data_8TAA # _entry.id 8TAA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.401 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8TAA pdb_00008taa 10.2210/pdb8taa/pdb WWPDB D_1000274691 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-07-03 2 'Structure model' 2 0 2024-10-16 3 'Structure model' 2 1 2025-01-15 4 'Structure model' 2 2 2025-02-05 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' author 'Coordinate replacement' 'Model completeness' ;Added more atoms to the ligand and additional waters. Split four nucleotides due to two different positions for the phosphate backbones. ; # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Atomic model' 3 2 'Structure model' 'Author supporting evidence' 4 2 'Structure model' 'Data collection' 5 2 'Structure model' 'Derived calculations' 6 2 'Structure model' 'Experimental preparation' 7 2 'Structure model' 'Non-polymer description' 8 2 'Structure model' 'Refinement description' 9 2 'Structure model' 'Structure summary' 10 3 'Structure model' 'Database references' 11 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' atom_site_anisotrop 3 2 'Structure model' atom_type 4 2 'Structure model' chem_comp 5 2 'Structure model' chem_comp_atom 6 2 'Structure model' chem_comp_bond 7 2 'Structure model' entity 8 2 'Structure model' exptl_crystal_grow 9 2 'Structure model' ndb_struct_conf_na 10 2 'Structure model' ndb_struct_na_base_pair 11 2 'Structure model' ndb_struct_na_base_pair_step 12 2 'Structure model' pdbx_contact_author 13 2 'Structure model' pdbx_entity_instance_feature 14 2 'Structure model' pdbx_entity_nonpoly 15 2 'Structure model' pdbx_entry_details 16 2 'Structure model' pdbx_nonpoly_scheme 17 2 'Structure model' pdbx_refine_tls 18 2 'Structure model' pdbx_refine_tls_group 19 2 'Structure model' pdbx_struct_conn_angle 20 2 'Structure model' pdbx_unobs_or_zero_occ_atoms 21 2 'Structure model' pdbx_validate_rmsd_angle 22 2 'Structure model' pdbx_validate_rmsd_bond 23 2 'Structure model' refine 24 2 'Structure model' refine_hist 25 2 'Structure model' refine_ls_restr 26 2 'Structure model' refine_ls_shell 27 2 'Structure model' software 28 2 'Structure model' struct_conn 29 3 'Structure model' citation 30 3 'Structure model' citation_author 31 4 'Structure model' citation 32 4 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_chem_comp.formula' 2 2 'Structure model' '_chem_comp.formula_weight' 3 2 'Structure model' '_chem_comp.id' 4 2 'Structure model' '_chem_comp.name' 5 2 'Structure model' '_entity.formula_weight' 6 2 'Structure model' '_entity.pdbx_description' 7 2 'Structure model' '_entity.pdbx_number_of_molecules' 8 2 'Structure model' '_exptl_crystal_grow.pdbx_details' 9 2 'Structure model' '_pdbx_entity_nonpoly.comp_id' 10 2 'Structure model' '_pdbx_entity_nonpoly.name' 11 2 'Structure model' '_pdbx_entry_details.has_ligand_of_interest' 12 2 'Structure model' '_pdbx_entry_details.has_protein_modification' 13 2 'Structure model' '_refine.B_iso_mean' 14 2 'Structure model' '_refine.ls_R_factor_R_free' 15 2 'Structure model' '_refine.ls_R_factor_R_work' 16 2 'Structure model' '_refine.ls_R_factor_obs' 17 2 'Structure model' '_refine.overall_SU_ML' 18 2 'Structure model' '_refine.pdbx_R_Free_selection_details' 19 2 'Structure model' '_refine.pdbx_overall_phase_error' 20 2 'Structure model' '_refine_hist.number_atoms_solvent' 21 2 'Structure model' '_refine_hist.number_atoms_total' 22 2 'Structure model' '_refine_hist.pdbx_number_atoms_ligand' 23 2 'Structure model' '_refine_ls_restr.dev_ideal' 24 2 'Structure model' '_refine_ls_restr.number' 25 2 'Structure model' '_refine_ls_shell.R_factor_R_free' 26 2 'Structure model' '_refine_ls_shell.R_factor_R_work' 27 3 'Structure model' '_citation.country' 28 3 'Structure model' '_citation.journal_abbrev' 29 3 'Structure model' '_citation.journal_id_ASTM' 30 3 'Structure model' '_citation.journal_id_CSD' 31 3 'Structure model' '_citation.journal_id_ISSN' 32 3 'Structure model' '_citation.pdbx_database_id_DOI' 33 3 'Structure model' '_citation.pdbx_database_id_PubMed' 34 3 'Structure model' '_citation.title' 35 3 'Structure model' '_citation.year' 36 4 'Structure model' '_citation.journal_volume' 37 4 'Structure model' '_citation.year' 38 4 'Structure model' '_citation_author.identifier_ORCID' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8TAA _pdbx_database_status.recvd_initial_deposition_date 2023-06-27 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email lyatsun1@swarthmore.edu _pdbx_contact_author.name_first Liliya _pdbx_contact_author.name_last Yatsunyk _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-3946-0939 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Seth, P.C.' 1 0000-0003-4071-6970 'Yatsunyk, L.A.' 2 0000-0003-3946-0939 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 53 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Interaction of N-methylmesoporphyrin IX with a hybrid left-/right-handed G-quadruplex motif from the promoter of the SLC2A1 gene.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkae1208 _citation.pdbx_database_id_PubMed 39704129 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Seth, P.' 1 ? primary 'Xing, E.' 2 ? primary 'Hendrickson, A.D.' 3 ? primary 'Li, K.' 4 ? primary 'Monsen, R.' 5 ? primary 'Chaires, J.B.' 6 ? primary 'Neidle, S.' 7 ? primary 'Yatsunyk, L.A.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'DNA (25-MER)' 7969.085 1 ? ? ? ? 