HEADER ONCOPROTEIN 19-JUN-23 8T71 TITLE CRYSTAL STRUCTURE OF WT KRAS4A WITH BOUND GDP AND MG ION COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTPASE KRAS; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: K-RAS 2,KI-RAS,C-K-RAS,C-KI-RAS; COMPND 5 EC: 3.6.5.2; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: GTPASE KRAS; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: K-RAS 2,KI-RAS,C-K-RAS,C-KI-RAS; COMPND 11 EC: 3.6.5.2; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KRAS, KRAS2, RASK2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: KRAS, KRAS2, RASK2; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS RAS, KRAS, ONCOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.H.TRAN,M.J.WHITLEY,S.DHARMAIAH,D.K.SIMANSHU REVDAT 2 28-FEB-24 8T71 1 JRNL REVDAT 1 14-FEB-24 8T71 0 JRNL AUTH M.J.WHITLEY,T.H.TRAN,M.RIGBY,M.YI,S.DHARMAIAH,T.J.WAYBRIGHT, JRNL AUTH 2 N.RAMAKRISHNAN,S.PERKINS,T.TAYLOR,S.MESSING,D.ESPOSITO, JRNL AUTH 3 D.V.NISSLEY,F.MCCORMICK,A.G.STEPHEN,T.TURBYVILLE, JRNL AUTH 4 G.CORNILESCU,D.K.SIMANSHU JRNL TITL COMPARATIVE ANALYSIS OF KRAS4A AND KRAS4B SPLICE VARIANTS JRNL TITL 2 REVEALS DISTINCTIVE STRUCTURAL AND FUNCTIONAL PROPERTIES. JRNL REF SCI ADV V. 10 J4137 2024 JRNL REFN ESSN 2375-2548 JRNL PMID 38354232 JRNL DOI 10.1126/SCIADV.ADJ4137 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 34112 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1706 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.1300 - 4.1200 0.98 2860 151 0.1860 0.1836 REMARK 3 2 4.1200 - 3.2700 0.96 2695 142 0.1589 0.1956 REMARK 3 3 3.2700 - 2.8600 0.99 2755 145 0.1614 0.2042 REMARK 3 4 2.8500 - 2.5900 0.96 2686 141 0.1728 0.2192 REMARK 3 5 2.5900 - 2.4100 0.98 2705 143 0.1695 0.2211 REMARK 3 6 2.4100 - 2.2700 0.98 2704 142 0.1772 0.2351 REMARK 3 7 2.2700 - 2.1500 0.99 2719 143 0.1762 0.2325 REMARK 3 8 2.1500 - 2.0600 0.97 2695 142 0.1773 0.2354 REMARK 3 9 2.0600 - 1.9800 0.94 2599 137 0.1999 0.2432 REMARK 3 10 1.9800 - 1.9100 0.99 2688 141 0.2137 0.2420 REMARK 3 11 1.9100 - 1.8500 0.97 2673 140 0.2388 0.2833 REMARK 3 12 1.8500 - 1.8000 0.96 2627 139 0.2600 0.3206 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.49 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 1:23) REMARK 3 ORIGIN FOR THE GROUP (A): 41.7222 20.8743 4.2673 REMARK 3 T TENSOR REMARK 3 T11: 0.2003 T22: 0.1582 REMARK 3 T33: 0.2343 T12: 0.0268 REMARK 3 T13: -0.0155 T23: -0.0031 REMARK 3 L TENSOR REMARK 3 L11: 2.2179 L22: 2.9724 REMARK 3 L33: 4.1457 L12: 1.2956 REMARK 3 L13: -0.1374 L23: -0.0461 REMARK 3 S TENSOR REMARK 3 S11: 0.0869 S12: -0.1444 S13: 0.0903 REMARK 3 S21: 0.0726 S22: -0.0477 S23: 0.1599 REMARK 3 S31: -0.1965 S32: -0.2197 S33: -0.0563 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 24:73) REMARK 3 ORIGIN FOR THE GROUP (A): 40.3954 25.3285 