data_8TG3 # _entry.id 8TG3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8TG3 pdb_00008tg3 10.2210/pdb8tg3/pdb WWPDB D_1000275893 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 8TFI _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8TG3 _pdbx_database_status.recvd_initial_deposition_date 2023-07-12 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Jacewicz, A.' 1 ? 'Dantuluri, S.' 2 ? 'Shuman, S.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 120 _citation.language ? _citation.page_first e2312999120 _citation.page_last e2312999120 _citation.title ;Structural basis for Tpt1-catalyzed 2'-PO 4 transfer from RNA and NADP(H) to NAD. ; _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.2312999120 _citation.pdbx_database_id_PubMed 37883434 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jacewicz, A.' 1 0000-0001-7827-6507 primary 'Dantuluri, S.' 2 ? primary 'Shuman, S.' 3 0000-0001-5034-6438 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 97.740 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8TG3 _cell.details ? _cell.formula_units_Z ? _cell.length_a 39.891 _cell.length_a_esd ? _cell.length_b 55.883 _cell.length_b_esd ? _cell.length_c 42.403 _cell.length_c_esd ? _cell.volume 93664.800 _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8TG3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ;Probable RNA 2'-phosphotransferase ; 23382.023 1 2.7.1.- ? ? ? 2 non-polymer syn ;[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-3,4-bis(oxidanyl)-5-phosphonooxy-oxolan-2-yl]methyl hydrogen phosphate ; 639.296 1 ? ? ? ? 3 non-polymer syn 'NITRATE ION' 62.005 3 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 5 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 1 ? ? ? ? 6 non-polymer syn 'POTASSIUM ION' 39.098 1 ? ? ? ? 7 water nat water 18.015 179 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGLVPRGSHMRVRLSKTLAGILRHHPGRYGVRLTREGWARVSEVVEGLRKAGWSWVEEWHIVGVALHDP KGRYELRNGEIRARYGHSIPVNVEPLPGEPPPILYHGTTEEALPLIMERGIMRGRRLKVHLTSSLEDAVSTGRRHGNLVA VLLVDVECLRRRGLKVERMSKTVYTVDWVPPECIAEVRRESLGRSL ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSHMRVRLSKTLAGILRHHPGRYGVRLTREGWARVSEVVEGLRKAGWSWVEEWHIVGVALHDP KGRYELRNGEIRARYGHSIPVNVEPLPGEPPPILYHGTTEEALPLIMERGIMRGRRLKVHLTSSLEDAVSTGRRHGNLVA VLLVDVECLRRRGLKVERMSKTVYTVDWVPPECIAEVRRESLGRSL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 ARG n 1 23 VAL n 1 24 ARG n 1 25 LEU n 1 26 SER n 1 27 LYS n 1 28 THR n 1 29 LEU n 1 30 ALA n 1 31 GLY n 1 32 ILE n 1 33 LEU n 1 34 ARG n 1 35 HIS n 1 36 HIS n 1 37 PRO n 1 38 GLY n 1 39 ARG n 1 40 TYR n 1 41 GLY n 1 42 VAL n 1 43 ARG n 1 44 LEU n 1 45 THR n 1 46 ARG n 1 47 GLU n 1 48 GLY n 1 49 TRP n 1 50 ALA n 1 51 ARG n 1 52 VAL n 1 53 SER n 1 54 GLU n 1 55 VAL n 1 56 