 1 A U 12 1_555 A A 23 1_555 -0.077 -0.046 0.298 -0.383 7.084 -5.189 45 C_U12:A23_C C 12 ? C 23 ? 20 1 1 A C 13 1_555 A G 22 1_555 0.157 -0.252 0.725 3.385 1.059 -0.182 46 C_C13:G22_C C 13 ? C 22 ? 19 1 1 A A 14 1_555 A U 8 1_555 -4.903 -0.686 0.403 -7.957 18.360 -121.804 47 C_A14:U8_C C 14 ? C 8 ? ? ? 1 A G 15 1_555 A C 125 1_555 0.270 2.513 0.494 4.644 13.571 159.611 48 C_G15:C125_C C 15 ? C 125 ? 22 2 1 A G 19 1_555 A C 133 1_555 -0.191 -0.142 0.061 -16.559 -10.730 -1.568 49 C_G19:C133_C C 19 ? C 133 ? 19 1 1 A A 59 1_555 A U 43 1_555 -0.018 -0.156 0.551 1.019 -0.218 -0.667 50 C_A59:U43_C C 59 ? C 43 ? 20 1 1 A C 60 1_555 A G 42 1_555 0.098 -0.315 -0.843 -2.771 2.650 -2.600 51 C_C60:G42_C C 60 ? C 42 ? 19 1 1 A A 61 1_555 A U 41 1_555 0.111 -0.064 0.305 4.342 -3.632 -9.791 52 C_A61:U41_C C 61 ? C 41 ? 20 1 1 A G 62 1_555 A C 40 1_555 -0.155 -0.192 0.155 2.934 -4.690 -2.238 53 C_G62:C40_C C 62 ? C 40 ? 19 1 1 A G 63 1_555 A C 39 1_555 -0.158 -0.112 -0.162 -2.866 -3.559 1.405 54 C_G63:C39_C C 63 ? C 39 ? 19 1 1 A G 64 1_555 A C 74 1_555 -0.192 -0.152 -0.441 -5.919 3.918 -1.419 55 C_G64:C74_C C 64 ? C 74 ? 19 1 1 A C 65 1_555 A G 73 1_555 0.197 -0.127 0.314 1.611 2.514 -0.257 56 C_C65:G73_C C 65 ? C 73 ? 19 1 1 A C 66 1_555 A G 72 1_555 0.130 -0.131 0.358 -1.653 -1.906 0.548 57 C_C66:G72_C C 66 ? C 72 ? 19 1 1 A C 67 1_555 A G 71 1_555 0.146 -0.185 0.579 2.864 -1.159 0.577 58 C_C67:G71_C C 67 ? C 71 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 149 1_555 A C 2 1_555 A G 148 1_555 0.281 -1.695 3.281 -1.549 2.113 33.426 -3.281 -0.738 3.155 3.667 2.688 33.526 1 CC_G1C2:G148C149_CC C 1 ? C 149 ? C 2 ? C 148 ? 1 A C 2 1_555 A G 148 1_555 A C 3 1_555 A G 147 1_555 -0.188 -2.111 3.508 1.616 2.013 33.384 -4.013 0.606 3.366 3.498 -2.808 33.481 2 CC_C2C3:G147G148_CC C 2 ? C 148 ? C 3 ? C 147 ? 1 A C 3 1_555 A G 147 1_555 A C 4 1_555 A G 146 1_555 -0.166 -1.622 3.216 -1.201 4.363 30.772 -3.819 0.091 2.967 8.166 2.248 31.095 3 CC_C3C4:G146G147_CC C 3 ? C 147 ? C 4 ? C 146 ? 1 A C 4 1_555 A G 146 1_555 A G 5 1_555 A C 145 1_555 -0.137 -2.304 3.437 8.917 18.985 25.173 -6.818 1.521 1.309 36.519 -17.152 32.657 4 CC_C4G5:C145G146_CC C 4 ? C 146 ? C 5 ? C 145 ? 1 A G 5 1_555 A C 145 1_555 A G 6 1_555 A U 144 1_555 -0.010 -1.482 3.140 -4.290 5.132 24.315 -4.770 -1.126 2.736 11.900 9.946 25.205 5 CC_G5G6:U144C145_CC C 5 ? C 145 ? C 6 ? C 144 ? 