HEADER IMMUNE SYSTEM 20-JUN-23 8T79 TITLE SPRY-CAS9:GRNA COMPLEX BOUND TO NON-TARGET DNA WITH 10 BP R-LOOP COMPND MOL_ID: 1; COMPND 2 MOLECULE: CRISPR-ASSOCIATED ENDONUCLEASE CAS9/CSN1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SPCAS9,SPYCAS9; COMPND 5 EC: 3.1.-.-; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: GRNA; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: TS; COMPND 14 CHAIN: C; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: NTS; COMPND 18 CHAIN: D; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PYOGENES; SOURCE 3 ORGANISM_TAXID: 1314; SOURCE 4 GENE: CAS9, CSN1, SPY_1046; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PYOGENES; SOURCE 10 ORGANISM_TAXID: 1314; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: ESCHERICHIA PHAGE LAMBDA; SOURCE 14 ORGANISM_TAXID: 2681611; SOURCE 15 MOL_ID: 4; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: ESCHERICHIA PHAGE LAMBDA; SOURCE 18 ORGANISM_TAXID: 2681611 KEYWDS SPRY-CAS9, CRISPR, CAS9, IMMUNE SYSTEM, R-LOOP EXPDTA ELECTRON MICROSCOPY AUTHOR G.N.HIBSHMAN,J.P.K.BRAVO,D.W.TAYLOR REVDAT 1 08-MAY-24 8T79 0 JRNL AUTH G.N.HIBSHMAN,J.P.K.BRAVO,M.M.HOOPER,T.L.DANGERFIELD,H.ZHANG, JRNL AUTH 2 I.J.FINKELSTEIN,K.A.JOHNSON,D.W.TAYLOR JRNL TITL UNRAVELING THE MECHANISMS OF PAMLESS DNA INTERROGATION BY JRNL TITL 2 SPRY-CAS9. JRNL REF NAT COMMUN V. 15 3663 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 38688943 JRNL DOI 10.1038/S41467-024-47830-3 REMARK 2 REMARK 2 RESOLUTION. 3.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.040 REMARK 3 NUMBER OF PARTICLES : 123454 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8T79 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-JUN-23. REMARK 100 THE DEPOSITION ID IS D_1000275415. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : TERNARY COMPLEX OF SPRY-CAS9 REMARK 245 WITH GRNA AND NON-TARGET DNA REMARK 245 WITH 10 BP R-LOOP REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 8000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 283 REMARK 465 ASP A 284 REMARK 465 GLN A 285 REMARK 465 TYR A 286 REMARK 465 ALA A 287 REMARK 465 ILE A 572 REMARK 465 GLU A 573 REMARK 465 CYS A 574 REMARK 465 PHE A 575 REMARK 465 ASP A 576 REMARK 465 SER A 577 REMARK 465 VAL A 578 REMARK 465 GLU A 579 REMARK 465 ILE A 580 REMARK 465 SER A 581 REMARK 465 GLY A 582 REMARK 465 VAL A 583 REMARK 465 GLU A 584 REMARK 465 ASP A 585 REMARK 465 ARG A 586 REMARK 465 PHE A 587 REMARK 465 ASN A 588 REMARK 465 ALA A 589 REMARK 465 VAL A 713 REMARK 465 SER A 714 REMARK 465 GLY A 