data_8SV4 # _entry.id 8SV4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8SV4 pdb_00008sv4 10.2210/pdb8sv4/pdb WWPDB D_1000274505 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8SV4 _pdbx_database_status.recvd_initial_deposition_date 2023-05-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Pallan, P.S.' 1 0000-0001-7449-7273 'Egli, M.' 2 0000-0003-4145-356X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biochemistry _citation.journal_id_ASTM BICHAW _citation.journal_id_CSD 0033 _citation.journal_id_ISSN 0006-2960 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 62 _citation.language ? _citation.page_first 2854 _citation.page_last 2867 _citation.title ;Conformational Morphing by a DNA Analogue Featuring 7-Deazapurines and 5-Halogenpyrimidines and the Origins of Adenine-Tract Geometry. ; _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.biochem.3c00327 _citation.pdbx_database_id_PubMed 37694722 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pallan, P.S.' 1 ? primary 'Lybrand, T.P.' 2 ? primary 'Rozners, E.' 3 0000-0001-7649-0040 primary 'Abramov, M.' 4 ? primary 'Schepers, G.' 5 ? primary 'Eremeeva, E.' 6 ? primary 'Herdewijn, P.' 7 0000-0003-3589-8503 primary 'Egli, M.' 8 0000-0003-4145-356X # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 8SV4 _cell.details ? _cell.formula_units_Z ? _cell.length_a 92.539 _cell.length_a_esd ? _cell.length_b 92.539 _cell.length_b_esd ? _cell.length_c 78.896 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8SV4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ribonuclease H' 16329.478 1 3.1.26.4 D132N ? ? 2 polymer syn ;DNA (5'-D(*(B86)P*(7DD)P*(B86)P*(7DD)P*(7DA)P*(7DA)P*(UCL)P*(UCL)P*(B86)P*(7DD)P*(B86)P*(7DD))-3') ; 3690.286 2 ? ? ? ? 3 non-polymer syn '2-[2-(2-ethoxyethoxy)ethoxy]ethanol' 178.226 1 ? ? ? ? 4 non-polymer syn 'ACETATE ION' 59.044 2 ? ? ? ? 5 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 6 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 7 water nat water 18.015 79 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RNase H' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSHMAKEEIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSNSQ TAIKWVKDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKADYGRK ; ;GSHMAKEEIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSNSQ TAIKWVKDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKADYGRK ; A ? 2 polydeoxyribonucleotide no yes '(B86)(7GU)(C37)(7GU)(7DA)(7DA)(UCL)(UCL)(C37)(7GU)(C37)(7GU)' XGCGAAUUCGCG B,C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 ALA n 1 6 LYS n 1 7 GLU n 1 8 GLU n 1 9 ILE n 1 10 ILE n 1 11 TRP n 1 12 GLU n 1 13 SER n 1 14 LEU n 1 15 SER n 1 16 VAL n 1 17 ASP n 1 18 VAL n 1 19 GLY n 1 20 SER n 1 21 GLN n 1 22 GLY n 1 23 ASN n 1 24 PRO n 1 25 GLY n 1 26 ILE n 1 27 VAL n 1 28 GLU n 1 29 TYR n 1 30 LYS n 1 31 GLY n 1 32 VAL n 1 33 ASP n 1 34 THR n 1 35 LYS n 1 36 THR n 1 37 GLY n 1 38 GLU n 1 39 VAL n 1 40 LEU n 1 41 PHE n 1 42 GLU n 1 43 ARG n 1 44 GLU n 1 45 PRO n 1 46 ILE n 1 47 PRO n 1 48 ILE n 1 49 GLY n 1 50 THR n 1 51 ASN n 1 52 ASN n 1 53 MET n 1 54 GLY n 1 55 GLU n 1 56 PHE n 1 57 LEU n 1 58 ALA n 1 59 ILE n 1 60 VAL n 1 61 HIS n 1 62 GLY n 1 63 LEU n 1 64 ARG n 1 65 TYR n 1 66 LEU n 1 67 LYS n 1 68 GLU n 1 69 ARG n 1 70 ASN n 1 71 SER n 1 72 ARG n 1 73 LYS n 1 74 PRO n 1 75 ILE n 1 76 TYR n 1 77 SER n 1 78 ASN n 1 79 SER n 1 80 GLN n 1 81 THR n 1 82 ALA n 1 83 ILE n 1 84 LYS n 1 85 TRP n 1 86 VAL n 1 87 LYS n 1 88 ASP n 1 89 LYS n 1 90 LYS n 1 91 ALA n 1 92 LYS n 1 93 SER n 1 94 THR n 1 95 LEU n 1 96 VAL n 1 97 ARG n 1 98 ASN n 1 99 GLU n 1 100 GLU n 1 101 THR n 1 102 ALA n 1 103 LEU n 1 104 ILE n 1 105 TRP n 1 106 LYS n 1 107 LEU n 1 108 VAL n 1 109 ASP n 1 110 GLU n 1 111 ALA n 1 112 GLU n 1 113 GLU n 1 114 TRP n 1 115 LEU n 1 116 ASN n 1 117 THR n 1 118 HIS n 1 119 THR n 1 120 TYR n 1 121 GLU n 1 122 THR n 1 123 PRO n 1 124 ILE n 1 125 LEU n 1 126 LYS n 1 127 TRP n 1 128 GLN n 1 129 THR n 1 130 ASP n 1 131 LYS n 1 132 TRP n 1 133 GLY n 1 134 GLU n 1 135 ILE n 1 136 LYS n 1 137 ALA n 1 138 ASP n 1 139 TYR n 1 140 GLY n 1 141 ARG n 1 142 LYS n 2 1 B86 n 2 2 7GU n 2 3 C37 n 2 4 7GU n 2 5 7DA n 2 6 7DA n 2 7 UCL n 2 8 UCL n 2 9 C37 n 2 10 7GU n 2 11 C37 n 2 12 7GU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 142 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene rnhA _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Halalkalibacterium halodurans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 86665 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 12 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP RNH1_BACHD Q9KEI9 ? 1 ;AKEEIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSDSQTAIK WVKDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKADYGRK ; 59 2 PDB 8SV4 8SV4 ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8SV4 A 5 ? 142 ? Q9KEI9 59 ? 196 ? 59 196 2 2 8SV4 B 1 ? 12 ? 8SV4 1 ? 12 ? 1 12 3 2 8SV4 C 1 ? 12 ? 8SV4 1 ? 12 ? 1 12 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8SV4 GLY A 1 ? UNP Q9KEI9 ? ? 'expression tag' 55 1 1 8SV4 SER A 2 ? UNP Q9KEI9 ? ? 'expression tag' 56 2 1 8SV4 HIS A 3 ? UNP Q9KEI9 ? ? 'expression tag' 57 3 1 8SV4 MET A 4 ? UNP Q9KEI9 ? ? 'expression tag' 58 4 1 8SV4 ASN A 78 ? UNP Q9KEI9 ASP 132 'engineered mutation' 132 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 7DA 'DNA linking' n "7-DEAZA-2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C11 H15 N4 O6 P' 330.234 7GU 'DNA linking' n "7-DEAZA-2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C11 H15 N4 O7 P' 346.233 ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 B86 non-polymer . "2'-deoxy-5-fluorocytidine" ? 'C9 H12 F N3 O4' 245.208 C37 'DNA linking' n "5-FLUORO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 F N3 O7 P' 325.188 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 FWN non-polymer . '2-[2-(2-ethoxyethoxy)ethoxy]ethanol' ? 'C8 H18 O4' 178.226 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UCL 'DNA linking' n ;5-CHLORO-2'-DEOXYURIDINE 5'-(DIHYDROGEN PHOSPHATE) ; ? 'C9 H12 Cl N2 O8 P' 342.627 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8SV4 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 4.09 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 69.89 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M Ammonium Sulfate, 0.1 M Sodium acetate trihydrate and 25% (w/v) PEG 4000' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 291 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-11-19 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'C(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97857 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 21-ID-G' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97857 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 21-ID-G _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8SV4 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.30 _reflns.d_resolution_low 27.60 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 17002 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 13.8 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 4.