HEADER VIRAL PROTEIN,HYDROLASE/INHIBITOR 14-JUN-23 8T5V TITLE INFLUENZA PA-N ENDONUCLEASE A36V MUTANT WITH BALOXAVIR COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYMERASE ACIDIC PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL DOMAIN; COMPND 5 SYNONYM: RNA-DIRECTED RNA POLYMERASE SUBUNIT P2; COMPND 6 EC: 3.1.-.-; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS (A/CALIFORNIA/04/2009(H1N1)); SOURCE 3 ORGANISM_TAXID: 641501; SOURCE 4 STRAIN: A/CALIFORNIA/04/2009(H1N1); SOURCE 5 GENE: PA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS INFLUENZA ENDONUCLEASE, RESISTANCE, DRUG DISCOVERY, METAL-BINDING KEYWDS 2 PHARMACOPHORE, ANTIVIRAL PROTEIN, VIRAL PROTEIN, HYDROLASE-INHIBITOR KEYWDS 3 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.J.KOHLBRAND,S.M.COHEN REVDAT 1 28-AUG-24 8T5V 0 JRNL AUTH A.J.KOHLBRAND,R.W.STOKES,B.SANKARAN,S.M.COHEN JRNL TITL STRUCTURAL STUDIES OF INHIBITORS WITH CLINICALLY RELEVANT JRNL TITL 2 INFLUENZA ENDONUCLEASE VARIANTS. JRNL REF BIOCHEMISTRY V. 63 264 2024 JRNL REFN ISSN 0006-2960 JRNL PMID 38190441 JRNL DOI 10.1021/ACS.BIOCHEM.3C00536 REMARK 2 REMARK 2 RESOLUTION. 1.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 64.71 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.6 REMARK 3 NUMBER OF REFLECTIONS : 16971 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.237 REMARK 3 R VALUE (WORKING SET) : 0.232 REMARK 3 FREE R VALUE : 0.284 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.540 REMARK 3 FREE R VALUE TEST SET COUNT : 1619 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 64.7100 - 4.1000 1.00 1644 173 0.1917 0.2191 REMARK 3 2 4.1000 - 3.2500 1.00 1517 161 0.1940 0.2700 REMARK 3 3 3.2500 - 2.8400 1.00 1504 158 0.2534 0.3451 REMARK 3 4 2.8400 - 2.5800 1.00 1473 156 0.2695 0.3494 REMARK 3 5 2.5800 - 2.4000 1.00 1471 155 0.2952 0.3459 REMARK 3 6 2.4000 - 2.2600 1.00 1452 154 0.2795 0.3200 REMARK 3 7 2.2600 - 2.1400 1.00 1460 154 0.3056 0.3518 REMARK 3 8 2.1400 - 2.0500 1.00 1453 153 0.3275 0.3287 REMARK 3 9 2.0500 - 1.9700 1.00 1429 151 0.3643 0.3987 REMARK 3 10 1.9700 - 1.9000 0.93 1345 142 0.4101 0.4409 REMARK 3 11 1.9000 - 1.8400 0.38 549 54 0.4058 0.4880 REMARK 3 12 1.8400 - 1.7900 0.04 55 8 0.7919 0.8376 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.305 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 36.702 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 44.49 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1513 REMARK 3 ANGLE : 1.416 2039 REMARK 3 CHIRALITY : 0.065 216 REMARK 3 PLANARITY : 0.011 257 REMARK 3 DIHEDRAL : 19.563 557 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -1 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.3091 5.9707 -17.3539 REMARK 