HEADER TRANSCRIPTION 15-MAY-23 8SV6 TITLE STRUCTURE OF THE M. SMEGMATIS DARR PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: FATTY ACID METABOLISM REGULATOR PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: TETR FAMILY TRANSCRIPTIONAL REGULATOR; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOLICIBACTERIUM SMEGMATIS (MYCOBACTERIUM SOURCE 3 SMEGMATIS); SOURCE 4 ORGANISM_TAXID: 1772; SOURCE 5 GENE: FADR_3, FADR_5, BIN_B_02255, NCTC7017_03624; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DARR, TFR, M. SMEGMATIS, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR M.A.SCHUMACHER REVDAT 3 28-FEB-24 8SV6 1 SOURCE REVDAT 2 22-NOV-23 8SV6 1 JRNL REVDAT 1 01-NOV-23 8SV6 0 JRNL AUTH M.A.SCHUMACHER,N.LENT,V.B.CHEN,R.SALINAS JRNL TITL STRUCTURES OF THE DARR TRANSCRIPTION REGULATOR REVEAL UNIQUE JRNL TITL 2 MODES OF SECOND MESSENGER AND DNA BINDING. JRNL REF NAT COMMUN V. 14 7239 2023 JRNL REFN ESSN 2041-1723 JRNL PMID 37945601 JRNL DOI 10.1038/S41467-023-42823-0 REMARK 2 REMARK 2 RESOLUTION. 3.56 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.20.1_4487: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.56 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.21 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 12292 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.278 REMARK 3 R VALUE (WORKING SET) : 0.275 REMARK 3 FREE R VALUE : 0.305 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1230 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 10.0000 - 7.4000 0.99 1336 149 0.1947 0.2347 REMARK 3 2 7.4000 - 5.8700 1.00 1254 139 0.3381 0.3855 REMARK 3 3 5.8700 - 5.1300 1.00 1241 138 0.3480 0.3683 REMARK 3 4 5.1300 - 4.6600 1.00 1226 136 0.2871 0.2871 REMARK 3 5 4.6600 - 4.3300 1.00 1202 134 0.2987 0.3532 REMARK 3 6 4.3300 - 4.0800 1.00 1207 134 0.3167 0.3133 REMARK 3 7 4.0700 - 3.8700 1.00 1205 134 0.3317 0.3285 REMARK 3 8 3.8700 - 3.7000 1.00 1196 133 0.3594 0.3931 REMARK 3 9 3.7000 - 3.5600 1.00 1195 133 0.4094 0.4481 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.630 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.860 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 NULL REMARK 3 ANGLE : 0.618 NULL REMARK 3 CHIRALITY : 0.037 962 REMARK 3 PLANARITY : 0.003 1049 REMARK 3 DIHEDRAL : 5.900 852 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -16.4655 16.9488 -2.1782 REMARK 3 T TENSOR REMARK 3 T11: 0.9485 T22: 1.0083 REMARK 3 T33: 1.3117 T12: -0.1352 REMARK 3 T13: -0.1326 T23: 0.2932 REMARK 3 L TENSOR REMARK 3 L11: 1.2969 L22: 0.5375 REMARK 3 L33: 3.1838 L12: 0.9217 REMARK 3 L13: -2.2599 L23: -1.5739 REMARK 3 S TENSOR REMARK 3 S11: 0.0080 S12: -0.5198 S13: -0.3206 REMARK 3 S21: 0.0148 S22: -0.3525 S23: -0.3178 REMARK 3 S31: 0.2555 S32: 0.7027 S33: 0.3394 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8SV6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAY-23. REMARK 100 THE DEPOSITION ID IS D_1000274530. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-FEB-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12397 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.560 REMARK 200 RESOLUTION RANGE LOW (A) : 48.860 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 8.