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.749 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.166 _reflns.pdbx_Rpim_I_all 0.044 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 2.30 2.38 ? ? ? ? ? ? 1573 ? ? ? ? ? ? ? ? ? ? ? 7.1 0.526 ? ? 1.557 0.485 ? 1 1 0.595 0.864 ? 90.8 ? 1.471 ? ? ? ? ? ? ? ? ? 2.38 2.48 ? ? ? ? ? ? 1661 ? ? ? ? ? ? ? ? ? ? ? 10.1 0.538 ? ? 1.392 0.404 ? 2 1 0.780 0.936 ? 98.3 ? 1.328 ? ? ? ? ? ? ? ? ? 2.48 2.59 ? ? ? ? ? ? 1700 ? ? ? ? ? ? ? ? ? ? ? 13.5 0.545 ? ? 1.326 0.355 ? 3 1 0.842 0.956 ? 99.9 ? 1.277 ? ? ? ? ? ? ? ? ? 2.59 2.73 ? ? ? ? ? ? 1721 ? ? ? ? ? ? ? ? ? ? ? 15.3 0.581 ? ? 0.970 0.248 ? 4 1 0.918 0.979 ? 100.0 ? 0.938 ? ? ? ? ? ? ? ? ? 2.73 2.90 ? ? ? ? ? ? 1706 ? ? ? ? ? ? ? ? ? ? ? 15.4 0.602 ? ? 0.701 0.179 ? 5 1 0.945 0.986 ? 100.0 ? 0.677 ? ? ? ? ? ? ? ? ? 2.90 3.12 ? ? ? ? ? ? 1703 ? ? ? ? ? ? ? ? ? ? ? 15.4 0.663 ? ? 0.335 0.085 ? 6 1 0.990 0.998 ? 100.0 ? 0.323 ? ? ? ? ? ? ? ? ? 3.12 3.43 ? ? ? ? ? ? 1736 ? ? ? ? ? ? ? ? ? ? ? 15.4 0.825 ? ? 0.161 0.041 ? 7 1 0.997 0.999 ? 100.0 ? 0.156 ? ? ? ? ? ? ? ? ? 3.43 3.93 ? ? ? ? ? ? 1700 ? ? ? ? ? ? ? ? ? ? ? 15.4 1.064 ? ? 0.115 0.029 ? 8 1 0.997 0.999 ? 100.0 ? 0.111 ? ? ? ? ? ? ? ? ? 3.93 4.95 ? ? ? ? ? ? 1738 ? ? ? ? ? ? ? ? ? ? ? 15.3 0.983 ? ? 0.074 0.019 ? 9 1 0.999 1.000 ? 100.0 ? 0.071 ? ? ? ? ? ? ? ? ? 4.95 27.60 ? ? ? ? ? ? 1764 ? ? ? ? ? ? ? ? ? ? ? 14.8 0.920 ? ? 0.053 0.014 ? 10 1 0.999 1.000 ? 100.0 ? 0.051 ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] 1.27 _refine.aniso_B[1][2] 0.63 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] 1.27 _refine.aniso_B[2][3] -0.00 _refine.aniso_B[3][3] -4.11 _refine.B_iso_max ? _refine.B_iso_mean 50.228 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.948 _refine.correlation_coeff_Fo_to_Fc_free 0.921 _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8SV4 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.30 _refine.ls_d_res_low 27.60 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 16084 _refine.ls_number_reflns_R_free 870 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.63 _refine.ls_percent_reflns_R_free 5.1 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.21599 _refine.ls_R_factor_R_free 0.25355 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.21390 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.214 _refine.pdbx_overall_ESU_R_Free 0.193 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 9.037 _refine.overall_SU_ML 0.194 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.details ? _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 27.60 _refine_hist.number_atoms_solvent 79 _refine_hist.number_atoms_total 1683 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1076 _refine_hist.pdbx_number_atoms_nucleic_acid 494 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.018 0.020 1685 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 1279 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.567 2.268 2379 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.829 3.000 3018 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 7.975 5.000 131 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 38.291 25.192 52 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 19.294 15.000 204 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 11.643 15.000 5 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.402 0.200 249 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.010 0.020 1465 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 272 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 3.320 4.453 529 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 3.300 4.445 526 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 4.851 6.661 657 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 4.849 6.662 658 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 5.159 5.382 1156 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 5.159 5.382 1156 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 7.616 7.932 1723 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 9.492 51.812 2089 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 9.494 51.810 2089 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.30 _refine_ls_shell.d_res_low 2.359 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 44 _refine_ls_shell.number_reflns_R_work 1050 _refine_ls_shell.percent_reflns_obs 86.89 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.416 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? _refine_ls_shell.R_factor_R_free 0.359 # _struct.entry_id 8SV4 _struct.title '7-Deazapurines and 5-Halogenpyrimidine DNA duplex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8SV4 _struct_keywords.text ;7-Deazapurines, 5-Halogenpyrimidines, Adenine-Tract Geometry, RNase-H complex, DNA duplex, Dickerson-Drew Dodecamer, DNA duplex crystal structure, DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA complex ; _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 5 ? I N N 6 ? J N N 7 ? K N N 7 ? L N N 7 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 50 ? ARG A 69 ? THR A 104 ARG A 123 1 ? 20 HELX_P HELX_P2 AA2 SER A 79 ? LYS A 89 ? SER A 133 LYS A 143 1 ? 11 HELX_P HELX_P3 AA3 ASN A 98 ? GLU A 100 ? ASN A 152 GLU A 154 5 ? 3 HELX_P HELX_P4 AA4 THR A 101 ? THR A 117 ? THR A 155 THR A 171 1 ? 17 HELX_P HELX_P5 AA5 GLN A 128 ? GLY A 133 ? GLN A 182 GLY A 187 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? B B86 1 O13 ? ? ? 1_555 B 7GU 2 P ? ? B B86 1 B 7GU 2 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale2 covale both ? B 7GU 2 "O3'" ? ? ? 1_555 B C37 3 P ? ? B 7GU 2 B C37 3 1_555 ? ? ? ? ? ? ? 1.622 ? ? covale3 covale one ? B C37 3 "O3'" ? ? ? 1_555 B 7GU 4 P ? ? B C37 3 B 7GU 4 1_555 ? ? ? ? ? ? ? 1.593 ? ? covale4 covale both ? B 7GU 4 "O3'" ? ? ? 1_555 B 7DA 5 P ? ? B 7GU 4 B 7DA 5 1_555 ? ? ? ? ? ? ? 1.631 ? ? covale5 covale both ? B 7DA 5 "O3'" ? ? ? 1_555 B 7DA 6 P ? ? B 7DA 5 B 7DA 6 1_555 ? ? ? ? ? ? ? 1.574 ? ? covale6 covale both ? B 7DA 6 "O3'" ? ? ? 1_555 B UCL 7 P ? ? B 7DA 6 B UCL 7 1_555 ? ? ? ? ? ? ? 1.598 ? ? covale7 covale one ? B UCL 7 "O3'" ? ? ? 1_555 B UCL 8 P ? ? B UCL 7 B UCL 8 1_555 ? ? ? ? ? ? ? 1.643 ? ? covale8 covale one ? B UCL 8 "O3'" ? ? ? 1_555 B C37 9 P ? ? B UCL 8 B C37 9 1_555 ? ? ? ? ? ? ? 1.618 ? ? covale9 covale one ? B C37 9 "O3'" ? ? ? 1_555 B 7GU 10 P ? ? B C37 9 B 7GU 10 1_555 ? ? ? ? ? ? ? 1.614 ? ? covale10 covale both ? B 7GU 10 "O3'" ? ? ? 1_555 B C37 11 P ? ? B 7GU 10 B C37 11 1_555 ? ? ? ? ? ? ? 1.612 ? ? covale11 covale one ? B C37 11 "O3'" ? ? ? 1_555 B 7GU 12 P ? ? B C37 11 B 7GU 12 1_555 ? ? ? ? ? ? ? 1.598 ? ? covale12 covale one ? C B86 1 O13 ? ? ? 1_555 C 7GU 2 P ? ? C B86 1 C 7GU 2 1_555 ? ? ? ? ? ? ? 1.613 ? ? covale13 covale both ? C 7GU 2 "O3'" ? ? ? 1_555 C C37 3 P ? ? C 7GU 2 C C37 3 1_555 ? ? ? ? ? ? ? 1.620 ? ? covale14 covale one ? C C37 3 "O3'" ? ? ? 1_555 C 7GU 4 P ? ? C C37 3 C 7GU 4 1_555 ? ? ? ? ? ? ? 1.598 ? ? covale15 covale both ? C 7GU 4 "O3'" ? ? ? 1_555 C 7DA 5 P ? ? C 7GU 4 C 7DA 5 1_555 ? ? ? ? ? ? ? 