3.0859 REMARK 3 T TENSOR REMARK 3 T11: 0.2986 T22: 0.2697 REMARK 3 T33: 0.4136 T12: 0.0232 REMARK 3 T13: -0.0083 T23: -0.0231 REMARK 3 L TENSOR REMARK 3 L11: 2.2147 L22: 4.4382 REMARK 3 L33: 2.7018 L12: 1.1923 REMARK 3 L13: -0.3700 L23: 0.1040 REMARK 3 S TENSOR REMARK 3 S11: 0.0803 S12: 0.0552 S13: 0.3221 REMARK 3 S21: -0.0461 S22: -0.0714 S23: 0.0137 REMARK 3 S31: -0.3666 S32: 0.1102 S33: -0.0581 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 74:107) REMARK 3 ORIGIN FOR THE GROUP (A): 54.4344 21.7637 10.3781 REMARK 3 T TENSOR REMARK 3 T11: 0.2374 T22: 0.2652 REMARK 3 T33: 0.2297 T12: -0.0349 REMARK 3 T13: 0.0055 T23: -0.0500 REMARK 3 L TENSOR REMARK 3 L11: 2.2795 L22: 1.4432 REMARK 3 L33: 5.6500 L12: -0.1805 REMARK 3 L13: -0.6520 L23: 1.9787 REMARK 3 S TENSOR REMARK 3 S11: 0.1788 S12: -0.2412 S13: 0.1708 REMARK 3 S21: -0.0166 S22: 0.1520 S23: -0.1168 REMARK 3 S31: -0.2643 S32: 0.5848 S33: -0.3484 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 108:146) REMARK 3 ORIGIN FOR THE GROUP (A): 54.4509 11.5189 4.4196 REMARK 3 T TENSOR REMARK 3 T11: 0.2248 T22: 0.2928 REMARK 3 T33: 0.2191 T12: 0.0581 REMARK 3 T13: -0.0190 T23: -0.0169 REMARK 3 L TENSOR REMARK 3 L11: 1.4122 L22: 1.2810 REMARK 3 L33: 4.4042 L12: 0.3134 REMARK 3 L13: -0.6069 L23: 0.6654 REMARK 3 S TENSOR REMARK 3 S11: 0.0314 S12: -0.2004 S13: -0.1394 REMARK 3 S21: 0.0763 S22: 0.1695 S23: -0.1586 REMARK 3 S31: 0.4536 S32: 0.8158 S33: -0.1258 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 147:171) REMARK 3 ORIGIN FOR THE GROUP (A): 41.1517 11.7712 9.9140 REMARK 3 T TENSOR REMARK 3 T11: 0.2533 T22: 0.1974 REMARK 3 T33: 0.3041 T12: 0.0009 REMARK 3 T13: -0.0149 T23: 0.0156 REMARK 3 L TENSOR REMARK 3 L11: 3.4624 L22: 2.6243 REMARK 3 L33: 8.2047 L12: -0.4002 REMARK 3 L13: -3.5788 L23: 0.4373 REMARK 3 S TENSOR REMARK 3 S11: -0.2475 S12: -0.2219 S13: -0.0695 REMARK 3 S21: 0.1164 S22: -0.0551 S23: 0.3107 REMARK 3 S31: 0.2089 S32: 0.0239 S33: 0.2915 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 1:34) REMARK 3 ORIGIN FOR THE GROUP (A): 7.9765 13.1382 33.2340 REMARK 3 T TENSOR REMARK 3 T11: 0.2861 T22: 0.1811 REMARK 3 T33: 0.1895 T12: 0.0124 REMARK 3 T13: -0.0036 T23: 0.0176 REMARK 3 L TENSOR REMARK 3 L11: 0.5070 L22: 5.2525 REMARK 3 L33: 3.8172 L12: -0.3849 REMARK 3 L13: 0.5270 L23: -2.2324 REMARK 3 S TENSOR REMARK 3 S11: -0.0310 S12: -0.1918 S13: -0.2963 REMARK 3 S21: 0.2157 S22: 0.3043 S23: 0.3186 REMARK 3 S31: 0.2559 S32: -0.2667 S33: -0.2939 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN B AND RESID 35:73) REMARK 3 ORIGIN FOR THE GROUP (A): 13.3364 19.5115 34.1198 REMARK 3 T TENSOR REMARK 3 T11: 0.3942 T22: 0.2788 REMARK 3 T33: 0.2281 T12: -0.0057 REMARK 3 T13: -0.0064 T23: -0.0272 REMARK 3 L TENSOR REMARK 3 L11: 1.8364 L22: 6.2522 REMARK 3 L33: 1.8323 L12: -1.4288 REMARK 3 L13: -0.6033 L23: 1.0943 REMARK 3 S TENSOR REMARK 3 S11: 0.0730 S12: -0.0112 S13: -0.0429 REMARK 3 S21: -0.0204 S22: -0.0112 S23: 0.0067 REMARK 3 S31: -0.1117 S32: -0.0642 S33: -0.1158 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN B AND RESID 74:125) REMARK 3 ORIGIN FOR THE GROUP (A): 10.2710 22.8323 20.3724 REMARK 3 T TENSOR REMARK 3 T11: 0.2550 T22: 0.1696 REMARK 3 T33: 0.1433 T12: -0.0008 REMARK 3 T13: 0.0411 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 4.2146 L22: 3.8520 REMARK 3 L33: 2.2578 L12: 1.0311 REMARK 3 L13: 1.3348 L23: 0.6676 REMARK 3 S TENSOR REMARK 3 S11: -0.0335 S12: 0.0861 S13: 0.1795 REMARK 3 S21: -0.0551 S22: 0.0644 S23: -0.0225 REMARK 3 S31: -0.1051 S32: 0.0042 S33: -0.0077 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN B AND RESID 126:148) REMARK 3 ORIGIN FOR THE GROUP (A): 9.9259 16.1935 13.5397 REMARK 3 T TENSOR REMARK 3 T11: 0.3073 T22: 0.1717 REMARK 3 T33: 0.1993 T12: 0.0203 REMARK 3 T13: 0.0188 T23: -0.0159 REMARK 3 L TENSOR REMARK 3 L11: 6.4455 L22: 6.5038 REMARK 3 L33: 3.5770 L12: 1.8261 REMARK 3 L13: 0.3030 L23: -2.0067 REMARK 3 S TENSOR REMARK 3 S11: -0.0368 S12: 0.4922 S13: 0.1377 REMARK 3 S21: -0.7399 S22: 0.0824 S23: -0.0094 REMARK 3 S31: 0.3224 S32: 0.0453 S33: -0.0631 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN B AND RESID 149:171) REMARK 3 ORIGIN FOR THE GROUP (A): 18.9689 10.9591 24.0522 REMARK 3 T TENSOR REMARK 3 T11: 0.3605 T22: 0.2263 REMARK 3 T33: 0.3146 T12: 0.0273 REMARK 3 T13: -0.0219 T23: -0.0167 REMARK 3 L TENSOR REMARK 3 L11: 8.4098 L22: 5.4157 REMARK 3 L33: 3.8739 L12: 2.7887 REMARK 3 L13: 3.4696 L23: 2.3022 REMARK 3 S TENSOR REMARK 3 S11: 0.3793 S12: 0.1063 S13: -0.9293 REMARK 3 S21: 0.0633 S22: 0.0844 S23: -0.4918 REMARK 3 S31: 0.2421 S32: 0.2659 S33: -0.4072 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8T71 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JUN-23. REMARK 100 THE DEPOSITION ID IS D_1000275213. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-OCT-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34137 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 46.130 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.11100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.5700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.91 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.66900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM IODIDE, 2.2 M AMMONIUM REMARK 280 SULFATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 66.44650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 17.26700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 66.44650 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 17.26700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 SER A 172 REMARK 465 LYS A 173 REMARK 465 GLU A 174 REMARK 465 GLU