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.14100 REMARK 200 FOR THE DATA SET : 7.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.56 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.60 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 1.62400 REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG 3350 AND 0.1 M CITRATE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 107.52750 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 47.21100 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 47.21100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 53.76375 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 47.21100 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 47.21100 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 161.29125 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 47.21100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 47.21100 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 53.76375 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 47.21100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 47.21100 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 161.29125 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 107.52750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ALA A 3 REMARK 465 GLU A 4 REMARK 465 LEU A 5 REMARK 465 VAL A 110 REMARK 465 ARG A 111 REMARK 465 TYR A 112 REMARK 465 GLN A 113 REMARK 465 ALA A 114 REMARK 465 PRO A 205 REMARK 465 GLN A 206 REMARK 465 GLY A 207 REMARK 465 ARG A 208 REMARK 465 PRO A 209 REMARK 465 ARG A 210 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ALA B 3 REMARK 465 GLU B 4 REMARK 465 PRO B 205 REMARK 465 GLN B 206 REMARK 465 GLY B 207 REMARK 465 ARG B 208 REMARK 465 PRO B 209 REMARK 465 ARG B 210 REMARK 465 GLY C -2 REMARK 465 SER C -1 REMARK 465 HIS C 0 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 ALA C 3 REMARK 465 GLU C 4 REMARK 465 LEU C 5 REMARK 465 GLY C 76 REMARK 465 GLY C 77 REMARK 465 ALA C 78 REMARK 465 GLY C 109 REMARK 465 VAL C 110 REMARK 465 ARG C 111 REMARK 465 PRO C 205 REMARK 465 GLN C 206 REMARK 465 GLY C 207 REMARK 465 ARG C 208 REMARK 465 PRO C 209 REMARK 465 ARG C 210 REMARK 465 GLY D -2 REMARK 465 SER D -1 REMARK 465 HIS D 0 REMARK 465 MET D 1 REMARK 465 SER D 2 REMARK 465 ALA D 3 REMARK 465 GLU D 4 REMARK 465 LEU D 198 REMARK 465 ILE D 199 REMARK 465 THR D 200 REMARK 465 PRO D 205 REMARK 465 GLN D 206 REMARK 465 GLY D 207 REMARK 465 ARG D 208 REMARK 465 PRO D 209 REMARK 465 ARG D 210 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 6 CG CD OE1 OE2 REMARK 470 ILE A 7 CG1 CG2 CD1 REMARK 470 LYS A 52 CG CD CE NZ REMARK 470 LYS A 119 CG CD CE NZ REMARK 470 GLN A 122 CG CD OE1 NE2 REMARK 470 ARG A 123 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 134 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 142 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 177 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 179 CG1 CG2 CD1 REMARK 470 GLU A 180 CG CD OE1 OE2 REMARK 470 GLU A 186 CG CD OE1 OE2 REMARK 470 ASN A 204 CG OD1 ND2 REMARK 470 LEU B 5 CG CD1 CD2 REMARK 470 GLN B 37 CG CD OE1 NE2 REMARK 470 GLU B 69 CG CD OE1 OE2 REMARK 470 GLU B 94 CG CD OE1 OE2 REMARK 470 ARG B 111 CG CD NE CZ NH1 NH2 REMARK 470 TYR B 112 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 119 CG CD CE NZ REMARK 470 ARG B 123 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 134 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 142 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 150 CG OD1 OD2 REMARK 470 ILE B 179 CG1 CG2 CD1 REMARK 470 THR B 192 OG1 CG2 REMARK 470 ASN B 193 CG OD1 ND2 REMARK 470 ASP B 196 CG OD1 OD2 REMARK 470 GLU C 6 CG CD OE1 OE2 REMARK 470 ARG C 12 CG CD NE CZ NH1 NH2 REMARK 470 HIS C 24 CG ND1 CD2 CE1 NE2 REMARK 470 THR C 29 OG1 CG2 REMARK 470 ARG C 50 CG CD NE CZ NH1 NH2 REMARK 470 MET C 64 CG SD CE REMARK 470 THR C 80 OG1 CG2 REMARK 470 ARG C 82 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 94 CG CD OE1 OE2 REMARK 470 ASN C 95 CG OD1 ND2 REMARK 470 GLN C 108 CG CD OE1 NE2 REMARK 470 GLN C 122 CG CD OE1 NE2 REMARK 470 ARG C 123 CG CD NE CZ NH1 NH2 REMARK 470 LEU C 129 CG CD1 CD2 REMARK 470 ARG C 133 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 134 CG CD NE CZ NH1 NH2 REMARK 470 MET C 139 CG SD CE REMARK 470 SER C 152 OG REMARK 470 LEU C 169 CG CD1 CD2 REMARK 470 MET C 174 CG SD CE REMARK 470 ARG C 178 CG CD NE CZ NH1 NH2 REMARK 470 ILE C 179 CG1 CG2 CD1 REMARK 470 GLU C 180 CG CD OE1 OE2 REMARK 470 GLN C 182 CG CD OE1 NE2 REMARK 470 ASP C 185 CG OD1 OD2 REMARK 470 GLU C 189 CG CD OE1 OE2 REMARK 470 ASN C 193 CG OD1 ND2 REMARK 470 MET C 202 CG SD CE REMARK 470 ASN C 204 CG OD1 ND2 REMARK 470 LEU D 5 CG CD1 CD2 REMARK 470 GLU D 36 CG CD OE1 OE2 REMARK 470 ARG D 66 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 68 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 84 CG CD NE CZ NH1 NH2 REMARK 470 VAL D 106 CG1 CG2 REMARK 470 ARG D 111 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 119 CG CD CE NZ REMARK 470 GLN D 122 CG CD OE1 NE2 REMARK 470 ARG D 123 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 134 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 137 CG CD OE1 OE2 REMARK 470 ARG D 141 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 142 CG CD NE CZ NH1 NH2 REMARK 470 ASP D 150 CG OD1 OD2 REMARK 470 VAL D 156 CG1 CG2 REMARK 470 MET D 174 CG SD CE REMARK 470 ARG D 178 CG CD NE CZ NH1 NH2 REMARK 470 ILE D 179 CG1 CG2 CD1 REMARK 470 GLU D 180 CG CD OE1 OE2 REMARK 470 GLN D 182 CG CD OE1 NE2 REMARK 470 LEU D 184 CG CD1 CD2 REMARK 470 ASP D 185 CG OD1 OD2 REMARK 470 ASN D 188 CG OD1 ND2 REMARK 470 MET D 202 CG SD CE REMARK 470 ASN D 204 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O MET B 64 N ARG B 68 2.08 REMARK 500 O ALA B 161 N LEU B 165 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 78 53.55 -93.33 REMARK 500 ARG A 154 153.58 -49.22 REMARK 500 MET A 202 -175.53 -173.42 REMARK 500 ALA A 203 9.22 80.33 REMARK 500 ALA B 75 0.75 -66.26 REMARK 500 VAL B 143 -8.77 -59.40 REMARK 500 SER B 152 -7.61 -59.89 REMARK 500 ILE B 199 -64.77 -105.91 REMARK 500 LYS C 52 0.05 -68.20 REMARK 500 ARG C 84 -7.83 -57.42 REMARK 500 GLU C 99 38.20 -94.10 REMARK 500 GLN C 113 -9.05 62.83 REMARK 500 THR C 116 160.46 177.69 REMARK 500 GLU C 180 48.54 -84.80 REMARK 500 MET C 202 -167.18 -128.64 REMARK 500 ALA C 203 32.23 74.05 REMARK 500 LEU D 169 -60.57 -92.66 REMARK 500 TRP D 175 14.54 -141.87 REMARK 500 REMARK 500 REMARK: NULL DBREF1 8SV6 A 6 210 UNP A0A653FFT2_MYCSM DBREF2 8SV6 A A0A653FFT2 14 218 DBREF1 8SV6 B 6 210 UNP A0A653FFT2_MYCSM DBREF2 8SV6 B A0A653FFT2 14 218 DBREF1 8SV6 C 6 210 UNP A0A653FFT2_MYCSM DBREF2 8SV6 C A0A653FFT2 14 218 DBREF1 8SV6 D 6 210 UNP A0A653FFT2_MYCSM DBREF2 8SV6 D A0A653FFT2 14 218 SEQADV 8SV6 GLY A -2 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 SER A -1 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 HIS A 0 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 MET A 1 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 SER A 2 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 ALA A 3 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 GLU A 4 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 LEU A 5 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 GLY B -2 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 SER B -1 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 HIS B 0 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 MET B 1 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 SER B 2 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 ALA B 3 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 GLU B 4 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 LEU B 5 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 GLY C -2 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 SER C -1 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 HIS C 0 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 MET C 1 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 SER C 2 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 ALA C 3 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 GLU C 4 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 LEU C 5 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 GLY D -2 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 SER D -1 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 HIS D 0 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 MET D 1 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 SER D 2 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 ALA D 3 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 GLU D 4 UNP A0A653FFT EXPRESSION TAG SEQADV 8SV6 LEU D 5 UNP A0A653FFT EXPRESSION TAG SEQRES 1 A 213 GLY SER HIS MET SER ALA GLU LEU GLU ILE ASP VAL LYS SEQRES 2 A 213 THR ARG ILE LEU ASP ALA ALA ALA ASP ALA PHE MET VAL SEQRES 3 A 213 HIS GLY PHE ALA ASN THR THR ILE ASP ASP ILE ALA GLU SEQRES 4 A 213 GLN VAL GLY ALA THR LYS GLY LEU ILE TYR TYR HIS PHE SEQRES 5 A 213 ARG SER LYS PHE ASP ILE PHE LEU ALA VAL TYR GLU ASP SEQRES 6 A 213 GLY MET ARG ARG VAL ARG GLU ARG VAL