1 A G 6 1_555 A U 144 1_555 A A 7 1_555 A U 143 1_555 0.016 -1.387 3.016 -2.086 5.015 42.767 -2.332 -0.206 2.840 6.843 2.847 43.095 6 CC_G6A7:U143U144_CC C 6 ? C 144 ? C 7 ? C 143 ? 1 A A 7 1_555 A U 143 1_555 A C 126 1_555 A G 142 1_555 0.482 -2.268 3.199 1.932 5.677 33.438 -4.725 -0.539 2.810 9.768 -3.324 33.957 7 CC_A7C126:G142U143_CC C 7 ? C 143 ? C 126 ? C 142 ? 1 A C 126 1_555 A G 142 1_555 A A 127 1_555 A U 141 1_555 -0.476 -1.725 3.438 5.861 15.084 33.882 -4.542 1.463 2.374 24.241 -9.419 37.446 8 CC_C126A127:U141G142_CC C 126 ? C 142 ? C 127 ? C 141 ? 1 A A 127 1_555 A U 141 1_555 A G 128 1_555 A C 140 1_555 -0.275 -1.309 3.480 -2.491 4.104 28.341 -3.595 -0.027 3.274 8.306 5.043 28.736 9 CC_A127G128:C140U141_CC C 127 ? C 141 ? C 128 ? C 140 ? 1 A G 128 1_555 A C 140 1_555 A G 129 1_555 A C 139 1_555 0.818 -1.774 2.977 -0.169 4.486 29.033 -4.337 -1.644 2.674 8.882 0.335 29.371 10 CC_G128G129:C139C140_CC C 128 ? C 140 ? C 129 ? C 139 ? 1 A G 129 1_555 A C 139 1_555 A G 130 1_555 A C 138 1_555 0.564 -2.098 3.648 9.912 10.845 34.844 -4.717 0.474 2.938 17.196 -15.717 37.726 11 CC_G129G130:C138C139_CC C 129 ? C 139 ? C 130 ? C 138 ? 1 A G 130 1_555 A C 138 1_555 A U 131 1_555 A A 135 1_555 -2.802 -2.262 3.025 4.093 4.925 87.048 -1.735 2.110 2.812 3.572 -2.968 87.237 12 CC_G130U131:A135C138_CC C 130 ? C 138 ? C 131 ? C 135 ? 1 A U 131 1_555 A A 135 1_555 A U 132 1_555 A G 18 1_555 2.367 -2.163 3.648 0.819 0.176 36.060 -3.521 -3.693 3.689 0.285 -1.323 36.069 13 CC_U131U132:G18A135_CC C 131 ? C 135 ? C 132 ? C 18 ? 1 A G 94 1_555 A C 91 1_555 A G 95 1_555 A U 90 1_555 -2.305 -3.840 0.733 100.936 -123.077 63.838 -1.427 1.590 1.665 -65.299 -53.552 162.350 14 CC_G94G95:U90C91_CC C 94 ? C 91 ? C 95 ? C 90 ? 1 A G 95 1_555 A U 90 1_555 A U 96 1_555 A A 89 1_555 -0.632 -1.044 3.208 0.247 3.926 40.649 -1.913 0.932 3.094 5.635 -0.354 40.831 15 CC_G95U96:A89U90_CC C 95 ? C 90 ? C 96 ? C 89 ? 1 A U 96 1_555 A A 89 1_555 A A 97 1_555 A U 88 1_555 -1.013 -1.443 3.567 -15.494 9.734 34.060 -3.519 -0.587 3.207 15.324 24.393 38.535 16 CC_U96A97:U88A89_CC C 96 ? C 89 ? C 97 ? C 88 ? 1 A A 97 1_555 A U 88 1_555 A C 98 1_555 A G 87 1_555 -0.082 -1.451 3.164 -1.857 -1.042 39.909 -2.006 -0.088 3.200 -1.525 2.718 39.963 17 CC_A97C98:G87U88_CC C 97 ? C 88 ? C 98 ? C 87 ? 1 A C 98 1_555 A G 87 1_555 A C 99 1_555 A G 86 1_555 -1.052 -1.972 3.143 -4.125 16.746 23.574 -6.856 1.368 1.582 35.529 8.752 29.137 18 CC_C98C99:G86G87_CC C 98 ? C 87 ? C 99 ? C 86 ? 