VAL n 1 57 GLU n 1 58 GLY n 1 59 LEU n 1 60 ARG n 1 61 LYS n 1 62 ALA n 1 63 GLY n 1 64 TRP n 1 65 SER n 1 66 TRP n 1 67 VAL n 1 68 GLU n 1 69 GLU n 1 70 TRP n 1 71 HIS n 1 72 ILE n 1 73 VAL n 1 74 GLY n 1 75 VAL n 1 76 ALA n 1 77 LEU n 1 78 HIS n 1 79 ASP n 1 80 PRO n 1 81 LYS n 1 82 GLY n 1 83 ARG n 1 84 TYR n 1 85 GLU n 1 86 LEU n 1 87 ARG n 1 88 ASN n 1 89 GLY n 1 90 GLU n 1 91 ILE n 1 92 ARG n 1 93 ALA n 1 94 ARG n 1 95 TYR n 1 96 GLY n 1 97 HIS n 1 98 SER n 1 99 ILE n 1 100 PRO n 1 101 VAL n 1 102 ASN n 1 103 VAL n 1 104 GLU n 1 105 PRO n 1 106 LEU n 1 107 PRO n 1 108 GLY n 1 109 GLU n 1 110 PRO n 1 111 PRO n 1 112 PRO n 1 113 ILE n 1 114 LEU n 1 115 TYR n 1 116 HIS n 1 117 GLY n 1 118 THR n 1 119 THR n 1 120 GLU n 1 121 GLU n 1 122 ALA n 1 123 LEU n 1 124 PRO n 1 125 LEU n 1 126 ILE n 1 127 MET n 1 128 GLU n 1 129 ARG n 1 130 GLY n 1 131 ILE n 1 132 MET n 1 133 ARG n 1 134 GLY n 1 135 ARG n 1 136 ARG n 1 137 LEU n 1 138 LYS n 1 139 VAL n 1 140 HIS n 1 141 LEU n 1 142 THR n 1 143 SER n 1 144 SER n 1 145 LEU n 1 146 GLU n 1 147 ASP n 1 148 ALA n 1 149 VAL n 1 150 SER n 1 151 THR n 1 152 GLY n 1 153 ARG n 1 154 ARG n 1 155 HIS n 1 156 GLY n 1 157 ASN n 1 158 LEU n 1 159 VAL n 1 160 ALA n 1 161 VAL n 1 162 LEU n 1 163 LEU n 1 164 VAL n 1 165 ASP n 1 166 VAL n 1 167 GLU n 1 168 CYS n 1 169 LEU n 1 170 ARG n 1 171 ARG n 1 172 ARG n 1 173 GLY n 1 174 LEU n 1 175 LYS n 1 176 VAL n 1 177 GLU n 1 178 ARG n 1 179 MET n 1 180 SER n 1 181 LYS n 1 182 THR n 1 183 VAL n 1 184 TYR n 1 185 THR n 1 186 VAL n 1 187 ASP n 1 188 TRP n 1 189 VAL n 1 190 PRO n 1 191 PRO n 1 192 GLU n 1 193 CYS n 1 194 ILE n 1 195 ALA n 1 196 GLU n 1 197 VAL n 1 198 ARG n 1 199 ARG n 1 200 GLU n 1 201 SER n 1 202 LEU n 1 203 GLY n 1 204 ARG n 1 205 SER n 1 206 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 206 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'kptA, APE_0204.1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Aeropyrum pernix' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 56636 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Codon Plus' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pet28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code KPTA_AERPE _struct_ref.pdbx_db_accession Q9YFP5 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MRVRLSKTLAGILRHHPGRYGVRLTREGWARVSEVVEGLRKAGWSWVEEWHIVGVALHDPKGRYELRNGEIRARYGHSIP VNVEPLPGEPPPILYHGTTEEALPLIMERGIMRGRRLKVHLTSSLEDAVSTGRRHGNLVAVLLVDVECLRRRGLKVERMS KTVYTVDWVPPECIAEVRRESLGRSL ; _struct_ref.pdbx_align_begin 35 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8TG3 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 21 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 206 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9YFP5 _struct_ref_seq.db_align_beg 35 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 220 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 186 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8TG3 MET A 1 ? UNP Q9YFP5 ? ? 