2 non-polymer syn 'SPERMINE (FULLY PROTONATED FORM)' 206.372 1 ? ? ? ? 3 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 1 ? ? ? ? 4 non-polymer syn N-METHYLMESOPORPHYRIN 580.716 1 ? ? ? ? 5 non-polymer syn 'POTASSIUM ION' 39.098 3 ? ? ? ? 6 water nat water 18.015 62 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;(DG)(DT)(DG)(DG)(DT)(DG)(DG)(DT)(DG)(DG)(DT)(DG)(DA)(DT)(DG)(DG)(DT)(DG)(DG)(DT) (DG)(DG)(DT)(DG)(DG) ; _entity_poly.pdbx_seq_one_letter_code_can GTGGTGGTGGTGATGGTGGTGGTGG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SPERMINE (FULLY PROTONATED FORM)' SPK 3 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 4 N-METHYLMESOPORPHYRIN MMP 5 'POTASSIUM ION' K 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DT n 1 3 DG n 1 4 DG n 1 5 DT n 1 6 DG n 1 7 DG n 1 8 DT n 1 9 DG n 1 10 DG n 1 11 DT n 1 12 DG n 1 13 DA n 1 14 DT n 1 15 DG n 1 16 DG n 1 17 DT n 1 18 DG n 1 19 DG n 1 20 DT n 1 21 DG n 1 22 DG n 1 23 DT n 1 24 DG n 1 25 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 25 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 MMP non-polymer . N-METHYLMESOPORPHYRIN ? 'C35 H40 N4 O4' 580.716 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 SPK non-polymer . 'SPERMINE (FULLY PROTONATED FORM)' ? 'C10 H30 N4 4' 206.372 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG DG A . n A 1 2 DT 2 2 2 DT DT A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 DG 4 4 4 DG DG A . n A 1 5 DT 5 5 5 DT DT A . n A 1 6 DG 6 6 6 DG DG A . n A 1 7 DG 7 7 7 DG DG A . n A 1 8 DT 8 8 8 DT DT A . n A 1 9 DG 9 9 9 DG DG A . n A 1 10 DG 10 10 10 DG DG A . n A 1 11 DT 11 11 11 DT DT A . n A 1 12 DG 12 12 12 DG DG A . n A 1 13 DA 13 13 13 DA DA A . n A 1 14 DT 14 14 14 DT DT A . n A 1 15 DG 15 15 15 DG DG A . n A 1 16 DG 16 16 16 DG DG A . n A 1 17 DT 17 17 17 DT DT A . n A 1 18 DG 18 18 18 DG DG A . n A 1 19 DG 19 19 19 DG DG A . n A 1 20 DT 20 20 20 DT DT A . n A 1 21 DG 21 21 21 DG DG A . n A 1 22 DG 22 22 22 DG DG A . n A 1 23 DT 23 23 23 DT DT A . n A 1 24 DG 24 24 24 DG DG A . n A 1 25 DG 25 25 25 DG DG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SPK 1 101 66 SPK SPM A . C 3 MPD 1 102 67 MPD MPD A . D 4 MMP 1 103 68 MMP MMP A . E 5 K 1 104 1 K K A . F 5 K 1 105 2 K K A . G 5 K 1 106 3 K K A . H 6 HOH 1 201 37 HOH HOH A . H 6 HOH 2 202 5 HOH HOH A . H 6 HOH 3 203 26 HOH HOH A . H 6 HOH 4 204 18 HOH HOH A . H 6 HOH 5 205 11 HOH HOH A . H 6 HOH 6 206 41 HOH HOH A . H 6 HOH 7 207 12 HOH HOH A . H 6 HOH 8 208 46 HOH HOH A . H 6 HOH 9 209 2 HOH HOH A . H 6 HOH 10 210 36 HOH HOH A . H 6 HOH 11 211 13 HOH HOH A . H 6 HOH 12 212 6 HOH HOH A . H 6 HOH 13 213 8 HOH HOH A . H 6 HOH 14 214 7 HOH HOH A . H 6 HOH 15 215 16 HOH HOH A . H 6 HOH 16 216 45 HOH HOH A . H 6 HOH 17 217 21 HOH HOH A . H 6 HOH 18 218 31 HOH HOH A . H 6 HOH 19 219 25 HOH HOH A . H 6 HOH 20 220 15 HOH HOH A . H 6 HOH 21 221 32 HOH HOH A . H 6 HOH 22 222 38 HOH HOH A . H 6 HOH 23 223 42 HOH HOH A . H 6 HOH 24 224 4 HOH HOH A . H 6 HOH 25 225 3 HOH HOH A . H 6 HOH 26 226 60 HOH HOH A . H 6 HOH 27 227 17 HOH HOH A . H 6 HOH 28 228 58 HOH HOH A . H 6 HOH 29 229 19 HOH HOH A . H 6 HOH 30 230 49 HOH HOH A . H 6 HOH 31 231 10 HOH HOH A . H 6 HOH 32 232 33 HOH HOH A . H 6 HOH 33 233 23 HOH HOH A . H 6 HOH 34 234 53 HOH HOH A . H 6 HOH 35 235 61 HOH HOH A . H 6 HOH 36 236 47 HOH HOH A . H 6 HOH 37 237 24 HOH HOH A . H 6 HOH 38 238 59 HOH HOH A . H 6 HOH 39 239 22 HOH HOH A . H 6 HOH 40 240 54 HOH HOH A . H 6 HOH 41 241 51 HOH HOH A . H 6 HOH 42 242 27 HOH HOH A . H 6 HOH 43 243 35 HOH HOH A . H 6 HOH 44 244 48 HOH HOH A . H 6 HOH 45 245 29 HOH HOH A . H 6 HOH 46 246 20 HOH HOH A . H 6 HOH 47 247 30 HOH HOH A . H 6 HOH 48 248 1 HOH HOH A . H 6 HOH 49 249 40 HOH HOH A . H 6 HOH 50 250 14 HOH HOH A . H 6 HOH 51 251 55 HOH HOH A . H 6 HOH 52 252 39 HOH HOH A . H 6 HOH 53 253 28 HOH HOH A . H 6 HOH 54 254 43 HOH HOH A . H 6 HOH 55 255 62 HOH HOH A . H 6 HOH 56 256 50 HOH HOH A . H 6 HOH 57 257 34 HOH HOH A . H 6 HOH 58 258 57 HOH HOH A . H 6 HOH 59 259 44 HOH HOH A . H 6 HOH 60 260 56 HOH HOH A . H 6 HOH 61 261 9 HOH HOH A . H 6 HOH 62 262 52 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A MMP 103 ? C28 ? D MMP 1 C28 2 1 N 1 A MMP 103 ? C39 ? D MMP 1 C39 3 1 N 1 A MMP 103 ? O31 ? D MMP 1 O31 4 1 N 1 A MMP 103 ? O32 ? D MMP 1 O32 5 1 N 1 A MMP 103 ? C49 ? D MMP 1 C49 6 1 N 1 A MMP 103 ? O41 ? D MMP 1 O41 7 1 N 1 A MMP 103 ? O42 ? D MMP 1 O42 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.21.2_5419 1 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? 0.8.9.2 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.21.2_5419 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8TAA _cell.details ? _cell.formula_units_Z ? _cell.length_a 30.897 _cell.length_a_esd ? _cell.length_b 30.897 _cell.length_b_esd ? _cell.length_c 141.543 _cell.length_c_esd ? _cell.volume 135120.431 _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8TAA _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8TAA _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.17 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 43 _exptl_crystal.description 'Amorphous cubes' _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '2 mM Spermine, 45% MPD, 0.08 M NaCl, 0.04 M NaCaCo pH 6.0' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 196 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-10-29 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97918 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97918 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 28.44 _reflns.entry_id 8TAA _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.45 _reflns.d_resolution_low 141.54 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 13141 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 12.2 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 21.0 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.051 _reflns.pdbx_Rpim_I_all 0.015 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half .999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs .049 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.45 _reflns_shell.d_res_low 1.47 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 647 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 1.866 _reflns_shell.pdbx_Rpim_I_all 0.523 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.678 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.789 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 41.75 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8TAA _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.45 _refine.ls_d_res_low 35.39 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 13049 _refine.ls_number_reflns_R_free 702 _refine.ls_number_reflns_R_work 12347 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.87 _refine.ls_percent_reflns_R_free 5.38 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1809 _refine.ls_R_factor_R_free 0.2268 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1783 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 28.3357 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1904 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.45 _refine_hist.d_res_low 35.39 _refine_hist.number_atoms_solvent 62 _refine_hist.number_atoms_total 653 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 530 _refine_hist.pdbx_number_atoms_ligand 61 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0063 ? 752 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.0093 ? 1162 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0410 ? 116 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0104 ? 33 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 34.9078 ? 331 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.45 1.56 . . 142 2400 100.00 . . . . 0.2387 . . . . . . . . . . . 0.3081 'X-RAY DIFFRACTION' 1.56 1.72 . . 127 2414 99.73 . . . . 0.1789 . . . . . . . . . . . 0.2283 'X-RAY DIFFRACTION' 1.72 1.97 . . 137 2408 99.84 . . . . 0.1893 . . . . . . . . . . . 0.2937 'X-RAY DIFFRACTION' 1.97 2.48 . . 142 2471 100.00 . . . . 0.2368 . . . . . . . . . . . 0.2649 'X-RAY DIFFRACTION' 2.48 35.39 . . 154 2654 99.79 . . . . 0.1608 . . . . . . . . . . . 0.2046 # _struct.entry_id 8TAA _struct.title 'Right-left hybrid parallel G-quadruplex in complex with N-methyl mesoporphyrin' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8TAA _struct_keywords.text 'G-quadruplex, right-left-handed, parallel, NMM, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 6 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8TAA _struct_ref.pdbx_db_accession 8TAA _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8TAA _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 25 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 8TAA _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 25 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 25 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 1 O6 ? ? ? 1_555 E K . K ? ? A DG 1 A K 104 1_555 ? ? ? ? ? ? ? 2.886 ? ? metalc2 metalc ? ? A DG 1 O6 ? ? ? 1_555 F K . K ? ? A DG 1 A K 105 1_555 ? ? ? ? ? ? ? 2.801 ? ? metalc3 metalc ? ? A DG 3 O6 ? ? ? 1_555 E K . K ? ? A DG 3 A K 104 1_555 ? ? ? ? ? ? ? 2.742 ? ? metalc4 metalc ? ? A DG 4 O6 ? ? ? 1_555 E K . K ? ? A DG 4 A K 104 1_555 ? ? ? ? ? ? ? 2.897 ? ? metalc5 metalc ? ? A DG 4 O6 ? ? ? 1_555 F K . K ? ? A DG 4 A K 105 1_555 ? ? ? ? ? ? ? 2.759 ? ? metalc6 metalc ? ? A DG 6 O6 ? ? ? 1_555 E K . K ? ? A DG 6 A K 104 1_555 ? ? ? ? ? ? ? 2.809 ? ? metalc7 metalc ? ? A DG 7 O6 ? ? ? 1_555 E K . K ? ? A DG 7 A K 104 1_555 ? ? ? ? ? ? ? 2.933 ? ? metalc8 metalc ? ? A DG 7 O6 ? ? ? 1_555 F K . K ? ? A DG 7 A K 105 1_555 ? ? ? ? ? ? ? 2.833 ? ? metalc9 metalc ? ? A DG 9 O6 ? ? ? 1_555 E K . K ? ? A DG 9 A K 104 1_555 ? ? ? ? ? ? ? 2.785 ? ? metalc10 metalc ? ? A DG 10 O6 ? ? ? 1_555 E K . K ? ? A DG 10 A K 104 1_555 ? ? ? ? ? ? ? 2.832 ? ? metalc11 metalc ? ? A DG 10 O6 ? ? ? 1_555 F K . K ? ? A DG 10 A K 105 1_555 ? ? ? ? ? ? ? 2.775 ? ? metalc12 metalc ? ? A DG 12 O6 ? ? ? 1_555 E K . K ? ? A DG 12 A K 104 1_555 ? ? ? ? ? ? ? 2.785 ? ? metalc13 metalc ? ? A DG 15 O6 ? ? ? 1_555 F K . K ? ? A DG 15 A K 105 1_555 ? ? ? ? ? ? ? 2.865 ? ? metalc14 metalc ? ? A DG 15 O6 ? ? ? 1_555 G K . K ? ? A DG 15 A K 106 1_555 ? ? ? ? ? ? ? 2.884 ? ? metalc15 metalc ? ? A DG 16 O6 ? ? ? 1_555 G K . K ? ? A DG 16 A K 106 1_555 ? ? ? ? ? ? ? 2.703 ? ? metalc16 metalc ? ? A DG 18 O6 ? ? ? 1_555 F K . K ? ? A DG 18 A K 105 1_555 ? ? ? ? ? ? ? 2.836 ? ? metalc17 metalc ? ? A DG 18 O6 ? ? ? 1_555 G K . K ? ? A DG 18 A K 106 1_555 ? ? ? ? ? ? ? 2.825 ? ? metalc18 metalc ? ? A DG 19 O6 ? ? ? 1_555 G K . K ? ? A DG 19 A K 106 1_555 ? ? ? ? ? ? ? 2.711 ? ? metalc19 metalc ? ? A DG 21 O6 A ? ? 1_555 F K . K ? ? A DG 21 A K 105 1_555 ? ? ? ? ? ? ? 2.897 ? ? metalc20 metalc ? ? A DG 21 O6 B ? ? 1_555 F K . K ? ? A DG 21 A K 105 1_555 ? ? ? ? ? ? ? 2.780 ? ? metalc21 metalc ? ? A DG 21 O6 A ? ? 1_555 G K . K ? ? A DG 21 A K 106 1_555 ? ? ? ? ? ? ? 2.744 ? ? metalc22 metalc ? ? A DG 21 O6 B ? ? 1_555 G K . K ? ? A DG 21 A K 106 1_555 ? ? ? ? ? ? ? 3.013 ? ? metalc23 metalc ? ? A DG 22 O6 ? ? ? 1_555 G K . K ? ? A DG 22 A K 106 1_555 ? ? ? ? ? ? ? 2.674 ? ? metalc24 metalc ? ? A DG 24 O6 A ? ? 1_555 F K . K ? ? A DG 24 A K 105 1_555 ? ? ? ? ? ? ? 2.790 ? ? metalc25 metalc ? ? A DG 24 O6 B ? ? 1_555 F K . K ? ? A DG 24 A K 105 1_555 ? ? ? ? ? ? ? 3.010 ? ? metalc26 metalc ? ? A DG 24 O6 A ? ? 1_555 G K . K ? ? A DG 24 A K 106 1_555 ? ? ? ? ? ? ? 2.838 ? ? metalc27 metalc ? ? A DG 24 O6 B ? ? 1_555 G K . K ? ? A DG 24 A K 106 1_555 ? ? ? ? ? ? ? 2.763 ? ? metalc28 metalc ? ? A DG 25 O6 ? ? ? 1_555 G K . K ? ? A DG 25 A K 106 1_555 ? ? ? ? ? ? ? 2.760 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 A DG 4 O6 ? ? A DG 1 A DG 4 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DG 4 N7 ? ? A DG 1 A DG 4 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog3 hydrog ? ? A DG 1 N7 ? ? ? 1_555 A DG 10 N2 ? ? A DG 1 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A DG 1 O6 ? ? ? 1_555 A DG 10 N1 ? ? A DG 1 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DG 6 O6 ? ? A DG 3 A DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DG 6 N7 ? ? A DG 3 A DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A DG 3 N7 ? ? ? 1_555 A DG 12 N2 ? ? A DG 3 A DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DG 12 N1 ? ? A DG 3 A DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DG 7 O6 ? ? A DG 4 A DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DG 7 N7 ? ? A DG 4 A DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog11 hydrog ? ? A DG 6 N1 ? ? ? 1_555 A DG 9 O6 ? ? A DG 6 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog12 hydrog ? ? A DG 6 N2 ? ? ? 1_555 A DG 9 N7 ? ? A DG 6 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? A DG 7 N1 ? ? ? 1_555 A DG 10 O6 ? ? A DG 7 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? A DG 7 N2 ? ? ? 1_555 A DG 10 N7 ? ? A DG 7 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DG 12 O6 ? ? A DG 9 A DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DG 12 N7 ? ? A DG 9 A DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A DG 15 N1 ? ? ? 1_555 A DG 18 O6 ? ? A DG 15 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A DG 15 N2 ? ? ? 1_555 A DG 18 N7 ? ? A DG 15 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A DG 15 N7 ? ? ? 1_555 A DG 24 N2 A ? A DG 15 A DG 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A DG 15 N7 ? ? ? 1_555 A DG 24 N2 B ? A DG 15 A DG 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A DG 15 O6 ? ? ? 1_555 A DG 24 N1 A ? A DG 15 A DG 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A DG 15 O6 ? ? ? 1_555 A DG 24 N1 B ? A DG 15 A DG 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A DG 16 N1 ? ? ? 1_555 A DG 19 O6 ? ? A DG 16 A DG 19 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? A DG 16 N2 ? ? ? 1_555 A DG 19 N7 ? ? A DG 16 A DG 19 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog25 hydrog ? ? A DG 16 N7 ? ? ? 1_555 A DG 25 N2 ? ? A DG 16 A DG 25 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog26 hydrog ? ? A DG 16 O6 ? ? ? 1_555 A DG 25 N1 ? ? A DG 16 A DG 25 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog27 hydrog ? ? A DG 18 N1 ? ? ? 1_555 A DG 21 O6 B ? A DG 18 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog28 hydrog ? ? A DG 18 N1 ? ? ? 1_555 A DG 21 O6 A ? A DG 18 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog29 hydrog ? ? A DG 18 N2 ? ? ? 1_555 A DG 21 N7 B ? A DG 18 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog30 hydrog ? ? A DG 18 N2 ? ? ? 1_555 A DG 21 N7 A ? A DG 18 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog31 hydrog ? ? A DG 19 N1 ? ? ? 1_555 A DG 22 O6 ? ? A DG 19 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog32 hydrog ? ? A DG 19 N2 ? ? ? 1_555 A DG 22 N7 ? ? A DG 19 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog33 hydrog ? ? A DG 21 N1 A ? ? 1_555 A DG 24 O6 A ? A DG 21 A DG 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog34 hydrog ? ? A DG 21 N1 B ? ? 1_555 A DG 24 O6 B ? A DG 21 A DG 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog35 hydrog ? ? A DG 21 N2 A ? ? 1_555 A DG 24 N7 A ? A DG 21 A DG 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog36 hydrog ? ? A DG 21 N2 B ? ? 1_555 A DG 24 N7 B ? A DG 21 A DG 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog37 hydrog ? ? A DG 22 N1 ? ? ? 1_555 A DG 25 O6 ? ? A DG 22 A DG 25 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog38 hydrog ? ? A DG 22 N2 ? ? ? 1_555 A DG 25 N7 ? ? A DG 22 A DG 25 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 3 ? A DG 3 ? 1_555 91.0 ? 2 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 4 ? A DG 4 ? 1_555 66.5 ? 3 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 4 ? A DG 4 ? 1_555 79.6 ? 4 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 157.1 ? 5 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 73.4 ? 6 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 93.7 ? 7 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 102.5 ? 8 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 133.4 ? 9 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 66.2 ? 10 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 78.0 ? 