HEADER RNA/IMMUNE SYSTEM 05-JUN-23 8T29 TITLE CRYSTAL STRUCTURE OF SCV PTE RNA IN COMPLEX WITH FAB BL3-6 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA (90-MER); COMPND 3 CHAIN: R; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: BL3-6 FAB HEAVY CHAIN; COMPND 7 CHAIN: A; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: BL3-6 FAB LIGHT CHAIN; COMPND 11 CHAIN: B; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SAGUARO CACTUS VIRUS; SOURCE 4 ORGANISM_TAXID: 52274; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 7 ORGANISM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 MOL_ID: 3; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS VIRAL RNA, FAB, TRANSLATION, 3'CITE, RNA, RNA-IMMUNE SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.OJHA,D.KOIRALA REVDAT 3 23-OCT-24 8T29 1 REMARK REVDAT 2 24-JUL-24 8T29 1 JRNL REVDAT 1 10-JAN-24 8T29 0 JRNL AUTH M.OJHA,J.VOGT,N.K.DAS,E.REDMOND,K.SINGH,H.A.BANNA,T.SADAT, JRNL AUTH 2 D.KOIRALA JRNL TITL STRUCTURE OF SAGUARO CACTUS VIRUS 3' TRANSLATIONAL ENHANCER JRNL TITL 2 MIMICS 5' CAP FOR EIF4E BINDING. JRNL REF PROC.NATL.ACAD.SCI.USA V. 121 77121 2024 JRNL REFN ESSN 1091-6490 JRNL PMID 38241435 JRNL DOI 10.1073/PNAS.2313677121 REMARK 2 REMARK 2 RESOLUTION. 3.13 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.13 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 64.69 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 18196 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.030 REMARK 3 FREE R VALUE TEST SET COUNT : 1825 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 64.6900 - 7.3600 0.99 1366 157 0.1396 0.1758 REMARK 3 2 7.3500 - 5.8400 1.00 1305 144 0.1863 0.2485 REMARK 3 3 5.8300 - 5.1000 1.00 1290 144 0.1557 0.2483 REMARK 3 4 5.1000 - 4.6300 1.00 1277 150 0.1586 0.2122 REMARK 3 5 4.6300 - 4.3000 1.00 1254 138 0.1646 0.2092 REMARK 3 6 4.3000 - 4.0500 1.00 1273 136 0.1793 0.2376 REMARK 3 7 4.0500 - 3.8400 1.00 1273 150 0.2339 0.3382 REMARK 3 8 3.8400 - 3.6800 1.00 1236 141 0.2714 0.3176 REMARK 3 9 3.6800 - 3.5400 0.99 1253 133 0.2646 0.3507 REMARK 3 10 3.5300 - 3.4100 0.99 1263 134 0.2783 0.3078 REMARK 3 11 3.4100 - 3.3100 0.99 1243 145 0.3192 0.3550 REMARK 3 12 3.3100 - 3.2100 0.96 1197 128 0.3671 0.4250 REMARK 3 13 3.2100 - 3.1300 0.90 1141 125 0.3972 0.4125 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.531 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.386 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 143.1 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 167.8 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5529 REMARK 3 ANGLE : 1.216 7947 REMARK 3 CHIRALITY : 0.061 963 REMARK 3 PLANARITY : 0.010 674 REMARK 3 DIHEDRAL : 17.155 1548 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 147 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.8052 -11.6644 -60.6239 REMARK 3 T TENSOR REMARK 3 T11: 0.9360 T22: 1.4042 REMARK 3 T33: 1.3408 T12: -0.0290 REMARK 3 T13: 0.0260 T23: -0.0488 REMARK 3 L TENSOR REMARK 3 L11: 0.5007 L22: 