1.600 ? ? covale16 covale both ? C 7DA 5 "O3'" ? ? ? 1_555 C 7DA 6 P ? ? C 7DA 5 C 7DA 6 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale17 covale both ? C 7DA 6 "O3'" ? ? ? 1_555 C UCL 7 P ? ? C 7DA 6 C UCL 7 1_555 ? ? ? ? ? ? ? 1.587 ? ? covale18 covale one ? C UCL 7 "O3'" ? ? ? 1_555 C UCL 8 P ? ? C UCL 7 C UCL 8 1_555 ? ? ? ? ? ? ? 1.596 ? ? covale19 covale one ? C UCL 8 "O3'" ? ? ? 1_555 C C37 9 P ? ? C UCL 8 C C37 9 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale20 covale one ? C C37 9 "O3'" ? ? ? 1_555 C 7GU 10 P ? ? C C37 9 C 7GU 10 1_555 ? ? ? ? ? ? ? 1.589 ? ? covale21 covale both ? C 7GU 10 "O3'" ? ? ? 1_555 C C37 11 P ? ? C 7GU 10 C C37 11 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale22 covale one ? C C37 11 "O3'" ? ? ? 1_555 C 7GU 12 P ? ? C C37 11 C 7GU 12 1_555 ? ? ? ? ? ? ? 1.605 ? ? hydrog1 hydrog ? ? B 7GU 2 N1 ? ? ? 1_555 C C37 11 N3 ? ? B 7GU 2 C C37 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B 7GU 2 N2 ? ? ? 1_555 C C37 11 O2 ? ? B 7GU 2 C C37 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B 7GU 2 O6 ? ? ? 1_555 C C37 11 N4 ? ? B 7GU 2 C C37 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B C37 3 N3 ? ? ? 1_555 C 7GU 10 N1 ? ? B C37 3 C 7GU 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B C37 3 N4 ? ? ? 1_555 C 7GU 10 O6 ? ? B C37 3 C 7GU 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B C37 3 O2 ? ? ? 1_555 C 7GU 10 N2 ? ? B C37 3 C 7GU 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B 7GU 4 N1 ? ? ? 1_555 C C37 9 N3 ? ? B 7GU 4 C C37 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B 7GU 4 N2 ? ? ? 1_555 C C37 9 O2 ? ? B 7GU 4 C C37 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B 7GU 4 O6 ? ? ? 1_555 C C37 9 N4 ? ? B 7GU 4 C C37 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B 7DA 5 N1 ? ? ? 1_555 C UCL 8 N3 ? ? B 7DA 5 C UCL 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B 7DA 5 N6 ? ? ? 1_555 C UCL 8 O4 ? ? B 7DA 5 C UCL 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B 7DA 6 N1 ? ? ? 1_555 C UCL 7 N3 ? ? B 7DA 6 C UCL 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B 7DA 6 N6 ? ? ? 1_555 C UCL 7 O4 ? ? B 7DA 6 C UCL 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B UCL 7 N3 ? ? ? 1_555 C 7DA 6 N1 ? ? B UCL 7 C 7DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B UCL 7 O4 ? ? ? 1_555 C 7DA 6 N6 ? ? B UCL 7 C 7DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B UCL 8 N3 ? ? ? 1_555 C 7DA 5 N1 ? ? B UCL 8 C 7DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B UCL 8 O4 ? ? ? 1_555 C 7DA 5 N6 ? ? B UCL 8 C 7DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B C37 9 N3 ? ? ? 1_555 C 7GU 4 N1 ? ? B C37 9 C 7GU 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B C37 9 N4 ? ? ? 1_555 C 7GU 4 O6 ? ? B C37 9 C 7GU 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B C37 9 O2 ? ? ? 1_555 C 7GU 4 N2 ? ? B C37 9 C 7GU 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B 7GU 10 N1 ? ? ? 1_555 C C37 3 N3 ? ? B 7GU 10 C C37 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B 7GU 10 N2 ? ? ? 1_555 C C37 3 O2 ? ? B 7GU 10 C C37 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B 7GU 10 O6 ? ? ? 1_555 C C37 3 N4 ? ? B 7GU 10 C C37 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B C37 11 N3 ? ? ? 1_555 C 7GU 2 N1 ? ? B C37 11 C 7GU 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B C37 11 N4 ? ? ? 1_555 C 7GU 2 O6 ? ? B C37 11 C 7GU 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B C37 11 O2 ? ? ? 1_555 C 7GU 2 N2 ? ? B C37 11 C 7GU 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASN _struct_mon_prot_cis.label_seq_id 23 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASN _struct_mon_prot_cis.auth_seq_id 77 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 24 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 78 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 6.22 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? parallel AA2 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 39 ? GLU A 42 ? VAL A 93 GLU A 96 AA1 2 GLY A 25 ? ASP A 33 ? GLY A 79 ASP A 87 AA1 3 ILE A 46 ? GLY A 49 ? ILE A 100 GLY A 103 AA2 1 VAL A 39 ? GLU A 42 ? VAL A 93 GLU A 96 AA2 2 GLY A 25 ? ASP A 33 ? GLY A 79 ASP A 87 AA2 3 LEU A 14 ? GLN A 21 ? LEU A 68 GLN A 75 AA2 4 ILE A 75 ? SER A 77 ? ILE A 129 SER A 131 AA2 5 ILE A 124 ? LYS A 126 ? ILE A 178 LYS A 180 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O LEU A 40 ? O LEU A 94 N GLY A 31 ? N GLY A 85 AA1 2 3 N VAL A 27 ? N VAL A 81 O ILE A 46 ? O ILE A 100 AA2 1 2 O LEU A 40 ? O LEU A 94 N GLY A 31 ? N GLY A 85 AA2 2 3 O VAL A 32 ? O VAL A 86 N SER A 15 ? N SER A 69 AA2 3 4 N LEU A 14 ? N LEU A 68 O TYR A 76 ? O TYR A 130 AA2 4 5 N ILE A 75 ? N ILE A 129 O LEU A 125 ? O LEU A 179 # _atom_sites.entry_id 8SV4 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.010806 _atom_sites.fract_transf_matrix[1][2] 0.006239 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012478 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012675 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CL F N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 55 ? ? ? A . n A 1 2 SER 2 56 ? ? ? A . n A 1 3 HIS 3 57 ? ? ? A . n A 1 4 MET 4 58 ? ? ? A . n A 1 5 ALA 5 59 ? ? ? A . n A 1 6 LYS 6 60 ? ? ? A . n A 1 7 GLU 7 61 ? ? ? A . n A 1 8 GLU 8 62 62 GLU GLU A . n A 1 9 ILE 9 63 63 ILE ILE A . n A 1 10 ILE 10 64 64 ILE ILE A . n A 1 11 TRP 11 65 65 TRP TRP A . n A 1 12 GLU 12 66 66 GLU GLU A . n A 1 13 SER 13 67 67 SER SER A . n A 1 14 LEU 14 68 68 LEU LEU A . n A 1 15 SER 15 69 69 SER SER A . n A 1 16 VAL 16 70 70 VAL VAL A . n A 1 17 ASP 17 71 71 ASP ASP A . n A 1 18 VAL 18 72 72 VAL VAL A . n A 1 19 GLY 19 73 73 GLY GLY A . n A 1 20 SER 20 74 74 SER SER A . n A 1 21 GLN 21 75 75 GLN GLN A . n A 1 22 GLY 22 76 76 GLY GLY A . n A 1 23 ASN 23 77 77 ASN ASN A . n A 1 24 PRO 24 78 78 PRO PRO A . n A 1 25 GLY 25 79 79 GLY GLY A . n A 1 26 ILE 26 80 80 ILE ILE A . n A 1 27 VAL 27 81 81 VAL VAL A . n A 1 28 GLU 28 82 82 GLU GLU A . n A 1 29 TYR 29 83 83 TYR TYR A . n A 1 30 LYS 30 84 84 LYS LYS A . n A 1 31 GLY 31 85 85 GLY GLY A . n A 1 32 VAL 32 86 86 VAL VAL A . n A 1 33 ASP 33 87 87 ASP ASP A . n A 1 34 THR 34 88 88 THR THR A . n A 1 35 LYS 35 89 89 LYS LYS A . n A 1 36 THR 36 90 90 THR THR A . n A 1 37 GLY 37 91 91 GLY GLY A . n A 1 38 GLU 38 92 92 GLU GLU A . n A 1 39 VAL 39 93 93 VAL VAL A . n A 1 40 LEU 40 94 94 LEU LEU A . n A 1 41 PHE 41 95 95 PHE PHE A . n A 1 42 GLU 42 96 96 GLU GLU A . n A 1 43 ARG 43 97 97 ARG ARG A . n A 1 44 GLU 44 98 98 GLU GLU A . n A 1 45 PRO 45 99 99 PRO PRO A . n A 1 46 ILE 46 100 100 ILE ILE A . n A 1 47 PRO 47 101 101 PRO PRO A . n A 1 48 ILE 48 102 102 ILE ILE A . n A 1 49 GLY 49 103 103 GLY GLY A . n A 1 50 THR 50 104 104 THR THR A . n A 1 51 ASN 51 105 105 ASN ASN A . n A 1 52 ASN 52 106 106 ASN ASN A . n A 1 53 MET 53 107 107 MET MET A . n A 1 54 GLY 54 108 108 GLY GLY A . n A 1 55 GLU 55 109 109 GLU GLU A . n A 1 56 PHE 56 110 110 PHE PHE A . n A 1 57 LEU 57 111 111 LEU LEU A . n A 1 58 ALA 58 112 112 ALA ALA A . n A 1 59 ILE 59 113 113 ILE ILE A . n