11 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 133.3 ? 12 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 109.4 ? 13 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 156.1 ? 14 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 69.0 ? 15 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 93.3 ? 16 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 67.1 ? 17 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 155.0 ? 18 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 100.9 ? 19 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 131.0 ? 20 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 66.4 ? 21 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 80.3 ? 22 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 75.7 ? 23 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 68.8 ? 24 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 129.7 ? 25 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 112.4 ? 26 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 157.7 ? 27 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 73.7 ? 28 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 93.2 ? 29 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 ? A DG 4 ? A DG 4 ? 1_555 69.5 ? 30 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 107.4 ? 31 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 69.4 ? 32 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 69.0 ? 33 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 105.9 ? 34 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 68.5 ? 35 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 87.6 ? 36 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 150.6 ? 37 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 137.5 ? 38 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 81.2 ? 39 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 149.6 ? 40 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 139.8 ? 41 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 83.6 ? 42 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 90.1 ? 43 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 66.9 ? 44 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 A A DG 21 ? A DG 21 ? 1_555 136.8 ? 45 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 A A DG 21 ? A DG 21 ? 1_555 83.8 ? 46 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 A A DG 21 ? A DG 21 ? 1_555 93.2 ? 47 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 A A DG 21 ? A DG 21 ? 1_555 153.5 ? 48 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 A A DG 21 ? A DG 21 ? 1_555 102.6 ? 49 O6 ? A DG 18 ? A DG 18 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 A A DG 21 ? A DG 21 ? 1_555 68.1 ? 50 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 B A DG 21 ? A DG 21 ? 1_555 136.9 ? 51 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 B A DG 21 ? A DG 21 ? 1_555 79.1 ? 52 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 B A DG 21 ? A DG 21 ? 1_555 87.4 ? 53 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 B A DG 21 ? A DG 21 ? 1_555 150.7 ? 54 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 B A DG 21 ? A DG 21 ? 1_555 108.8 ? 55 O6 ? A DG 18 ? A DG 18 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 B A DG 21 ? A DG 21 ? 1_555 70.2 ? 56 O6 A A DG 21 ? A DG 21 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 B A DG 21 ? A DG 21 ? 1_555 6.4 ? 57 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 A A DG 24 ? A DG 24 ? 1_555 80.0 ? 58 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 A A DG 24 ? A DG 24 ? 1_555 88.9 ? 59 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 A A DG 24 ? A DG 24 ? 1_555 151.7 ? 60 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 A A DG 24 ? A DG 24 ? 1_555 137.4 ? 61 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 A A DG 24 ? A DG 24 ? 1_555 68.6 ? 62 O6 ? A DG 18 ? A DG 18 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 A A DG 24 ? A DG 24 ? 1_555 104.0 ? 63 O6 A A DG 21 ? A DG 21 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 A A DG 24 ? A DG 24 ? 1_555 65.8 ? 64 O6 B A DG 21 ? A DG 21 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 A A DG 24 ? A DG 24 ? 1_555 70.4 ? 65 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 B A DG 24 ? A DG 24 ? 1_555 83.0 ? 66 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 B A DG 24 ? A DG 24 ? 1_555 90.0 ? 67 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 B A DG 24 ? A DG 24 ? 1_555 150.7 ? 68 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 B A DG 24 ? A DG 24 ? 1_555 139.6 ? 69 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 B A DG 24 ? A DG 24 ? 1_555 68.6 ? 70 O6 ? A DG 18 ? A DG 18 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 B A DG 24 ? A DG 24 ? 1_555 101.3 ? 71 O6 A A DG 21 ? A DG 21 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 B A DG 24 ? A DG 24 ? 1_555 63.1 ? 72 O6 B A DG 21 ? A DG 21 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 B A DG 24 ? A DG 24 ? 1_555 67.8 ? 73 O6 A A DG 24 ? A DG 24 ? 1_555 K ? F K . ? A K 105 ? 1_555 O6 B A DG 24 ? A DG 24 ? 1_555 3.1 ? 74 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 74.6 ? 75 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 66.7 ? 76 O6 ? A DG 16 ? A DG 16 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 89.5 ? 77 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 ? A DG 19 ? A DG 19 ? 1_555 132.2 ? 78 O6 ? A DG 16 ? A DG 16 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 ? A DG 19 ? A DG 19 ? 1_555 75.3 ? 79 O6 ? A DG 18 ? A DG 18 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 ? A DG 19 ? A DG 19 ? 1_555 76.8 ? 80 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 A A DG 21 ? A DG 21 ? 1_555 106.0 ? 81 O6 ? A DG 16 ? A DG 16 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 A A DG 21 ? A DG 21 ? 1_555 157.0 ? 82 O6 ? A DG 18 ? A DG 18 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 A A DG 21 ? A DG 21 ? 1_555 70.4 ? 83 O6 ? A DG 19 ? A DG 19 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 A A DG 21 ? A DG 21 ? 1_555 88.8 ? 84 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 B A DG 21 ? A DG 21 ? 1_555 102.2 ? 85 O6 ? A DG 16 ? A DG 16 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 B A DG 21 ? A DG 21 ? 1_555 155.0 ? 86 O6 ? A DG 18 ? A DG 18 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 B A DG 21 ? A DG 21 ? 1_555 67.1 ? 87 O6 ? A DG 19 ? A DG 19 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 B A DG 21 ? A DG 21 ? 1_555 90.3 ? 88 O6 A A DG 21 ? A DG 21 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 B A DG 21 ? A DG 21 ? 1_555 4.1 ? 89 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 152.7 ? 90 O6 ? A DG 16 ? A DG 16 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 115.2 ? 91 O6 ? A DG 18 ? A DG 18 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 135.2 ? 92 O6 ? A DG 19 ? A DG 19 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 74.7 ? 93 O6 A A DG 21 ? A DG 21 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 75.1 ? 94 O6 B A DG 21 ? A DG 21 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 79.2 ? 95 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 A A DG 24 ? A DG 24 ? 1_555 67.7 ? 96 O6 ? A DG 16 ? A DG 16 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 A A DG 24 ? A DG 24 ? 1_555 130.7 ? 97 O6 ? A DG 18 ? A DG 18 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 A A DG 24 ? A DG 24 ? 1_555 103.0 ? 98 O6 ? A DG 19 ? A DG 19 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 A A DG 24 ? A DG 24 ? 1_555 153.8 ? 99 O6 A A DG 21 ? A DG 21 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 A A DG 24 ? A DG 24 ? 1_555 67.2 ? 100 O6 B A DG 21 ? A DG 21 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 A A DG 24 ? A DG 24 ? 1_555 66.5 ? 101 O6 ? A DG 22 ? A DG 22 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 A A DG 24 ? A DG 24 ? 1_555 88.7 ? 102 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 B A DG 24 ? A DG 24 ? 1_555 71.8 ? 103 O6 ? A DG 16 ? A DG 16 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 B A DG 24 ? A DG 24 ? 1_555 131.1 ? 104 O6 ? A DG 18 ? A DG 18 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 B A DG 24 ? A DG 24 ? 1_555 108.1 ? 105 O6 ? A DG 19 ? A DG 19 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 B A DG 24 ? A DG 24 ? 1_555 152.2 ? 106 O6 A A DG 21 ? A DG 21 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 B A DG 24 ? A DG 24 ? 1_555 68.3 ? 107 O6 B A DG 21 ? A DG 21 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 B A DG 24 ? A DG 24 ? 1_555 68.0 ? 108 O6 ? A DG 22 ? A DG 22 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 B A DG 24 ? A DG 24 ? 1_555 84.0 ? 109 O6 A A DG 24 ? A DG 24 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 B A DG 24 ? A DG 24 ? 1_555 5.3 ? 110 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 ? A DG 25 ? A DG 25 ? 1_555 88.1 ? 111 O6 ? A DG 16 ? A DG 16 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 ? A DG 25 ? A DG 25 ? 1_555 71.4 ? 112 O6 ? A DG 18 ? A DG 18 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 ? A DG 25 ? A DG 25 ? 1_555 152.0 ? 113 O6 ? A DG 19 ? A DG 19 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 ? A DG 25 ? A DG 25 ? 1_555 115.9 ? 114 O6 A A DG 21 ? A DG 21 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 ? A DG 25 ? A DG 25 ? 1_555 131.4 ? 115 O6 B A DG 21 ? A DG 21 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 ? A DG 25 ? A DG 25 ? 1_555 133.6 ? 116 O6 ? A DG 22 ? A DG 22 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 ? A DG 25 ? A DG 25 ? 1_555 72.7 ? 117 O6 A A DG 24 ? A DG 24 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 ? A DG 25 ? A DG 25 ? 1_555 76.6 ? 118 O6 B A DG 24 ? A DG 24 ? 1_555 K ? G K . ? A K 106 ? 1_555 O6 ? A DG 25 ? A DG 25 ? 1_555 73.0 ? # _pdbx_entry_details.entry_id 8TAA _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification N # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y+1/2,x+1/2,z+1/4 3 y+1/2,-x+1/2,z+3/4 4 x+1/2,-y+1/2,-z+3/4 5 -x+1/2,y+1/2,-z+1/4 6 -x,-y,z+1/2 7 y,x,-z 8 -y,-x,-z+1/2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DG OP3 O N N 37 DG P P N N 38 DG OP1 O N N 39 DG OP2 O N N 40 DG "O5'" O N N 41 DG "C5'" C N N 42 DG "C4'" C N R 43 DG "O4'" O N N 44 DG "C3'" C N S 45 DG "O3'" O N N 46 DG "C2'" C N N 47 DG "C1'" C N R 48 DG N9 N Y N 49 DG C8 C Y N 50 DG N7 N Y N 51 DG C5 C Y N 52 DG C6 C N N 53 DG O6 O N N 54 DG N1 N N N 55 DG C2 C N N 56 DG N2 N N N 57 DG N3 N N N 58 DG C4 C Y N 59 DG HOP3 H N N 60 DG HOP2 H N N 61 DG "H5'" H N N 62 DG "H5''" H N N 63 DG "H4'" H N N 64 DG "H3'" H N N 65 DG "HO3'" H N N 66 DG "H2'" H N N 67 DG "H2''" H N N 68 DG "H1'" H N N 69 DG H8 H N N 70 DG H1 H N N 71 DG H21 H N N 72 DG H22 H N N 73 DT OP3 O N N 74 DT P P N N 75 DT OP1 O N N 76 