2.3288 REMARK 3 L33: 9.1221 L12: -0.9089 REMARK 3 L13: 0.4077 L23: 0.1979 REMARK 3 S TENSOR REMARK 3 S11: 0.1068 S12: 0.4161 S13: -0.0442 REMARK 3 S21: 0.0334 S22: 0.2300 S23: -0.6175 REMARK 3 S31: 0.2324 S32: 0.4412 S33: -0.3562 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 148 THROUGH 228 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.6471 -17.5709 -31.8438 REMARK 3 T TENSOR REMARK 3 T11: 1.7385 T22: 1.1514 REMARK 3 T33: 1.5724 T12: 0.2081 REMARK 3 T13: -0.3544 T23: 0.0055 REMARK 3 L TENSOR REMARK 3 L11: 4.2710 L22: 7.4172 REMARK 3 L33: 7.0556 L12: 0.2371 REMARK 3 L13: 0.4588 L23: -0.5979 REMARK 3 S TENSOR REMARK 3 S11: 0.3672 S12: -0.0186 S13: -0.7939 REMARK 3 S21: 1.6503 S22: 0.2438 S23: -0.8588 REMARK 3 S31: 1.3177 S32: 1.4777 S33: -0.5621 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 19 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.6906 -18.4542 -59.7173 REMARK 3 T TENSOR REMARK 3 T11: 1.3519 T22: 1.9991 REMARK 3 T33: 1.3852 T12: -0.1402 REMARK 3 T13: -0.0747 T23: -0.0186 REMARK 3 L TENSOR REMARK 3 L11: 2.2442 L22: 7.5841 REMARK 3 L33: 9.4627 L12: 0.4103 REMARK 3 L13: -1.1098 L23: -6.2529 REMARK 3 S TENSOR REMARK 3 S11: 0.5848 S12: 0.0621 S13: -0.2188 REMARK 3 S21: 1.3367 S22: -0.2399 S23: -0.1610 REMARK 3 S31: -1.5088 S32: 0.1131 S33: -0.4729 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 20 THROUGH 64 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.7965 -23.7284 -64.6401 REMARK 3 T TENSOR REMARK 3 T11: 1.2169 T22: 1.2518 REMARK 3 T33: 1.3491 T12: -0.1815 REMARK 3 T13: -0.1345 T23: -0.1004 REMARK 3 L TENSOR REMARK 3 L11: 4.6647 L22: 5.0236 REMARK 3 L33: 6.8206 L12: 1.6720 REMARK 3 L13: -1.9512 L23: -1.5699 REMARK 3 S TENSOR REMARK 3 S11: 0.2942 S12: -0.0727 S13: -0.4710 REMARK 3 S21: -0.1519 S22: 0.3323 S23: 0.6441 REMARK 3 S31: 0.9041 S32: -0.9978 S33: -0.4213 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 65 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.1452 -24.0459 -61.7826 REMARK 3 T TENSOR REMARK 3 T11: 1.0758 T22: 1.6054 REMARK 3 T33: 1.2836 T12: -0.1900 REMARK 3 T13: 0.0251 T23: -0.0671 REMARK 3 L TENSOR REMARK 3 L11: 3.9722 L22: 3.3487 REMARK 3 L33: 9.8792 L12: 0.0014 REMARK 3 L13: 0.2144 L23: 0.9096 REMARK 3 S TENSOR REMARK 3 S11: -0.1985 S12: 0.1407 S13: 0.6275 REMARK 3 S21: -0.1529 S22: -0.5623 S23: 0.0926 REMARK 3 S31: 1.6450 S32: 0.5865 S33: 0.6951 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 92 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.6166 -19.0155 -55.5605 REMARK 3 T TENSOR REMARK 3 T11: 1.2150 T22: 1.2456 REMARK 3 T33: 1.3985 T12: -0.1021 REMARK 3 T13: -0.0628 T23: -0.0595 REMARK 3 L TENSOR REMARK 3 L11: 3.0747 L22: 3.4094 REMARK 3 L33: 9.4095 L12: 0.5637 REMARK 3 L13: -1.9078 L23: -2.7284 REMARK 3 S TENSOR REMARK 3 S11: 0.7208 S12: 0.9231 S13: 0.0034 REMARK 3 S21: 0.7560 S22: 0.3736 S23: 0.5212 REMARK 3 S31: 0.0722 S32: -1.1946 S33: -0.7928 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 115 THROUGH 151 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.6617 -14.3923 -26.3279 REMARK 3 T TENSOR REMARK 3 T11: 1.7966 T22: 1.4482 REMARK 3 T33: 1.2582 T12: 0.0632 REMARK 3 T13: 0.0360 T23: 0.2784 REMARK 3 L TENSOR REMARK 3 L11: 5.8541 L22: 7.8445 REMARK 3 L33: 5.2032 L12: 4.1629 REMARK 3 L13: -1.4100 L23: 1.5754 REMARK 3 S TENSOR REMARK 3 S11: 0.1900 S12: -0.6210 S13: -0.8971 REMARK 3 S21: 1.6305 S22: 0.3254 S23: 0.0230 REMARK 3 S31: -0.1337 S32: 0.0488 S33: -0.4113 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 152 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.1838 -12.2750 -29.7351 REMARK 3 T TENSOR REMARK 3 T11: 1.4477 T22: 1.1431 REMARK 3 T33: 1.3396 T12: 0.2527 REMARK 3 T13: 0.0773 T23: 0.3320 REMARK 3 L TENSOR REMARK 3 L11: 6.1035 L22: 7.4211 REMARK 3 L33: 9.2395 L12: 4.4957 REMARK 3 L13: -0.8231 L23: 0.0830 REMARK 3 S TENSOR REMARK 3 S11: -0.5826 S12: -0.2613 S13: -0.3186 REMARK 3 S21: -0.4891 S22: 1.0137 S23: 0.1428 REMARK 3 S31: -1.5442 S32: 0.5051 S33: -0.2418 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 189 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.4338 -14.9308 -19.3851 REMARK 3 T TENSOR REMARK 3 T11: 1.9844 T22: 2.1492 REMARK 3 T33: 1.5081 T12: -0.3265 REMARK 3 T13: 0.2413 T23: 0.3151 REMARK 3 L TENSOR REMARK 3 L11: 5.2501 L22: 3.6114 REMARK 3 L33: 5.6113 L12: 1.3623 REMARK 3 L13: 3.3161 L23: 3.0745 REMARK 3 S TENSOR REMARK 3 S11: 0.2107 S12: -1.6537 S13: -0.9516 REMARK 3 S21: 0.2029 S22: 0.1958 S23: 0.0449 REMARK 3 S31: 0.1078 S32: -1.6268 S33: -0.5533 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'R' AND (RESID 1 THROUGH 20 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.6884 -6.6874-133.7122 REMARK 3 T TENSOR REMARK 3 T11: 2.6178 T22: 1.5168 REMARK 3 T33: 2.1549 T12: 0.0134 REMARK 3 T13: 0.1327 T23: 0.4112 REMARK 3 L TENSOR REMARK 3 L11: 4.8043 L22: 0.3279 REMARK 3 L33: 5.8939 L12: -2.1887 REMARK 3 L13: -5.7087 L23: 1.6813 REMARK 3 S TENSOR REMARK 3 S11: 0.8741 S12: 0.7158 S13: 0.1057 REMARK 3 S21: -0.4008 S22: -0.2517 S23: -0.1068 REMARK 3 S31: -1.6316 S32: -0.3458 S33: -0.6732 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'R' AND (RESID 21 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.4429 -17.8107 -97.7095 REMARK 3 T TENSOR REMARK 3 T11: 1.8577 T22: 1.9768 REMARK 3 T33: 1.9132 T12: -0.0539 REMARK 3 T13: -0.0348 T23: -0.2110 REMARK 3 L TENSOR REMARK 3 L11: 0.1368 L22: -1.3265 REMARK 3 L33: 6.6805 L12: 3.2052 REMARK 3 L13: 0.9416 L23: 1.0688 REMARK 3 S TENSOR REMARK 3 S11: -0.1849 S12: -0.7717 S13: 0.3581 REMARK 3 S21: -0.1775 S22: -0.0996 S23: 0.2875 REMARK 3 S31: 0.1783 S32: -0.1000 S33: 0.0830 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'R' AND (RESID 51 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.3628 -16.3853-127.9583 REMARK 3 T TENSOR REMARK 3 T11: 2.0987 T22: 1.4790 REMARK 3 T33: 1.5904 T12: -0.1978 REMARK 3 T13: 0.1235 T23: 0.0917 REMARK 3 L TENSOR REMARK 3 L11: 0.9824 L22: 0.4131 REMARK 3 L33: 6.7149 L12: -0.7171 REMARK 3 L13: 0.4323 L23: 1.8428 REMARK 3 S TENSOR REMARK 3 S11: 0.1584 S12: 0.7537 S13: 0.5028 REMARK 3 S21: -0.4323 S22: -0.1663 S23: -0.2009 REMARK 3 S31: -1.5864 S32: 0.4871 S33: -0.1368 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8T29 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUN-23. REMARK 100 THE DEPOSITION ID IS D_1000274413. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-NOV-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.6-8.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18416 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.120 REMARK 200 RESOLUTION RANGE LOW (A) : 160.590 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.12 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 2.16300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.20.1 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM SULFATE MONOHYDRATE, 0.1 REMARK 280 M TRIS PH 8.6, 20% W/V PEG 3350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 38.71850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 40.59400 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 160.59400 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 38.71850 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 40.59400 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 160.59400 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 38.71850 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 40.59400 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 160.59400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 38.71850 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 40.59400 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 160.59400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: R, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 1 REMARK 465 ILE A 2 REMARK 465 SER A 140 REMARK 465 LYS A 141 REMARK 465 SER A 142 REMARK 465 THR A 143 REMARK 465 SER A 144 REMARK 465 GLY A 145 REMARK 465 ASP A 229 REMARK 465 LYS A 230 REMARK 465 THR A 231 REMARK 465 HIS A 232 REMARK 465 THR A 233 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 51 -57.46 -122.69 REMARK 500 TYR A 57 -24.19 71.31 REMARK 500 SER A 88 59.99 34.33 REMARK 500 SER A 108 26.28 -140.53 REMARK 500 LYS A 129 119.91 -161.55 REMARK 500 PHE A 158 139.60 -172.54 REMARK 500 PRO A 225 -173.04 -68.33 REMARK 500 SER B 31 -131.86 40.04 REMARK 500 ALA B 52 -14.99 74.44 REMARK 500 ASP B 83 4.51 -64.87 REMARK 500 TYR B 141 137.39 -171.44 REMARK 500 REMARK 500 REMARK: NULL DBREF 8T29 R 1 90 GB 9629189 NC_001780.1 3640 3728 DBREF 8T29 A 1 233 PDB 8T29 8T29 1 233 DBREF 8T29 B 1 215 PDB 8T29 8T29 1 215 SEQADV 8T29 G R 1 GB 9629189 U 3640 ENGINEERED MUTATION SEQADV 8T29 G R 35 GB 9629189 C 3674 ENGINEERED MUTATION SEQADV 8T29 A R 36 GB 9629189 U 3675 ENGINEERED MUTATION SEQADV 8T29 A R 37 GB 9629189 G 3676 ENGINEERED MUTATION SEQADV 8T29 A R 38 GB 9629189 C 3677 ENGINEERED MUTATION SEQADV 8T29 C R 41 GB 9629189 INSERTION SEQADV 8T29 C R 90 GB 9629189 U 3728 ENGINEERED MUTATION SEQRES 1 R 90 G G U U G C U C G A C U G SEQRES 2 R 90 U G A G G G G