A 1 60 VAL 60 114 114 VAL VAL A . n A 1 61 HIS 61 115 115 HIS HIS A . n A 1 62 GLY 62 116 116 GLY GLY A . n A 1 63 LEU 63 117 117 LEU LEU A . n A 1 64 ARG 64 118 118 ARG ARG A . n A 1 65 TYR 65 119 119 TYR TYR A . n A 1 66 LEU 66 120 120 LEU LEU A . n A 1 67 LYS 67 121 121 LYS LYS A . n A 1 68 GLU 68 122 122 GLU GLU A . n A 1 69 ARG 69 123 123 ARG ARG A . n A 1 70 ASN 70 124 124 ASN ASN A . n A 1 71 SER 71 125 125 SER SER A . n A 1 72 ARG 72 126 126 ARG ARG A . n A 1 73 LYS 73 127 127 LYS LYS A . n A 1 74 PRO 74 128 128 PRO PRO A . n A 1 75 ILE 75 129 129 ILE ILE A . n A 1 76 TYR 76 130 130 TYR TYR A . n A 1 77 SER 77 131 131 SER SER A . n A 1 78 ASN 78 132 132 ASN ASN A . n A 1 79 SER 79 133 133 SER SER A . n A 1 80 GLN 80 134 134 GLN GLN A . n A 1 81 THR 81 135 135 THR THR A . n A 1 82 ALA 82 136 136 ALA ALA A . n A 1 83 ILE 83 137 137 ILE ILE A . n A 1 84 LYS 84 138 138 LYS LYS A . n A 1 85 TRP 85 139 139 TRP TRP A . n A 1 86 VAL 86 140 140 VAL VAL A . n A 1 87 LYS 87 141 141 LYS LYS A . n A 1 88 ASP 88 142 142 ASP ASP A . n A 1 89 LYS 89 143 143 LYS LYS A . n A 1 90 LYS 90 144 144 LYS LYS A . n A 1 91 ALA 91 145 145 ALA ALA A . n A 1 92 LYS 92 146 146 LYS LYS A . n A 1 93 SER 93 147 147 SER SER A . n A 1 94 THR 94 148 148 THR THR A . n A 1 95 LEU 95 149 149 LEU LEU A . n A 1 96 VAL 96 150 150 VAL VAL A . n A 1 97 ARG 97 151 151 ARG ARG A . n A 1 98 ASN 98 152 152 ASN ASN A . n A 1 99 GLU 99 153 153 GLU GLU A . n A 1 100 GLU 100 154 154 GLU GLU A . n A 1 101 THR 101 155 155 THR THR A . n A 1 102 ALA 102 156 156 ALA ALA A . n A 1 103 LEU 103 157 157 LEU LEU A . n A 1 104 ILE 104 158 158 ILE ILE A . n A 1 105 TRP 105 159 159 TRP TRP A . n A 1 106 LYS 106 160 160 LYS LYS A . n A 1 107 LEU 107 161 161 LEU LEU A . n A 1 108 VAL 108 162 162 VAL VAL A . n A 1 109 ASP 109 163 163 ASP ASP A . n A 1 110 GLU 110 164 164 GLU GLU A . n A 1 111 ALA 111 165 165 ALA ALA A . n A 1 112 GLU 112 166 166 GLU GLU A . n A 1 113 GLU 113 167 167 GLU GLU A . n A 1 114 TRP 114 168 168 TRP TRP A . n A 1 115 LEU 115 169 169 LEU LEU A . n A 1 116 ASN 116 170 170 ASN ASN A . n A 1 117 THR 117 171 171 THR THR A . n A 1 118 HIS 118 172 172 HIS HIS A . n A 1 119 THR 119 173 173 THR THR A . n A 1 120 TYR 120 174 174 TYR TYR A . n A 1 121 GLU 121 175 175 GLU GLU A . n A 1 122 THR 122 176 176 THR THR A . n A 1 123 PRO 123 177 177 PRO PRO A . n A 1 124 ILE 124 178 178 ILE ILE A . n A 1 125 LEU 125 179 179 LEU LEU A . n A 1 126 LYS 126 180 180 LYS LYS A . n A 1 127 TRP 127 181 181 TRP TRP A . n A 1 128 GLN 128 182 182 GLN GLN A . n A 1 129 THR 129 183 183 THR THR A . n A 1 130 ASP 130 184 184 ASP ASP A . n A 1 131 LYS 131 185 185 LYS LYS A . n A 1 132 TRP 132 186 186 TRP TRP A . n A 1 133 GLY 133 187 187 GLY GLY A . n A 1 134 GLU 134 188 188 GLU GLU A . n A 1 135 ILE 135 189 189 ILE ILE A . n A 1 136 LYS 136 190 190 LYS LYS A . n A 1 137 ALA 137 191 191 ALA ALA A . n A 1 138 ASP 138 192 192 ASP ASP A . n A 1 139 TYR 139 193 193 TYR TYR A . n A 1 140 GLY 140 194 ? ? ? A . n A 1 141 ARG 141 195 ? ? ? A . n A 1 142 LYS 142 196 ? ? ? A . n B 2 1 B86 1 1 1 B86 B86 B . n B 2 2 7GU 2 2 2 7GU 7DD B . n B 2 3 C37 3 3 3 C37 B86 B . n B 2 4 7GU 4 4 4 7GU 7DD B . n B 2 5 7DA 5 5 5 7DA 7DA B . n B 2 6 7DA 6 6 6 7DA 7DA B . n B 2 7 UCL 7 7 7 UCL UCL B . n B 2 8 UCL 8 8 8 UCL UCL B . n B 2 9 C37 9 9 9 C37 B86 B . n B 2 10 7GU 10 10 10 7GU 7DD B . n B 2 11 C37 11 11 11 C37 B86 B . n B 2 12 7GU 12 12 12 7GU 7DD B . n C 2 1 B86 1 1 1 B86 B86 C . n C 2 2 7GU 2 2 2 7GU 7DD C . n C 2 3 C37 3 3 3 C37 B86 C . n C 2 4 7GU 4 4 4 7GU 7DD C . n C 2 5 7DA 5 5 5 7DA 7DA C . n C 2 6 7DA 6 6 6 7DA 7DA C . n C 2 7 UCL 7 7 7 UCL UCL C . n C 2 8 UCL 8 8 8 UCL UCL C . n C 2 9 C37 9 9 9 C37 B86 C . n C 2 10 7GU 10 10 10 7GU 7DD C . n C 2 11 C37 11 11 11 C37 B86 C . n C 2 12 7GU 12 12 12 7GU 7DD C . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email martin.egli@vanderbilt.edu _pdbx_contact_author.name_first Martin _pdbx_contact_author.name_last Egli _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-4145-356X # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 FWN 1 201 87 FWN PE5 A . E 4 ACT 1 202 88 ACT ACT A . F 4 ACT 1 203 89 ACT ACT A . G 5 SO4 1 204 90 SO4 SO4 A . H 5 SO4 1 205 91 SO4 SO4 A . I 6 EDO 1 206 92 EDO EDO A . J 7 HOH 1 301 45 HOH HOH A . J 7 HOH 2 302 32 HOH HOH A . J 7 HOH 3 303 47 HOH HOH A . J 7 HOH 4 304 48 HOH HOH A . J 7 HOH 5 305 31 HOH HOH A . J 7 HOH 6 306 73 HOH HOH A . J 7 HOH 7 307 13 HOH HOH A . J 7 HOH 8 308 9 HOH HOH A . J 7 HOH 9 309 2 HOH HOH A . J 7 HOH 10 310 38 HOH HOH A . J 7 HOH 11 311 46 HOH HOH A . J 7 HOH 12 312 26 HOH HOH A . J 7 HOH 13 313 81 HOH HOH A . J 7 HOH 14 314 85 HOH HOH A . J 7 HOH 15 315 40 HOH HOH A . J 7 HOH 16 316 8 HOH HOH A . J 7 HOH 17 317 52 HOH HOH A . J 7 HOH 18 318 37 HOH HOH A . J 7 HOH 19 319 57 HOH HOH A . J 7 HOH 20 320 39 HOH HOH A . J 7 HOH 21 321 83 HOH HOH A . J 7 HOH 22 322 25 HOH HOH A . J 7 HOH 23 323 7 HOH HOH A . J 7 HOH 24 324 4 HOH HOH A . J 7 HOH 25 325 22 HOH HOH A . J 7 HOH 26 326 54 HOH HOH A . J 7 HOH 27 327 6 HOH HOH A . J 7 HOH 28 328 35 HOH HOH A . J 7 HOH 29 329 36 HOH HOH A . J 7 HOH 30 330 18 HOH HOH A . J 7 HOH 31 331 60 HOH HOH A . J 7 HOH 32 332 27 HOH HOH A . J 7 HOH 33 333 53 HOH HOH A . J 7 HOH 34 334 84 HOH HOH A . J 7 HOH 35 335 15 HOH HOH A . J 7 HOH 36 336 30 HOH HOH A . J 7 HOH 37 337 55 HOH HOH A . J 7 HOH 38 338 63 HOH HOH A . J 7 HOH 39 339 16 HOH HOH A . J 7 HOH 40 340 12 HOH HOH A . J 7 HOH 41 341 43 HOH HOH A . J 7 HOH 42 342 59 HOH HOH A . J 7 HOH 43 343 5 HOH HOH A . J 7 HOH 44 344 56 HOH HOH A . J 7 HOH 45 345 44 HOH HOH A . J 7 HOH 46 346 21 HOH HOH A . J 7 HOH 47 347 28 HOH HOH A . J 7 HOH 48 348 20 HOH HOH A . J 7 HOH 49 349 3 HOH HOH A . J 7 HOH 50 350 72 HOH HOH A . J 7 HOH 51 351 61 HOH HOH A . J 7 HOH 52 352 29 HOH HOH A . J 7 HOH 53 353 78 HOH HOH A . J 7 HOH 54 354 58 HOH HOH A . J 7 HOH 55 355 19 HOH HOH A . J 7 HOH 56 356 86 HOH HOH A . J 7 HOH 57 357 41 HOH HOH A . J 7 HOH 58 358 42 HOH HOH A . J 7 HOH 59 359 82 HOH HOH A . J 7 HOH 60 360 34 HOH HOH A . K 7 HOH 1 101 80 HOH HOH B . K 7 HOH 2 102 51 HOH HOH B . K 7 HOH 3 103 69 HOH HOH B . K 7 HOH 4 104 77 HOH HOH B . K 7 HOH 5 105 79 HOH HOH B . K 7 HOH 6 106 33 HOH HOH B . K 7 HOH 7 107 76 HOH HOH B . K 7 HOH 8 108 75 HOH HOH B . L 7 HOH 1 101 62 HOH HOH C . L 7 HOH 2 102 70 HOH HOH C . L 7 HOH 3 103 24 HOH HOH C . L 7 HOH 4 104 71 HOH HOH C . L 7 HOH 5 105 66 HOH HOH C . L 7 HOH 6 106 65 HOH HOH C . L 7 HOH 7 107 74 HOH HOH C . L 7 HOH 8 108 67 HOH HOH C . L 7 HOH 9 109 68 HOH HOH C . L 7 HOH 10 110 64 HOH HOH C . L 7 HOH 11 111 17 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-10-04 2 'Structure model' 1 1 2023-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0218 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 4 # _pdbx_entry_details.entry_id 8SV4 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 146 ? ? -111.77 60.18 2 1 GLU A 188 ? ? -26.66 122.41 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 359 ? 6.30 . 2 1 O ? A HOH 360 ? 7.26 . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 55 ? A GLY 1 2 1 Y 1 A SER 56 ? A SER 2 3 1 Y 1 A HIS 57 ? A HIS 3 4 1 Y 1 A MET 58 ? A MET 4 5 1 Y 1 A ALA 59 ? A ALA 5 6 1 Y 1 A LYS 60 ? A LYS 6 7 1 Y 1 A GLU 61 ? A GLU 7 8 1 Y 1 A GLY 194 ? A GLY 140 9 1 Y 1 A ARG 195 ? A ARG 141 10 1 Y 1 A LYS 196 ? A LYS 142 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 7DA P P N N 1 7DA OP1 O N N 2 7DA OP2 O N N 3 7DA "O5'" O N N 4 7DA N9 N Y N 5 7DA C4 C Y N 6 7DA N3 N Y N 7 7DA C2 C Y N 8 7DA N1 N Y N 9 7DA C6 C Y N 10 7DA N6 N N N 11 7DA C5 C Y N 12 7DA C7 C Y N 13 7DA C8 C Y N 14 7DA "C2'" C N N 15 7DA "C5'" C N N 16 7DA "C4'" C N R 17 7DA "O4'" O N N 18 7DA "C1'" C N R 19 7DA "C3'" C N S 20 7DA "O3'" O N N 21 7DA OP3 O N N 22 7DA HOP2 H N N 23 7DA H2 H N N 24 7DA HN61 H N N 25 7DA HN62 H N N 26 7DA H7 H N N 27 7DA H8 H N N 28 7DA "H2'" H N N 29 7DA "H2''" H N N 30 7DA "H5'" H N N 31 7DA "H5''" H N N 32 7DA "H4'" H N N 33 7DA "H1'" H N N 34 7DA H1 H N N 35 7DA "HO3'" H N N 36 7DA HOP3 H N N 37 7GU P P N N 38 7GU OP1 O N N 39 7GU OP2 O N N 40 7GU "O5'" O N N 41 7GU N9 N Y N 42 7GU C4 C Y N 43 7GU N3 N N N 44 7GU C2 C N N 45 7GU N2 N N N 46 7GU N1 N N N 47 7GU C6 C N N 48 7GU O6 O N N 49 7GU C5 C Y N 50 7GU C7 C Y N 51 7GU C8 C Y N 52 7GU "C2'" C N N 53 7GU "C5'" C N N 54 7GU "C4'" C N R 55 7GU "O4'" O N N 56 7GU "C1'" C N R 57 7GU "C3'" C N S 58 7GU "O3'" O N N 59 7GU OP3 O N N 60 7GU HOP2 H N N 61 7GU HN21 H N N 62 7GU HN22 H N N 63 7GU HN1 H N N 64 7GU H7 H N N 65 7GU H8 H N N 66 7GU "H2'" H N N 67 7GU "H2''" H N N 68 7GU "H5'" H N N 69 7GU "H5''" H N N 70 7GU "H4'" H N N 71 7GU "H1'" H N N 72 7GU "H3'" H N N 73 7GU "HO3'" H N N 74 7GU HOP3 H N N 75 ACT C C N N 76 ACT O O N N 77 ACT OXT O N N 78 ACT CH3 C N N 79 ACT H1 H N N 80 ACT H2 H N N 81 ACT H3 H N N 82 ALA N N N N 83 ALA CA C N S 84 ALA C C N N 85 ALA O O N N 86 ALA CB C N N 87 ALA OXT O N N 88 ALA H H N N 89 ALA H2 H N N 90 ALA HA H N N 91 ALA HB1 H N N 92 ALA HB2 H N N 93 ALA HB3 H N N 94 ALA HXT H N N 95 ARG N N N N 96 ARG CA C N S 97 ARG C C N N 98 ARG O O N N 99 ARG CB C N N 100 ARG CG C N N 101 ARG CD C N N 102 ARG NE N N N 103 ARG CZ C N N 104 ARG NH1 N N N 105 ARG NH2 N N N 106 ARG OXT O N N 107 ARG H H N N 108 ARG H2 H N N 109 ARG HA H N N 110 ARG HB2 H N N 111 ARG HB3 H N N 112 ARG HG2 H N N 113 ARG HG3 H N N 114 ARG HD2 H N N 115 ARG HD3 H N N 116 ARG HE H N N 117 ARG HH11 H N N 118 ARG HH12 H N N 119 ARG HH21 H N N 120 ARG HH22 H N N 121 ARG HXT H N N 122 ASN N N N N 123 ASN CA C N S 124 ASN C C N N 125 ASN O O N N 126 ASN CB C N N 127 ASN CG C N N 128 ASN OD1 O N N 129 ASN ND2 N N N 130 ASN OXT O N N 131 ASN H H N N 132 ASN H2 H N N 133 ASN HA H N N 134 ASN HB2 H N N 135 ASN HB3 H N N 136 ASN HD21 H N N 137 ASN HD22 H N N 138 ASN HXT H N N 139 ASP N N N N 140 ASP CA C N S 141 ASP C C N N 142 ASP O O N N 143 ASP CB C N N 144 ASP CG C N N 145 ASP OD1 O N N 146 ASP OD2 O N N 147 ASP OXT O N N 148 ASP H H N N 149 ASP H2 H N N 150 ASP HA H N N 151 ASP HB2 H N N 152 ASP HB3 H N N 153 ASP HD2 H N N 154 ASP HXT H N N 155 B86 C1 C N N 156 B86 N2 N N N 157 B86 C3 C N N 158 B86 N4 N N N 159 B86 C5 C N N 160 B86 C6 C N N 161 B86 N7 N N N 162 B86 F8 F N N 163 B86 O9 O N N 164 B86 C10 C N R 165 B86 O11 O N N 166 B86 C12 C N R 167 B86 C13 C N S 168 B86 O13 O N N 169 B86 C14 C N N 170 B86 C15 C N N 171 B86 O16 O N N 172 B86 H5 H N N 173 B86 HN7 H N N 174 B86 HN7A H N N 175 B86 H10 H N N 176 B86 H12 H N N 177 B86 H13 H N N 178 B86 HO13 H N N 179 B86 H14 H N N 180 B86 H14A H N N 181 B86 H15 H N N 182 B86 H15A H N N 183 B86 HO16 H N N 184 C37 O3P O N N 185 C37 P P N N 186 C37 O1P O N N 187 C37 O2P O N N 188 C37 "O5'" O N N 189 C37 "C5'" C N N 190 C37 "C4'" C N R 191 C37 "O4'" O N N 192 C37 "C3'" C N S 193 C37 "O3'" O N N 194 C37 "C2'" C N N 195 C37 "C1'" C N R 196 C37 N1 N N N 197 C37 C2 C N N 198 C37 O2 O N N 199 C37 N3 N N N 200 C37 C4 C N N 201 C37 N4 N N N 202 C37 C5 C N N 203 C37 C6 C N N 204 C37 F F N N 205 C37 H3P H N N 206 C37 H2P H N N 207 C37 "H5'1" H N N 208 C37 "H5'2" H N N 209 C37 "H4'" H N N 210 C37 "H3'" H N N 211 C37 HA H N N 212 C37 "H2'1" H N N 213 C37 "H2'2" H N N 214 C37 "H1'" H N N 215 C37 H4N1 H N N 216 C37 H4N2 H N N 217 C37 H6 H N N 218 EDO C1 C N N 219 EDO O1 O N N 220 EDO C2 C N N 221 EDO O2 O N N 222 EDO H11 H N N 223 EDO H12 H N N 224 EDO HO1 H N N 225 EDO H21 H N N 226 EDO H22 H N N 227 EDO HO2 H N N 228 FWN O4 O N N 229 FWN C5 C N N 230 FWN C6 C N N 231 FWN O7 O N N 232 FWN C8 C N N 233 FWN C9 C N N 234 FWN O10 O N N 235 FWN C11 C N N 236 FWN C12 C N N 237 FWN O13 O N N 238 FWN C14 C N N 239 FWN C1 C N N 240 FWN H1 H N N 241 FWN H2 H N N 242 FWN H3 H N N 243 FWN H4 H N N 244 FWN H5 H N N 245 FWN H6 H N N 246 FWN H7 H N N 247 FWN H8 H N N 248 FWN H9 H N N 249 FWN H10 H N N 250 FWN H11 H N N 251 FWN H12 H N N 252 FWN H13 H N N 253 FWN H14 H N N 254 FWN H15 H N N 255 FWN H16 H N N 256 FWN H17 H N N 257 FWN H18 H N N 258 GLN N N N N 259 GLN CA C N S 260 GLN C C N N 261 GLN O O N N 262 GLN CB C N N 263 GLN CG C N N 264 GLN CD C N N 265 GLN OE1 O N N 266 GLN NE2 N N N 267 GLN OXT O N N 268 GLN H H N N 269 GLN H2 H N N 270 GLN HA H N N 271 GLN HB2 H N N 272 GLN HB3 H N N 273 GLN HG2 H N N 274 GLN HG3 H N N 275 GLN HE21 H N N 276 GLN HE22 H N N 277 GLN HXT H N N 278 GLU N N N N 279 GLU CA C N S 280 GLU C C N N 281 GLU O O N N 282 GLU CB C N N 283 GLU CG C N N 284 GLU CD C N N 285 GLU OE1 O N N 286 GLU OE2 O N N 287 GLU OXT O N N 288 GLU H H N N 289 GLU H2 H N N 290 GLU HA H N N 291 GLU HB2 H N N 292 GLU HB3 H N N 293 GLU HG2 H N N 294 GLU HG3 H N N 295 GLU HE2 H N N 296 GLU HXT H N N 297 GLY N N N N 298 GLY CA C N N 299 GLY C C N N 300 GLY O O N N 301 GLY OXT O N N 302 GLY H H N N 303 GLY H2 H N N 304 GLY HA2 H N N 305 GLY HA3 H N N 306 GLY HXT H N N 307 HIS N N N N 308 HIS CA C N S 309 HIS C C N N 310 HIS O O N N 311 HIS CB C N N 312 HIS CG C Y N 313 HIS ND1 N Y N 314 HIS CD2 C Y N 315 HIS CE1 C Y N 316 HIS NE2 N Y N 317 HIS OXT O N N 318 HIS H H N N 319 HIS H2 H N N 320 HIS HA H N N 321 HIS HB2 H N N 322 HIS HB3 H N N 323 HIS HD1 H N N 324 HIS HD2 H N N 325 HIS HE1 H N N 326 HIS HE2 H N N 327 HIS HXT H N N 328 HOH O O N N 329 HOH H1 H N N 330 HOH H2 H N N 331 ILE N N N N 332 ILE CA C N S 333 ILE C C N N 334 ILE O O N N 335 ILE CB C N S 336 ILE CG1 C N N 337 ILE CG2 C N N 338 ILE CD1 C N N 339 ILE OXT O N N 340 ILE H H N N 341 ILE H2 H N N 342 ILE HA H N N 343 ILE HB H N N 344 ILE HG12 H N N 345 ILE HG13 H N N 346 ILE HG21 H N N 347 ILE HG22 H N N 348 ILE HG23 H N N 349 ILE HD11 H N N 350 ILE HD12 H N N 351 ILE HD13 H N N 352 ILE HXT H N N 353 LEU N N N N 354 LEU CA C N S 355 LEU C C N N 356 LEU O O N N 357 LEU CB C N N 358 LEU CG C N N 359 LEU CD1 C N N 360 LEU CD2 C N N 361 LEU OXT O N N 362 LEU H H N N 363 LEU H2 H N N 364 LEU HA H N N 365 LEU HB2 H N N 366 LEU HB3 H N N 367 LEU HG H N N 368 LEU HD11 H N N 369 LEU HD12 H N N 370 LEU HD13 H N N 371 LEU HD21 H N N 372 LEU HD22 H N N 373 LEU HD23 H N N 374 LEU HXT H N N 375 LYS N N N N 376 LYS CA C N S 377 LYS C C N N 378 LYS O O N N 379 LYS CB C N N 380 LYS CG C N N 381 LYS CD C N N 382 LYS CE C N N 383 LYS NZ N N N 384 LYS OXT O N N 385 LYS H H N N 386 LYS H2 H N N 387 LYS HA H N N 388 LYS HB2 H N N 389 LYS HB3 H N N 390 LYS HG2 