1 A C 99 1_555 A G 86 1_555 A U 100 1_555 A U 85 1_555 -0.482 -1.060 3.351 -1.213 3.506 43.352 -1.773 0.531 3.271 4.736 1.639 43.502 19 CC_C99U100:U85G86_CC C 99 ? C 86 ? C 100 ? C 85 ? 1 A U 100 1_555 A U 85 1_555 A U 101 1_555 A C 84 1_555 1.167 -2.469 3.033 0.222 1.043 22.444 -6.687 -2.922 2.928 2.678 -0.569 22.469 20 CC_U100U101:C84U85_CC C 100 ? C 85 ? C 101 ? C 84 ? 1 A U 101 1_555 A C 84 1_555 A U 102 1_555 A U 83 1_555 -1.177 -1.916 3.069 -0.943 13.806 28.432 -5.616 2.021 1.985 26.235 1.792 31.558 21 CC_U101U102:U83C84_CC C 101 ? C 84 ? C 102 ? C 83 ? 1 A U 102 1_555 A U 83 1_555 A G 103 1_555 A C 82 1_555 0.628 -1.255 3.141 2.336 3.009 40.567 -2.120 -0.657 3.074 4.328 -3.360 40.738 22 CC_U102G103:C82U83_CC C 102 ? C 83 ? C 103 ? C 82 ? 1 A G 103 1_555 A C 82 1_555 A U 104 1_555 A A 81 1_555 -0.135 -2.109 3.144 1.459 2.382 33.376 -4.028 0.460 2.983 4.138 -2.534 33.489 23 CC_G103U104:A81C82_CC C 103 ? C 82 ? C 104 ? C 81 ? 1 A U 104 1_555 A A 81 1_555 A G 105 1_555 A C 80 1_555 0.217 -1.686 2.695 5.824 14.164 31.878 -4.310 0.271 1.818 24.126 -9.920 35.280 24 CC_U104G105:C80A81_CC C 104 ? C 81 ? C 105 ? C 80 ? 1 A G 105 1_555 A C 80 1_555 A C 106 1_555 A G 79 1_555 0.295 -1.834 3.150 2.191 2.803 34.462 -3.486 -0.178 3.009 4.715 -3.687 34.640 25 CC_G105C106:G79C80_CC C 105 ? C 80 ? C 106 ? C 79 ? 1 A C 106 1_555 A G 79 1_555 A G 107 1_555 A C 76 1_555 1.780 -1.643 3.723 -4.444 9.856 44.680 -3.013 -2.691 3.131 12.745 5.746 45.905 26 CC_C106G107:C76G79_CC C 106 ? C 79 ? C 107 ? C 76 ? 1 A G 107 1_555 A C 76 1_555 A C 108 1_555 A G 75 1_555 0.440 -1.644 3.217 -1.420 2.098 35.090 -3.022 -0.933 3.097 3.474 2.352 35.178 27 CC_G107C108:G75C76_CC C 107 ? C 76 ? C 108 ? C 75 ? 1 A C 108 1_555 A G 75 1_555 A C 109 1_555 A G 38 1_555 0.294 -2.075 3.445 -1.417 11.505 36.659 -4.534 -0.617 2.684 17.754 2.186 38.388 28 CC_C108C109:G38G75_CC C 108 ? C 75 ? C 109 ? C 38 ? 1 A C 109 1_555 A G 38 1_555 A U 110 1_555 A A 37 1_555 0.439 -1.363 3.230 -1.232 5.066 29.101 -3.693 -1.110 2.935 9.982 2.428 29.554 29 CC_C109U110:A37G38_CC C 109 ? C 38 ? C 110 ? C 37 ? 1 A U 110 1_555 A A 37 1_555 A G 111 1_555 A C 36 1_555 0.110 -1.867 3.045 -3.034 15.746 29.322 -5.333 -0.592 1.815 28.571 5.506 33.336 30 CC_U110G111:C36A37_CC C 110 ? C 37 ? C 111 ? C 36 ? 