HEADER RNA/IMMUNE SYSTEM 06-JUN-23 8T2O TITLE CRYSTAL STRUCTURE OF SCV PTE G18U RNA IN COMPLEX WITH FAB BL3-6 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA (90-MER); COMPND 3 CHAIN: R; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: BL3-6 FAB HEAVY CHAIN; COMPND 8 CHAIN: A; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: BL3-6 FAB LIGHT CHAIN; COMPND 12 CHAIN: B; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SAGUARO CACTUS VIRUS; SOURCE 4 ORGANISM_TAXID: 52274; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 7 ORGANISM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 MOL_ID: 3; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS VIRAL RNA, FAB, TRANSLATION, 3'CITE, RNA, RNA-IMMUNE SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.OJHA,D.KOIRALA REVDAT 1 10-JAN-24 8T2O 0 JRNL AUTH M.OJHA,D.KOIRALA JRNL TITL CRYSTAL STRUCTURE OF SCV PTE G18U RNA IN COMPLEX WITH FAB JRNL TITL 2 BL3-6 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.29 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.29 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 64.99 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 15865 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.060 REMARK 3 FREE R VALUE TEST SET COUNT : 1596 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 64.9900 - 7.3200 0.97 1379 156 0.1392 0.2053 REMARK 3 2 7.3100 - 5.8100 1.00 1344 151 0.1945 0.2515 REMARK 3 3 5.8100 - 5.0700 1.00 1323 146 0.1585 0.2408 REMARK 3 4 5.0700 - 4.6100 0.96 1261 140 0.1506 0.1958 REMARK 3 5 4.6100 - 4.2800 1.00 1301 148 0.1888 0.2983 REMARK 3 6 4.2800 - 4.0300 1.00 1310 146 0.1988 0.2782 REMARK 3 7 4.0300 - 3.8300 1.00 1288 149 0.2263 0.3005 REMARK 3 8 3.8300 - 3.6600 1.00 1300 139 0.2486 0.3451 REMARK 3 9 3.6600 - 3.5200 1.00 1272 147 0.3198 0.3823 REMARK 3 10 3.5200 - 3.4000 1.00 1276 152 0.3201 0.3787 REMARK 3 11 3.4000 - 3.2900 0.93 1215 122 0.3775 0.3921 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.575 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.451 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 167.8 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 186.8 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 5540 REMARK 3 ANGLE : 1.232 7959 REMARK 3 CHIRALITY : 0.058 965 REMARK 3 PLANARITY : 0.010 676 REMARK 3 DIHEDRAL : 18.167 1550 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 146 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.9031 -11.7605 -60.5975 REMARK 3 T TENSOR REMARK 3 T11: 1.1526 T22: 1.6389 REMARK 3 T33: 1.5553 T12: -0.0158 REMARK 3 T13: 0.0008 T23: -0.0679 REMARK 3 L TENSOR REMARK 3 L11: 1.1850 L22: 3.2255 REMARK 3 L33: 9.2529 L12: -1.0162 REMARK 3 L13: 0.1674 L23: 0.7977 REMARK 3 S TENSOR REMARK 3 S11: 0.2080 S12: 0.5800 S13: -0.1619 REMARK 3 S21: 0.0843 S22: 0.1335 S23: -0.7669 