715 REMARK 465 GLN A 716 REMARK 465 GLY A 717 REMARK 465 ASN A 767 REMARK 465 GLN A 768 REMARK 465 THR A 769 REMARK 465 THR A 770 REMARK 465 GLN A 771 REMARK 465 LYS A 772 REMARK 465 GLY A 773 REMARK 465 GLN A 774 REMARK 465 LYS A 775 REMARK 465 ASN A 776 REMARK 465 SER A 777 REMARK 465 ARG A 778 REMARK 465 GLU A 779 REMARK 465 ARG A 780 REMARK 465 MET A 781 REMARK 465 LYS A 782 REMARK 465 ARG A 783 REMARK 465 ILE A 784 REMARK 465 GLU A 785 REMARK 465 GLU A 786 REMARK 465 GLY A 787 REMARK 465 ILE A 788 REMARK 465 LYS A 789 REMARK 465 GLU A 790 REMARK 465 LEU A 791 REMARK 465 GLY A 792 REMARK 465 SER A 793 REMARK 465 GLN A 794 REMARK 465 ILE A 795 REMARK 465 LEU A 796 REMARK 465 LYS A 797 REMARK 465 GLU A 798 REMARK 465 HIS A 799 REMARK 465 PRO A 800 REMARK 465 VAL A 801 REMARK 465 GLU A 802 REMARK 465 ASN A 803 REMARK 465 THR A 804 REMARK 465 GLN A 805 REMARK 465 LEU A 806 REMARK 465 GLN A 807 REMARK 465 ASN A 808 REMARK 465 GLU A 809 REMARK 465 LYS A 810 REMARK 465 LEU A 811 REMARK 465 TYR A 812 REMARK 465 LEU A 813 REMARK 465 TYR A 814 REMARK 465 TYR A 815 REMARK 465 LEU A 816 REMARK 465 GLN A 817 REMARK 465 ASN A 818 REMARK 465 GLY A 819 REMARK 465 ARG A 820 REMARK 465 ASP A 821 REMARK 465 MET A 822 REMARK 465 TYR A 823 REMARK 465 VAL A 824 REMARK 465 ASP A 825 REMARK 465 GLN A 826 REMARK 465 GLU A 827 REMARK 465 LEU A 828 REMARK 465 ASP A 829 REMARK 465 ILE A 830 REMARK 465 ASN A 831 REMARK 465 ARG A 832 REMARK 465 LEU A 833 REMARK 465 SER A 834 REMARK 465 ASP A 835 REMARK 465 TYR A 836 REMARK 465 ASP A 837 REMARK 465 VAL A 838 REMARK 465 ASP A 839 REMARK 465 HIS A 840 REMARK 465 ILE A 841 REMARK 465 VAL A 842 REMARK 465 PRO A 843 REMARK 465 GLN A 844 REMARK 465 SER A 845 REMARK 465 PHE A 846 REMARK 465 LEU A 847 REMARK 465 LYS A 848 REMARK 465 ASP A 849 REMARK 465 ASP A 850 REMARK 465 SER A 851 REMARK 465 ILE A 852 REMARK 465 ASP A 853 REMARK 465 ASN A 854 REMARK 465 LYS A 855 REMARK 465 VAL A 856 REMARK 465 LEU A 857 REMARK 465 THR A 858 REMARK 465 ARG A 859 REMARK 465 SER A 860 REMARK 465 ASP A 861 REMARK 465 LYS A 862 REMARK 465 ASN A 863 REMARK 465 ARG A 864 REMARK 465 GLY A 865 REMARK 465 LYS A 866 REMARK 465 SER A 867 REMARK 465 ASP A 868 REMARK 465 ASN A 869 REMARK 465 VAL A 870 REMARK 465 PRO A 871 REMARK 465 SER A 872 REMARK 465 GLU A 873 REMARK 465 GLU A 874 REMARK 465 VAL A 875 REMARK 465 VAL A 876 REMARK 465 LYS A 877 REMARK 465 LYS A 878 REMARK 465 MET A 879 REMARK 465 LYS A 880 REMARK 465 ASN A 881 REMARK 465 TYR A 882 REMARK 465 TRP A 883 REMARK 465 ARG A 884 REMARK 465 GLN A 885 REMARK 465 LEU A 886 REMARK 465 LEU A 887 REMARK 465 ASN A 888 REMARK 465 ALA A 889 REMARK 465 LYS A 890 REMARK 465 LEU A 891 REMARK 465 ILE A 892 REMARK 465 THR A 893 REMARK 465 GLN A 894 REMARK 465 ARG A 895 REMARK 465 LYS A 896 REMARK 465 PHE A 897 REMARK 465 ASP A 898 REMARK 465 ASN A 899 REMARK 465 LEU A 900 REMARK 465 THR A 901 REMARK 465 LYS A 902 REMARK 465 ALA A 903 REMARK 465 GLU A 904 REMARK 465 ARG A 905 REMARK 465 GLY A 906 REMARK 465 GLY A 907 REMARK 465 LEU A 908 REMARK 465 SER A 909 REMARK 465 GLU A 910 REMARK 465 LEU A 911 REMARK 465 ASP A 912 REMARK 465 LYS A 913 REMARK 465 ALA A 914 REMARK 465 GLY A 915 REMARK 465 PHE A 916 REMARK 465 ILE A 917 REMARK 465 TYR A 1016 REMARK 465 ASP A 1017 REMARK 465 VAL A 1018 REMARK 465 ARG A 1019 REMARK 465 LYS A 1020 REMARK 465 MET A 1021 REMARK 465 ILE A 1022 REMARK 465 ALA A 1023 REMARK 465 LYS A 1024 REMARK 465 SER A 1025 REMARK 465 GLU A 1026 REMARK 465 GLN A 1027 REMARK 465 GLU A 1028 REMARK 465 ILE A 1029 REMARK 465 GLY A 1030 REMARK 465 LYS A 1031 REMARK 465 ALA A 1032 REMARK 465 THR A 1033 REMARK 465 ALA A 1034 REMARK 465 LYS A 1035 REMARK 465 TYR A 1036 REMARK 465 PHE A 1037 REMARK 465 PHE A 1038 REMARK 465 TYR A 1039 REMARK 465 SER A 1040 REMARK 465 ASN A 1041 REMARK 465 THR A 1048 REMARK 465 GLU A 1049 REMARK 465 ILE A 1050 REMARK 465 THR A 1051 REMARK 465 LEU A 1052 REMARK 465 ALA A 1053 REMARK 465 ASN A 1054 REMARK 465 GLY A 1055 REMARK 465 GLU A 1056 REMARK 465 ILE A 1057 REMARK 465 ARG A 1058 REMARK 465 LYS A 1059 REMARK 465 ARG A 1060 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 273 CB - CG - OD1 ANGL. DEV. = 6.6 DEGREES REMARK 500 ASP A 406 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 499 CB - CG - OD1 ANGL. DEV. = 6.9 DEGREES REMARK 500 ASP A 596 CB - CG - OD2 ANGL. DEV. = 7.7 DEGREES REMARK 500 LEU A 597 CA - CB - CG ANGL. DEV. = 15.4 DEGREES REMARK 500 LEU A 636 CA - CB - CG ANGL. DEV. = 14.4 DEGREES REMARK 500 LEU A 651 CA - CB - CG ANGL. DEV. = 18.9 DEGREES REMARK 500 LEU A 666 CA - CB - CG ANGL. DEV. = 14.2 DEGREES REMARK 500 LEU A 680 CA - CB - CG ANGL. DEV. = 14.6 DEGREES REMARK 500 ASP A 700 CB - CG - OD1 ANGL. DEV. = 6.8 DEGREES REMARK 500 ASP A 745 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 C B 96 C2 - N1 - C1' ANGL. DEV. = 7.3 DEGREES REMARK 500 DT C 14 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DT C 23 OP1 - P - OP2 ANGL. DEV. = -9.7 DEGREES REMARK 500 DC C 28 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 91 0.56 -68.48 REMARK 500 PHE A 164 77.44 -101.61 REMARK 500 ASP A 173 50.55 -117.39 REMARK 500 PRO A 176 48.62 -88.13 REMARK 500 ASN A 199 78.69 56.02 REMARK 500 ASP A 207 -127.82 54.37 REMARK 500 ASP A 257 47.38 -86.35 REMARK 500 LYS A 268 -166.28 -161.23 REMARK 500 GLN A 354 30.64 -97.15 REMARK 500 PRO A 503 47.35 -84.62 REMARK 500 ILE A 600 -63.07 -102.58 REMARK 500 ASN A 668 -31.45 -131.00 REMARK 500 ALA A 764 51.64 -90.62 REMARK 500 LEU A1004 30.07 -95.54 REMARK 500 ASN A1115 58.17 -91.01 REMARK 500 PRO A1128 43.35 -80.44 REMARK 500 LEU A1206 -167.67 -120.44 REMARK 500 LEU A1245 -42.68 -130.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PHE A 238 GLY A 239 145.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 655 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-41088 RELATED DB: EMDB REMARK 900 SPRY-CAS9:GRNA COMPLEX BOUND TO NON-TARGET DNA WITH 10 BP R-LOOP DBREF 8T79 A 3 1366 UNP Q99ZW2 CAS9_STRP1 3 1366 DBREF 8T79 B 10 98 PDB 8T79 8T79 10 98 DBREF 8T79 C 10 29 PDB 8T79 8T79 10 29 DBREF 8T79 D 38 46 PDB 8T79 8T79 38 46 SEQADV 8T79 ARG A 61 UNP Q99ZW2 ALA 61 ENGINEERED MUTATION SEQADV 8T79 ARG A 1111 UNP Q99ZW2 LEU 1111 ENGINEERED MUTATION SEQADV 8T79 LEU A 1135 UNP Q99ZW2 ASP 1135 ENGINEERED MUTATION SEQADV 8T79 TRP A 1136 UNP Q99ZW2 SER 1136 ENGINEERED MUTATION SEQADV 8T79 LYS A 1218 UNP Q99ZW2 GLY 1218 ENGINEERED MUTATION SEQADV 8T79 GLN A 1219 UNP Q99ZW2 GLU 1219 ENGINEERED MUTATION SEQADV 8T79 ARG A 1317 UNP Q99ZW2 ASN 1317 ENGINEERED MUTATION SEQADV 8T79 ARG A 1322 UNP Q99ZW2 ALA 1322 ENGINEERED MUTATION SEQADV 8T79 PRO A 1333 UNP Q99ZW2 ARG 1333 ENGINEERED MUTATION SEQADV 8T79 GLN A 1335 UNP Q99ZW2 ARG 1335 ENGINEERED MUTATION SEQADV 8T79 ARG A 1337 UNP Q99ZW2 THR 1337 ENGINEERED MUTATION SEQRES 1 A 1364 LYS LYS TYR SER ILE GLY LEU ASP ILE GLY THR ASN SER SEQRES 2 A 1364 VAL GLY TRP ALA VAL ILE THR ASP GLU TYR LYS VAL PRO SEQRES 3 A 1364 SER LYS LYS PHE LYS VAL LEU GLY ASN THR ASP ARG HIS SEQRES 4 A 1364 SER ILE LYS LYS ASN LEU ILE GLY ALA LEU LEU PHE ASP SEQRES 5 A 1364 SER GLY GLU THR ALA GLU ARG THR ARG LEU LYS ARG THR SEQRES 6 A 1364 ALA ARG ARG ARG TYR THR ARG ARG LYS ASN ARG ILE CYS SEQRES 7 A 1364 TYR LEU GLN GLU ILE PHE SER ASN GLU MET ALA LYS VAL SEQRES 8 A 1364 ASP ASP SER PHE PHE HIS ARG LEU GLU GLU SER PHE LEU SEQRES 9 A 1364 VAL GLU GLU ASP LYS LYS HIS GLU ARG HIS PRO ILE PHE SEQRES 10 A 1364 GLY ASN ILE VAL ASP GLU VAL ALA TYR HIS GLU LYS TYR SEQRES 11 A 1364 PRO THR ILE TYR HIS LEU ARG LYS LYS LEU VAL ASP SER SEQRES 12 A 1364 THR ASP LYS ALA ASP LEU ARG LEU ILE TYR LEU ALA LEU SEQRES 13 A 1364 ALA HIS MET ILE LYS PHE ARG GLY HIS PHE LEU ILE GLU SEQRES 14 A 1364 GLY ASP LEU ASN PRO ASP ASN SER ASP VAL ASP LYS LEU SEQRES 15 A 1364 PHE ILE GLN LEU VAL GLN THR TYR ASN GLN LEU PHE GLU SEQRES 16 A 1364 GLU ASN PRO ILE ASN ALA SER GLY VAL ASP ALA LYS ALA SEQRES 17 A 1364 ILE LEU SER ALA ARG LEU SER LYS SER ARG ARG LEU GLU SEQRES 18 A 1364 ASN LEU ILE ALA GLN LEU PRO GLY GLU LYS LYS ASN GLY SEQRES 19 A 1364 LEU PHE GLY ASN LEU ILE ALA LEU SER LEU GLY LEU THR SEQRES 20 A 1364 PRO ASN PHE LYS SER ASN PHE ASP LEU ALA GLU ASP ALA SEQRES 21 A 1364 LYS LEU GLN LEU SER LYS ASP THR TYR ASP ASP ASP LEU SEQRES 22 A 1364 ASP ASN LEU LEU ALA GLN ILE GLY ASP GLN TYR ALA ASP SEQRES 23 A 1364 LEU PHE LEU ALA ALA LYS ASN LEU SER ASP ALA ILE LEU SEQRES 24 A 1364 LEU SER ASP ILE LEU ARG VAL ASN THR GLU ILE THR LYS SEQRES 25 A 1364 ALA PRO LEU SER ALA SER MET ILE LYS ARG TYR ASP GLU SEQRES 26 A 1364 HIS HIS GLN ASP LEU THR LEU LEU LYS ALA LEU VAL ARG SEQRES 27 A 1364 GLN GLN LEU PRO GLU LYS TYR LYS GLU ILE PHE PHE ASP SEQRES 28 A 1364 GLN SER LYS ASN GLY TYR ALA GLY TYR ILE ASP GLY GLY SEQRES 29 A 1364 ALA SER GLN GLU GLU PHE TYR LYS PHE ILE LYS PRO ILE SEQRES 30 A 1364 LEU GLU LYS MET ASP GLY THR GLU GLU LEU LEU VAL LYS SEQRES 31 A 1364 LEU ASN ARG GLU ASP LEU LEU ARG LYS GLN ARG THR PHE SEQRES 32 A 1364 ASP ASN GLY SER ILE PRO HIS GLN ILE HIS LEU GLY GLU SEQRES 33 A 1364 LEU HIS ALA ILE LEU ARG ARG GLN GLU ASP PHE TYR PRO SEQRES 34 A 1364 PHE LEU LYS ASP ASN ARG GLU LYS ILE GLU LYS ILE LEU SEQRES 35 A 1364 THR PHE ARG ILE PRO TYR TYR VAL GLY PRO LEU ALA ARG SEQRES 36 A 1364 GLY ASN SER ARG PHE ALA TRP MET THR ARG LYS SER GLU SEQRES 37 A 1364 GLU THR ILE THR PRO TRP ASN PHE GLU GLU VAL VAL ASP SEQRES 38 A 1364 LYS GLY ALA SER ALA GLN SER PHE ILE GLU ARG MET THR SEQRES 39 A 1364 ASN PHE ASP LYS ASN LEU PRO ASN GLU LYS VAL LEU PRO SEQRES 40 A 1364 LYS HIS SER LEU LEU TYR GLU TYR PHE THR VAL TYR ASN SEQRES 41 A 1364 GLU LEU THR LYS VAL LYS TYR VAL THR GLU GLY MET ARG SEQRES 42 A 1364 LYS PRO ALA PHE LEU SER GLY GLU GLN LYS LYS ALA ILE SEQRES 43 A 1364 VAL ASP LEU LEU PHE LYS THR ASN ARG LYS VAL THR VAL SEQRES 44 A 1364 LYS GLN LEU LYS GLU ASP TYR PHE LYS LYS ILE GLU CYS SEQRES 45 A 1364 PHE ASP SER VAL GLU ILE SER GLY VAL GLU ASP ARG PHE SEQRES 46 A 1364 ASN ALA SER LEU GLY THR TYR HIS ASP LEU LEU LYS ILE SEQRES 47 A 1364 ILE LYS ASP LYS ASP PHE LEU ASP ASN GLU GLU ASN GLU SEQRES 48 A 1364 ASP ILE LEU GLU ASP ILE VAL LEU THR LEU THR LEU PHE SEQRES 49 A 1364 GLU ASP ARG GLU MET ILE GLU GLU ARG LEU LYS THR TYR SEQRES 50 A 1364 ALA HIS LEU PHE ASP