'expression tag' -19 1 1 8TG3 GLY A 2 ? UNP Q9YFP5 ? ? 'expression tag' -18 2 1 8TG3 SER A 3 ? UNP Q9YFP5 ? ? 'expression tag' -17 3 1 8TG3 SER A 4 ? UNP Q9YFP5 ? ? 'expression tag' -16 4 1 8TG3 HIS A 5 ? UNP Q9YFP5 ? ? 'expression tag' -15 5 1 8TG3 HIS A 6 ? UNP Q9YFP5 ? ? 'expression tag' -14 6 1 8TG3 HIS A 7 ? UNP Q9YFP5 ? ? 'expression tag' -13 7 1 8TG3 HIS A 8 ? UNP Q9YFP5 ? ? 'expression tag' -12 8 1 8TG3 HIS A 9 ? UNP Q9YFP5 ? ? 'expression tag' -11 9 1 8TG3 HIS A 10 ? UNP Q9YFP5 ? ? 'expression tag' -10 10 1 8TG3 SER A 11 ? UNP Q9YFP5 ? ? 'expression tag' -9 11 1 8TG3 SER A 12 ? UNP Q9YFP5 ? ? 'expression tag' -8 12 1 8TG3 GLY A 13 ? UNP Q9YFP5 ? ? 'expression tag' -7 13 1 8TG3 LEU A 14 ? UNP Q9YFP5 ? ? 'expression tag' -6 14 1 8TG3 VAL A 15 ? UNP Q9YFP5 ? ? 'expression tag' -5 15 1 8TG3 PRO A 16 ? UNP Q9YFP5 ? ? 'expression tag' -4 16 1 8TG3 ARG A 17 ? UNP Q9YFP5 ? ? 'expression tag' -3 17 1 8TG3 GLY A 18 ? UNP Q9YFP5 ? ? 'expression tag' -2 18 1 8TG3 SER A 19 ? UNP Q9YFP5 ? ? 'expression tag' -1 19 1 8TG3 HIS A 20 ? UNP Q9YFP5 ? ? 'expression tag' 0 20 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 HQG non-polymer . ;[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-3,4-bis(oxidanyl)-5-phosphonooxy-oxolan-2-yl]methyl hydrogen phosphate ; ? 'C15 H24 N5 O17 P3' 639.296 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NO3 non-polymer . 'NITRATE ION' ? 'N O3 -1' 62.005 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8TG3 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.00 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 38.59 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M KNO3, pH 6.9, 20% PEG-3350' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 295 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-11-23 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 18.73 _reflns.entry_id 8TG3 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.47 _reflns.d_resolution_low 55.88 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 29455 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 93.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.5 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 14.