DT OP2 O N N 77 DT "O5'" O N N 78 DT "C5'" C N N 79 DT "C4'" C N R 80 DT "O4'" O N N 81 DT "C3'" C N S 82 DT "O3'" O N N 83 DT "C2'" C N N 84 DT "C1'" C N R 85 DT N1 N N N 86 DT C2 C N N 87 DT O2 O N N 88 DT N3 N N N 89 DT C4 C N N 90 DT O4 O N N 91 DT C5 C N N 92 DT C7 C N N 93 DT C6 C N N 94 DT HOP3 H N N 95 DT HOP2 H N N 96 DT "H5'" H N N 97 DT "H5''" H N N 98 DT "H4'" H N N 99 DT "H3'" H N N 100 DT "HO3'" H N N 101 DT "H2'" H N N 102 DT "H2''" H N N 103 DT "H1'" H N N 104 DT H3 H N N 105 DT H71 H N N 106 DT H72 H N N 107 DT H73 H N N 108 DT H6 H N N 109 HOH O O N N 110 HOH H1 H N N 111 HOH H2 H N N 112 K K K N N 113 MMP C1 C N N 114 MMP N1 N Y N 115 MMP C11 C Y N 116 MMP C12 C Y N 117 MMP C13 C Y N 118 MMP C14 C Y N 119 MMP C15 C Y N 120 MMP C16 C N N 121 MMP C17 C N N 122 MMP C18 C N N 123 MMP N2 N Y N 124 MMP C21 C Y N 125 MMP C22 C N N 126 MMP C23 C N N 127 MMP C24 C Y N 128 MMP C25 C Y N 129 MMP C26 C N N 130 MMP C27 C N N 131 MMP C28 C N N 132 MMP N3 N Y N 133 MMP C31 C Y N 134 MMP C32 C Y N 135 MMP C33 C Y N 136 MMP C34 C Y N 137 MMP C35 C Y N 138 MMP C36 C N N 139 MMP C37 C N N 140 MMP C38 C N N 141 MMP C39 C N N 142 MMP O31 O N N 143 MMP O32 O N N 144 MMP N4 N Y N 145 MMP C41 C Y N 146 MMP C42 C N N 147 MMP C43 C N N 148 MMP C44 C Y N 149 MMP C45 C Y N 150 MMP C46 C N N 151 MMP C47 C N N 152 MMP C48 C N N 153 MMP C49 C N N 154 MMP O41 O N N 155 MMP O42 O N N 156 MMP H11 H N N 157 MMP H12 H N N 158 MMP H13 H N N 159 MMP H15 H N N 160 MMP H161 H N N 161 MMP H162 H N N 162 MMP H163 H N N 163 MMP H171 H N N 164 MMP H172 H N N 165 MMP H181 H N N 166 MMP H182 H N N 167 MMP H183 H N N 168 MMP H25 H N N 169 MMP H261 H N N 170 MMP H262 H N N 171 MMP H263 H N N 172 MMP H271 H N N 173 MMP H272 H N N 174 MMP H281 H N N 175 MMP H282 H N N 176 MMP H283 H N N 177 MMP HN3 H N N 178 MMP H35 H N N 179 MMP H361 H N N 180 MMP H362 H N N 181 MMP H363 H N N 182 MMP H371 H N N 183 MMP H372 H N N 184 MMP H381 H N N 185 MMP H382 H N N 186 MMP HO31 H N N 187 MMP H45 H N N 188 MMP H461 H N N 189 MMP H462 H N N 190 MMP H463 H N N 191 MMP H471 H N N 192 MMP H472 H N N 193 MMP H481 H N N 194 MMP H482 H N N 195 MMP HO41 H N N 196 MPD C1 C N N 197 MPD C2 C N N 198 MPD O2 O N N 199 MPD CM C N N 200 MPD C3 C N N 201 MPD C4 C N S 202 MPD O4 O N N 203 MPD C5 C N N 204 MPD H11 H N N 205 MPD H12 H N N 206 MPD H13 H N N 207 MPD HO2 H N N 208 MPD HM1 H N N 209 MPD HM2 H N N 210 MPD HM3 H N N 211 MPD H31 H N N 212 MPD H32 H N N 213 MPD H4 H N N 214 MPD HO4 H N N 215 MPD H51 H N N 216 MPD H52 H N N 217 MPD H53 H N N 218 SPK N1 N N N 219 SPK C2 C N N 220 SPK C3 C N N 221 SPK C4 C N N 222 SPK N5 N N N 223 SPK C6 C N N 224 SPK C7 C N N 225 SPK C8 C N N 226 SPK C9 C N N 227 SPK N10 N N N 228 SPK C11 C N N 229 SPK C12 C N N 230 SPK C13 C N N 231 SPK N14 N N N 232 SPK H1A H N N 233 SPK H1B H N N 234 SPK H1C H N N 235 SPK H2A H N N 236 SPK H2B H N N 237 SPK H3A H N N 238 SPK H3B H N N 239 SPK H4A H N N 240 SPK H4B H N N 241 SPK H5A H N N 242 SPK H5B H N N 243 SPK H6A H N N 244 SPK H6B H N N 245 SPK H7A H N N 246 SPK H7B H N N 247 SPK H8A H N N 248 SPK H8B H N N 249 SPK H9A H N N 250 SPK H9B H N N 251 SPK H101 H N N 252 SPK H102 H N N 253 SPK H111 H N N 254 SPK H112 H N N 255 SPK H121 H N N 256 SPK H122 H N N 257 SPK H131 H N N 258 SPK H132 H N N 259 SPK H141 H N N 260 SPK H142 H N N 261 SPK H143 H N N 262 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DG OP3 P sing N N 39 DG OP3 HOP3 sing N N 40 DG P OP1 doub N N 41 DG P OP2 sing N N 42 DG P "O5'" sing N N 43 DG OP2 HOP2 sing N N 44 DG "O5'" "C5'" sing N N 45 DG "C5'" "C4'" sing N N 46 DG "C5'" "H5'" sing N N 47 DG "C5'" "H5''" sing N N 48 DG "C4'" "O4'" sing N N 49 DG "C4'" "C3'" sing N N 50 DG "C4'" "H4'" sing N N 51 DG "O4'" "C1'" sing N N 52 DG "C3'" "O3'" sing N N 53 DG "C3'" "C2'" sing N N 54 DG "C3'" "H3'" sing N N 55 DG "O3'" "HO3'" sing N N 56 DG "C2'" "C1'" sing N N 57 DG "C2'" "H2'" sing N N 58 DG "C2'" "H2''" sing N N 59 DG "C1'" N9 sing N N 60 DG "C1'" "H1'" sing N N 61 DG N9 C8 sing Y N 62 DG N9 C4 sing Y N 63 DG C8 N7 doub Y N 64 DG C8 H8 sing N N 65 DG N7 C5 sing Y N 66 DG C5 C6 sing N N 67 DG C5 C4 doub Y N 68 DG C6 O6 doub N N 69 DG C6 N1 sing N N 70 DG N1 C2 sing N N 71 DG N1 H1 sing N N 72 DG C2 N2 sing N N 73 DG C2 N3 doub N N 74 DG N2 H21 sing N N 75 DG N2 H22 sing N N 76 DG N3 C4 sing N N 77 DT OP3 P sing N N 78 DT OP3 HOP3 sing N N 79 DT P OP1 doub N N 80 DT P OP2 sing N N 81 DT P "O5'" sing N N 82 DT OP2 HOP2 sing N N 83 DT "O5'" "C5'" sing N N 84 DT "C5'" "C4'" sing N N 85 DT "C5'" "H5'" sing N N 86 DT "C5'" "H5''" sing N N 87 DT "C4'" "O4'" sing N N 88 DT "C4'" "C3'" sing N N 89 DT "C4'" "H4'" sing N N 90 DT "O4'" "C1'" sing N N 91 DT "C3'" "O3'" sing N N 92 DT "C3'" "C2'" sing N N 93 DT "C3'" "H3'" sing N N 94 DT "O3'" "HO3'" sing N N 95 DT "C2'" "C1'" sing N N 96 DT "C2'" "H2'" sing N N 97 DT "C2'" "H2''" sing N N 98 DT "C1'" N1 sing N N 99 DT "C1'" "H1'" sing N N 100 DT N1 C2 sing N N 101 DT N1 C6 sing N N 102 DT C2 O2 doub N N 103 DT C2 N3 sing N N 104 DT N3 C4 sing N N 105 DT N3 H3 sing N N 106 DT C4 O4 doub N N 107 DT C4 C5 sing N N 108 DT C5 C7 sing N N 109 DT C5 C6 doub N N 110 DT C7 H71 sing N N 111 DT C7 H72 sing N N 112 DT C7 H73 sing N N 113 DT C6 H6 sing N N 114 HOH O H1 sing N N 115 HOH O H2 sing N N 116 MMP C1 N1 sing N N 117 MMP C1 H11 sing N N 118 MMP C1 H12 sing N N 119 MMP C1 H13 sing N N 120 MMP N1 C11 sing Y N 121 MMP N1 C14 sing Y N 122 MMP C11 C12 doub Y N 123 