3 T TENSOR REMARK 3 T11: 0.5403 T22: 0.4384 REMARK 3 T33: 0.5760 T12: 0.1171 REMARK 3 T13: 0.0882 T23: -0.1322 REMARK 3 L TENSOR REMARK 3 L11: 2.7636 L22: 2.4967 REMARK 3 L33: 5.2542 L12: 5.6202 REMARK 3 L13: 0.2154 L23: -0.6613 REMARK 3 S TENSOR REMARK 3 S11: -0.3448 S12: 0.9140 S13: -1.1412 REMARK 3 S21: -0.7565 S22: -0.0132 S23: 0.0111 REMARK 3 S31: 0.8320 S32: 0.1604 S33: 0.1552 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.7669 8.6949 -22.4985 REMARK 3 T TENSOR REMARK 3 T11: 0.3794 T22: 0.4763 REMARK 3 T33: 0.3700 T12: 0.0482 REMARK 3 T13: -0.0176 T23: -0.1369 REMARK 3 L TENSOR REMARK 3 L11: 9.3614 L22: 8.0748 REMARK 3 L33: 7.8910 L12: 0.6838 REMARK 3 L13: -0.3294 L23: -4.1729 REMARK 3 S TENSOR REMARK 3 S11: -0.3778 S12: 1.1263 S13: -0.3106 REMARK 3 S21: -0.8989 S22: 0.1828 S23: 0.6859 REMARK 3 S31: 0.4774 S32: -0.5486 S33: 0.3176 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.5016 10.2703 -10.9041 REMARK 3 T TENSOR REMARK 3 T11: 0.3506 T22: 0.3336 REMARK 3 T33: 0.2987 T12: 0.0060 REMARK 3 T13: -0.0197 T23: -0.0339 REMARK 3 L TENSOR REMARK 3 L11: 9.1633 L22: 3.2013 REMARK 3 L33: 2.9179 L12: 1.0597 REMARK 3 L13: -6.4130 L23: -0.6914 REMARK 3 S TENSOR REMARK 3 S11: -0.3029 S12: 0.3134 S13: -0.4440 REMARK 3 S21: 0.0282 S22: -0.0187 S23: -0.2669 REMARK 3 S31: 0.1217 S32: -0.6172 S33: 0.1892 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.5471 9.1772 -9.6838 REMARK 3 T TENSOR REMARK 3 T11: 0.3921 T22: 0.7316 REMARK 3 T33: 0.3729 T12: -0.1036 REMARK 3 T13: 0.0848 T23: -0.0234 REMARK 3 L TENSOR REMARK 3 L11: 5.7888 L22: 3.7592 REMARK 3 L33: 8.5022 L12: -2.2787 REMARK 3 L13: 2.0026 L23: 3.6304 REMARK 3 S TENSOR REMARK 3 S11: 0.3641 S12: -0.9631 S13: -0.1912 REMARK 3 S21: -0.2037 S22: -0.1414 S23: 0.1044 REMARK 3 S31: 0.0630 S32: -0.2950 S33: -0.2886 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 99 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.9171 17.0423 -5.9542 REMARK 3 T TENSOR REMARK 3 T11: 0.3744 T22: 0.5393 REMARK 3 T33: 0.4038 T12: 0.0749 REMARK 3 T13: 0.0628 T23: -0.0844 REMARK 3 L TENSOR REMARK 3 L11: 4.1823 L22: 2.8085 REMARK 3 L33: 2.2251 L12: 1.5331 REMARK 3 L13: 0.3228 L23: -1.2391 REMARK 3 S TENSOR REMARK 3 S11: 0.3669 S12: -0.6440 S13: 0.0489 REMARK 3 S21: 0.1894 S22: -0.1753 S23: 0.3693 REMARK 3 S31: -0.1350 S32: -0.4079 S33: -0.1140 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.7689 27.3680 -8.5347 REMARK 3 T TENSOR REMARK 3 T11: 0.5883 T22: 0.5193 REMARK 3 T33: 0.5823 T12: 0.0375 REMARK 3 T13: 0.0234 T23: -0.0859 REMARK 3 L TENSOR REMARK 3 L11: 7.5134 L22: 2.4693 REMARK 3 L33: 2.5946 L12: -4.8556 REMARK 3 L13: 4.0618 L23: -2.1489 REMARK 3 S TENSOR REMARK 3 S11: -0.1027 S12: -0.0888 S13: 1.2513 REMARK 3 S21: -0.3492 