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.037 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.076 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.47 _reflns_shell.d_res_low 1.50 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.0 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1392 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 5.6 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.348 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.809 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 90.9 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.762 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 24.59 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8TG3 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.47 _refine.ls_d_res_low 42.02 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 29425 _refine.ls_number_reflns_R_free 1453 _refine.ls_number_reflns_R_work 27972 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 93.56 _refine.ls_percent_reflns_R_free 4.94 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1628 _refine.ls_R_factor_R_free 0.1971 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1610 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1WFX _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 22.3896 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1814 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.47 _refine_hist.d_res_low 42.02 _refine_hist.number_atoms_solvent 179 _refine_hist.number_atoms_total 1751 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1500 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 72 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0121 ? 1621 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.3090 ? 2195 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0919 ? 240 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0216 ? 275 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 12.4398 ? 298 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.47 1.52 . . 139 2653 89.89 . . . . 0.2550 . . . . . . . . . . . 0.2935 'X-RAY DIFFRACTION' 1.52 1.58 . . 124 2697 90.74 . . . . 0.2103 . . . . . . . . . . . 0.2508 'X-RAY DIFFRACTION' 1.58 1.66 . . 136 2734 91.78 . . . . 0.1846 . . . . . . . . . . . 0.2174 'X-RAY DIFFRACTION' 1.66 1.74 . . 165 2620 88.36 . . . . 0.1695 . . . . . . . . . . . 0.2394 'X-RAY DIFFRACTION' 1.74 1.85 . . 162 2864 95.91 . . . . 0.1671 . . . . . . . . . . . 0.2348 'X-RAY DIFFRACTION' 1.85 1.99 . . 148 2833 95.06 . . . . 0.1577 . . . . . . . . . . . 0.1921 'X-RAY DIFFRACTION' 2.00 2.20 . . 137 2856 95.59 . . . . 0.1472 . . . . . . . . . . . 0.2020 'X-RAY DIFFRACTION' 2.20 2.51 . . 146 2814 93.64 . . . . 0.1654 . . . . . . . . . . . 0.1970 'X-RAY DIFFRACTION' 2.51 3.17 . . 154 2925 97.90 . . . . 0.1628 . . . . . . . . . . . 0.1785 'X-RAY DIFFRACTION' 3.17 42.02 . . 142 2976 96.56 . . . . 0.1488 . . . . . . . . . . . 