ASP LYS VAL MET LYS GLN LEU LYS SEQRES 51 A 1364 ARG ARG ARG TYR THR GLY TRP GLY ARG LEU SER ARG LYS SEQRES 52 A 1364 LEU ILE ASN GLY ILE ARG ASP LYS GLN SER GLY LYS THR SEQRES 53 A 1364 ILE LEU ASP PHE LEU LYS SER ASP GLY PHE ALA ASN ARG SEQRES 54 A 1364 ASN PHE MET GLN LEU ILE HIS ASP ASP SER LEU THR PHE SEQRES 55 A 1364 LYS GLU ASP ILE GLN LYS ALA GLN VAL SER GLY GLN GLY SEQRES 56 A 1364 ASP SER LEU HIS GLU HIS ILE ALA ASN LEU ALA GLY SER SEQRES 57 A 1364 PRO ALA ILE LYS LYS GLY ILE LEU GLN THR VAL LYS VAL SEQRES 58 A 1364 VAL ASP GLU LEU VAL LYS VAL MET GLY ARG HIS LYS PRO SEQRES 59 A 1364 GLU ASN ILE VAL ILE GLU MET ALA ARG GLU ASN GLN THR SEQRES 60 A 1364 THR GLN LYS GLY GLN LYS ASN SER ARG GLU ARG MET LYS SEQRES 61 A 1364 ARG ILE GLU GLU GLY ILE LYS GLU LEU GLY SER GLN ILE SEQRES 62 A 1364 LEU LYS GLU HIS PRO VAL GLU ASN THR GLN LEU GLN ASN SEQRES 63 A 1364 GLU LYS LEU TYR LEU TYR TYR LEU GLN ASN GLY ARG ASP SEQRES 64 A 1364 MET TYR VAL ASP GLN GLU LEU ASP ILE ASN ARG LEU SER SEQRES 65 A 1364 ASP TYR ASP VAL ASP HIS ILE VAL PRO GLN SER PHE LEU SEQRES 66 A 1364 LYS ASP ASP SER ILE ASP ASN LYS VAL LEU THR ARG SER SEQRES 67 A 1364 ASP LYS ASN ARG GLY LYS SER ASP ASN VAL PRO SER GLU SEQRES 68 A 1364 GLU VAL VAL LYS LYS MET LYS ASN TYR TRP ARG GLN LEU SEQRES 69 A 1364 LEU ASN ALA LYS LEU ILE THR GLN ARG LYS PHE ASP ASN SEQRES 70 A 1364 LEU THR LYS ALA GLU ARG GLY GLY LEU SER GLU LEU ASP SEQRES 71 A 1364 LYS ALA GLY PHE ILE LYS ARG GLN LEU VAL GLU THR ARG SEQRES 72 A 1364 GLN ILE THR LYS HIS VAL ALA GLN ILE LEU ASP SER ARG SEQRES 73 A 1364 MET ASN THR LYS TYR ASP GLU ASN ASP LYS LEU ILE ARG SEQRES 74 A 1364 GLU VAL LYS VAL ILE THR LEU LYS SER LYS LEU VAL SER SEQRES 75 A 1364 ASP PHE ARG LYS ASP PHE GLN PHE TYR LYS VAL ARG GLU SEQRES 76 A 1364 ILE ASN ASN TYR HIS HIS ALA HIS ASP ALA TYR LEU ASN SEQRES 77 A 1364 ALA VAL VAL GLY THR ALA LEU ILE LYS LYS TYR PRO LYS SEQRES 78 A 1364 LEU GLU SER GLU PHE VAL TYR GLY ASP TYR LYS VAL TYR SEQRES 79 A 1364 ASP VAL ARG LYS MET ILE ALA LYS SER GLU GLN GLU ILE SEQRES 80 A 1364 GLY LYS ALA THR ALA LYS TYR PHE PHE TYR SER ASN ILE SEQRES 81 A 1364 MET ASN PHE PHE LYS THR GLU ILE THR LEU ALA ASN GLY SEQRES 82 A 1364 GLU ILE ARG LYS ARG PRO LEU ILE GLU THR ASN GLY GLU SEQRES 83 A 1364 THR GLY GLU ILE VAL TRP ASP LYS GLY ARG ASP PHE ALA SEQRES 84 A 1364 THR VAL ARG LYS VAL LEU SER MET PRO GLN VAL ASN ILE SEQRES 85 A 1364 VAL LYS LYS THR GLU VAL GLN THR GLY GLY PHE SER LYS SEQRES 86 A 1364 GLU SER ILE ARG PRO LYS ARG ASN SER ASP LYS LEU ILE SEQRES 87 A 1364 ALA ARG LYS