H N N 391 LYS HG3 H N N 392 LYS HD2 H N N 393 LYS HD3 H N N 394 LYS HE2 H N N 395 LYS HE3 H N N 396 LYS HZ1 H N N 397 LYS HZ2 H N N 398 LYS HZ3 H N N 399 LYS HXT H N N 400 MET N N N N 401 MET CA C N S 402 MET C C N N 403 MET O O N N 404 MET CB C N N 405 MET CG C N N 406 MET SD S N N 407 MET CE C N N 408 MET OXT O N N 409 MET H H N N 410 MET H2 H N N 411 MET HA H N N 412 MET HB2 H N N 413 MET HB3 H N N 414 MET HG2 H N N 415 MET HG3 H N N 416 MET HE1 H N N 417 MET HE2 H N N 418 MET HE3 H N N 419 MET HXT H N N 420 PHE N N N N 421 PHE CA C N S 422 PHE C C N N 423 PHE O O N N 424 PHE CB C N N 425 PHE CG C Y N 426 PHE CD1 C Y N 427 PHE CD2 C Y N 428 PHE CE1 C Y N 429 PHE CE2 C Y N 430 PHE CZ C Y N 431 PHE OXT O N N 432 PHE H H N N 433 PHE H2 H N N 434 PHE HA H N N 435 PHE HB2 H N N 436 PHE HB3 H N N 437 PHE HD1 H N N 438 PHE HD2 H N N 439 PHE HE1 H N N 440 PHE HE2 H N N 441 PHE HZ H N N 442 PHE HXT H N N 443 PRO N N N N 444 PRO CA C N S 445 PRO C C N N 446 PRO O O N N 447 PRO CB C N N 448 PRO CG C N N 449 PRO CD C N N 450 PRO OXT O N N 451 PRO H H N N 452 PRO HA H N N 453 PRO HB2 H N N 454 PRO HB3 H N N 455 PRO HG2 H N N 456 PRO HG3 H N N 457 PRO HD2 H N N 458 PRO HD3 H N N 459 PRO HXT H N N 460 SER N N N N 461 SER CA C N S 462 SER C C N N 463 SER O O N N 464 SER CB C N N 465 SER OG O N N 466 SER OXT O N N 467 SER H H N N 468 SER H2 H N N 469 SER HA H N N 470 SER HB2 H N N 471 SER HB3 H N N 472 SER HG H N N 473 SER HXT H N N 474 SO4 S S N N 475 SO4 O1 O N N 476 SO4 O2 O N N 477 SO4 O3 O N N 478 SO4 O4 O N N 479 THR N N N N 480 THR CA C N S 481 THR C C N N 482 THR O O N N 483 THR CB C N R 484 THR OG1 O N N 485 THR CG2 C N N 486 THR OXT O N N 487 THR H H N N 488 THR H2 H N N 489 THR HA H N N 490 THR HB H N N 491 THR HG1 H N N 492 THR HG21 H N N 493 THR HG22 H N N 494 THR HG23 H N N 495 THR HXT H N N 496 TRP N N N N 497 TRP CA C N S 498 TRP C C N N 499 TRP O O N N 500 TRP CB C N N 501 TRP CG C Y N 502 TRP CD1 C Y N 503 TRP CD2 C Y N 504 TRP NE1 N Y N 505 TRP CE2 C Y N 506 TRP CE3 C Y N 507 TRP CZ2 C Y N 508 TRP CZ3 C Y N 509 TRP CH2 C Y N 510 TRP OXT O N N 511 TRP H H N N 512 TRP H2 H N N 513 TRP HA H N N 514 TRP HB2 H N N 515 TRP HB3 H N N 516 TRP HD1 H N N 517 TRP HE1 H N N 518 TRP HE3 H N N 519 TRP HZ2 H N N 520 TRP HZ3 H N N 521 TRP HH2 H N N 522 TRP HXT H N N 523 TYR N N N N 524 TYR CA C N S 525 TYR C C N N 526 TYR O O N N 527 TYR CB C N N 528 TYR CG C Y N 529 TYR CD1 C Y N 530 TYR CD2 C Y N 531 TYR CE1 C Y N 532 TYR CE2 C Y N 533 TYR CZ C Y N 534 TYR OH O N N 535 TYR OXT O N N 536 TYR H H N N 537 TYR H2 H N N 538 TYR HA H N N 539 TYR HB2 H N N 540 TYR HB3 H N N 541 TYR HD1 H N N 542 TYR HD2 H N N 543 TYR HE1 H N N 544 TYR HE2 H N N 545 TYR HH H N N 546 TYR HXT H N N 547 UCL O3P O N N 548 UCL P P N N 549 UCL O1P O N N 550 UCL O2P O N N 551 UCL "O5'" O N N 552 UCL "C5'" C N N 553 UCL "C4'" C N R 554 UCL "O4'" O N N 555 UCL "C3'" C N S 556 UCL "O3'" O N N 557 UCL "C2'" C N N 558 UCL "C1'" C N R 559 UCL N1 N N N 560 UCL C2 C N N 561 UCL O2 O N N 562 UCL N3 N N N 563 UCL C4 C N N 564 UCL O4 O N N 565 UCL C5 C N N 566 UCL C6 C N N 567 UCL CL CL N N 568 UCL HO1P H N N 569 UCL HO2P H N N 570 UCL "H5'1" H N N 571 UCL "H5'2" H N N 572 UCL "H4'" H N N 573 UCL "H3'" H N N 574 UCL "HO3'" H N N 575 UCL "H2'1" H N N 576 UCL "H2'2" H N N 577 UCL "H1'" H N N 578 UCL HN3 H N N 579 UCL H6 H N N 580 VAL N N N N 581 VAL CA C N S 582 VAL C C N N 583 VAL O O N N 584 VAL CB C N N 585 VAL CG1 C N N 586 VAL CG2 C N N 587 VAL OXT O N N 588 VAL H H N N 589 VAL H2 H N N 590 VAL HA H N N 591 VAL HB H N N 592 VAL HG11 H N N 593 VAL HG12 H N N 594 VAL HG13 H N N 595 VAL HG21 H N N 596 VAL HG22 H N N 597 VAL HG23 H N N 598 VAL HXT H N N 599 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7DA P OP1 doub N N 1 7DA P OP2 sing N N 2 7DA P "O5'" sing N N 3 7DA P OP3 sing N N 4 7DA OP2 HOP2 sing N N 5 7DA "O5'" "C5'" sing N N 6 7DA N9 C4 sing Y N 7 7DA N9 C8 sing Y N 8 7DA N9 "C1'" sing N N 9 7DA C4 N3 sing Y N 10 7DA C4 C5 doub Y N 11 7DA N3 C2 doub Y N 12 7DA C2 N1 sing Y N 13 7DA C2 H2 sing N N 14 7DA N1 C6 doub Y N 15 7DA C6 N6 sing N N 16 7DA C6 C5 sing Y N 17 7DA N6 HN61 sing N N 18 7DA N6 HN62 sing N N 19 7DA C5 C7 sing Y N 20 7DA C7 C8 doub Y N 21 7DA C7 H7 sing N N 22 7DA C8 H8 sing N N 23 7DA "C2'" "C1'" sing N N 24 7DA "C2'" "C3'" sing N N 25 7DA "C2'" "H2'" sing N N 26 7DA "C2'" "H2''" sing N N 27 7DA "C5'" "C4'" sing N N 28 7DA "C5'" "H5'" sing N N 29 7DA "C5'" "H5''" sing N N 30 7DA "C4'" "O4'" sing N N 31 7DA "C4'" "C3'" sing N N 32 7DA "C4'" "H4'" sing N N 33 7DA "O4'" "C1'" sing N N 34 7DA "C1'" "H1'" sing N N 35 7DA "C3'" "O3'" sing N N 36 7DA "C3'" H1 sing N N 37 7DA "O3'" "HO3'" sing N N 38 7DA OP3 HOP3 sing N N 39 7GU P OP1 doub N N 40 7GU P OP2 sing N N 41 7GU P "O5'" sing N N 42 7GU P OP3 sing N N 43 7GU OP2 HOP2 sing N N 44 7GU "O5'" "C5'" sing N N 45 7GU N9 C4 sing Y N 46 7GU N9 C8 sing Y N 47 7GU N9 "C1'" sing N N 48 7GU C4 N3 sing N N 49 7GU C4 C5 doub Y N 50 7GU N3 C2 doub N N 51 7GU C2 N2 sing N N 52 7GU C2 N1 sing N N 53 7GU N2 HN21 sing N N 54 7GU N2 HN22 sing N N 55 7GU N1 C6 sing N N 56 7GU N1 HN1 sing N N 57 7GU C6 O6 doub N N 58 7GU C6 C5 sing N N 59 7GU C5 C7 sing Y N 60 7GU C7 C8 doub Y N 61 7GU C7 H7 sing N N 62 7GU C8 H8 sing N N 63 7GU "C2'" "C1'" sing N N 64 7GU "C2'" "C3'" sing N N 65 7GU "C2'" "H2'" sing N N 66 7GU "C2'" "H2''" sing N N 67 7GU "C5'" "C4'" sing N N 68 7GU "C5'" "H5'" sing N N 69 7GU "C5'" "H5''" sing N N 70 7GU "C4'" "O4'" sing N N 71 7GU "C4'" "C3'" sing N N 72 7GU "C4'" "H4'" sing N N 73 7GU "O4'" "C1'" sing N N 74 7GU "C1'" "H1'" sing N N 75 7GU "C3'" "O3'" sing N N 76 7GU "C3'" "H3'" sing N N 77 7GU "O3'" "HO3'" sing N N 78 7GU OP3 HOP3 sing N N 79 ACT C O doub N N 80 ACT C OXT sing N N 81 ACT C CH3 sing N N 82 ACT CH3 H1 sing N N 83 ACT CH3 H2 sing N N 84 ACT CH3 H3 sing N N 85 ALA N CA sing N N 86 ALA N H sing N N 87 ALA N H2 sing N N 88 ALA CA C sing N N 89 ALA CA CB sing N N 90 ALA CA HA sing N N 91 ALA C O doub N N 92 ALA C OXT sing N N 93 ALA CB HB1 sing N N 94 ALA CB HB2 sing N N 95 ALA CB HB3 sing N N 96 ALA OXT HXT sing N N 97 ARG N CA sing N N 98 ARG N H sing N N 99 ARG N H2 sing N N 100 ARG CA C sing N N 101 ARG CA CB sing N N 102 ARG CA HA sing N N 103 ARG C O doub N N 104 ARG C OXT sing N N 105 ARG CB CG sing N N 106 ARG CB HB2 sing N N 107 ARG CB HB3 sing N N 108 ARG CG CD sing N N 109 ARG CG HG2 sing N N 110 ARG CG HG3 sing N N 111 ARG CD NE sing N N 112 ARG CD HD2 sing N N 113 ARG CD HD3 sing N N 114 ARG NE CZ sing N N 115 ARG NE HE sing N N 116 ARG CZ NH1 sing N N 117 ARG CZ NH2 doub N N 118 ARG NH1 HH11 sing N N 119 ARG NH1 HH12 sing N N 120 ARG NH2 HH21 sing N N 121 ARG NH2 HH22 sing N N 122 ARG OXT HXT sing N N 123 ASN N CA sing N N 124 ASN N H sing N N 125 ASN N H2 sing N N 126 ASN CA C sing N N 127 ASN CA CB sing N N 128 ASN CA HA sing N N 129 ASN C O doub N N 130 ASN C OXT sing N N 131 ASN CB CG sing N N 132 ASN CB HB2 sing N N 133 ASN CB HB3 sing N N 134 ASN CG OD1 doub N N 135 ASN CG ND2 sing N N 136 ASN ND2 HD21 sing N N 137 ASN ND2 HD22 sing N N 138 ASN OXT HXT sing N N 139 ASP N CA sing N N 140 ASP N H sing N N 141 