REMARK 3 S31: 0.2377 S32: 0.2549 S33: -0.3643 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 147 THROUGH 228 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.7524 -17.8512 -32.1152 REMARK 3 T TENSOR REMARK 3 T11: 1.9504 T22: 1.3810 REMARK 3 T33: 1.6588 T12: 0.0803 REMARK 3 T13: -0.3398 T23: -0.0146 REMARK 3 L TENSOR REMARK 3 L11: 4.6471 L22: 8.1683 REMARK 3 L33: 7.5345 L12: -0.7272 REMARK 3 L13: -0.2380 L23: -2.7270 REMARK 3 S TENSOR REMARK 3 S11: 0.3317 S12: -0.3683 S13: -1.1809 REMARK 3 S21: 0.9598 S22: 0.3414 S23: -0.6920 REMARK 3 S31: 1.7071 S32: 1.1603 S33: -0.6617 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 19 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.7224 -18.5626 -60.0511 REMARK 3 T TENSOR REMARK 3 T11: 1.8132 T22: 1.8253 REMARK 3 T33: 1.7638 T12: -0.4092 REMARK 3 T13: -0.1092 T23: 0.0354 REMARK 3 L TENSOR REMARK 3 L11: 5.4941 L22: 9.1329 REMARK 3 L33: 4.4929 L12: -0.8192 REMARK 3 L13: -0.4492 L23: -5.8283 REMARK 3 S TENSOR REMARK 3 S11: 0.7936 S12: 0.1217 S13: 0.7277 REMARK 3 S21: 0.1979 S22: 0.0014 S23: 1.0392 REMARK 3 S31: 0.2594 S32: 1.3300 S33: -0.7678 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 20 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.5415 -23.6274 -65.8248 REMARK 3 T TENSOR REMARK 3 T11: 1.5748 T22: 1.6779 REMARK 3 T33: 1.8707 T12: -0.2776 REMARK 3 T13: -0.0199 T23: -0.1035 REMARK 3 L TENSOR REMARK 3 L11: 5.0762 L22: 5.4286 REMARK 3 L33: 6.6560 L12: 0.6835 REMARK 3 L13: -1.8196 L23: -0.8419 REMARK 3 S TENSOR REMARK 3 S11: 0.1607 S12: 0.3944 S13: -0.8488 REMARK 3 S21: -0.1786 S22: 0.5263 S23: 1.0682 REMARK 3 S31: 1.1134 S32: -0.7183 S33: -0.6352 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 77 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.9942 -19.7681 -62.1753 REMARK 3 T TENSOR REMARK 3 T11: 1.2416 T22: 1.7079 REMARK 3 T33: 1.4539 T12: -0.1327 REMARK 3 T13: -0.1605 T23: 0.0787 REMARK 3 L TENSOR REMARK 3 L11: 8.3024 L22: 6.1976 REMARK 3 L33: 5.2720 L12: 3.8148 REMARK 3 L13: -6.3382 L23: -1.1490 REMARK 3 S TENSOR REMARK 3 S11: 0.9921 S12: -0.2639 S13: 1.5750 REMARK 3 S21: 0.0906 S22: -0.1002 S23: 1.1348 REMARK 3 S31: 1.2877 S32: 0.1812 S33: -0.6892 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 103 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.1213 -23.8957 -37.2947 REMARK 3 T TENSOR REMARK 3 T11: 2.2427 T22: 1.4368 REMARK 3 T33: 1.5808 T12: -0.1343 REMARK 3 T13: -0.1326 T23: 0.1822 REMARK 3 L TENSOR REMARK 3 L11: 2.8275 L22: 1.1898 REMARK 3 L33: 6.7572 L12: 0.0198 REMARK 3 L13: -1.8605 L23: -0.3749 REMARK 3 S TENSOR REMARK 3 S11: -0.0314 S12: -0.3460 S13: -1.5312 REMARK 3 S21: 0.9409 S22: 1.0525 S23: -0.3593 REMARK 3 S31: 1.6626 S32: -1.8582 S33: -0.8153 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 120 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.0402 -14.3587 -27.4820 REMARK 3 T TENSOR REMARK 3 T11: 1.9604 T22: 1.6352 REMARK 3 T33: 1.8187 T12: -0.0226 REMARK 3 T13: 0.0107 T23: 0.2842 REMARK 3 L TENSOR REMARK 3 L11: 3.7024 L22: 5.6441 REMARK 3 L33: 7.8964 L12: 2.0243 REMARK 3 L13: -2.3724 L23: 1.1818 REMARK 3 S TENSOR REMARK 3 S11: -0.4296 S12: -0.4978 S13: -1.2989 REMARK 3 S21: 1.5243 S22: 0.8272 S23: 0.0619 REMARK 3 S31: -0.3383 S32: 0.2200 S33: -0.5503 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 145 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.0245 -7.7183 -24.6068 REMARK 3 T TENSOR REMARK 3 T11: 2.5167 T22: 2.0680 REMARK 3 T33: 1.8242 T12: 0.2944 REMARK 3 T13: 0.5762 T23: 0.3898 REMARK 3 L TENSOR REMARK 3 L11: 4.5651 L22: 3.7873 REMARK 3 L33: 8.0667 L12: -0.9028 REMARK 3 L13: -0.6963 L23: 4.9277 REMARK 3 S TENSOR REMARK 3 S11: -0.4982 S12: 0.0256 S13: 0.6729 REMARK 3 S21: 1.1752 S22: -0.0304 S23: 0.8915 REMARK 3 S31: -0.3939 S32: 0.3533 S33: 0.3353 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 162 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.6718 -14.9224 -32.1558 REMARK 3 T TENSOR REMARK 3 T11: 1.8109 T22: 1.1580 REMARK 3 T33: 1.8927 T12: 0.0491 REMARK 3 T13: 0.1417 T23: 0.1887 REMARK 3 L TENSOR REMARK 3 L11: 8.1661 L22: 7.5543 REMARK 3 L33: 3.1455 L12: 6.3187 REMARK 3 L13: 2.2621 L23: -1.2929 REMARK 3 S TENSOR REMARK 3 S11: -0.3046 S12: -0.6634 S13: -0.9346 REMARK 3 S21: -1.0332 S22: 0.1472 S23: 0.2443 REMARK 3 S31: -0.1864 S32: -0.7979 S33: -0.0821 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 189 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.4963 -15.1718 -19.6298 REMARK 3 T TENSOR REMARK 3 T11: 2.1515 T22: 2.2818 REMARK 3 T33: 1.9143 T12: -0.4490 REMARK 3 T13: 0.3895 T23: 0.3285 REMARK 3 L TENSOR REMARK 3 L11: 7.1260 L22: 6.5794 REMARK 3 L33: 8.2422 L12: 2.1816 REMARK 3 L13: 4.9177 L23: 2.9895 REMARK 3 S TENSOR REMARK 3 S11: 0.5597 S12: -1.6510 S13: -1.2038 REMARK 3 S21: 0.6708 S22: 0.1038 S23: 0.0039 REMARK 3 S31: 0.7357 S32: -1.0136 S33: -0.4685 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'R' AND (RESID 1 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.4009 -6.0603-147.0432 REMARK 3 T TENSOR REMARK 3 T11: 3.3679 T22: 2.2373 REMARK 3 T33: 2.8423 T12: 0.0543 REMARK 3 T13: 0.4802 T23: 0.3565 REMARK 3 L TENSOR REMARK 3 L11: 4.3958 L22: 1.9507 REMARK 3 L33: 4.5883 L12: 2.1199 REMARK 3 L13: 4.2721 L23: 2.8251 REMARK 3 S TENSOR REMARK 3 S11: 0.7406 S12: -1.0344 S13: -2.4234 REMARK 3 S21: -0.0641 S22: 0.6000 S23: -0.4815 REMARK 3 S31: -1.5671 S32: -1.3655 S33: -1.3113 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'R' AND (RESID 11 THROUGH 20 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.7867 -7.8339-122.0041 REMARK 3 T TENSOR REMARK 3 T11: 2.6478 T22: 1.3837 REMARK 3 T33: 2.2629 T12: -0.1351 REMARK 3 T13: 0.3134 T23: 0.0599 REMARK 3 L