LYS ASP TRP ASP PRO LYS LYS TYR GLY GLY SEQRES 88 A 1364 PHE LEU TRP PRO THR VAL ALA TYR SER VAL LEU VAL VAL SEQRES 89 A 1364 ALA LYS VAL GLU LYS GLY LYS SER LYS LYS LEU LYS SER SEQRES 90 A 1364 VAL LYS GLU LEU LEU GLY ILE THR ILE MET GLU ARG SER SEQRES 91 A 1364 SER PHE GLU LYS ASN PRO ILE ASP PHE LEU GLU ALA LYS SEQRES 92 A 1364 GLY TYR LYS GLU VAL LYS LYS ASP LEU ILE ILE LYS LEU SEQRES 93 A 1364 PRO LYS TYR SER LEU PHE GLU LEU GLU ASN GLY ARG LYS SEQRES 94 A 1364 ARG MET LEU ALA SER ALA LYS GLN LEU GLN LYS GLY ASN SEQRES 95 A 1364 GLU LEU ALA LEU PRO SER LYS TYR VAL ASN PHE LEU TYR SEQRES 96 A 1364 LEU ALA SER HIS TYR GLU LYS LEU LYS GLY SER PRO GLU SEQRES 97 A 1364 ASP ASN GLU GLN LYS GLN LEU PHE VAL GLU GLN HIS LYS SEQRES 98 A 1364 HIS TYR LEU ASP GLU ILE ILE GLU GLN ILE SER GLU PHE SEQRES 99 A 1364 SER LYS ARG VAL ILE LEU ALA ASP ALA ASN LEU ASP LYS SEQRES 100 A 1364 VAL LEU SER ALA TYR ASN LYS HIS ARG ASP LYS PRO ILE SEQRES 101 A 1364 ARG GLU GLN ALA GLU ASN ILE ILE HIS LEU PHE THR LEU SEQRES 102 A 1364 THR ARG LEU GLY ALA PRO ARG ALA PHE LYS TYR PHE ASP SEQRES 103 A 1364 THR THR ILE ASP PRO LYS GLN TYR ARG SER THR LYS GLU SEQRES 104 A 1364 VAL LEU ASP ALA THR LEU ILE HIS GLN SER ILE THR GLY SEQRES 105 A 1364 LEU TYR GLU THR ARG ILE ASP LEU SER GLN LEU GLY SEQRES 1 B 89 U A G A A A U A C G C G U SEQRES 2 B 89 U U U A G A G C U A G A A SEQRES 3 B 89 A U A G C A A G U U A A A SEQRES 4 B 89 A U A A G G C U A G U C C SEQRES 5 B 89 G U U A U C A A C U U G A SEQRES 6 B 89 A A A A G U G G C A C C G SEQRES 7 B 89 A G U C G G U G C U U SEQRES 1 C 20 DT DC DT DC DT DG DC DT DC DT DG DC DG SEQRES 2 C 20 DT DA DT DT DT DC DT SEQRES 1 D 9 DG DA DG DC DA DG DA DG DA HELIX 1 AA1 ALA A 59 ALA A 91 1 33 HELIX 2 AA2 SER A 96 SER A 104 1 9 HELIX 3 AA3 ASN A 121 TYR A 132 1 12 HELIX 4 AA4 THR A 134 SER A 145 1 12 HELIX 5 AA5 ASP A 150 PHE A 164 1 15 HELIX 6 AA6 LEU A 184 PHE A 196 1 13 HELIX 7 AA7 ALA A 208 SER A 213 1 6 HELIX 8 AA8 SER A 217 LEU A 229 1 13 HELIX 9 AA9 LEU A 241 LEU A 246 1 6 HELIX 10 AB1 LYS A 268 ASP A 272 5 5 HELIX 11 AB2 LEU A 289 LEU A 306 1 18 HELIX 12 AB3 ALA A 315 LEU A 343 1 29 HELIX 13 AB4 GLU A 345 PHE A 352 1 8 HELIX 14 AB5 GLY A 358 ASP A 364 1 7 HELIX 15 AB6 SER A 368 MET A 383 1 16 HELIX 16 AB7 THR A 386 ARG A 395 1 10 HELIX 17 AB8 THR A 404 ILE A 410 5 7 HELIX 18 AB9 PRO A 411 GLU A 427 1 17 HELIX 19 AC1 TYR A 430 ASN A 436 1 7 HELIX 20 AC2 ASN A 436 PHE A 446 1 11 HELIX 21 AC3 ASP A 483 ARG A 494 1 12 HELIX 22 AC4 SER A 512 LYS A 526 1 15 HELIX 23 AC5 SER A 541 LEU A 552 1 12 