0.1824 # _struct.entry_id 8TG3 _struct.title ;tRNA 2'-phosphotransferase (Tpt1) from Aeropyrum pernix in complex with ADP-ribose-1" -phosphate ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8TG3 _struct_keywords.text ;tRNA 2'-PHOSPHOTRANSFERASE, TPT1, tRNA SPLICING, ADP-ribose-1"-phosphate, Aeropyrum pernix, TRANSFERASE ; _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 3 ? G N N 3 ? H N N 5 ? I N N 6 ? J N N 7 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 MET A 21 ? HIS A 35 ? MET A 1 HIS A 15 1 ? 15 HELX_P HELX_P2 AA2 HIS A 36 ? GLY A 41 ? HIS A 16 GLY A 21 5 ? 6 HELX_P HELX_P3 AA3 VAL A 52 ? ALA A 62 ? VAL A 32 ALA A 42 1 ? 11 HELX_P HELX_P4 AA4 GLU A 68 ? HIS A 78 ? GLU A 48 HIS A 58 1 ? 11 HELX_P HELX_P5 AA5 ALA A 122 ? GLY A 130 ? ALA A 102 GLY A 110 1 ? 9 HELX_P HELX_P6 AA6 SER A 144 ? ARG A 154 ? SER A 124 ARG A 134 1 ? 11 HELX_P HELX_P7 AA7 VAL A 166 ? ARG A 171 ? VAL A 146 ARG A 151 1 ? 6 HELX_P HELX_P8 AA8 PRO A 190 ? GLU A 192 ? PRO A 170 GLU A 172 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 168 SG ? ? ? 1_555 A CYS 193 SG ? ? A CYS 148 A CYS 173 1_555 ? ? ? ? ? ? ? 2.033 ? ? metalc1 metalc ? ? I K . K ? ? ? 1_555 J HOH . O ? ? A K 308 A HOH 420 1_555 ? ? ? ? ? ? ? 2.410 ? ? metalc2 metalc ? ? I K . K ? ? ? 1_555 J HOH . O ? ? A K 308 A HOH 496 1_555 ? ? ? ? ? ? ? 2.669 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 3 ? AA3 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ALA A 50 ? ARG A 51 ? ALA A 30 ARG A 31 AA1 2 GLU A 90 ? ALA A 93 ? GLU A 70 ALA A 73 AA1 3 TYR A 84 ? ARG A 87 ? TYR A 64 ARG A 67 AA2 1 ILE A 113 ? THR A 119 ? ILE A 93 THR A 99 AA2 2 LEU A 158 ? ASP A 165 ? LEU A 138 ASP A 145 AA2 3 ILE A 194 ? SER A 201 ? ILE A 174 SER A 181 AA3 1 VAL A 139 ? THR A 142 ? VAL A 119 THR A 122 AA3 2 VAL A 183 ? VAL A 186 ? VAL A 163 VAL A 166 AA3 3 GLU A 177 ? ARG A 178 ? GLU A 157 ARG A 158 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ALA A 50 ? N ALA A 30 O ILE A 91 ? O ILE A 71 AA1 2 3 O GLU A 90 ? O GLU A 70 N ARG A 87 ? N ARG A 67 AA2 1 2 N LEU A 114 ? N LEU A 94 O VAL A 164 ? O VAL A 144 AA2 2 3 N VAL A 161 ? N VAL A 141 O ARG A 198 ? O ARG A 178 AA3 1 2 N LEU A 141 ? N LEU A 121 O TYR A 184 ? O TYR A 164 AA3 2 3 O THR A 185 ? O THR A 165 N GLU A 177 ? N GLU A 157 # _atom_sites.entry_id 8TG3 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.025068 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003407 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017895 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023800 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? K ? ? 8.66788 8.58341 1.68052 ? 12.31593 0.56275 110.00227 ? 