HEADER IMMUNE SYSTEM/AGONIST 10-MAY-23 8STH TITLE HUMAN STING WITH DIABZI AGONIST 15 COMPND MOL_ID: 1; COMPND 2 MOLECULE: STIMULATOR OF INTERFERON GENES PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CYCLIC DINUCLEOTIDE-BINDING DOMAIN; COMPND 5 SYNONYM: HSTING,ENDOPLASMIC RETICULUM INTERFERON STIMULATOR,ERIS, COMPND 6 MEDIATOR OF IRF3 ACTIVATION,HMITA,TRANSMEMBRANE PROTEIN 173; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: STING1, ERIS, MITA, STING, TMEM173; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS AGONIST, STING, IMMUNE SYSTEM, IMMUNE SYSTEM-AGONIST COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.R.DUVALL,R.A.BUKHALID REVDAT 3 16-AUG-23 8STH 1 JRNL REVDAT 2 02-AUG-23 8STH 1 JRNL REVDAT 1 26-JUL-23 8STH 0 JRNL AUTH J.R.DUVALL,J.D.THOMAS,R.A.BUKHALID,K.C.CATCOTT,K.W.BENTLEY, JRNL AUTH 2 S.D.COLLINS,T.EITAS,B.D.JONES,E.W.KELLEHER,K.LANCASTER, JRNL AUTH 3 M.PROTOPOPOVA,S.S.RAY,E.TER-OVANESYAN,L.XU,L.YANG,J.ZURITA, JRNL AUTH 4 M.DAMELIN,D.TOADER,T.B.LOWINGER JRNL TITL DISCOVERY AND OPTIMIZATION OF A STING AGONIST PLATFORM FOR JRNL TITL 2 APPLICATION IN ANTIBODY DRUG CONJUGATES. JRNL REF J.MED.CHEM. V. 66 10715 2023 JRNL REFN ISSN 0022-2623 JRNL PMID 37486969 JRNL DOI 10.1021/ACS.JMEDCHEM.3C00907 REMARK 2 REMARK 2 RESOLUTION. 1.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0155 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 79.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 14989 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.400 REMARK 3 FREE R VALUE TEST SET COUNT : 1745 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.97 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1074 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.10 REMARK 3 BIN R VALUE (WORKING SET) : 0.4380 REMARK 3 BIN FREE R VALUE SET COUNT : 132 REMARK 3 BIN FREE R VALUE : 0.4080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1404 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 57 REMARK 3 SOLVENT ATOMS : 115 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.06000 REMARK 3 B22 (A**2) : 0.06000 REMARK 3 B33 (A**2) : -0.13000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.186 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.168 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.120 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.453 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1569 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1432 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2143 ; 1.640 ; 1.962 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3272 ; 1.275 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 191 ; 6.302 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 79 ;34.377 ;24.304 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 247 ;15.158 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;15.906 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 223 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1854 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 377 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 753 ; 3.627 ; 3.333 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 754 ; 3.625 ; 3.333 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 947 ; 5.377 ; 5.564 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 948 ; 5.375 ; 5.564 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 816 ; 4.173 ; 3.674 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 816 ; 4.171 ; 3.675 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1197 ; 6.019 ; 6.026 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 1634 ; 8.885 ;28.482 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 1615 ; 8.846 ;27.890 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 