A C C U A C SEQRES 3 R 90 C C A C U G U G G A A A C SEQRES 4 R 90 A C C A C A G G A A C U U SEQRES 5 R 90 C C A A C C U U C G G G U SEQRES 6 R 90 G G C G A G G U A G G G C SEQRES 7 R 90 A G A A G A G U G A C C SEQRES 1 A 233 GLU ILE SER GLU VAL GLN LEU VAL GLU SER GLY GLY GLY SEQRES 2 A 233 LEU VAL GLN PRO GLY GLY SER LEU ARG LEU SER CYS ALA SEQRES 3 A 233 ALA SER GLY PHE TYR ILE SER TYR SER SER ILE HIS TRP SEQRES 4 A 233 VAL ARG GLN ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA SEQRES 5 A 233 SER ILE SER PRO TYR SER GLY SER THR TYR TYR ALA ASP SEQRES 6 A 233 SER VAL LYS GLY ARG PHE THR ILE SER ALA ASP THR SER SEQRES 7 A 233 LYS ASN THR ALA TYR LEU GLN MET ASN SER LEU ARG ALA SEQRES 8 A 233 GLU ASP THR ALA VAL TYR TYR CYS ALA ARG GLN GLY TYR SEQRES 9 A 233 ARG ARG ARG SER GLY ARG GLY PHE ASP TYR TRP GLY GLN SEQRES 10 A 233 GLY THR LEU VAL THR VAL SER SER ALA SER THR LYS GLY SEQRES 11 A 233 PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SEQRES 12 A 233 SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP SEQRES 13 A 233 TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY SEQRES 14 A 233 ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU SEQRES 15 A 233 GLN SER SER GLY LEU TYR SER LEU SER SER VAL VAL THR SEQRES 16 A 233 VAL PRO SER SER SER LEU GLY THR GLN THR TYR ILE CYS SEQRES 17 A 233 ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS SEQRES 18 A 233 LYS VAL GLU PRO LYS SER CYS ASP LYS THR HIS THR SEQRES 1 B 215 SER ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER SEQRES 2 B 215 ALA SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SEQRES 3 B 215 SER GLN SER VAL SER SER ALA VAL ALA TRP TYR GLN GLN SEQRES 4 B 215 LYS PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR SER ALA SEQRES 5 B 215 SER SER LEU TYR SER GLY VAL PRO SER ARG PHE SER GLY SEQRES 6 B 215 SER ARG SER GLY THR ASP PHE THR LEU THR ILE SER SER SEQRES 7 B 215 LEU GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN SEQRES 8 B 215 SER TYR SER PHE PRO SER THR PHE GLY GLN GLY THR LYS SEQRES 9 B 215 VAL GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 B 215 ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR SEQRES 11 B 215 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 B 215 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 B 215 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 B 215 LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 B 215 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 B 215 GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SEQRES 17 B 215 SER PHE ASN ARG GLY GLU CYS HELIX 1 AA1 TYR A 31 SER A 35 5 5 HELIX 2 AA2 ARG A 90 THR A 94 5 5 HELIX 3 AA3 TYR A 104 GLY A 109 1 6 HELIX 4 AA4 SER A 199 GLY A 202 5 4 HELIX 5 AA5 LYS A 213 ASN A 216 5 4 HELIX 6 AA6 SER B 122 SER B 128 1 7 HELIX 7 AA7 LYS B 184 GLU B 188 1 5 SHEET 1 AA1 4 GLN A 6 SER A 10 0 SHEET 2 AA1 4 LEU A 21 SER A 28 -1 O SER A 24 N SER A 10 SHEET 3 AA1 4 THR A 81 MET A 86 -1 O MET A 86 N LEU A 21 SHEET 4 AA1 4 PHE A 71 ASP A 76 -1 N