ASP N H2 sing N N 142 ASP CA C sing N N 143 ASP CA CB sing N N 144 ASP CA HA sing N N 145 ASP C O doub N N 146 ASP C OXT sing N N 147 ASP CB CG sing N N 148 ASP CB HB2 sing N N 149 ASP CB HB3 sing N N 150 ASP CG OD1 doub N N 151 ASP CG OD2 sing N N 152 ASP OD2 HD2 sing N N 153 ASP OXT HXT sing N N 154 B86 C1 N2 doub N N 155 B86 C1 C6 sing N N 156 B86 C1 N7 sing N N 157 B86 N2 C3 sing N N 158 B86 C3 N4 sing N N 159 B86 C3 O9 doub N N 160 B86 N4 C5 sing N N 161 B86 N4 C10 sing N N 162 B86 C5 C6 doub N N 163 B86 C6 F8 sing N N 164 B86 C10 O11 sing N N 165 B86 C10 C14 sing N N 166 B86 O11 C12 sing N N 167 B86 C12 C13 sing N N 168 B86 C12 C15 sing N N 169 B86 C13 O13 sing N N 170 B86 C13 C14 sing N N 171 B86 C15 O16 sing N N 172 B86 C5 H5 sing N N 173 B86 N7 HN7 sing N N 174 B86 N7 HN7A sing N N 175 B86 C10 H10 sing N N 176 B86 C12 H12 sing N N 177 B86 C13 H13 sing N N 178 B86 O13 HO13 sing N N 179 B86 C14 H14 sing N N 180 B86 C14 H14A sing N N 181 B86 C15 H15 sing N N 182 B86 C15 H15A sing N N 183 B86 O16 HO16 sing N N 184 C37 O3P P sing N N 185 C37 O3P H3P sing N N 186 C37 P O1P doub N N 187 C37 P O2P sing N N 188 C37 P "O5'" sing N N 189 C37 O2P H2P sing N N 190 C37 "O5'" "C5'" sing N N 191 C37 "C5'" "C4'" sing N N 192 C37 "C5'" "H5'1" sing N N 193 C37 "C5'" "H5'2" sing N N 194 C37 "C4'" "O4'" sing N N 195 C37 "C4'" "C3'" sing N N 196 C37 "C4'" "H4'" sing N N 197 C37 "O4'" "C1'" sing N N 198 C37 "C3'" "O3'" sing N N 199 C37 "C3'" "C2'" sing N N 200 C37 "C3'" "H3'" sing N N 201 C37 "O3'" HA sing N N 202 C37 "C2'" "C1'" sing N N 203 C37 "C2'" "H2'1" sing N N 204 C37 "C2'" "H2'2" sing N N 205 C37 "C1'" N1 sing N N 206 C37 "C1'" "H1'" sing N N 207 C37 N1 C2 sing N N 208 C37 N1 C6 sing N N 209 C37 C2 O2 doub N N 210 C37 C2 N3 sing N N 211 C37 N3 C4 doub N N 212 C37 C4 N4 sing N N 213 C37 C4 C5 sing N N 214 C37 N4 H4N1 sing N N 215 C37 N4 H4N2 sing N N 216 C37 C5 C6 doub N N 217 C37 C5 F sing N N 218 C37 C6 H6 sing N N 219 EDO C1 O1 sing N N 220 EDO C1 C2 sing N N 221 EDO C1 H11 sing N N 222 EDO C1 H12 sing N N 223 EDO O1 HO1 sing N N 224 EDO C2 O2 sing N N 225 EDO C2 H21 sing N N 226 EDO C2 H22 sing N N 227 EDO O2 HO2 sing N N 228 FWN C9 O10 sing N N 229 FWN C9 C8 sing N N 230 FWN O10 C11 sing N N 231 FWN C11 C12 sing N N 232 FWN C8 O7 sing N N 233 FWN O7 C6 sing N N 234 FWN O13 C12 sing N N 235 FWN O13 C14 sing N N 236 FWN C6 C5 sing N N 237 FWN C1 C14 sing N N 238 FWN C5 O4 sing N N 239 FWN O4 H1 sing N N 240 FWN C5 H2 sing N N 241 FWN C5 H3 sing N N 242 FWN C6 H4 sing N N 243 FWN C6 H5 sing N N 244 FWN C8 H6 sing N N 245 FWN C8 H7 sing N N 246 FWN C9 H8 sing N N 247 FWN C9 H9 sing N N 248 FWN C11 H10 sing N N 249 FWN C11 H11 sing N N 250 FWN C12 H12 sing N N 251 FWN C12 H13 sing N N 252 FWN C14 H14 sing N N 253 FWN C14 H15 sing N N 254 FWN C1 H16 sing N N 255 FWN C1 H17 sing N N 256 FWN C1 H18 sing N N 257 GLN N CA sing N N 258 GLN N H sing N N 259 GLN N H2 sing N N 260 GLN CA C sing N N 261 GLN CA CB sing N N 262 GLN CA HA sing N N 263 GLN C O doub N N 264 GLN C OXT sing N N 265 GLN CB CG sing N N 266 GLN CB HB2 sing N N 267 GLN CB HB3 sing N N 268 GLN CG CD sing N N 269 GLN CG HG2 sing N N 270 GLN CG HG3 sing N N 271 GLN CD OE1 doub N N 272 GLN CD NE2 sing N N 273 GLN NE2 HE21 sing N N 274 GLN NE2 HE22 sing N N 275 GLN OXT HXT sing N N 276 GLU N CA sing N N 277 GLU N H sing N N 278 GLU N H2 sing N N 279 GLU CA C sing N N 280 GLU CA CB sing N N 281 GLU CA HA sing N N 282 GLU C O doub N N 283 GLU C OXT sing N N 284 GLU CB CG sing N N 285 GLU CB HB2 sing N N 286 GLU CB HB3 sing N N 287 GLU CG CD sing N N 288 GLU CG HG2 sing N N 289 GLU CG HG3 sing N N 290 GLU CD OE1 doub N N 291 GLU CD OE2 sing N N 292 GLU OE2 HE2 sing N N 293 GLU OXT HXT sing N N 294 GLY N CA sing N N 295 GLY N H sing N N 296 GLY N H2 sing N N 297 GLY CA C sing N N 298 GLY CA HA2 sing N N 299 GLY CA HA3 sing N N 300 GLY C O doub N N 301 GLY C OXT sing N N 302 GLY OXT HXT sing N N 303 HIS N CA sing N N 304 HIS N H sing N N 305 HIS N H2 sing N N 306 HIS CA C sing N N 307 HIS CA CB sing N N 308 HIS CA HA sing N N 309 HIS C O doub N N 310 HIS C OXT sing N N 311 HIS CB CG sing N N 312 HIS CB HB2 sing N N 313 HIS CB HB3 sing N N 314 HIS CG ND1 sing Y N 315 HIS CG CD2 doub Y N 316 HIS ND1 CE1 doub Y N 317 HIS ND1 HD1 sing N N 318 HIS CD2 NE2 sing Y N 319 HIS CD2 HD2 sing N N 320 HIS CE1 NE2 sing Y N 321 HIS CE1 HE1 sing N N 322 HIS NE2 HE2 sing N N 323 HIS OXT HXT sing N N 324 HOH O H1 sing N N 325 HOH O H2 sing N N 326 ILE N CA sing N N 327 ILE N H sing N N 328 ILE N H2 sing N N 329 ILE CA C sing N N 330 ILE CA CB sing N N 331 ILE CA HA sing N N 332 ILE C O doub N N 333 ILE C OXT sing N N 334 ILE CB CG1 sing N N 335 ILE CB CG2 sing N N 336 ILE CB HB sing N N 337 ILE CG1 CD1 sing N N 338 ILE CG1 HG12 sing N N 339 ILE CG1 HG13 sing N N 340 ILE CG2 HG21 sing N N 341 ILE CG2 HG22 sing N N 342 ILE CG2 HG23 sing N N 343 ILE CD1 HD11 sing N N 344 ILE CD1 HD12 sing N N 345 ILE CD1 HD13 sing N N 346 ILE OXT HXT sing N N 347 LEU N CA sing N N 348 LEU N H sing N N 349 LEU N H2 sing N N 350 LEU CA C sing N N 351 LEU CA CB sing N N 352 LEU CA HA sing N N 353 LEU C O doub N N 354 LEU C OXT sing N N 355 LEU CB CG sing N N 356 LEU CB HB2 sing N N 357 LEU CB HB3 sing N N 358 LEU CG CD1 sing N N 359 LEU CG CD2 sing N N 360 LEU CG HG sing N N 361 LEU CD1 HD11 sing N N 362 LEU CD1 HD12 sing N N 363 LEU CD1 HD13 sing N N 364 LEU CD2 HD21 sing N N 365 LEU CD2 HD22 sing N N 366 LEU CD2 HD23 sing N N 367 LEU OXT HXT sing N N 368 LYS N CA sing N N 369 LYS N H sing N N 370 LYS N H2 sing N N 371 LYS CA C sing N N 372 LYS CA CB sing N N 373 LYS CA HA sing N N 374 LYS C O doub N N 375 LYS C OXT sing N N 376 LYS CB CG sing N N 377 LYS CB HB2 sing N N 378 LYS CB HB3 sing N N 379 LYS CG CD sing N N 380 LYS CG HG2 sing N N 381 LYS CG HG3 sing N N 382 LYS CD CE sing N N 383 LYS CD HD2 sing N N 384 LYS CD HD3 sing N N 385 LYS CE NZ sing N N 386 LYS CE HE2 sing N N 387 LYS CE HE3 sing N N 388 LYS NZ HZ1 sing N N 389 LYS NZ HZ2 sing N N 390 LYS NZ HZ3 sing N N 391 LYS OXT HXT sing N N 392 MET N CA sing N N 393 MET N H sing N N 394 MET N H2 sing N N 395 MET CA C sing N N 396 MET CA CB sing N N 397 MET CA HA sing N N 398 MET C O doub N N 399 MET C OXT sing N N 400 MET CB CG sing N N 401 MET CB HB2 sing N N 402 MET CB HB3 sing N N 403 MET CG SD sing N N 404 MET CG HG2 sing N N 405 MET CG HG3 sing N N 406 MET SD CE sing N N 407 MET CE HE1 sing N N 408 MET CE HE2 sing N N 409 MET CE HE3 sing N N 410 MET OXT HXT sing N N 411 PHE N CA sing N N 412 PHE N H sing N N 413 PHE N H2 sing N N 414 PHE CA C sing N N 415 PHE CA CB sing N N 416 PHE CA HA sing N N 417 PHE C O doub N N 418 PHE C OXT sing N N 419 PHE CB CG sing N N 420 PHE CB HB2 sing N N 421 PHE CB HB3 sing N N 422 PHE CG CD1 doub Y N 423 PHE CG CD2 sing Y N 424 PHE CD1 CE1 sing Y N 425 PHE CD1 HD1 sing N N 426 PHE CD2 CE2 doub Y N 427 PHE CD2 HD2 sing N N 428 PHE CE1 CZ doub Y N 429 PHE CE1 HE1 sing N N 430 PHE CE2 CZ sing Y N 431 PHE CE2 HE2 sing N N 432 PHE CZ HZ sing N N 433 PHE OXT HXT sing N N 434 PRO N CA sing N N 435 PRO N CD sing N N 436 PRO N H sing N N 437 PRO CA C sing N N 438 PRO CA CB