153 A 225 REMARK 3 RESIDUE RANGE : A 243 A 339 REMARK 3 ORIGIN FOR THE GROUP (A): 30.581 -8.510 8.509 REMARK 3 T TENSOR REMARK 3 T11: 0.0846 T22: 0.0679 REMARK 3 T33: 0.0914 T12: -0.0165 REMARK 3 T13: -0.0108 T23: 0.0072 REMARK 3 L TENSOR REMARK 3 L11: 1.2513 L22: 6.2702 REMARK 3 L33: 1.5438 L12: 0.5699 REMARK 3 L13: 0.0345 L23: 0.0339 REMARK 3 S TENSOR REMARK 3 S11: -0.0381 S12: 0.0694 S13: 0.2969 REMARK 3 S21: -0.2181 S22: -0.0177 S23: -0.0593 REMARK 3 S31: -0.3448 S32: 0.0624 S33: 0.0559 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 226 A 242 REMARK 3 ORIGIN FOR THE GROUP (A): 14.388 -8.114 4.849 REMARK 3 T TENSOR REMARK 3 T11: 0.1505 T22: 0.2232 REMARK 3 T33: 0.2473 T12: 0.0497 REMARK 3 T13: -0.0541 T23: -0.0020 REMARK 3 L TENSOR REMARK 3 L11: 4.8986 L22: 10.0742 REMARK 3 L33: 2.6285 L12: 5.1227 REMARK 3 L13: -0.9930 L23: -0.0813 REMARK 3 S TENSOR REMARK 3 S11: -0.0883 S12: 0.4965 S13: 0.1806 REMARK 3 S21: -0.8471 S22: -0.0087 S23: 0.6692 REMARK 3 S31: -0.1217 S32: -0.5487 S33: 0.0971 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8STH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-MAY-23. REMARK 100 THE DEPOSITION ID IS D_1000274228. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-SEP-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16735 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.970 REMARK 200 RESOLUTION RANGE LOW (A) : 79.580 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.6600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.22 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.44500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350; AMMONIUM TARTRATE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 18.09750 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 56.27500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 56.27500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 9.04875 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 56.27500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 56.27500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 27.14625 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 56.27500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 56.27500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 9.04875 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 56.27500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 56.27500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 27.14625 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 18.09750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 18.09750 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 577 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 187 REMARK 465 ASN A 188 REMARK 465 LEU A 189 REMARK 465 LEU A 190 REMARK 465 ARG A 191 REMARK 465 THR A 229 REMARK 465 GLY A 230 REMARK 465 ASP A 231 REMARK 465 ARG A 232 REMARK 465 ALA A 233 REMARK 465 GLY A 234 REMARK 465 ILE A 235 REMARK 465 LYS A 236 REMARK 465 ASP A 237 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 PHE A 153 CG CD1 CD2 CE1 CE2 CZ REMARK 480 GLN A 176 CD OE1 NE2 REMARK 480 ARG A 180 CZ NH1 NH2 REMARK 480 TYR A 186 CG CD1 CD2 CE1 CE2 CZ OH REMARK 480 ASN A 211 CG OD1 ND2 REMARK 480 LEU A 212 CD1 CD2 REMARK 480 SER A 213 OG REMARK 480 GLN A 228 CG CD OE1 NE2 REMARK 480 ARG A 238 CG CD NE CZ NH1 NH2 REMARK 480 GLU A 337 CG CD OE1 OE2 REMARK 480 LYS A 338 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TYR A 186 CA - CB - CG ANGL. DEV. = 14.3 DEGREES REMARK 500 ASP A 205 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 LEU A 212 CB - CG - CD2 ANGL. DEV. = 11.3 DEGREES REMARK 500 ARG A 253 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 284 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 