1 A G 111 1_555 A C 36 1_555 A U 112 1_555 A A 35 1_555 -0.222 -1.665 3.130 -1.323 3.134 34.321 -3.263 0.183 2.977 5.295 2.235 34.484 31 CC_G111U112:A35C36_CC C 111 ? C 36 ? C 112 ? C 35 ? 1 A U 112 1_555 A A 35 1_555 A U 113 1_555 A A 34 1_555 0.334 -1.512 3.014 1.603 5.810 29.671 -3.932 -0.353 2.690 11.201 -3.091 30.263 32 CC_U112U113:A34A35_CC C 112 ? C 35 ? C 113 ? C 34 ? 1 A U 113 1_555 A A 34 1_555 A U 114 1_555 A A 33 1_555 0.195 -1.471 3.194 3.035 3.550 37.418 -2.717 0.075 3.053 5.508 -4.708 37.698 33 CC_U113U114:A33A34_CC C 113 ? C 34 ? C 114 ? C 33 ? 1 A U 114 1_555 A A 33 1_555 A U 115 1_555 A A 32 1_555 1.204 -1.231 3.272 1.660 3.077 35.362 -2.463 -1.732 3.209 5.050 -2.724 35.529 34 CC_U114U115:A32A33_CC C 114 ? C 33 ? C 115 ? C 32 ? 1 A U 115 1_555 A A 32 1_555 A A 116 1_555 A U 31 1_555 -0.707 -1.370 3.035 4.731 18.695 27.516 -4.819 1.844 1.658 34.455 -8.719 33.494 35 CC_U115A116:U31A32_CC C 115 ? C 32 ? C 116 ? C 31 ? 1 A A 116 1_555 A U 31 1_555 A C 117 1_555 A G 30 1_555 0.240 -1.747 3.100 -0.111 2.520 28.915 -4.000 -0.500 2.939 5.035 0.221 29.023 36 CC_A116C117:G30U31_CC C 116 ? C 31 ? C 117 ? C 30 ? 1 A C 117 1_555 A G 30 1_555 A C 118 1_555 A G 29 1_555 0.031 -1.825 3.059 -0.213 5.777 35.959 -3.638 -0.076 2.742 9.283 0.342 36.405 37 CC_C117C118:G29G30_CC C 117 ? C 30 ? C 118 ? C 29 ? 1 A C 118 1_555 A G 29 1_555 A G 119 1_555 A C 28 1_555 -0.213 -1.496 3.038 -0.979 20.169 29.694 -4.759 0.234 1.715 34.755 1.687 35.781 38 CC_C118G119:C28G29_CC C 118 ? C 29 ? C 119 ? C 28 ? 1 A G 119 1_555 A C 28 1_555 A C 120 1_555 A G 27 1_555 -1.116 -1.178 3.152 0.094 3.851 40.107 -2.122 1.631 3.029 5.599 -0.137 40.284 39 CC_G119C120:G27C28_CC C 119 ? C 28 ? C 120 ? C 27 ? 1 A C 120 1_555 A G 27 1_555 A G 121 1_555 A A 26 1_555 -3.217 -2.000 3.799 -1.677 0.429 33.970 -3.500 5.184 3.924 0.734 2.867 34.013 40 CC_C120G121:A26G27_CC C 120 ? C 27 ? C 121 ? C 26 ? 1 A G 121 1_555 A A 26 1_555 A G 10 1_555 A C 25 1_555 -1.437 -4.503 3.947 17.461 17.080 49.788 -5.820 2.527 1.860 19.028 -19.452 55.112 41 CC_G121G10:C25A26_CC C 121 ? C 26 ? C 10 ? C 25 ? 1 A G 10 1_555 A C 25 1_555 A C 11 1_555 A G 24 1_555 -0.972 -1.502 3.121 -3.829 2.838 38.452 -2.596 1.018 3.086 4.289 5.787 38.735 42 CC_G10C11:G24C25_CC C 10 ? C 25 ? C 11 ? C 24 ? 1 A C 11 1_555 A G 24 1_555 A U 12 1_555 A A 23 1_555 -0.294 -1.265 3.090 0.391 7.037 32.126 -3.323 0.581 2.755 12.527 -0.696 32.870 43 CC_C11U12:A23G24_CC C 11 ? C 24 ? C 12 ? C 23 ? 