0.0 ;3-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -19 ? ? ? A . n A 1 2 GLY 2 -18 ? ? ? A . n A 1 3 SER 3 -17 ? ? ? A . n A 1 4 SER 4 -16 ? ? ? A . n A 1 5 HIS 5 -15 ? ? ? A . n A 1 6 HIS 6 -14 ? ? ? A . n A 1 7 HIS 7 -13 ? ? ? A . n A 1 8 HIS 8 -12 ? ? ? A . n A 1 9 HIS 9 -11 ? ? ? A . n A 1 10 HIS 10 -10 ? ? ? A . n A 1 11 SER 11 -9 ? ? ? A . n A 1 12 SER 12 -8 ? ? ? A . n A 1 13 GLY 13 -7 ? ? ? A . n A 1 14 LEU 14 -6 ? ? ? A . n A 1 15 VAL 15 -5 ? ? ? A . n A 1 16 PRO 16 -4 ? ? ? A . n A 1 17 ARG 17 -3 ? ? ? A . n A 1 18 GLY 18 -2 ? ? ? A . n A 1 19 SER 19 -1 ? ? ? A . n A 1 20 HIS 20 0 20 HIS HIS A . n A 1 21 MET 21 1 21 MET MET A . n A 1 22 ARG 22 2 22 ARG ARG A . n A 1 23 VAL 23 3 23 VAL VAL A . n A 1 24 ARG 24 4 24 ARG ARG A . n A 1 25 LEU 25 5 25 LEU LEU A . n A 1 26 SER 26 6 26 SER SER A . n A 1 27 LYS 27 7 27 LYS LYS A . n A 1 28 THR 28 8 28 THR THR A . n A 1 29 LEU 29 9 29 LEU LEU A . n A 1 30 ALA 30 10 30 ALA ALA A . n A 1 31 GLY 31 11 31 GLY GLY A . n A 1 32 ILE 32 12 32 ILE ILE A . n A 1 33 LEU 33 13 33 LEU LEU A . n A 1 34 ARG 34 14 34 ARG ARG A . n A 1 35 HIS 35 15 35 HIS HIS A . n A 1 36 HIS 36 16 36 HIS HIS A . n A 1 37 PRO 37 17 37 PRO PRO A . n A 1 38 GLY 38 18 38 GLY GLY A . n A 1 39 ARG 39 19 39 ARG ARG A . n A 1 40 TYR 40 20 40 TYR TYR A . n A 1 41 GLY 41 21 41 GLY GLY A . n A 1 42 VAL 42 22 42 VAL VAL A . n A 1 43 ARG 43 23 43 ARG ARG A . n A 1 44 LEU 44 24 44 LEU LEU A . n A 1 45 THR 45 25 45 THR THR A . n A 1 46 ARG 46 26 46 ARG ARG A . n A 1 47 GLU 47 27 47 GLU GLU A . n A 1 48 GLY 48 28 48 GLY GLY A . n A 1 49 TRP 49 29 49 TRP TRP A . n A 1 50 ALA 50 30 50 ALA ALA A . n A 1 51 ARG 51 31 51 ARG ARG A . n A 1 52 VAL 52 32 52 VAL VAL A . n A 1 53 SER 53 33 53 SER SER A . n A 1 54 GLU 54 34 54 GLU GLU A . n A 1 55 VAL 55 35 55 VAL VAL A . n A 1 56 VAL 56 36 56 VAL VAL A . n A 1 57 GLU 57 37 57 GLU GLU A . n A 1 58 GLY 58 38 58 GLY GLY A . n A 1 59 LEU 59 39 59 LEU LEU A . n A 1 60 ARG 60 40 60 ARG ARG A . n A 1 61 LYS 61 41 61 LYS LYS A . n A 1 62 ALA 62 42 62 ALA ALA A . n A 1 63 GLY 63 43 63 GLY GLY A . n A 1 64 TRP 64 44 64 TRP TRP A . n A 1 65 SER 65 45 65 SER SER A . n A 1 66 TRP 66 46 66 TRP TRP A . n A 1 67 VAL 67 47 67 VAL VAL A . n A 1 68 GLU 68 48 68 GLU GLU A . n A 1 69 GLU 69 49 69 GLU GLU A . n A 1 70 TRP 70 50 70 TRP TRP A . n A 1 71 HIS 71 51 71 HIS HIS A . n A 1 72 ILE 72 52 72 ILE ILE A . n A 1 73 VAL 73 53 73 VAL VAL A . n A 1 74 GLY 74 54 74 GLY GLY A . n A 1 75 VAL 75 55 75 VAL VAL A . n A 1 76 ALA 76 56 76 ALA ALA A . n A 1 77 LEU 77 57 77 LEU LEU A . n A 1 78 HIS 78 58 78 HIS HIS A . n A 1 79 ASP 79 59 79 ASP ASP A . n A 1 80 PRO 80 60 80 PRO PRO A . n A 1 81 LYS 81 61 81 LYS LYS A . n A 1 82 GLY 82 62 82 GLY GLY A . n A 1 83 ARG 83 63 83 ARG ARG A . n A 1 84 TYR 84 64 84 TYR TYR A . n A 1 85 GLU 85 65 85 GLU GLU A . n A 1 86 LEU 86 66 86 LEU LEU A . n A 1 87 ARG 87 67 87 ARG ARG A . n A 1 88 ASN 88 68 88 ASN ASN A . n A 1 89 GLY 89 69 89 GLY GLY A . n A 1 90 GLU 90 70 90 