HELIX 24 AC6 THR A 560 PHE A 569 1 10 HELIX 25 AC7 LEU A 591 ILE A 601 1 11 HELIX 26 AC8 LYS A 604 ASN A 609 1 6 HELIX 27 AC9 ASN A 612 PHE A 626 1 15 HELIX 28 AD1 ASP A 628 LYS A 637 1 10 HELIX 29 AD2 THR A 638 PHE A 643 5 6 HELIX 30 AD3 ASP A 644 ARG A 654 1 11 HELIX 31 AD4 ARG A 664 ASN A 668 1 5 HELIX 32 AD5 THR A 678 SER A 685 1 8 HELIX 33 AD6 ASN A 692 HIS A 698 1 7 HELIX 34 AD7 PHE A 704 GLN A 712 1 9 HELIX 35 AD8 SER A 719 ASN A 726 1 8 HELIX 36 AD9 SER A 730 MET A 751 1 22 HELIX 37 AE1 ARG A 919 GLN A 926 1 8 HELIX 38 AE2 ILE A 927 LYS A 929 5 3 HELIX 39 AE3 HIS A 930 ASN A 940 1 11 HELIX 40 AE4 LYS A 959 PHE A 970 1 12 HELIX 41 AE5 ASN A 980 TYR A 1001 1 22 HELIX 42 AE6 LEU A 1004 VAL A 1009 1 6 HELIX 43 AE7 ILE A 1042 LYS A 1047 5 6 HELIX 44 AE8 GLY A 1077 SER A 1088 1 12 HELIX 45 AE9 GLU A 1170 ASN A 1177 1 8 HELIX 46 AF1 ASN A 1177 LYS A 1185 1 9 HELIX 47 AF2 GLU A 1207 GLY A 1209 5 3 HELIX 48 AF3 PRO A 1229 HIS A 1241 1 13 HELIX 49 AF4 SER A 1248 HIS A 1262 1 15 HELIX 50 AF5 LYS A 1263 VAL A 1280 1 18 HELIX 51 AF6 ALA A 1283 LYS A 1296 1 14 HELIX 52 AF7 PRO A 1301 PHE A 1313 1 13 HELIX 53 AF8 THR A 1314 THR A 1316 5 3 HELIX 54 AF9 LYS A 1340 ASP A 1344 5 5 HELIX 55 AG1 SER A 1363 LEU A 1365 5 3 SHEET 1 AA1 6 LYS A 954 LEU A 958 0 SHEET 2 AA1 6 ASN A 758 GLU A 762 1 N ILE A 761 O LEU A 958 SHEET 3 AA1 6 TYR A 5 ILE A 11 1 N ILE A 7 O ASN A 758 SHEET 4 AA1 6 SER A 15 THR A 22 -1 O ILE A 21 N SER A 6 SHEET 5 AA1 6 ILE A 48 LEU A 52 -1 O GLY A 49 N TRP A 18 SHEET 6 AA1 6 ASN A1093 LYS A1096 1 O VAL A1095 N LEU A 52 SHEET 1 AA2 7 SER A 42 ASN A 46 0 SHEET 2 AA2 7 SER A 29 LEU A 35 -1 N PHE A 32 O ILE A 43 SHEET 3 AA2 7 GLU A1357 ASP A1361 1 O ARG A1359 N LEU A 35 SHEET 4 AA2 7 THR A1346 GLN A1350 -1 N LEU A1347 O ILE A1360 SHEET 5 AA2 7 SER A1202 GLU A1205 -1 N LEU A1203 O ILE A1348 SHEET 6 AA2 7 LYS A1211 SER A1216 -1 O LEU A1214 N SER A1202 SHEET 7 AA2 7 GLN A1219 LYS A1222 -1 O GLN A1221 N MET A1213 SHEET 1 AA3 2 VAL A 507 PRO A 509 0 SHEET 2 AA3 2 TRP A 659 SER A 663 -1 O GLY A 660 N LEU A 508 SHEET 1 AA4 2 LYS A 528 TYR A 529 0 SHEET 2 AA4 2 ALA A 538 PHE A 539 -1 O ALA A 538 N TYR A 529 SHEET 1 AA5 2 ILE A1063 THR A1065 0 SHEET 2 AA5 2 ILE A1072 ASP A1075 -1 O TRP A1074 N GLU A1064 SHEET 1 AA6 3 LYS A1156 THR A1167 0 SHEET 2 AA6 3 VAL A1139 LYS A1151 -1 N ALA A1147 O VAL A1160 SHEET 3 AA6 3 ILE A1196 LEU A1198 -1 O LEU A1198 N SER A1142 SHEET 1 AA7 2 PHE A1324 LYS A1325 0 SHEET 2 AA7 2 THR A1330 ILE A1331 -1 O ILE A1331 N PHE A1324 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000