167 -70.42 -137.44 REMARK 500 HIS A 185 -68.14 -91.79 REMARK 500 ALA A 302 78.69 -114.19 REMARK 500 ASN A 307 39.58 90.75 REMARK 500 REMARK 500 REMARK: NULL DBREF 8STH A 153 339 UNP Q86WV6 STING_HUMAN 153 339 SEQADV 8STH ARG A 232 UNP Q86WV6 HIS 232 VARIANT SEQRES 1 A 187 PHE ASN VAL ALA HIS GLY LEU ALA TRP SER TYR TYR ILE SEQRES 2 A 187 GLY TYR LEU ARG LEU ILE LEU PRO GLU LEU GLN ALA ARG SEQRES 3 A 187 ILE ARG THR TYR ASN GLN HIS TYR ASN ASN LEU LEU ARG SEQRES 4 A 187 GLY ALA VAL SER GLN ARG LEU TYR ILE LEU LEU PRO LEU SEQRES 5 A 187 ASP CYS GLY VAL PRO ASP ASN LEU SER MET ALA ASP PRO SEQRES 6 A 187 ASN ILE ARG PHE LEU ASP LYS LEU PRO GLN GLN THR GLY SEQRES 7 A 187 ASP ARG ALA GLY ILE LYS ASP ARG VAL TYR SER ASN SER SEQRES 8 A 187 ILE TYR GLU LEU LEU GLU ASN GLY GLN ARG ALA GLY THR SEQRES 9 A 187 CYS VAL LEU GLU TYR ALA THR PRO LEU GLN THR LEU PHE SEQRES 10 A 187 ALA MET SER GLN TYR SER GLN ALA GLY PHE SER ARG GLU SEQRES 11 A 187 ASP ARG LEU GLU GLN ALA LYS LEU PHE CYS ARG THR LEU SEQRES 12 A 187 GLU ASP ILE LEU ALA ASP ALA PRO GLU SER GLN ASN ASN SEQRES 13 A 187 CYS ARG LEU ILE ALA TYR GLN GLU PRO ALA ASP ASP SER SEQRES 14 A 187 SER PHE SER LEU SER GLN GLU VAL LEU ARG HIS LEU ARG SEQRES 15 A 187 GLN GLU GLU LYS GLU HET WWU A 401 57 HETNAM WWU 1-[(2E)-4-{5-CARBAMOYL-2-[(4-ETHYL-2-METHYL-1,3- HETNAM 2 WWU OXAZOLE-5-CARBONYL)AMINO]-7-(3-HYDROXYPROPOXY)-1H- HETNAM 3 WWU BENZIMIDAZOL-1-YL}BUT-2-EN-1-YL]-2-[(4-ETHYL-2-METHYL- HETNAM 4 WWU 1,3-OXAZOLE-5-CARBONYL)AMINO]-7-METHOXY-1H- HETNAM 5 WWU BENZIMIDAZOLE-5-CARBOXAMIDE FORMUL 2 WWU C38 H42 N10 O9 FORMUL 3 HOH *115(H2 O) HELIX 1 AA1 ASN A 154 TYR A 167 1 14 HELIX 2 AA2 TYR A 167 LEU A 172 1 6 HELIX 3 AA3 GLU A 174 ASN A 183 1 10 HELIX 4 AA4 THR A 263 TYR A 274 1 12 HELIX 5 AA5 SER A 275 GLY A 278 5 4 HELIX 6 AA6 SER A 280 GLU A 282 5 3 HELIX 7 AA7 ASP A 283 ASP A 301 1 19 HELIX 8 AA8 SER A 324 GLU A 339 1 16 SHEET 1 AA1 5 ILE A 219 LYS A 224 0 SHEET 2 AA1 5 SER A 243 GLU A 249 -1 O ILE A 244 N ASP A 223 SHEET 3 AA1 5 GLN A 252 TYR A 261 -1 O ALA A 254 N LEU A 247 SHEET 4 AA1 5 LEU A 198 PRO A 203 1 N LEU A 201 O GLU A 260 SHEET 5 AA1 5 CYS A 309 TYR A 314 1 O ILE A 312 N LEU A 202 CRYST1 112.550 112.550 36.195 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008885 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008885 0.000000 0.00000 SCALE3 0.000000 0.000000 0.027628 0.00000 CONECT 1518 1519 1544 1546 CONECT 1519 1518 1520 CONECT 1520 1519 1522 1548 CONECT 1521 1548 CONECT 1522 1520 1543 1556 CONECT 1523 1524 1556 CONECT 1524 1523 1525 CONECT 1525 1524 1557 CONECT 1526 1528 1568 1571 CONECT 1527 1571 1572 CONECT 1528 1526 1529 CONECT 1529 1528 1530 1531 CONECT 1530 1529 1569 1570 CONECT 1531 1529 1532 CONECT 1532 1531 1567 1568 CONECT 1533 1560 1561 1562 CONECT 1534 1535 1562 1565 CONECT 1535 1534 1566 CONECT 1536 1564 CONECT 1537 1538 1552 1554 CONECT 1538 1537 1539 1555 CONECT 1539 1538 1540 CONECT 1540 1539 CONECT 1541 1542 1554 1555 CONECT 1542 1541 CONECT 1543 1522 1544 1549 CONECT 1544 1518 1543 CONECT 1545 1546 CONECT 1546 1518 1545 1547 CONECT 1547 1546 CONECT 1548 1520 1521 CONECT 1549 1543 1550 CONECT 1550 1549 1551 1556 CONECT 1551 1550 1552 CONECT 1552 1537 1551 1553 CONECT 1553 1552 CONECT 1554 1537 1541 CONECT 1555 1538 1541 CONECT 1556 1522 1523 1550 CONECT 1557 1525 1558 CONECT 1558 1557 1559 1568 CONECT 1559 1558 1560 1567 CONECT 1560 1533 1559 CONECT 1561 1533 CONECT 1562 1533 1534 1563 CONECT 1563 1562 1564 CONECT 1564 1536 1563 1565 CONECT 1565 1534 1564 CONECT 1566 1535 CONECT 1567 1532 1559 CONECT 1568 1526 1532 1558 CONECT 1569 1530 CONECT 1570 1530 CONECT 1571 1526 1527 CONECT 1572 1527 1573 CONECT 1573 1572 1574 CONECT 1574 1573 MASTER 382 0 1 8 5 0 0 6 1576 1 57 15 END