GLU GLU A . n A 1 91 ILE 91 71 91 ILE ILE A . n A 1 92 ARG 92 72 92 ARG ARG A . n A 1 93 ALA 93 73 93 ALA ALA A . n A 1 94 ARG 94 74 94 ARG ARG A . n A 1 95 TYR 95 75 95 TYR TYR A . n A 1 96 GLY 96 76 96 GLY GLY A . n A 1 97 HIS 97 77 97 HIS HIS A . n A 1 98 SER 98 78 98 SER SER A . n A 1 99 ILE 99 79 99 ILE ILE A . n A 1 100 PRO 100 80 100 PRO PRO A . n A 1 101 VAL 101 81 101 VAL VAL A . n A 1 102 ASN 102 82 102 ASN ASN A . n A 1 103 VAL 103 83 103 VAL VAL A . n A 1 104 GLU 104 84 104 GLU GLU A . n A 1 105 PRO 105 85 105 PRO PRO A . n A 1 106 LEU 106 86 106 LEU LEU A . n A 1 107 PRO 107 87 107 PRO PRO A . n A 1 108 GLY 108 88 108 GLY GLY A . n A 1 109 GLU 109 89 109 GLU GLU A . n A 1 110 PRO 110 90 110 PRO PRO A . n A 1 111 PRO 111 91 111 PRO PRO A . n A 1 112 PRO 112 92 112 PRO PRO A . n A 1 113 ILE 113 93 113 ILE ILE A . n A 1 114 LEU 114 94 114 LEU LEU A . n A 1 115 TYR 115 95 115 TYR TYR A . n A 1 116 HIS 116 96 116 HIS HIS A . n A 1 117 GLY 117 97 117 GLY GLY A . n A 1 118 THR 118 98 118 THR THR A . n A 1 119 THR 119 99 119 THR THR A . n A 1 120 GLU 120 100 120 GLU GLU A . n A 1 121 GLU 121 101 121 GLU GLU A . n A 1 122 ALA 122 102 122 ALA ALA A . n A 1 123 LEU 123 103 123 LEU LEU A . n A 1 124 PRO 124 104 124 PRO PRO A . n A 1 125 LEU 125 105 125 LEU LEU A . n A 1 126 ILE 126 106 126 ILE ILE A . n A 1 127 MET 127 107 127 MET MET A . n A 1 128 GLU 128 108 128 GLU GLU A . n A 1 129 ARG 129 109 129 ARG ARG A . n A 1 130 GLY 130 110 130 GLY GLY A . n A 1 131 ILE 131 111 131 ILE ILE A . n A 1 132 MET 132 112 132 MET MET A . n A 1 133 ARG 133 113 133 ARG ARG A . n A 1 134 GLY 134 114 134 GLY GLY A . n A 1 135 ARG 135 115 135 ARG ARG A . n A 1 136 ARG 136 116 136 ARG ARG A . n A 1 137 LEU 137 117 137 LEU LEU A . n A 1 138 LYS 138 118 138 LYS LYS A . n A 1 139 VAL 139 119 139 VAL VAL A . n A 1 140 HIS 140 120 140 HIS HIS A . n A 1 141 LEU 141 121 141 LEU LEU A . n A 1 142 THR 142 122 142 THR THR A . n A 1 143 SER 143 123 143 SER SER A . n A 1 144 SER 144 124 144 SER SER A . n A 1 145 LEU 145 125 145 LEU LEU A . n A 1 146 GLU 146 126 146 GLU GLU A . n A 1 147 ASP 147 127 147 ASP ASP A . n A 1 148 ALA 148 128 148 ALA ALA A . n A 1 149 VAL 149 129 149 VAL VAL A . n A 1 150 SER 150 130 150 SER SER A . n A 1 151 THR 151 131 151 THR THR A . n A 1 152 GLY 152 132 152 GLY GLY A . n A 1 153 ARG 153 133 153 ARG ARG A . n A 1 154 ARG 154 134 154 ARG ARG A . n A 1 155 HIS 155 135 155 HIS HIS A . n A 1 156 GLY 156 136 156 GLY GLY A . n A 1 157 ASN 157 137 157 ASN ASN A . n A 1 158 LEU 158 138 158 LEU LEU A . n A 1 159 VAL 159 139 159 VAL VAL A . n A 1 160 ALA 160 140 160 ALA ALA A . n A 1 161 VAL 161 141 161 VAL VAL A . n A 1 162 LEU 162 142 162 LEU LEU A . n A 1 163 LEU 163 143 163 LEU LEU A . n A 1 164 VAL 164 