A 175 REMARK 465 LYS A 176 REMARK 465 THR A 177 REMARK 465 GLY B 0 REMARK 465 VAL B 29 REMARK 465 ASP B 30 REMARK 465 ILE B 171 REMARK 465 SER B 172 REMARK 465 LYS B 173 REMARK 465 GLU B 174 REMARK 465 GLU B 175 REMARK 465 LYS B 176 REMARK 465 THR B 177 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 35 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ3 LYS A 88 OD1 ASP A 92 1.46 REMARK 500 HZ2 LYS A 101 OE1 GLU A 107 1.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 H HIS B 27 HG SER B 39 4546 1.29 REMARK 500 HE22 GLN A 150 OG SER B 136 4545 1.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 105 55.55 38.66 REMARK 500 LYS A 117 35.26 72.86 REMARK 500 SER A 122 47.61 -82.81 REMARK 500 LYS B 117 38.62 73.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 17 OG REMARK 620 2 GDP A 201 O3B 90.9 REMARK 620 3 HOH A 304 O 170.9 94.3 REMARK 620 4 HOH A 306 O 89.7 85.7 98.1 REMARK 620 5 HOH A 311 O 86.5 93.7 85.8 176.1 REMARK 620 6 HOH A 356 O 86.5 176.3 87.9 96.8 83.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 17 OG REMARK 620 2 GDP B 201 O3B 81.4 REMARK 620 3 HOH B 308 O 87.3 95.6 REMARK 620 4 HOH B 309 O 78.9 85.6 165.9 REMARK 620 5 HOH B 366 O 95.5 163.2 100.8 77.6 REMARK 620 N 1 2 3 4 DBREF 8T71 A 1 177 UNP P01116 RASK_HUMAN 1 177 DBREF 8T71 B 1 177 UNP P01116 RASK_HUMAN 1 177 SEQADV 8T71 GLY A 0 UNP P01116 EXPRESSION TAG SEQADV 8T71 GLY B 0 UNP P01116 EXPRESSION TAG SEQRES 1 A 178 GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA GLY SEQRES 2 A 178 GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN SEQRES 3 A 178 ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SEQRES 4 A 178 SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CYS SEQRES 5 A 178 LEU LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SEQRES 6 A 178 SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY SEQRES 7 A 178 PHE LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE SEQRES 8 A 178 GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS ARG VAL SEQRES 9 A 178 LYS ASP SER GLU ASP VAL PRO MET VAL LEU VAL GLY ASN SEQRES 10 A 178 LYS CYS ASP LEU PRO SER ARG THR VAL ASP THR LYS GLN SEQRES 11 A 178 ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO PHE ILE SEQRES 12 A 178 GLU THR SER ALA LYS THR ARG GLN ARG VAL GLU ASP ALA SEQRES 13 A 178 PHE TYR THR LEU VAL ARG GLU ILE ARG GLN TYR ARG LEU SEQRES 14 A 178 LYS LYS ILE SER LYS GLU GLU LYS THR SEQRES 1 B 178 GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA GLY SEQRES 2 B 178 GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN SEQRES 3 B 178 ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SEQRES 4 B 178 SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CYS SEQRES 5 B 178 LEU LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SEQRES 6 B 178 SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY SEQRES 7 B 178 PHE LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE SEQRES 8 B 178 GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS ARG VAL SEQRES 9 B 178 LYS ASP SER GLU ASP VAL PRO MET VAL LEU VAL GLY ASN SEQRES 10 B 178 LYS CSD ASP LEU PRO SER ARG THR VAL ASP THR LYS GLN SEQRES 11 B 178 ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO PHE ILE SEQRES 12 B 178 GLU THR SER ALA LYS THR ARG GLN ARG VAL GLU ASP ALA SEQRES 13 B 178 PHE TYR THR LEU VAL ARG GLU ILE ARG GLN TYR ARG LEU SEQRES 14 B 178 LYS LYS ILE SER LYS GLU GLU LYS THR MODRES 8T71 CSD B 118 CYS MODIFIED RESIDUE HET CSD B 118 8 HET GDP A 201 40 HET MG A 202 1 HET GDP B 201 40 HET MG B 202 1 HETNAM CSD 3-SULFINOALANINE HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION HETSYN CSD S-CYSTEINESULFINIC ACID; S-SULFINOCYSTEINE FORMUL 2 CSD C3 H7 N O4 S FORMUL 3 GDP 2(C10 H15 N5 O11 P2) FORMUL 4 MG 2(MG 2+) FORMUL 7 HOH *147(H2 O) HELIX 1 AA1 GLY A 15 ASN A 26 1 12 HELIX 2 AA2 SER A 65 GLY A 75 1 11 HELIX 3 AA3 ASN A 86 ASP A 92 1 7 HELIX 4 AA4 ASP A 92 ASP A 105 1 14 HELIX 5 AA5 ASP A 126 GLY A 138 1 13 HELIX 6 AA6 ARG A 151 ILE A 171 1 21 HELIX 7 AA7 GLY B 15 GLN B 25 1 11 HELIX 8 AA8 MET B 67 GLY B 75 1 9 HELIX 9 AA9 ASN B 86 ASP B 92 1 7 HELIX 10 AB1 ASP B 92 ASP B 105 1 14 HELIX 11 AB2 ASP B 126 GLY B 138 1 13 HELIX 12 AB3 ARG B 151 LYS B 170 1 20 SHEET 1 AA1 6 ASP A 38 ILE A 46 0 SHEET 2 AA1 6 GLU A 49 ASP A 57 -1 O CYS A 51 N VAL A 44 SHEET 3 AA1 6 THR A 2 GLY A 10 1 N THR A 2 O LEU A 52 SHEET 4 AA1 6 GLY A 77 ALA A 83 1 O LEU A 79 N VAL A 9 SHEET 5 AA1 6 MET A 111 ASN A 116 1 O ASN A 116 N PHE A 82 SHEET 6 AA1 6 PHE A 141 GLU A 143 1 O ILE A 142 N LEU A 113 SHEET 1 AA2 6 ASP B 38 ILE B 46 0 SHEET 2 AA2 6 GLU B 49 ASP B 57 -1 O ILE B 55 N TYR B 40 SHEET 3 AA2 6 THR B 2 VAL B 9 1 N THR B 2 O LEU B 52 SHEET 4 AA2 6 GLY B 77 ALA B 83 1 O VAL B 81 N VAL B 9 SHEET 5 AA2 6 MET B 111 ASN B 116 1 O ASN B 116 N PHE B 82 SHEET 6 AA2 6 PHE B 141 GLU B 143 1 O ILE B 142 N GLY B 115 LINK C LYS B 117 N CSD B 118 1555 1555 1.33 LINK C CSD B 118 N ASP B 119 1555 1555 1.33 LINK OG SER A 17 MG MG A 202 1555 1555 2.13 LINK O3B GDP A 201 MG MG A 202 1555 1555 1.93 LINK MG MG A 202 O HOH A 304 1555 1555 2.34 LINK MG MG A 202 O HOH A 306 1555 1555 1.99 LINK MG MG A 202 O HOH A 311 1555 1555 2.13 LINK MG MG A 202 O HOH A 356 1555 1555 2.18 LINK OG SER B 17 MG MG B 202 1555 1555 2.31 LINK O3B GDP B 201 MG MG B 202 1555 1555 2.35 LINK MG MG B 202 O HOH B 308 1555 1555 2.50 LINK MG MG B 202 O HOH B 309 1555 1555 2.38 LINK MG MG B 202 O HOH B 366 1555 1555 2.23 CRYST1 132.893 34.534 94.838 90.00 120.60 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007525 0.000000 0.004450 0.00000 SCALE2 0.000000 0.028957 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012250 0.00000