S22: -0.4559 S23: -0.2231 REMARK 3 S31: -0.4373 S32: -0.4475 S33: 0.6403 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 139 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.3036 22.2596 -4.0937 REMARK 3 T TENSOR REMARK 3 T11: 0.5473 T22: 0.5117 REMARK 3 T33: 0.4989 T12: 0.1328 REMARK 3 T13: -0.0112 T23: -0.0996 REMARK 3 L TENSOR REMARK 3 L11: 3.6504 L22: 4.7330 REMARK 3 L33: 6.4480 L12: 4.2861 REMARK 3 L13: -3.3020 L23: -3.7097 REMARK 3 S TENSOR REMARK 3 S11: -0.9358 S12: -0.3929 S13: 0.4821 REMARK 3 S21: 0.5571 S22: 0.9263 S23: 0.8193 REMARK 3 S31: -0.9204 S32: -1.1739 S33: -0.0137 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 150 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.2261 20.0467 2.1203 REMARK 3 T TENSOR REMARK 3 T11: 0.5283 T22: 0.5178 REMARK 3 T33: 0.3594 T12: 0.0443 REMARK 3 T13: -0.0014 T23: -0.1045 REMARK 3 L TENSOR REMARK 3 L11: 8.1734 L22: 5.0466 REMARK 3 L33: 4.4953 L12: 1.2668 REMARK 3 L13: -2.4364 L23: -1.8091 REMARK 3 S TENSOR REMARK 3 S11: 0.1550 S12: -1.1664 S13: 0.3745 REMARK 3 S21: 1.0631 S22: -0.2567 S23: -0.0508 REMARK 3 S31: -0.6306 S32: -0.3450 S33: 0.0411 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 165 THROUGH 185 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.0747 11.6140 -2.8910 REMARK 3 T TENSOR REMARK 3 T11: 0.2866 T22: 0.2716 REMARK 3 T33: 0.2611 T12: 0.0435 REMARK 3 T13: -0.0022 T23: 0.0012 REMARK 3 L TENSOR REMARK 3 L11: 4.7825 L22: 6.6013 REMARK 3 L33: 8.7321 L12: 0.7285 REMARK 3 L13: -2.4056 L23: -1.7339 REMARK 3 S TENSOR REMARK 3 S11: -0.0574 S12: -0.6678 S13: -0.5316 REMARK 3 S21: 0.1984 S22: -0.1936 S23: 0.2343 REMARK 3 S31: 0.1779 S32: 0.1888 S33: 0.2107 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 186 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.9527 20.8743 -15.3000 REMARK 3 T TENSOR REMARK 3 T11: 0.3875 T22: 0.3436 REMARK 3 T33: 0.2824 T12: 0.0616 REMARK 3 T13: 0.0263 T23: -0.0027 REMARK 3 L TENSOR REMARK 3 L11: 3.9653 L22: 2.8187 REMARK 3 L33: 5.5842 L12: 0.3341 REMARK 3 L13: 0.4088 L23: -6.4479 REMARK 3 S TENSOR REMARK 3 S11: -0.1643 S12: -0.1366 S13: -0.1091 REMARK 3 S21: 0.1296 S22: 0.0001 S23: -0.0704 REMARK 3 S31: -0.3677 S32: -0.1012 S33: 0.2674 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8T5V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1000275309. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-APR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16971 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.790 REMARK 200 RESOLUTION RANGE LOW (A) : 64.760 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 33.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 32% PEG (MW 4000 G/MOL), 100 MM TRIS REMARK 280 (PH 8.35), AND 220 MM SODIUM ACETATE, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 306K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 81.07933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 40.53967 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 81.07933 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 40.53967 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 81.07933 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 40.53967 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 81.07933 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 40.53967 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 418 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -5 REMARK 465 GLY A -4 REMARK 465 SER A -3 REMARK 465 GLY A -2 REMARK 465 SER A 65 REMARK 465 GLY A 66 REMARK 465 ASP A 67 REMARK 465 PRO A 68 REMARK 465 ASN A 69 REMARK 465 ALA A 70 REMARK 465 LEU A 71 REMARK 465 LEU A 72 REMARK 465 LYS A 73 REMARK 465 HIS A 74 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 7 CG CD OE1 NE2 REMARK 470 GLU A 15 CG CD OE1 OE2 REMARK 470 PHE A 51 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 83 CG OD1 OD2 REMARK 470 MET A 86 CG SD CE REMARK 470 GLU A 101 CG CD OE1 OE2 REMARK 470 ARG A 196 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 139 13.01 53.59 REMARK 500 THR A 162 -61.07 65.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 450 DISTANCE = 6.22 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 41 NE2 REMARK 620 2 ASP A 108 OD2 96.8 REMARK 620 3 GLU A 119 OE2 169.4 80.0 REMARK 620 4 ILE A 120 O 101.6 94.2 88.7 REMARK 620 5 E4Z A 303 O2 89.3 96.7 81.0 163.5 REMARK 620 6 E4Z A 303 O1 97.6 162.0 83.9 93.3 72.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 302 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 80 OE2 REMARK 620 2 ASP A 108 OD1 74.2 REMARK 620 3 E4Z A 303 O2 108.6 93.1 REMARK 620 4 E4Z A 303 O3 89.5 155.6 74.8 REMARK 620 5 HOH A 405 O 169.4 99.6 80.0 99.0 REMARK 620 6 HOH A 408 O 88.1 96.9 162.4 100.5 84.1 REMARK 620 N 1 2 3 4 5 DBREF 8T5V A 1 198 UNP C3W5S0 C3W5S0_I09A0 1 198 SEQADV 8T5V MET A -5 UNP C3W5S0 INITIATING METHIONINE SEQADV 8T5V GLY A -4 UNP C3W5S0 EXPRESSION TAG SEQADV 8T5V SER A -3 UNP C3W5S0 EXPRESSION TAG SEQADV 8T5V GLY A -2 UNP C3W5S0 EXPRESSION TAG SEQADV 8T5V SER A -1 UNP C3W5S0 EXPRESSION TAG SEQADV 8T5V ALA A 0 UNP C3W5S0 EXPRESSION TAG SEQADV 8T5V VAL A 36 UNP C3W5S0 ALA 36 ENGINEERED MUTATION SEQADV 8T5V GLY A 52 UNP C3W5S0 HIS 52 CONFLICT SEQADV 8T5V A UNP C3W5S0 PHE 53 DELETION SEQADV 8T5V A UNP C3W5S0 ILE 54 DELETION SEQADV 8T5V A UNP C3W5S0 ASP 55 DELETION SEQADV 8T5V A UNP C3W5S0 GLU 56 DELETION SEQADV 8T5V A UNP C3W5S0 ARG 57 DELETION SEQADV 8T5V A UNP C3W5S0 GLY 58 DELETION SEQADV 8T5V A UNP C3W5S0 GLU 59 DELETION SEQADV 8T5V A UNP C3W5S0 SER 60 DELETION SEQADV 8T5V A UNP C3W5S0 ILE 61 DELETION SEQADV 8T5V A UNP C3W5S0 ILE 62 DELETION SEQADV 8T5V A UNP C3W5S0 VAL 63 DELETION SEQADV 8T5V A UNP C3W5S0 GLU 64 DELETION SEQRES 1 A 192 MET GLY SER GLY SER ALA MET GLU ASP PHE VAL ARG GLN SEQRES 2 A 192 CYS PHE ASN PRO MET ILE VAL GLU LEU ALA GLU LYS ALA SEQRES 3 A 192 MET LYS GLU TYR GLY GLU ASP PRO LYS ILE GLU THR ASN SEQRES 4 A 192 LYS PHE VAL ALA ILE CYS THR HIS LEU GLU VAL CYS PHE SEQRES 5 A 192 MET TYR SER ASP PHE GLY SER GLY ASP PRO ASN ALA LEU SEQRES 6 A 192 LEU LYS HIS ARG PHE GLU ILE ILE GLU GLY ARG ASP ARG SEQRES 7 A 192 ILE MET ALA TRP THR VAL VAL ASN SER ILE CYS ASN THR SEQRES 8 A 192 THR GLY VAL GLU LYS PRO LYS PHE LEU PRO ASP LEU TYR SEQRES 9 A 192 ASP TYR LYS GLU ASN ARG PHE ILE GLU ILE GLY VAL THR SEQRES 10 A 192 ARG ARG GLU VAL HIS ILE TYR TYR LEU GLU LYS ALA ASN SEQRES 11 A 192 LYS ILE LYS SER GLU LYS THR HIS ILE HIS ILE PHE SER SEQRES 12 A 192 PHE THR GLY GLU GLU MET ALA THR LYS ALA ASP TYR THR SEQRES 13 A 192 LEU ASP GLU GLU SER ARG ALA ARG ILE LYS THR ARG LEU SEQRES 14 A 192 PHE THR ILE ARG GLN GLU MET ALA SER ARG SER LEU TRP SEQRES 15 A 192 ASP SER PHE ARG GLN SER GLU ARG GLY GLU HET MN A 301 1 HET MN A 302 1 HET E4Z A 303 52 HETNAM MN MANGANESE (II) ION HETNAM E4Z BALOXAVIR ACID FORMUL 2 MN 2(MN 2+) FORMUL 4 E4Z C24 H19 F2 N3 O4 S FORMUL 5 HOH *50(H2 O) HELIX 1 AA1 SER A -1 PHE A 9 1 11 HELIX 2 AA2 ASN A 10 TYR A 24 1 15 HELIX 3 AA3 GLU A 31 PHE A 51 1 21 HELIX 4 AA4 ASP A 83 GLY A 99 1 17 HELIX 5 AA5 GLU A 126 LYS A 139 1 14 HELIX 6 AA6 LYS A 158 ASP A 160 5 3 HELIX 7 AA7 ASP A 164 ARG A 185 1 22 HELIX 8 AA8 LEU A 187 GLU A 195 1 9 SHEET 1 AA1 5 PHE A 76 ILE A 78 0 SHEET 2 AA1 5 LEU A 109 ASP A 111 -1 O TYR A 110 N GLU A 77 SHEET 3 AA1 5 ARG A 116 THR A 123 -1 O ARG A 116 N ASP A 111 SHEET 4 AA1 5 HIS A 144 SER A 149 1 O HIS A 144 N GLU A 119 SHEET 5 AA1 5 GLU A 154 ALA A 156 -1 O MET A 155 N ILE A 147 LINK NE2 HIS A 41 MN MN A 301 1555 1555 2.31 LINK OE2 GLU A 80 MN MN A 302 1555 1555 2.24 LINK OD2 ASP A 108 MN MN A 301 1555 1555 2.15 LINK OD1 ASP A 108 MN MN A 302 1555 1555 2.36 LINK OE2 GLU A 119 MN MN A 301 1555 1555 2.23 LINK O ILE A 120 MN MN A 301 1555 1555 2.17 LINK MN MN A 301 O2 E4Z A 303 1555 1555 2.49 LINK MN MN A 301 O1 E4Z A 303 1555 1555 2.03 LINK MN MN A 302 O2 E4Z A 303 1555 1555 1.99 LINK MN MN A 302 O3 E4Z A 303 1555 1555 2.41 LINK MN MN A 302 O HOH A 405 1555 1555 2.05 LINK MN MN A 302 O HOH A 408 1555 1555 2.25 CRYST1 74.724 74.724 121.619 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013383 0.007726 0.000000 0.00000 SCALE2 0.000000 0.015453 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008222 0.00000