TENSOR REMARK 3 L11: 8.2942 L22: 0.6760 REMARK 3 L33: 6.0509 L12: -0.5748 REMARK 3 L13: -0.3621 L23: 1.9729 REMARK 3 S TENSOR REMARK 3 S11: -0.2857 S12: -0.3332 S13: -0.0800 REMARK 3 S21: -1.8534 S22: 0.3996 S23: -0.3041 REMARK 3 S31: -0.9123 S32: -0.1118 S33: -0.1883 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'R' AND (RESID 21 THROUGH 55 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.1466 -18.3541-101.3486 REMARK 3 T TENSOR REMARK 3 T11: 2.1704 T22: 2.2787 REMARK 3 T33: 2.1728 T12: -0.1616 REMARK 3 T13: -0.0953 T23: -0.1871 REMARK 3 L TENSOR REMARK 3 L11: -2.2325 L22: -0.6689 REMARK 3 L33: 3.5103 L12: 0.7922 REMARK 3 L13: 1.4542 L23: 1.2507 REMARK 3 S TENSOR REMARK 3 S11: -0.1088 S12: -0.8563 S13: 0.5141 REMARK 3 S21: -0.1864 S22: -0.1577 S23: 0.1834 REMARK 3 S31: 0.5575 S32: -0.5343 S33: 0.1977 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'R' AND (RESID 56 THROUGH 80 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.8031 -20.5976-121.4622 REMARK 3 T TENSOR REMARK 3 T11: 2.3839 T22: 1.8192 REMARK 3 T33: 2.0947 T12: -0.1151 REMARK 3 T13: 0.2071 T23: -0.0138 REMARK 3 L TENSOR REMARK 3 L11: 1.0239 L22: 5.6959 REMARK 3 L33: 2.6337 L12: 2.4400 REMARK 3 L13: 2.0894 L23: 3.2520 REMARK 3 S TENSOR REMARK 3 S11: -0.0123 S12: 0.4722 S13: 0.2930 REMARK 3 S21: -0.5149 S22: 0.5715 S23: -1.2443 REMARK 3 S31: -1.0488 S32: 0.6497 S33: -0.3316 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'R' AND (RESID 81 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.5933 -4.8036-149.5949 REMARK 3 T TENSOR REMARK 3 T11: 3.4187 T22: 2.4299 REMARK 3 T33: 2.7754 T12: -0.0340 REMARK 3 T13: 0.1014 T23: 0.6688 REMARK 3 L TENSOR REMARK 3 L11: 7.3064 L22: 7.0417 REMARK 3 L33: 3.3425 L12: 1.7032 REMARK 3 L13: -0.6782 L23: 0.7804 REMARK 3 S TENSOR REMARK 3 S11: 0.0094 S12: -1.7553 S13: -2.5425 REMARK 3 S21: 0.1692 S22: 0.3006 S23: -0.9499 REMARK 3 S31: -3.7685 S32: 1.3167 S33: -0.5263 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8T2O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUN-23. REMARK 100 THE DEPOSITION ID IS D_1000275092. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-FEB-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.6-8.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15976 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.290 REMARK 200 RESOLUTION RANGE LOW (A) : 161.380 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.29 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 1.85300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM SULFATE MONOHYDRATE, 0.1 REMARK 280 M TRIS PH 8.6, 20% W/V PEG 3350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 38.88450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 40.77550 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 161.38400 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 38.88450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 40.77550 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 161.38400 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 38.88450 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 40.77550 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 161.38400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 38.88450 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 40.77550 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 161.38400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: R, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 1 REMARK 465 ILE A 2 REMARK 465 SER A 142 REMARK 465 THR A 143 REMARK 465 SER A 144 REMARK 465 GLY A 145 REMARK 465 ASP A 229 REMARK 465 LYS A 230 REMARK 465 THR A 231 REMARK 465 HIS A 232 REMARK 465 THR A 233 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 G R 34 C8 - N9 - C4 ANGL. DEV. = 2.6 DEGREES REMARK 500 C R 57 C6 - N1 - C2 ANGL. DEV. = -2.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 51 -62.64 -109.16 REMARK 500 TYR A 57 -18.94 69.70 REMARK 500 ALA A 64 141.18 -39.18 REMARK 500 ALA A 95 173.00 179.43 REMARK 500 SER A 108 26.18 -144.44 REMARK 500 SER A 139 -82.55 -102.91 REMARK 500 SER A 140 23.49 -158.78 REMARK 500 PHE A 158 137.91 -170.95 REMARK 500 PRO A 225 -174.63 -68.89 REMARK 500 SER B 8 143.08 -171.62 REMARK 500 LEU B 12 113.45 -161.16 REMARK 500 SER B 31 -132.02 48.66 REMARK 500 PRO B 41 109.78 -52.25 REMARK 500 ALA B 52 -13.40 74.03 REMARK 500 SER B 61 -7.29 -55.26 REMARK 500 ASP B 83 12.29 -69.51 REMARK 500 SER B 94 145.21 -173.02 REMARK 500 SER B 128 3.18 -67.85 REMARK 500 TYR B 141 138.06 -170.08 REMARK 500 LYS B 170 -61.31 -103.10 REMARK 500 REMARK 500 REMARK: NULL DBREF 8T2O R 1 90 GB 9629189 NC_001780.1 3640 3728 DBREF 8T2O A 1 233 PDB 8T2O 8T2O 1 233 DBREF 8T2O B 1 215 PDB 8T2O 8T2O 1 215 SEQADV 8T2O G R 1 GB 9629189 U 3640 ENGINEERED MUTATION SEQADV 8T2O U R 18 GB 9629189 G 3657 ENGINEERED MUTATION SEQADV 8T2O G R 35 GB 9629189 C 3674 ENGINEERED MUTATION SEQADV 8T2O A R 36 GB 9629189 U 3675 ENGINEERED MUTATION SEQADV 8T2O A R 37 GB 9629189 G 3676 ENGINEERED MUTATION SEQADV 8T2O A R 38 GB 9629189 C 3677 ENGINEERED MUTATION SEQADV 8T2O C R 41 GB 9629189 INSERTION SEQADV 8T2O C R 90 GB 9629189 U 3728 ENGINEERED MUTATION SEQRES 1 R 90 G G U U G C U C G A C U G SEQRES 2 R 90 U G A G U G G A C C U A C SEQRES 3 R 90 C C A C U G U G G A A A C SEQRES 4 R 90 A C C A C A G G A A C U U SEQRES 5 R 90 C C A A C C U U C G G G U SEQRES 6 R 90 G G C G A G G U A G G G C SEQRES 7 R 90 A G A A G A G U G A C C SEQRES 1 A 233 GLU ILE SER GLU VAL GLN LEU VAL GLU SER GLY GLY GLY SEQRES 2 A 233 LEU VAL GLN PRO GLY GLY SER LEU ARG LEU SER CYS ALA SEQRES 3 A 233 ALA SER GLY PHE TYR ILE SER TYR SER SER ILE HIS TRP SEQRES 4 A 233 VAL ARG GLN ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA SEQRES 5 A 233 SER ILE SER PRO TYR SER GLY SER THR TYR TYR ALA ASP SEQRES 6 A 233 SER VAL LYS GLY ARG PHE THR ILE SER ALA ASP THR SER SEQRES 7 A 233 LYS ASN THR ALA TYR LEU GLN MET ASN SER LEU ARG ALA SEQRES 8 A 233 GLU ASP THR ALA VAL TYR TYR CYS ALA ARG GLN GLY TYR SEQRES 9 A 233 ARG ARG ARG SER GLY ARG GLY PHE ASP TYR TRP GLY GLN SEQRES 10 A 233 GLY THR LEU VAL THR VAL SER SER ALA SER THR LYS GLY SEQRES 11 A 233 PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SEQRES 12 A 233 SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP SEQRES 13 A 233 TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY SEQRES 14 A 233 ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU SEQRES 15 A 233 GLN SER SER GLY LEU TYR SER LEU SER SER VAL VAL THR SEQRES 16 A 233 VAL PRO SER SER SER LEU GLY THR GLN THR TYR ILE CYS SEQRES 17 A 233 ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS SEQRES 18 A 233 LYS VAL GLU PRO LYS SER CYS ASP LYS THR HIS THR SEQRES 1 B 215 SER ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER SEQRES 2 B 215 ALA SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SEQRES 3 B 215 SER GLN SER VAL SER SER ALA VAL ALA TRP TYR GLN GLN SEQRES 4 B 215 LYS PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR SER ALA SEQRES 5 B 215 SER SER LEU TYR SER GLY VAL PRO SER ARG PHE SER GLY SEQRES 6 B 215 SER ARG SER GLY THR ASP PHE THR LEU THR ILE SER SER SEQRES 7 B 215 LEU GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN SEQRES 8 B 215 SER TYR SER PHE PRO SER THR PHE GLY GLN GLY THR LYS SEQRES 9 B 215 VAL GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 B 215 ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR SEQRES 11 B 215 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 B 215 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 B 215 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 B 215 LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 B 215 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 B 215 GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SEQRES 17 B 215 SER PHE ASN ARG GLY GLU CYS HELIX 1 AA1 TYR A 31 SER A 35 5 5 HELIX 2 AA2 ASP A 65 LYS A 68 5 4 HELIX 3 AA3 ARG A 90 THR A 94 5 5 HELIX 4 AA4 TYR A 104 GLY A 109 1 6 HELIX 5 AA5 SER A 199 THR A 203 5 5 HELIX 6 AA6 LYS A 213 ASN A 216 5 4 HELIX 7 AA7 SER B 122 SER B 128 1 7 HELIX 8 AA8 LYS B 184 GLU B 188 1 5 SHEET 1 AA1 4 GLN A 6 SER A 10 0 SHEET 2 AA1 4 LEU A 21 SER A 28 -1 O SER A 24 N SER A 10 SHEET 3 AA1 4 THR A 81 MET A 86 -1 O MET A 86 N LEU A 21 SHEET 4 AA1 4 PHE A 71 ASP A 76 -1 N SER A 74 O TYR A 83 SHEET 1 AA2 6 GLY A 13 VAL A 15 0 SHEET 2 AA2 6 THR A 119 VAL A 123 1 O THR A 122 N GLY A 13 SHEET 3 AA2 6 ALA A 95 GLN A 102 -1 N ALA A 95 O VAL A 121 SHEET 4 AA2 6 ILE A 37 GLN A 42 -1 N VAL A 40 O TYR A 98 SHEET 5 AA2 6 LEU A 48 ILE A 54 -1 O VAL A 51 N TRP A 39 SHEET 6 AA2 6 THR A 61 TYR A 63 -1 O TYR A 62 N SER A 53 SHEET 1 AA3 4 GLY A 13 VAL A 15 0 SHEET 2 AA3 4 THR A 119 VAL A 123 1 O THR A 122 N GLY A 13 SHEET 3 AA3 4 ALA A 95 GLN A 102 -1 N ALA A 95 O VAL A 121 SHEET 4 AA3 4 PHE A 112 TRP A 115 -1 O TYR A 114 N ARG A 101 SHEET 1 AA4 4 SER A 132 LEU A 136 0 SHEET 2 AA4 4 THR A 147 TYR A 157 -1 O LEU A 153 N PHE A 134 SHEET 3 AA4 4 TYR A 188 PRO A 197 -1 O TYR A 188 N TYR A 157 SHEET 4 AA4 4 VAL A 175 THR A 177 -1 N HIS A 176 O VAL A 193 SHEET 1 AA5 4 SER A 132 LEU A 136 0 SHEET 2 AA5 4 THR A 147 TYR A 157 -1 O LEU A 153 N PHE A 134 SHEET 3 AA5 4 TYR A 188 PRO A 197 -1 O TYR A 188 N TYR A 157 SHEET 4 AA5 4 VAL A 181 LEU A 182 -1 N VAL A 181 O SER A 189 SHEET 1 AA6 3 THR A 163 TRP A 166 0 SHEET 2 AA6 3 ILE A 207 HIS A 212 -1 O ASN A 209 N SER A 165 SHEET 3 AA6 3 THR A 217 LYS A 222 -1 O THR A 217 N HIS A 212 SHEET 1 AA7 4 MET B 5 SER B 8 0 SHEET 2 AA7 4 VAL B 20 ALA B 26 -1 O THR B 23 N SER B 8 SHEET 3 AA7 4 ASP B 71 ILE B 76 -1 O PHE B 72 N CYS B 24 SHEET 4 AA7 4 PHE B 63 SER B 64 -1 N SER B 64 O THR B 75 SHEET 1 AA8 4 MET B 5 SER B 8 0 SHEET 2 AA8 4 VAL B 20 ALA B 26 -1 O THR B 23 N SER B 8 SHEET 3 AA8 4 ASP B 71 ILE B 76 -1 O PHE B 72 N CYS B 24 SHEET 4 AA8 4 ARG B 67 SER B 68 -1 N SER B 68 O ASP B 71 SHEET 1 AA9 6 SER B 11 SER B 13 0 SHEET 2 AA9 6 THR B 103 GLU B 106 1 O GLU B 106 N LEU B 12 SHEET 3 AA9 6 ALA B 85 GLN B 91 -1 N ALA B 85 O VAL B 105 SHEET 4 AA9 6 VAL B 34 GLN B 39 -1 N TYR B 37 O TYR B 88 SHEET 5 AA9 6 LYS B 46 TYR B 50 -1 O LEU B 48 N TRP B 36 SHEET 6 AA9 6 SER B 54 LEU B 55 -1 O SER B 54 N TYR B 50 SHEET 1 AB1 4 SER B 11 SER B 13 0 SHEET 2 AB1 4 THR B 103 GLU B 106 1 O GLU B 106 N LEU B 12 SHEET 3 AB1 4 ALA B 85 GLN B 91 -1 N ALA B 85 O VAL B 105 SHEET 4 AB1 4 THR B 98 PHE B 99 -1 O THR B 98 N GLN B 91 SHEET 1 AB2 4 SER B 115 PHE B 119 0 SHEET 2 AB2 4 THR B 130 PHE B 140 -1 O VAL B 134 N PHE B 119 SHEET 3 AB2 4 TYR B 174 SER B 183 -1 O SER B 178 N CYS B 135 SHEET 4 AB2 4 SER B 160 GLN B 161 -1 N GLN B 161 O THR B 179 SHEET 1 AB3 3 ALA B 145 VAL B 151 0 SHEET 2 AB3 3 VAL B 192 HIS B 199 -1 O GLU B 196 N GLN B 148 SHEET 3 AB3 3 VAL B 206 ASN B 211 -1 O VAL B 206 N VAL B 197 SSBOND 1 CYS A 25 CYS A 99 1555 1555 2.05 SSBOND 2 CYS A 152 CYS A 208 1555 1555 2.03 SSBOND 3 CYS B 24 CYS B 89 1555 1555 2.06 SSBOND 4 CYS B 135 CYS B 195 1555 1555 2.03 CISPEP 1 PHE A 158 PRO A 159 0 -1.81 CISPEP 2 GLU A 160 PRO A 161 0 1.64 CISPEP 3 SER B 8 PRO B 9 0 14.09 CISPEP 4 PHE B 95 PRO B 96 0 -5.54 CISPEP 5 TYR B 141 PRO B 142 0 7.75 CRYST1 77.769 81.551 322.768 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012859 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012262 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003098 0.00000