sing N N 439 PRO CA HA sing N N 440 PRO C O doub N N 441 PRO C OXT sing N N 442 PRO CB CG sing N N 443 PRO CB HB2 sing N N 444 PRO CB HB3 sing N N 445 PRO CG CD sing N N 446 PRO CG HG2 sing N N 447 PRO CG HG3 sing N N 448 PRO CD HD2 sing N N 449 PRO CD HD3 sing N N 450 PRO OXT HXT sing N N 451 SER N CA sing N N 452 SER N H sing N N 453 SER N H2 sing N N 454 SER CA C sing N N 455 SER CA CB sing N N 456 SER CA HA sing N N 457 SER C O doub N N 458 SER C OXT sing N N 459 SER CB OG sing N N 460 SER CB HB2 sing N N 461 SER CB HB3 sing N N 462 SER OG HG sing N N 463 SER OXT HXT sing N N 464 SO4 S O1 doub N N 465 SO4 S O2 doub N N 466 SO4 S O3 sing N N 467 SO4 S O4 sing N N 468 THR N CA sing N N 469 THR N H sing N N 470 THR N H2 sing N N 471 THR CA C sing N N 472 THR CA CB sing N N 473 THR CA HA sing N N 474 THR C O doub N N 475 THR C OXT sing N N 476 THR CB OG1 sing N N 477 THR CB CG2 sing N N 478 THR CB HB sing N N 479 THR OG1 HG1 sing N N 480 THR CG2 HG21 sing N N 481 THR CG2 HG22 sing N N 482 THR CG2 HG23 sing N N 483 THR OXT HXT sing N N 484 TRP N CA sing N N 485 TRP N H sing N N 486 TRP N H2 sing N N 487 TRP CA C sing N N 488 TRP CA CB sing N N 489 TRP CA HA sing N N 490 TRP C O doub N N 491 TRP C OXT sing N N 492 TRP CB CG sing N N 493 TRP CB HB2 sing N N 494 TRP CB HB3 sing N N 495 TRP CG CD1 doub Y N 496 TRP CG CD2 sing Y N 497 TRP CD1 NE1 sing Y N 498 TRP CD1 HD1 sing N N 499 TRP CD2 CE2 doub Y N 500 TRP CD2 CE3 sing Y N 501 TRP NE1 CE2 sing Y N 502 TRP NE1 HE1 sing N N 503 TRP CE2 CZ2 sing Y N 504 TRP CE3 CZ3 doub Y N 505 TRP CE3 HE3 sing N N 506 TRP CZ2 CH2 doub Y N 507 TRP CZ2 HZ2 sing N N 508 TRP CZ3 CH2 sing Y N 509 TRP CZ3 HZ3 sing N N 510 TRP CH2 HH2 sing N N 511 TRP OXT HXT sing N N 512 TYR N CA sing N N 513 TYR N H sing N N 514 TYR N H2 sing N N 515 TYR CA C sing N N 516 TYR CA CB sing N N 517 TYR CA HA sing N N 518 TYR C O doub N N 519 TYR C OXT sing N N 520 TYR CB CG sing N N 521 TYR CB HB2 sing N N 522 TYR CB HB3 sing N N 523 TYR CG CD1 doub Y N 524 TYR CG CD2 sing Y N 525 TYR CD1 CE1 sing Y N 526 TYR CD1 HD1 sing N N 527 TYR CD2 CE2 doub Y N 528 TYR CD2 HD2 sing N N 529 TYR CE1 CZ doub Y N 530 TYR CE1 HE1 sing N N 531 TYR CE2 CZ sing Y N 532 TYR CE2 HE2 sing N N 533 TYR CZ OH sing N N 534 TYR OH HH sing N N 535 TYR OXT HXT sing N N 536 UCL O3P P doub N N 537 UCL P O1P sing N N 538 UCL P O2P sing N N 539 UCL P "O5'" sing N N 540 UCL O1P HO1P sing N N 541 UCL O2P HO2P sing N N 542 UCL "O5'" "C5'" sing N N 543 UCL "C5'" "C4'" sing N N 544 UCL "C5'" "H5'1" sing N N 545 UCL "C5'" "H5'2" sing N N 546 UCL "C4'" "O4'" sing N N 547 UCL "C4'" "C3'" sing N N 548 UCL "C4'" "H4'" sing N N 549 UCL "O4'" "C1'" sing N N 550 UCL "C3'" "O3'" sing N N 551 UCL "C3'" "C2'" sing N N 552 UCL "C3'" "H3'" sing N N 553 UCL "O3'" "HO3'" sing N N 554 UCL "C2'" "C1'" sing N N 555 UCL "C2'" "H2'1" sing N N 556 UCL "C2'" "H2'2" sing N N 557 UCL "C1'" N1 sing N N 558 UCL "C1'" "H1'" sing N N 559 UCL N1 C2 sing N N 560 UCL N1 C6 sing N N 561 UCL C2 O2 doub N N 562 UCL C2 N3 sing N N 563 UCL N3 C4 sing N N 564 UCL N3 HN3 sing N N 565 UCL C4 O4 doub N N 566 UCL C4 C5 sing N N 567 UCL C5 C6 doub N N 568 UCL C5 CL sing N N 569 UCL C6 H6 sing N N 570 VAL N CA sing N N 571 VAL N H sing N N 572 VAL N H2 sing N N 573 VAL CA C sing N N 574 VAL CA CB sing N N 575 VAL CA HA sing N N 576 VAL C O doub N N 577 VAL C OXT sing N N 578 VAL CB CG1 sing N N 579 VAL CB CG2 sing N N 580 VAL CB HB sing N N 581 VAL CG1 HG11 sing N N 582 VAL CG1 HG12 sing N N 583 VAL CG1 HG13 sing N N 584 VAL CG2 HG21 sing N N 585 VAL CG2 HG22 sing N N 586 VAL CG2 HG23 sing N N 587 VAL OXT HXT sing N N 588 # _ndb_struct_conf_na.entry_id 8SV4 _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B 7GU 2 1_555 C C37 11 1_555 -0.130 -0.226 -0.222 -3.957 -0.109 -4.621 1 B_7GU2:C3711_C B 2 ? C 11 ? 19 1 1 B C37 3 1_555 C 7GU 10 1_555 -0.213 -0.213 0.026 0.082 -6.838 0.592 2 B_C373:7GU10_C B 3 ? C 10 ? 19 1 1 B 7GU 4 1_555 C C37 9 1_555 -0.299 -0.087 0.003 6.670 -6.882 1.998 3 B_7GU4:C379_C B 4 ? C 9 ? 19 1 1 B 7DA 5 1_555 C UCL 8 1_555 0.013 -0.169 0.090 5.319 -9.478 3.899 4 B_7DA5:UCL8_C B 5 ? C 8 ? 20 1 1 B 7DA 6 1_555 C UCL 7 1_555 0.102 -0.109 0.109 2.045 -11.585 3.589 5 B_7DA6:UCL7_C B 6 ? C 7 ? 20 1 1 B UCL 7 1_555 C 7DA 6 1_555 0.092 -0.361 -0.036 1.896 -13.657 2.069 6 B_UCL7:7DA6_C B 7 ? C 6 ? 20 1 1 B UCL 8 1_555 C 7DA 5 1_555 0.056 -0.334 0.229 -4.379 -15.287 -2.211 7 B_UCL8:7DA5_C B 8 ? C 5 ? 20 1 1 B C37 9 1_555 C 7GU 4 1_555 0.141 -0.240 0.183 -8.505 -11.801 1.504 8 B_C379:7GU4_C B 9 ? C 4 ? 19 1 1 B 7GU 10 1_555 C C37 3 1_555 0.295 0.018 0.166 -0.903 -2.036 3.597 9 B_7GU10:C373_C B 10 ? C 3 ? 19 1 1 B C37 11 1_555 C 7GU 2 1_555 0.903 -0.167 0.050 0.822 -3.935 1.862 10 B_C3711:7GU2_C B 11 ? C 2 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B 7GU 2 1_555 C C37 11 1_555 B C37 3 1_555 C 7GU 10 1_555 -0.511 -0.609 3.242 -2.268 5.760 27.651 -2.549 0.531 3.086 11.864 4.672 28.322 1 BB_7GU2C373:7GU10C3711_CC B 2 ? C 11 ? B 3 ? C 10 ? 1 B C37 3 1_555 C 7GU 10 1_555 B 7GU 4 1_555 C C37 9 1_555 0.640 0.380 3.364 2.188 16.623 23.607 -3.228 -0.757 3.022 35.464 -4.668 28.886 2 BB_C3737GU4:C3797GU10_CC B 3 ? C 10 ? B 4 ? C 9 ? 1 B 7GU 4 1_555 C C37 9 1_555 B 7DA 5 1_555 C UCL 8 1_555 -0.228 -0.422 3.262 -0.395 1.637 39.250 -0.822 0.293 3.245 2.436 0.588 39.284 3 BB_7GU47DA5:UCL8C379_CC B 4 ? C 9 ? B 5 ? C 8 ? 1 B 7DA 5 1_555 C UCL 8 1_555 B 7DA 6 1_555 C UCL 7 1_555 -0.094 -0.342 3.281 -0.274 -0.746 39.136 -0.420 0.108 3.287 -1.114 0.408 39.144 4 BB_7DA57DA6:UCL7UCL8_CC B 5 ? C 8 ? B 6 ? C 7 ? 1 B 7DA 6 1_555 C UCL 7 1_555 B UCL 7 1_555 C 7DA 6 1_555 -0.091 -0.356 3.205 1.223 -2.716 36.034 -0.198 0.317 3.218 -4.382 -1.973 36.153 5 BB_7DA6UCL7:7DA6UCL7_CC B 6 ? C 7 ? B 7 ? C 6 ? 1 B UCL 7 1_555 C 7DA 6 1_555 B UCL 8 1_555 C 7DA 5 1_555 -0.199 -0.426 3.328 -1.777 0.972 37.132 -0.800 0.072 3.322 1.524 2.788 37.186 6 BB_UCL7UCL8:7DA57DA6_CC B 7 ? C 6 ? B 8 ? C 5 ? 1 B UCL 8 1_555 C 7DA 5 1_555 B C37 9 1_555 C 7GU 4 1_555 0.439 -0.091 3.290 1.415 -1.630 37.823 0.070 -0.493 3.304 -2.512 -2.180 37.882 7 BB_UCL8C379:7GU47DA5_CC B 8 ? C 5 ? B 9 ? C 4 ? 1 B C37 9 1_555 C 7GU 4 1_555 B 7GU 10 1_555 C C37 3 1_555 -0.016 0.410 3.110 -1.082 2.881 33.661 0.260 -0.140 3.132 4.963 1.863 33.797 8 BB_C3797GU10:C3737GU4_CC B 9 ? C 4 ? B 10 ? C 3 ? 1 B 7GU 10 1_555 C C37 3 1_555 B C37 11 1_555 C 7GU 2 1_555 -0.231 -0.037 3.369 -0.595 -2.859 41.048 0.266 0.262 3.367 -4.071 0.847 41.147 9 BB_7GU10C3711:7GU2C373_CC B 10 ? C 3 ? B 11 ? C 2 ? # _pdbx_audit_support.funding_organization 'Volkswagen Foundation' _pdbx_audit_support.country Germany _pdbx_audit_support.grant_number '92 851' _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 7DA ? ? 7DA ? ? 'SUBJECT OF INVESTIGATION' ? 2 7GU ? ? 7GU ? ? 'SUBJECT OF INVESTIGATION' ? 3 B86 ? ? B86 ? ? 'SUBJECT OF INVESTIGATION' ? 4 FWN ? ? FWN ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 '2-[2-(2-ethoxyethoxy)ethoxy]ethanol' FWN 4 'ACETATE ION' ACT 5 'SULFATE ION' SO4 6 1,2-ETHANEDIOL EDO 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3EY1 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #