HEADER BIOSYNTHETIC PROTEIN 17-MAY-23 8SW5 TITLE PROTEIN PHOSPHATASE 1 IN COMPLEX WITH PP1-SPECIFIC PHOSPHATASE TITLE 2 TARGETING PEPTIDE (PHOSTAP) VERSION 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN PHOSPHATASE PP1-ALPHA CATALYTIC COMPND 3 SUBUNIT; COMPND 4 CHAIN: A, B; COMPND 5 FRAGMENT: UNP RESIDUES 7-300; COMPND 6 SYNONYM: PP-1A; COMPND 7 EC: 3.1.3.16; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: PP1-SPECIFIC PHOSPHATASE-TARGETING PEPTIDE VERSION 1; COMPND 11 CHAIN: C, D; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PPP1CA, PPP1A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 12 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS PHOSPHATASE-TARGETING PEPTIDE, COMPLEX, PHOSPHATASE REGULATOR, KEYWDS 2 BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.S.CHOY,W.PETI,R.PAGE REVDAT 2 06-NOV-24 8SW5 1 JRNL REVDAT 1 29-MAY-24 8SW5 0 JRNL AUTH M.S.CHOY,H.T.NGUYEN,G.S.KUMAR,W.PETI,A.N.KETTENBACH,R.PAGE JRNL TITL A PROTEIN PHOSPHATASE 1 SPECIFIC PHOS PHATASE TA RGETING P JRNL TITL 2 EPTIDE (PHOSTAP) TO IDENTIFY THE PP1 PHOSPHATOME. JRNL REF PROC.NATL.ACAD.SCI.USA V. 121 83121 2024 JRNL REFN ESSN 1091-6490 JRNL PMID 39446389 JRNL DOI 10.1073/PNAS.2415383121 REMARK 2 REMARK 2 RESOLUTION. 2.39 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.19.1_4122: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.39 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.36 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 34883 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.730 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.3600 - 5.7600 1.00 2601 158 0.1804 0.2278 REMARK 3 2 5.7600 - 4.5700 1.00 2464 150 0.1752 0.2083 REMARK 3 3 4.5700 - 4.0000 1.00 2409 146 0.1607 0.1955 REMARK 3 4 4.0000 - 3.6300 0.98 2340 142 0.2158 0.2949 REMARK 3 5 3.6300 - 3.3700 1.00 2379 144 0.2192 0.2723 REMARK 3 6 3.3700 - 3.1700 1.00 2378 145 0.2482 0.2746 REMARK 3 7 3.1700 - 3.0100 1.00 2358 144 0.2548 0.3108 REMARK 3 8 3.0100 - 2.8800 1.00 2345 142 0.2662 0.2954 REMARK 3 9 2.8800 - 2.7700 1.00 2363 144 0.2741 0.2712 REMARK 3 10 2.7700 - 2.6800 1.00 2340 143 0.2621 0.3108 REMARK 3 11 2.6800 - 2.5900 1.00 2345 141 0.2734 0.3320 REMARK 3 12 2.5900 - 2.5200 1.00 2329 143 0.2661 0.2660 REMARK 3 13 2.5200 - 2.4500 1.00 2332 142 0.2969 0.3413 REMARK 3 14 2.4500 - 2.3900 0.81 1901 115 0.3347 0.3293 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.180 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5257 REMARK 3 ANGLE : 0.675 7117 REMARK 3 CHIRALITY : 0.043 766 REMARK 3 PLANARITY : 0.004 921 REMARK 3 DIHEDRAL : 13.099 1948 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8SW5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-MAY-23. REMARK 100 THE DEPOSITION ID IS D_1000274231. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35238 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.390 REMARK 200 RESOLUTION RANGE LOW (A) : 38.360 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 16.80 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.39 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.48 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 11.10 REMARK 200 R MERGE FOR SHELL (I) : 1.86900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1 M AMMONIUM DIHYDROGEN PHOSPHATE, 100 REMARK 280 MM TRI-SODIUM CITRATE, PH 5.6, VAPOR DIFFUSION, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 100.05350 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 46.43800 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 46.43800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 50.02675 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 46.43800 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 46.43800 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 150.08025 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 46.43800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 46.43800 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 50.02675 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 46.43800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 46.43800 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 150.08025 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 100.05350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 2 REMARK 465 HIS A 3 REMARK 465 MET A 4 REMARK 465 GLY A 5 REMARK 465 GLY B 2 REMARK 465 HIS B 3 REMARK 465 MET B 4 REMARK 465 GLY B 5 REMARK 465 ALA B 299 REMARK 465 ASP B 300 REMARK 465 GLY C 379 REMARK 465 HIS C 380 REMARK 465 MET C 381 REMARK 465 ARG C 387A REMARK 465 ALA C 387B REMARK 465 ARG C 387C REMARK 465 ARG C 387D REMARK 465 GLU C 387E REMARK 465 ARG C 387F REMARK 465 PRO C 387G REMARK 465 GLY C 387H REMARK 465 LYS C 387I REMARK 465 ASP C 416 REMARK 465 GLU C 417 REMARK 465 THR C 418 REMARK 465 GLU C 419 REMARK 465 ARG C 420 REMARK 465 VAL C 421 REMARK 465 ASN C 422 REMARK 465 VAL C 423 REMARK 465 ASN C 424 REMARK 465 GLY D 379 REMARK 465 HIS D 380 REMARK 465 MET D 381 REMARK 465 ASN D 386A REMARK 465 ARG D 386B REMARK 465 ALA D 386C REMARK 465 ARG D 386D REMARK 465 ARG D 386E REMARK 465 GLU D 386F REMARK 465 ARG D 386G REMARK 465 PRO D 386H REMARK 465 GLY D 386I REMARK 465 LYS D 386J REMARK 465 ARG D 386K REMARK 465 GLU D 414 REMARK 465 LEU D 415 REMARK 465 ASP D 416 REMARK 465 GLU D 417 REMARK 465 THR D 418 REMARK 465 GLU D 419 REMARK 465 ARG D 420 REMARK 465 VAL D 421 REMARK 465 ASN D 422 REMARK 465 VAL D 423 REMARK 465 ASN D 424 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 23 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 26 CE NZ REMARK 470 GLU A 84 CG CD OE1 OE2 REMARK 470 LYS A 147 CD CE NZ REMARK 470 LYS A 211 CG CD CE NZ REMARK 470 GLN A 214 CG CD OE1 NE2 REMARK 470 LYS A 260 CD CE NZ REMARK 470 ARG B 23 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 26 CE NZ REMARK 470 LYS B 41 CG CD CE NZ REMARK 470 LYS B 147 CD CE NZ REMARK 470 GLN B 214 CG CD OE1 NE2 REMARK 470 LYS B 260 CD CE NZ REMARK 470 GLU B 287 CG CD OE1 OE2 REMARK 470 GLU C 403 CG CD OE1 OE2 REMARK 470 LYS C 406 CE NZ REMARK 470 GLU D 403 CG CD OE1 OE2 REMARK 470 LYS D 406 CE NZ REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 SER A 85 CA CB OG REMARK 480 SER B 85 CA CB OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 95 154.08 82.53 REMARK 500 ARG A 96 -44.99 66.95 REMARK 500 TYR A 144 -111.07 -141.51 REMARK 500 SER A 224 -150.56 64.79 REMARK 500 ALA A 247 -123.03 -129.37 REMARK 500 HIS A 248 -10.75 73.25 REMARK 500 CYS A 273 42.16 38.30 REMARK 500 ASP A 277 43.25 -109.43 REMARK 500 ASP B 95 155.39 82.36 REMARK 500 ARG B 96 -43.96 66.49 REMARK 500 TYR B 144 -111.41 -141.55 REMARK 500 SER B 224 -150.57 64.22 REMARK 500 ALA B 247 -124.60 -131.30 REMARK 500 HIS B 248 -10.24 72.92 REMARK 500 CYS B 273 40.14 38.91 REMARK 500 ASP B 277 41.33 -109.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG B 23 PRO B 24 113.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 548 DISTANCE = 6.66 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 402 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 64 OD2 REMARK 620 2 HIS A 66 NE2 104.9 REMARK 620 3 ASP A 92 OD2 91.1 96.8 REMARK 620 4 PO4 A 403 O4 161.5 90.9 96.6 REMARK 620 5 HOH A 507 O 93.2 83.0 175.6 79.1 REMARK 620 6 HOH A 516 O 82.6 172.5 81.9 81.8 97.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 401 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 92 OD2 REMARK 620 2 ASN A 124 OD1 95.5 REMARK 620 3 HIS A 173 NE2 85.2 83.5 REMARK 620 4 HIS A 248 ND1 164.3 97.7 87.9 REMARK 620 5 PO4 A 403 O2 97.3 87.9 171.2 91.7 REMARK 620 6 HOH A 516 O 79.5 163.1 111.9 90.2 76.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 401 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 64 OD2 REMARK 620 2 HIS B 66 NE2 107.8 REMARK 620 3 ASP B 92 OD2 85.8 95.5 REMARK 620 4 PO4 B 403 O1 161.7 89.1 99.9 REMARK 620 5 HOH B 506 O 77.4 173.4 80.5 86.4 REMARK 620 6 HOH B 513 O 87.3 88.8 172.7 86.0 95.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 402 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 92 OD2 REMARK 620 2 ASN B 124 OD1 92.0 REMARK 620 3 HIS B 173 NE2 80.1 74.4 REMARK 620 4 HIS B 248 ND1 161.2 99.8 89.1 REMARK 620 5 PO4 B 403 O3 94.6 93.2 166.2 99.2 REMARK 620 6 HOH B 506 O 83.3 169.2 114.1 87.3 77.5 REMARK 620 N 1 2 3 4 5 DBREF 8SW5 A 7 300 UNP P62136 PP1A_HUMAN 7 300 DBREF 8SW5 B 7 300 UNP P62136 PP1A_HUMAN 7 300 DBREF 8SW5 C 379 424 PDB 8SW5 8SW5 379 424 DBREF 8SW5 D 379 424 PDB 8SW5 8SW5 379 424 SEQADV 8SW5 GLY A 2 UNP P62136 EXPRESSION TAG SEQADV 8SW5 HIS A 3 UNP P62136 EXPRESSION TAG SEQADV 8SW5 MET A 4 UNP P62136 EXPRESSION TAG SEQADV 8SW5 GLY A 5 UNP P62136 EXPRESSION TAG SEQADV 8SW5 SER A 6 UNP P62136 EXPRESSION TAG SEQADV 8SW5 GLY B 2 UNP P62136 EXPRESSION TAG SEQADV 8SW5 HIS B 3 UNP P62136 EXPRESSION TAG SEQADV 8SW5 MET B 4 UNP P62136 EXPRESSION TAG SEQADV 8SW5 GLY B 5 UNP P62136 EXPRESSION TAG SEQADV 8SW5 SER B 6 UNP P62136 EXPRESSION TAG SEQRES 1 A 299 GLY HIS MET GLY SER LEU ASN LEU ASP SER ILE ILE GLY SEQRES 2 A 299 ARG LEU LEU GLU VAL GLN GLY SER ARG PRO GLY LYS ASN SEQRES 3 A 299 VAL GLN LEU THR GLU ASN GLU ILE ARG GLY LEU CYS LEU SEQRES 4 A 299 LYS SER ARG GLU ILE PHE LEU SER GLN PRO ILE LEU LEU SEQRES 5 A 299 GLU LEU GLU ALA PRO LEU LYS ILE CYS GLY ASP ILE HIS SEQRES 6 A 299 GLY GLN TYR TYR ASP LEU LEU ARG LEU PHE GLU TYR GLY SEQRES 7 A 299 GLY PHE PRO PRO GLU SER ASN TYR LEU PHE LEU GLY ASP SEQRES 8 A 299 TYR VAL ASP ARG GLY LYS GLN SER LEU GLU THR ILE CYS SEQRES 9 A 299 LEU LEU LEU ALA TYR LYS ILE LYS TYR PRO GLU ASN PHE SEQRES 10 A 299 PHE LEU LEU ARG GLY ASN HIS GLU CYS ALA SER ILE ASN SEQRES 11 A 299 ARG ILE TYR GLY PHE TYR ASP GLU CYS LYS ARG ARG TYR SEQRES 12 A 299 ASN ILE LYS LEU TRP LYS THR PHE THR ASP CYS PHE ASN SEQRES 13 A 299 CYS LEU PRO ILE ALA ALA ILE VAL ASP GLU LYS ILE PHE SEQRES 14 A 299 CYS CYS HIS GLY GLY LEU SER PRO ASP LEU GLN SER MET SEQRES 15 A 299 GLU GLN ILE ARG ARG ILE MET ARG PRO THR ASP VAL PRO SEQRES 16 A 299 ASP GLN GLY LEU LEU CYS ASP LEU LEU TRP SER ASP PRO SEQRES 17 A 299 ASP LYS ASP VAL GLN GLY TRP GLY GLU ASN ASP ARG GLY SEQRES 18 A 299 VAL SER PHE THR PHE GLY ALA GLU VAL VAL ALA LYS PHE SEQRES 19 A 299 LEU HIS LYS HIS ASP LEU ASP LEU ILE CYS ARG ALA HIS SEQRES 20 A 299 GLN VAL VAL GLU ASP GLY TYR GLU PHE PHE ALA LYS ARG SEQRES 21 A 299 GLN LEU VAL THR LEU PHE SER ALA PRO ASN TYR CYS GLY SEQRES 22 A 299 GLU PHE ASP ASN ALA GLY ALA MET MET SER VAL ASP GLU SEQRES 23 A 299 THR LEU MET CYS SER PHE GLN ILE LEU LYS PRO ALA ASP SEQRES 1 B 299 GLY HIS MET GLY SER LEU ASN LEU ASP SER ILE ILE GLY SEQRES 2 B 299 ARG LEU LEU GLU VAL GLN GLY SER ARG PRO GLY LYS ASN SEQRES 3 B 299 VAL GLN LEU THR GLU ASN GLU ILE ARG GLY LEU CYS LEU SEQRES 4 B 299 LYS SER ARG GLU ILE PHE LEU SER GLN PRO ILE LEU LEU SEQRES 5 B 299 GLU LEU GLU ALA PRO LEU LYS ILE CYS GLY ASP ILE HIS SEQRES 6 B 299 GLY GLN TYR TYR ASP LEU LEU ARG LEU PHE GLU TYR GLY SEQRES 7 B 299 GLY PHE PRO PRO GLU SER ASN TYR LEU PHE LEU GLY ASP SEQRES 8 B 299 TYR VAL ASP ARG GLY LYS GLN SER LEU GLU THR ILE CYS SEQRES 9 B 299 LEU LEU LEU ALA TYR LYS ILE LYS TYR PRO GLU ASN PHE SEQRES 10 B 299 PHE LEU LEU ARG GLY ASN HIS GLU CYS ALA SER ILE ASN SEQRES 11 B 299 ARG ILE TYR GLY PHE TYR ASP GLU CYS LYS ARG ARG TYR SEQRES 12 B 299 ASN ILE LYS LEU TRP LYS THR PHE THR ASP CYS PHE ASN SEQRES 13 B 299 CYS LEU PRO ILE ALA ALA ILE VAL ASP GLU LYS ILE PHE SEQRES 14 B 299 CYS CYS HIS GLY GLY LEU SER PRO ASP LEU GLN SER MET SEQRES 15 B 299 GLU GLN ILE ARG ARG ILE MET ARG PRO THR ASP VAL PRO SEQRES 16 B 299 ASP GLN GLY LEU LEU CYS ASP LEU LEU TRP SER ASP PRO SEQRES 17 B 299 ASP LYS ASP VAL GLN GLY TRP GLY GLU ASN ASP ARG GLY SEQRES 18 B 299 VAL SER PHE THR PHE GLY ALA GLU VAL VAL ALA LYS PHE SEQRES 19 B 299 LEU HIS LYS HIS ASP LEU ASP LEU ILE CYS ARG ALA HIS SEQRES 20 B 299 GLN VAL VAL GLU ASP GLY TYR GLU PHE PHE ALA LYS ARG SEQRES 21 B 299 GLN LEU VAL THR LEU PHE SER ALA PRO ASN TYR CYS GLY SEQRES 22 B 299 GLU PHE ASP ASN ALA GLY ALA MET MET SER VAL ASP GLU SEQRES 23 B 299 THR LEU MET CYS SER PHE GLN ILE LEU LYS PRO ALA ASP SEQRES 1 C 47 GLY HIS MET LYS GLY ILE LEU LYS ASN ARG ALA ARG ARG SEQRES 2 C 47 GLU ARG PRO GLY LYS ARG LYS THR VAL THR TRP PRO GLU SEQRES 3 C 47 GLU GLY LYS LEU ARG GLU TYR PHE TYR PHE GLU LEU ASP SEQRES 4 C 47 GLU THR GLU ARG VAL ASN VAL ASN SEQRES 1 D 47 GLY HIS MET LYS GLY ILE LEU LYS ASN ARG ALA ARG ARG SEQRES 2 D 47 GLU ARG PRO GLY LYS ARG LYS THR VAL THR TRP PRO GLU SEQRES 3 D 47 GLU GLY LYS LEU ARG GLU TYR PHE TYR PHE GLU LEU ASP SEQRES 4 D 47 GLU THR GLU ARG VAL ASN VAL ASN HET MN A 401 1 HET MN A 402 1 HET PO4 A 403 5 HET MN B 401 1 HET MN B 402 1 HET PO4 B 403 5 HETNAM MN MANGANESE (II) ION HETNAM PO4 PHOSPHATE ION FORMUL 5 MN 4(MN 2+) FORMUL 7 PO4 2(O4 P 3-) FORMUL 11 HOH *83(H2 O) HELIX 1 AA1 ASN A 8 GLU A 18 1 11 HELIX 2 AA2 THR A 31 GLN A 49 1 19 HELIX 3 AA3 GLN A 68 GLY A 80 1 13 HELIX 4 AA4 GLN A 99 TYR A 114 1 16 HELIX 5 AA5 CYS A 127 ARG A 132 1 6 HELIX 6 AA6 GLY A 135 TYR A 144 1 10 HELIX 7 AA7 ASN A 145 ASN A 157 1 13 HELIX 8 AA8 MET A 183 ARG A 188 1 6 HELIX 9 AA9 GLY A 199 SER A 207 1 9 HELIX 10 AB1 GLY A 228 HIS A 239 1 12 HELIX 11 AB2 ASN A 271 GLU A 275 5 5 HELIX 12 AB3 ASN B 8 GLU B 18 1 11 HELIX 13 AB4 THR B 31 GLN B 49 1 19 HELIX 14 AB5 GLN B 68 GLY B 80 1 13 HELIX 15 AB6 GLN B 99 TYR B 114 1 16 HELIX 16 AB7 CYS B 127 ARG B 132 1 6 HELIX 17 AB8 GLY B 135 TYR B 144 1 10 HELIX 18 AB9 ASN B 145 ASN B 157 1 13 HELIX 19 AC1 MET B 183 ARG B 188 1 6 HELIX 20 AC2 GLY B 199 SER B 207 1 9 HELIX 21 AC3 GLY B 228 HIS B 239 1 12 HELIX 22 AC4 ASN B 271 GLU B 275 5 5 HELIX 23 AC5 GLU C 403 LYS C 406 5 4 HELIX 24 AC6 GLU D 403 LYS D 406 5 4 SHEET 1 AA1 6 LEU A 52 LEU A 55 0 SHEET 2 AA1 6 ALA A 162 VAL A 165 1 O ILE A 164 N LEU A 53 SHEET 3 AA1 6 ILE A 169 CYS A 171 -1 O CYS A 171 N ALA A 163 SHEET 4 AA1 6 LEU A 243 ARG A 246 1 O CYS A 245 N PHE A 170 SHEET 5 AA1 6 LEU A 263 LEU A 266 1 O LEU A 266 N ARG A 246 SHEET 6 AA1 6 TYR A 255 PHE A 258 -1 N PHE A 258 O LEU A 263 SHEET 1 AA2 6 PHE A 118 LEU A 120 0 SHEET 2 AA2 6 TYR A 87 PHE A 89 1 N PHE A 89 O PHE A 119 SHEET 3 AA2 6 LEU A 59 CYS A 62 1 N LYS A 60 O LEU A 88 SHEET 4 AA2 6 GLY A 280 VAL A 285 -1 O VAL A 285 N LEU A 59 SHEET 5 AA2 6 CYS A 291 PRO A 298 -1 O LEU A 296 N GLY A 280 SHEET 6 AA2 6 ARG C 408 PHE C 413 1 O GLU C 409 N ILE A 295 SHEET 1 AA3 3 ASP A 208 PRO A 209 0 SHEET 2 AA3 3 PHE A 225 PHE A 227 1 O PHE A 227 N ASP A 208 SHEET 3 AA3 3 TRP A 216 GLU A 218 -1 N GLY A 217 O THR A 226 SHEET 1 AA4 6 LEU B 52 LEU B 55 0 SHEET 2 AA4 6 ALA B 162 VAL B 165 1 O ILE B 164 N LEU B 53 SHEET 3 AA4 6 ILE B 169 CYS B 172 -1 O CYS B 171 N ALA B 163 SHEET 4 AA4 6 LEU B 243 ARG B 246 1 O CYS B 245 N PHE B 170 SHEET 5 AA4 6 LEU B 263 LEU B 266 1 O VAL B 264 N ILE B 244 SHEET 6 AA4 6 TYR B 255 PHE B 258 -1 N PHE B 258 O LEU B 263 SHEET 1 AA5 6 PHE B 118 LEU B 120 0 SHEET 2 AA5 6 TYR B 87 PHE B 89 1 N PHE B 89 O PHE B 119 SHEET 3 AA5 6 LEU B 59 CYS B 62 1 N LYS B 60 O LEU B 88 SHEET 4 AA5 6 GLY B 280 VAL B 285 -1 O VAL B 285 N LEU B 59 SHEET 5 AA5 6 CYS B 291 LEU B 296 -1 O LEU B 296 N GLY B 280 SHEET 6 AA5 6 ARG D 408 PHE D 411 1 O GLU D 409 N ILE B 295 SHEET 1 AA6 3 ASP B 208 PRO B 209 0 SHEET 2 AA6 3 PHE B 225 PHE B 227 1 O PHE B 227 N ASP B 208 SHEET 3 AA6 3 TRP B 216 GLU B 218 -1 N GLY B 217 O THR B 226 LINK OD2 ASP A 64 MN MN A 402 1555 1555 2.13 LINK NE2 HIS A 66 MN MN A 402 1555 1555 2.23 LINK OD2 ASP A 92 MN MN A 401 1555 1555 2.28 LINK OD2 ASP A 92 MN MN A 402 1555 1555 2.19 LINK OD1 ASN A 124 MN MN A 401 1555 1555 2.17 LINK NE2 HIS A 173 MN MN A 401 1555 1555 2.16 LINK ND1 HIS A 248 MN MN A 401 1555 1555 2.21 LINK MN MN A 401 O2 PO4 A 403 1555 1555 2.24 LINK MN MN A 401 O HOH A 516 1555 1555 2.17 LINK MN MN A 402 O4 PO4 A 403 1555 1555 2.03 LINK MN MN A 402 O HOH A 507 1555 1555 2.19 LINK MN MN A 402 O HOH A 516 1555 1555 2.15 LINK OD2 ASP B 64 MN MN B 401 1555 1555 2.16 LINK NE2 HIS B 66 MN MN B 401 1555 1555 2.19 LINK OD2 ASP B 92 MN MN B 401 1555 1555 2.30 LINK OD2 ASP B 92 MN MN B 402 1555 1555 2.18 LINK OD1 ASN B 124 MN MN B 402 1555 1555 2.18 LINK NE2 HIS B 173 MN MN B 402 1555 1555 2.21 LINK ND1 HIS B 248 MN MN B 402 1555 1555 2.22 LINK MN MN B 401 O1 PO4 B 403 1555 1555 2.50 LINK MN MN B 401 O HOH B 506 1555 1555 2.18 LINK MN MN B 401 O HOH B 513 1555 1555 2.18 LINK MN MN B 402 O3 PO4 B 403 1555 1555 1.96 LINK MN MN B 402 O HOH B 506 1555 1555 2.18 CISPEP 1 ARG A 23 PRO A 24 0 5.32 CISPEP 2 ALA A 57 PRO A 58 0 -0.07 CISPEP 3 PRO A 82 PRO A 83 0 2.69 CISPEP 4 ARG A 191 PRO A 192 0 1.49 CISPEP 5 ALA B 57 PRO B 58 0 -2.01 CISPEP 6 PRO B 82 PRO B 83 0 2.69 CISPEP 7 ARG B 191 PRO B 192 0 1.71 CRYST1 92.876 92.876 200.107 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010767 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010767 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004997 0.00000