MMP C11 C45 sing Y N 124 MMP C12 C13 sing Y N 125 MMP C12 C16 sing N N 126 MMP C13 C14 doub Y N 127 MMP C13 C17 sing N N 128 MMP C14 C15 sing Y N 129 MMP C15 C21 doub Y Z 130 MMP C15 H15 sing N N 131 MMP C16 H161 sing N N 132 MMP C16 H162 sing N N 133 MMP C16 H163 sing N N 134 MMP C17 C18 sing N N 135 MMP C17 H171 sing N N 136 MMP C17 H172 sing N N 137 MMP C18 H181 sing N N 138 MMP C18 H182 sing N N 139 MMP C18 H183 sing N N 140 MMP N2 C21 sing Y N 141 MMP N2 C24 doub Y N 142 MMP C21 C22 sing N N 143 MMP C22 C23 doub N N 144 MMP C22 C26 sing N N 145 MMP C23 C24 sing N N 146 MMP C23 C27 sing N N 147 MMP C24 C25 sing Y N 148 MMP C25 C31 doub Y Z 149 MMP C25 H25 sing N N 150 MMP C26 H261 sing N N 151 MMP C26 H262 sing N N 152 MMP C26 H263 sing N N 153 MMP C27 C28 sing N N 154 MMP C27 H271 sing N N 155 MMP C27 H272 sing N N 156 MMP C28 H281 sing N N 157 MMP C28 H282 sing N N 158 MMP C28 H283 sing N N 159 MMP N3 C31 sing Y N 160 MMP N3 C34 sing Y N 161 MMP N3 HN3 sing N N 162 MMP C31 C32 sing Y N 163 MMP C32 C33 doub Y N 164 MMP C32 C36 sing N N 165 MMP C33 C34 sing Y N 166 MMP C33 C37 sing N N 167 MMP C34 C35 doub Y Z 168 MMP C35 C41 sing Y N 169 MMP C35 H35 sing N N 170 MMP C36 H361 sing N N 171 MMP C36 H362 sing N N 172 MMP C36 H363 sing N N 173 MMP C37 C38 sing N N 174 MMP C37 H371 sing N N 175 MMP C37 H372 sing N N 176 MMP C38 C39 sing N N 177 MMP C38 H381 sing N N 178 MMP C38 H382 sing N N 179 MMP C39 O31 sing N N 180 MMP C39 O32 doub N N 181 MMP O31 HO31 sing N N 182 MMP N4 C41 doub Y N 183 MMP N4 C44 sing Y N 184 MMP C41 C42 sing N N 185 MMP C42 C43 doub N N 186 MMP C42 C47 sing N N 187 MMP C43 C44 sing N N 188 MMP C43 C46 sing N N 189 MMP C44 C45 doub Y Z 190 MMP C45 H45 sing N N 191 MMP C46 H461 sing N N 192 MMP C46 H462 sing N N 193 MMP C46 H463 sing N N 194 MMP C47 C48 sing N N 195 MMP C47 H471 sing N N 196 MMP C47 H472 sing N N 197 MMP C48 C49 sing N N 198 MMP C48 H481 sing N N 199 MMP C48 H482 sing N N 200 MMP C49 O41 sing N N 201 MMP C49 O42 doub N N 202 MMP O41 HO41 sing N N 203 MPD C1 C2 sing N N 204 MPD C1 H11 sing N N 205 MPD C1 H12 sing N N 206 MPD C1 H13 sing N N 207 MPD C2 O2 sing N N 208 MPD C2 CM sing N N 209 MPD C2 C3 sing N N 210 MPD O2 HO2 sing N N 211 MPD CM HM1 sing N N 212 MPD CM HM2 sing N N 213 MPD CM HM3 sing N N 214 MPD C3 C4 sing N N 215 MPD C3 H31 sing N N 216 MPD C3 H32 sing N N 217 MPD C4 O4 sing N N 218 MPD C4 C5 sing N N 219 MPD C4 H4 sing N N 220 MPD O4 HO4 sing N N 221 MPD C5 H51 sing N N 222 MPD C5 H52 sing N N 223 MPD C5 H53 sing N N 224 SPK N1 C2 sing N N 225 SPK N1 H1A sing N N 226 SPK N1 H1B sing N N 227 SPK N1 H1C sing N N 228 SPK C2 C3 sing N N 229 SPK C2 H2A sing N N 230 SPK C2 H2B sing N N 231 SPK C3 C4 sing N N 232 SPK C3 H3A sing N N 233 SPK C3 H3B sing N N 234 SPK C4 N5 sing N N 235 SPK C4 H4A sing N N 236 SPK C4 H4B sing N N 237 SPK N5 C6 sing N N 238 SPK N5 H5A sing N N 239 SPK N5 H5B sing N N 240 SPK C6 C7 sing N N 241 SPK C6 H6A sing N N 242 SPK C6 H6B sing N N 243 SPK C7 C8 sing N N 244 SPK C7 H7A sing N N 245 SPK C7 H7B sing N N 246 SPK C8 C9 sing N N 247 SPK C8 H8A sing N N 248 SPK C8 H8B sing N N 249 SPK C9 N10 sing N N 250 SPK C9 H9A sing N N 251 SPK C9 H9B sing N N 252 SPK N10 C11 sing N N 253 SPK N10 H101 sing N N 254 SPK N10 H102 sing N N 255 SPK C11 C12 sing N N 256 SPK C11 H111 sing N N 257 SPK C11 H112 sing N N 258 SPK C12 C13 sing N N 259 SPK C12 H121 sing N N 260 SPK C12 H122 sing N N 261 SPK C13 N14 sing N N 262 SPK C13 H131 sing N N 263 SPK C13 H132 sing N N 264 SPK N14 H141 sing N N 265 SPK N14 H142 sing N N 266 SPK N14 H143 sing N N 267 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8TAA 'double helix' 8TAA 'z-form double helix' 8TAA 'triple helix' 8TAA 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 3 1_555 A DG 12 1_555 1.558 -3.308 0.009 -4.152 -4.258 -88.563 1 A_DG3:DG12_A A 3 ? A 12 ? 6 3 1 A DG 6 1_555 A DG 9 1_555 -1.591 3.369 -0.087 11.328 4.627 89.761 2 A_DG6:DG9_A A 6 ? A 9 ? 6 3 1 A DG 1 1_555 A DG 10 1_555 1.536 -3.449 -0.049 -1.962 -1.473 -89.720 3 A_DG1:DG10_A A 1 ? A 10 ? 6 3 1 A DG 4 1_555 A DG 7 1_555 1.530 3.529 -0.123 -0.389 3.986 -89.764 4 A_DG4:DG7_A A 4 ? A 7 ? 6 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 3 1_555 A DG 12 1_555 A DG 6 1_555 A DG 9 1_555 1.755 -3.347 -0.075 -5.840 -5.485 -179.350 1.673 0.878 -0.075 2.743 -2.920 -179.351 1 AA_DG3DG6:DG9DG12_AA A 3 ? A 12 ? A 6 ? A 9 ? 1 A DG 6 1_555 A DG 9 1_555 A DG 1 1_555 A DG 10 1_555 1.392 -2.874 3.447 -6.234 -2.413 -115.845 1.721 0.752 3.455 1.423 -3.677 -115.967 2 AA_DG6DG1:DG10DG9_AA A 6 ? A 9 ? A 1 ? A 10 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Cancer Institute (NIH/NCI)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number 1R15CA253134 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6QJO _pdbx_initial_refinement_model.details 'Other existing right-left hybrid G-quadruplex' # _space_group.name_H-M_alt 'P 41 21 2' _space_group.name_Hall 'P 4abw 2nw' _space_group.IT_number 92 _space_group.crystal_system tetragonal _space_group.id 1 # _atom_sites.entry_id 8TAA _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.032366 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.032366 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007065 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? ? ? ? ? ? ? ? ? ? ? ? K ? ? 8.66788 8.58341 1.68052 ? 12.31593 0.56275 110.00227 ? 0.0 ;3-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ # loop_ #