GLU PRO HIS ALA SEQRES 7 A 213 GLY GLY ALA GLY THR GLY ARG GLU ARG LEU VAL ALA MET SEQRES 8 A 213 SER VAL ALA HIS LEU GLU ASN LEU MET THR GLU LEU GLY SEQRES 9 A 213 TYR HIS HIS VAL VAL HIS GLN GLY VAL ARG TYR GLN ALA SEQRES 10 A 213 SER THR ALA LEU LYS ILE ARG GLN ARG ASP ALA LEU ALA SEQRES 11 A 213 ALA LEU ASN GLU LEU ARG ARG ASP TYR GLU LEU MET PHE SEQRES 12 A 213 ARG ARG VAL VAL ALA GLU GLY ILE ALA ASP GLY SER LEU SEQRES 13 A 213 ARG VAL VAL ASP GLU ALA LEU ALA THR ARG THR LEU LEU SEQRES 14 A 213 SER ASN LEU ASN ALA VAL ASP MET TRP TYR ARG ARG ILE SEQRES 15 A 213 GLU GLY GLN THR LEU ASP GLU ILE ASN GLU LEU ALA THR SEQRES 16 A 213 ASN VAL VAL ASP LEU LEU ILE THR GLY MET ALA ASN PRO SEQRES 17 A 213 GLN GLY ARG PRO ARG SEQRES 1 B 213 GLY SER HIS MET SER ALA GLU LEU GLU ILE ASP VAL LYS SEQRES 2 B 213 THR ARG ILE LEU ASP ALA ALA ALA ASP ALA PHE MET VAL SEQRES 3 B 213 HIS GLY PHE ALA ASN THR THR ILE ASP ASP ILE ALA GLU SEQRES 4 B 213 GLN VAL GLY ALA THR LYS GLY LEU ILE TYR TYR HIS PHE SEQRES 5 B 213 ARG SER LYS PHE ASP ILE PHE LEU ALA VAL TYR GLU ASP SEQRES 6 B 213 GLY MET ARG ARG VAL ARG GLU ARG VAL GLU PRO HIS ALA SEQRES 7 B 213 GLY GLY ALA GLY THR GLY ARG GLU ARG LEU VAL ALA MET SEQRES 8 B 213 SER VAL ALA HIS LEU GLU ASN LEU MET THR GLU LEU GLY SEQRES 9 B 213 TYR HIS HIS VAL VAL HIS GLN GLY VAL ARG TYR GLN ALA SEQRES 10 B 213 SER THR ALA LEU LYS ILE ARG GLN ARG ASP ALA LEU ALA SEQRES 11 B 213 ALA LEU ASN GLU LEU ARG ARG ASP TYR GLU LEU MET PHE SEQRES 12 B 213 ARG ARG VAL VAL ALA GLU GLY ILE ALA ASP GLY SER LEU SEQRES 13 B 213 ARG VAL VAL ASP GLU ALA LEU ALA THR ARG THR LEU LEU SEQRES 14 B 213 SER ASN LEU ASN ALA VAL ASP MET TRP TYR ARG ARG ILE SEQRES 15 B 213 GLU GLY GLN THR LEU ASP GLU ILE ASN GLU LEU ALA THR SEQRES 16 B 213 ASN VAL VAL ASP LEU LEU ILE THR GLY MET ALA ASN PRO SEQRES 17 B 213 GLN GLY ARG PRO ARG SEQRES 1 C 213 GLY SER HIS MET SER ALA GLU LEU GLU ILE ASP VAL LYS SEQRES 2 C 213 THR ARG ILE LEU ASP ALA ALA ALA ASP ALA PHE MET VAL SEQRES 3 C 213 HIS GLY PHE ALA ASN THR THR ILE ASP ASP ILE ALA GLU SEQRES 4 C 213 GLN VAL GLY ALA THR LYS GLY LEU ILE TYR TYR HIS PHE SEQRES 5 C 213 ARG SER LYS PHE ASP ILE PHE LEU ALA VAL TYR GLU ASP SEQRES 6 C 213 GLY MET ARG ARG VAL ARG GLU ARG VAL GLU PRO HIS ALA SEQRES 7 C 213 GLY GLY ALA GLY THR GLY ARG GLU ARG LEU VAL ALA MET SEQRES 8 C 213 SER VAL ALA HIS LEU GLU ASN LEU MET THR GLU LEU GLY SEQRES 9 C 213 TYR HIS HIS VAL VAL HIS GLN GLY VAL ARG TYR GLN ALA SEQRES 10 C 213 SER THR ALA LEU LYS ILE ARG GLN ARG ASP ALA LEU ALA SEQRES 11 C 213 ALA LEU ASN GLU LEU ARG ARG ASP TYR GLU LEU MET PHE SEQRES 12 C 213 ARG ARG VAL VAL ALA GLU GLY ILE ALA ASP GLY SER LEU SEQRES 13 C 213 ARG VAL VAL ASP GLU ALA LEU ALA THR ARG THR LEU LEU SEQRES 14 C 213 SER ASN LEU ASN ALA VAL ASP MET TRP TYR ARG ARG ILE SEQRES 15 C 213 GLU GLY GLN THR LEU ASP GLU ILE ASN GLU LEU ALA THR SEQRES 16 C 213 ASN VAL VAL ASP LEU LEU ILE THR GLY MET ALA ASN PRO SEQRES 17 C 213 GLN GLY ARG PRO ARG SEQRES 1 D 213 GLY SER HIS MET SER ALA GLU LEU GLU ILE ASP VAL LYS SEQRES 2 D 213 THR ARG ILE LEU ASP ALA ALA ALA ASP ALA