1 A U 12 1_555 A A 23 1_555 A C 13 1_555 A G 22 1_555 2.052 -1.724 3.135 2.643 9.227 28.448 -5.054 -3.471 2.635 18.134 -5.195 29.992 44 CC_U12C13:G22A23_CC C 12 ? C 23 ? C 13 ? C 22 ? 1 A C 13 1_555 A G 22 1_555 A A 14 1_555 A U 8 1_555 -2.189 -0.998 3.262 5.238 -8.083 59.513 -0.601 2.437 3.176 -8.086 -5.239 60.217 45 CC_C13A14:U8G22_CC C 13 ? C 22 ? C 14 ? C 8 ? 1 A A 14 1_555 A U 8 1_555 A G 15 1_555 A C 125 1_555 2.802 -2.644 2.628 -12.605 2.623 -65.034 2.328 2.114 3.157 -2.415 -11.605 -66.158 46 CC_A14G15:C125U8_CC C 14 ? C 8 ? C 15 ? C 125 ? 1 A A 59 1_555 A U 43 1_555 A C 60 1_555 A G 42 1_555 0.020 -1.173 4.441 2.650 -2.200 32.751 -1.556 0.583 4.496 -3.889 -4.684 32.927 47 CC_A59C60:G42U43_CC C 59 ? C 43 ? C 60 ? C 42 ? 1 A C 60 1_555 A G 42 1_555 A A 61 1_555 A U 41 1_555 -1.628 -2.388 3.824 -2.097 -5.257 24.986 -3.502 2.922 4.346 -11.954 4.770 25.609 48 CC_C60A61:U41G42_CC C 60 ? C 42 ? C 61 ? C 41 ? 1 A A 61 1_555 A U 41 1_555 A G 62 1_555 A C 40 1_555 1.048 -1.866 3.785 4.991 1.753 33.315 -3.549 -0.861 3.797 3.034 -8.638 33.721 49 CC_A61G62:C40U41_CC C 61 ? C 41 ? C 62 ? C 40 ? 1 A G 62 1_555 A C 40 1_555 A G 63 1_555 A C 39 1_555 1.245 -1.792 3.383 4.104 -1.375 33.338 -2.858 -1.437 3.576 -2.385 -7.116 33.610 50 CC_G62G63:C39C40_CC C 62 ? C 40 ? C 63 ? C 39 ? 1 A G 63 1_555 A C 39 1_555 A G 64 1_555 A C 74 1_555 -0.525 -2.071 3.219 -2.863 9.642 37.733 -4.168 0.470 2.662 14.593 4.334 39.003 51 CC_G63G64:C74C39_CC C 63 ? C 39 ? C 64 ? C 74 ? 1 A G 64 1_555 A C 74 1_555 A C 65 1_555 A G 73 1_555 1.078 -2.208 3.176 -5.392 5.315 28.115 -5.419 -3.184 2.480 10.697 10.852 29.096 52 CC_G64C65:G73C74_CC C 64 ? C 74 ? C 65 ? C 73 ? 1 A C 65 1_555 A G 73 1_555 A C 66 1_555 A G 72 1_555 0.001 -2.172 3.172 -0.048 5.853 34.992 -4.352 -0.009 2.784 9.650 0.079 35.463 53 CC_C65C66:G72G73_CC C 65 ? C 73 ? C 66 ? C 72 ? 1 A C 66 1_555 A G 72 1_555 A C 67 1_555 A G 71 1_555 0.137 -1.969 3.027 0.120 3.758 26.524 -5.111 -0.268 2.727 8.138 -0.260 26.784 54 CC_C66C67:G71G72_CC C 66 ? C 72 ? C 67 ? C 71 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' AI087856 1 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' AI157336 2 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 7LYF _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'P 1 21 1' _space_group.name_Hall 'P 2yb' _space_group.IT_number 4 _space_group.crystal_system monoclinic _space_group.id 1 #