ASP A 76 O THR A 81 SHEET 1 AA2 6 GLY A 13 VAL A 15 0 SHEET 2 AA2 6 THR A 119 VAL A 123 1 O THR A 122 N GLY A 13 SHEET 3 AA2 6 ALA A 95 GLN A 102 -1 N TYR A 97 O THR A 119 SHEET 4 AA2 6 SER A 36 GLN A 42 -1 N VAL A 40 O TYR A 98 SHEET 5 AA2 6 GLU A 49 ILE A 54 -1 O GLU A 49 N ARG A 41 SHEET 6 AA2 6 THR A 61 TYR A 63 -1 O TYR A 62 N SER A 53 SHEET 1 AA3 4 GLY A 13 VAL A 15 0 SHEET 2 AA3 4 THR A 119 VAL A 123 1 O THR A 122 N GLY A 13 SHEET 3 AA3 4 ALA A 95 GLN A 102 -1 N TYR A 97 O THR A 119 SHEET 4 AA3 4 PHE A 112 TRP A 115 -1 O TYR A 114 N ARG A 101 SHEET 1 AA4 4 SER A 132 LEU A 136 0 SHEET 2 AA4 4 THR A 147 TYR A 157 -1 O LEU A 153 N PHE A 134 SHEET 3 AA4 4 TYR A 188 PRO A 197 -1 O TYR A 188 N TYR A 157 SHEET 4 AA4 4 VAL A 175 THR A 177 -1 N HIS A 176 O VAL A 193 SHEET 1 AA5 4 SER A 132 LEU A 136 0 SHEET 2 AA5 4 THR A 147 TYR A 157 -1 O LEU A 153 N PHE A 134 SHEET 3 AA5 4 TYR A 188 PRO A 197 -1 O TYR A 188 N TYR A 157 SHEET 4 AA5 4 VAL A 181 LEU A 182 -1 N VAL A 181 O SER A 189 SHEET 1 AA6 3 THR A 163 TRP A 166 0 SHEET 2 AA6 3 ILE A 207 HIS A 212 -1 O ASN A 209 N SER A 165 SHEET 3 AA6 3 THR A 217 LYS A 222 -1 O VAL A 219 N VAL A 210 SHEET 1 AA7 4 MET B 5 SER B 8 0 SHEET 2 AA7 4 VAL B 20 ALA B 26 -1 O THR B 23 N SER B 8 SHEET 3 AA7 4 ASP B 71 ILE B 76 -1 O PHE B 72 N CYS B 24 SHEET 4 AA7 4 ARG B 67 SER B 68 -1 N SER B 68 O ASP B 71 SHEET 1 AA8 6 SER B 11 SER B 13 0 SHEET 2 AA8 6 THR B 103 GLU B 106 1 O LYS B 104 N LEU B 12 SHEET 3 AA8 6 THR B 86 GLN B 91 -1 N TYR B 87 O THR B 103 SHEET 4 AA8 6 VAL B 34 GLN B 39 -1 N TYR B 37 O TYR B 88 SHEET 5 AA8 6 PRO B 45 TYR B 50 -1 O ILE B 49 N TRP B 36 SHEET 6 AA8 6 SER B 54 LEU B 55 -1 O SER B 54 N TYR B 50 SHEET 1 AA9 4 SER B 11 SER B 13 0 SHEET 2 AA9 4 THR B 103 GLU B 106 1 O LYS B 104 N LEU B 12 SHEET 3 AA9 4 THR B 86 GLN B 91 -1 N TYR B 87 O THR B 103 SHEET 4 AA9 4 THR B 98 PHE B 99 -1 O THR B 98 N GLN B 91 SHEET 1 AB1 4 SER B 115 PHE B 119 0 SHEET 2 AB1 4 THR B 130 PHE B 140 -1 O ASN B 138 N SER B 115 SHEET 3 AB1 4 TYR B 174 SER B 183 -1 O TYR B 174 N PHE B 140 SHEET 4 AB1 4 SER B 160 VAL B 164 -1 N SER B 163 O SER B 177 SHEET 1 AB2 3 LYS B 146 VAL B 151 0 SHEET 2 AB2 3 VAL B 192 THR B 198 -1 O GLU B 196 N GLN B 148 SHEET 3 AB2 3 VAL B 206 ASN B 211 -1 O PHE B 210 N TYR B 193 SSBOND 1 CYS A 25 CYS A 99 1555 1555 2.05 SSBOND 2 CYS A 152 CYS A 208 1555 1555 2.02 SSBOND 3 CYS B 24 CYS B 89 1555 1555 2.08 SSBOND 4 CYS B 135 CYS B 195 1555 1555 2.04 CISPEP 1 PHE A 158 PRO A 159 0 -2.73 CISPEP 2 GLU A 160 PRO A 161 0 -5.54 CISPEP 3 SER B 8 PRO B 9 0 2.47 CISPEP 4 PHE B 95 PRO B 96 0 -10.19 CISPEP 5 TYR B 141 PRO B 142 0 -3.47 CRYST1 77.437 81.188 321.188 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012914 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012317 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003113 0.00000 CONECT 2092 2668 CONECT 2668 2092 CONECT 3011 3425 CONECT 3425 3011 CONECT 3752 4249 CONECT 4249 3752 CONECT 4595 5074 CONECT 5074 4595 MASTER 444 0 0 7 46 0 0 6 5223 3 8 42 END