PHE MET VAL SEQRES 3 D 213 HIS GLY PHE ALA ASN THR THR ILE ASP ASP ILE ALA GLU SEQRES 4 D 213 GLN VAL GLY ALA THR LYS GLY LEU ILE TYR TYR HIS PHE SEQRES 5 D 213 ARG SER LYS PHE ASP ILE PHE LEU ALA VAL TYR GLU ASP SEQRES 6 D 213 GLY MET ARG ARG VAL ARG GLU ARG VAL GLU PRO HIS ALA SEQRES 7 D 213 GLY GLY ALA GLY THR GLY ARG GLU ARG LEU VAL ALA MET SEQRES 8 D 213 SER VAL ALA HIS LEU GLU ASN LEU MET THR GLU LEU GLY SEQRES 9 D 213 TYR HIS HIS VAL VAL HIS GLN GLY VAL ARG TYR GLN ALA SEQRES 10 D 213 SER THR ALA LEU LYS ILE ARG GLN ARG ASP ALA LEU ALA SEQRES 11 D 213 ALA LEU ASN GLU LEU ARG ARG ASP TYR GLU LEU MET PHE SEQRES 12 D 213 ARG ARG VAL VAL ALA GLU GLY ILE ALA ASP GLY SER LEU SEQRES 13 D 213 ARG VAL VAL ASP GLU ALA LEU ALA THR ARG THR LEU LEU SEQRES 14 D 213 SER ASN LEU ASN ALA VAL ASP MET TRP TYR ARG ARG ILE SEQRES 15 D 213 GLU GLY GLN THR LEU ASP GLU ILE ASN GLU LEU ALA THR SEQRES 16 D 213 ASN VAL VAL ASP LEU LEU ILE THR GLY MET ALA ASN PRO SEQRES 17 D 213 GLN GLY ARG PRO ARG HELIX 1 AA1 ASP A 8 HIS A 24 1 17 HELIX 2 AA2 THR A 30 GLY A 39 1 10 HELIX 3 AA3 GLY A 43 PHE A 49 1 7 HELIX 4 AA4 SER A 51 GLU A 72 1 22 HELIX 5 AA5 PRO A 73 ALA A 75 5 3 HELIX 6 AA6 THR A 80 GLU A 99 1 20 HELIX 7 AA7 GLU A 99 VAL A 106 1 8 HELIX 8 AA8 LYS A 119 ASP A 150 1 32 HELIX 9 AA9 ASP A 157 ALA A 171 1 15 HELIX 10 AB1 VAL A 172 MET A 174 5 3 HELIX 11 AB2 THR A 183 THR A 200 1 18 HELIX 12 AB3 GLU B 6 HIS B 24 1 19 HELIX 13 AB4 THR B 30 GLY B 39 1 10 HELIX 14 AB5 THR B 41 PHE B 49 1 9 HELIX 15 AB6 PHE B 53 GLU B 72 1 20 HELIX 16 AB7 PRO B 73 GLY B 76 5 4 HELIX 17 AB8 THR B 80 GLU B 99 1 20 HELIX 18 AB9 GLU B 99 GLN B 108 1 10 HELIX 19 AC1 GLY B 109 GLN B 113 5 5 HELIX 20 AC2 LYS B 119 GLY B 151 1 33 HELIX 21 AC3 ASP B 157 ALA B 171 1 15 HELIX 22 AC4 VAL B 172 TRP B 175 5 4 HELIX 23 AC5 THR B 183 THR B 200 1 18 HELIX 24 AC6 VAL C 9 GLY C 25 1 17 HELIX 25 AC7 THR C 30 GLY C 39 1 10 HELIX 26 AC8 THR C 41 PHE C 49 1 9 HELIX 27 AC9 SER C 51 VAL C 67 1 17 HELIX 28 AD1 VAL C 67 GLU C 72 1 6 HELIX 29 AD2 ARG C 82 ALA C 87 1 6 HELIX 30 AD3 ALA C 87 THR C 98 1 12 HELIX 31 AD4 GLU C 99 VAL C 105 1 7 HELIX 32 AD5 LYS C 119 ARG C 142 1 24 HELIX 33 AD6 VAL C 144 GLY C 151 1 8 HELIX 34 AD7 ASP C 157 ALA C 171 1 15 HELIX 35 AD8 VAL C 172 TRP C 175 5 4 HELIX 36 AD9 THR C 183 VAL C 194 1 12 HELIX 37 AE1 GLU D 6 GLY D 25 1 20 HELIX 38 AE2 THR D 30 GLY D 39 1 10 HELIX 39 AE3 THR D 41 PHE D 49 1 9 HELIX 40 AE4 SER D 51 GLU D 69 1 19 HELIX 41 AE5 VAL D 71 GLY D 76 1 6 HELIX 42 AE6 THR D 80 VAL D 90 1 11 HELIX 43 AE7 GLU D 94 GLU D 99 1 6 HELIX 44 AE8 LEU D 100 HIS D 104 5 5 HELIX 45 AE9 HIS D 107 ARG D 111 5 5 HELIX 46 AF1 TYR D 112 THR D 116 5 5 HELIX 47 AF2 LYS D 119 ALA D 125 1 7 HELIX 48 AF3 ALA D 125 GLU D 146 1 22 HELIX 49 AF4 ALA D 159 ALA D 171 1 13 HELIX 50 AF5 VAL D 172 TRP D 175 5 4 HELIX 51 AF6 ILE D 187 ASP D 196 1 10 CRYST1 94.422 94.422 215.055 90.00 90.00 90.00 P 41 21 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010591 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010591 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004650 0.00000