144 164 VAL VAL A . n A 1 165 ASP 165 145 165 ASP ASP A . n A 1 166 VAL 166 146 166 VAL VAL A . n A 1 167 GLU 167 147 167 GLU GLU A . n A 1 168 CYS 168 148 168 CYS CYS A . n A 1 169 LEU 169 149 169 LEU LEU A . n A 1 170 ARG 170 150 170 ARG ARG A . n A 1 171 ARG 171 151 171 ARG ARG A . n A 1 172 ARG 172 152 172 ARG ARG A . n A 1 173 GLY 173 153 173 GLY GLY A . n A 1 174 LEU 174 154 174 LEU LEU A . n A 1 175 LYS 175 155 175 LYS LYS A . n A 1 176 VAL 176 156 176 VAL VAL A . n A 1 177 GLU 177 157 177 GLU GLU A . n A 1 178 ARG 178 158 178 ARG ARG A . n A 1 179 MET 179 159 179 MET MET A . n A 1 180 SER 180 160 180 SER SER A . n A 1 181 LYS 181 161 181 LYS LYS A . n A 1 182 THR 182 162 182 THR THR A . n A 1 183 VAL 183 163 183 VAL VAL A . n A 1 184 TYR 184 164 184 TYR TYR A . n A 1 185 THR 185 165 185 THR THR A . n A 1 186 VAL 186 166 186 VAL VAL A . n A 1 187 ASP 187 167 187 ASP ASP A . n A 1 188 TRP 188 168 188 TRP TRP A . n A 1 189 VAL 189 169 189 VAL VAL A . n A 1 190 PRO 190 170 190 PRO PRO A . n A 1 191 PRO 191 171 191 PRO PRO A . n A 1 192 GLU 192 172 192 GLU GLU A . n A 1 193 CYS 193 173 193 CYS CYS A . n A 1 194 ILE 194 174 194 ILE ILE A . n A 1 195 ALA 195 175 195 ALA ALA A . n A 1 196 GLU 196 176 196 GLU GLU A . n A 1 197 VAL 197 177 197 VAL VAL A . n A 1 198 ARG 198 178 198 ARG ARG A . n A 1 199 ARG 199 179 199 ARG ARG A . n A 1 200 GLU 200 180 200 GLU GLU A . n A 1 201 SER 201 181 201 SER SER A . n A 1 202 LEU 202 182 202 LEU LEU A . n A 1 203 GLY 203 183 203 GLY GLY A . n A 1 204 ARG 204 184 204 ARG ARG A . n A 1 205 SER 205 185 205 SER SER A . n A 1 206 LEU 206 186 206 LEU LEU A . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email shumans@mskcc.org _pdbx_contact_author.name_first Stewart _pdbx_contact_author.name_last Shuman _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-5034-6438 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HQG 1 301 301 HQG HQG A . C 3 NO3 1 302 302 NO3 NO3 A . D 4 GOL 1 303 303 GOL GOL A . E 4 GOL 1 304 307 GOL GOL A . F 3 NO3 1 305 310 NO3 NO3 A . G 3 NO3 1 306 311 NO3 NO3 A . H 5 PEG 1 307 312 PEG PEG A . I 6 K 1 308 1 K K A . J 7 HOH 1 401 121 HOH HOH A . J 7 HOH 2 402 94 HOH HOH A . J 7 HOH 3 403 157 HOH HOH A . J 7 HOH 4 404 80 HOH HOH A . J 7 HOH 5 405 122 HOH HOH A . J 7 HOH 6 406 126 HOH HOH A . J 7 HOH 7 407 61 HOH HOH A . J 7 HOH 8 408 168 HOH HOH A . J 7 HOH 9 409 83 HOH HOH A . J 7 HOH 10 410 196 HOH HOH A . J 7 HOH 11 411 89 HOH HOH A . J 7 HOH 12 412 84 HOH HOH A . J 7 HOH 13 413 100 HOH HOH A . J 7 HOH 14 414 31 HOH HOH A . J 7 HOH 15 415 12 HOH HOH A . J 7 HOH 16 416 142 HOH HOH A . J 7 HOH 17 417 32 HOH HOH A . J 7 HOH 18 418 33 HOH HOH A . J 7 HOH 19 419 81 HOH HOH A . J 7 HOH 20 420 111 HOH HOH A . J 7 HOH 21 421 200 HOH HOH A . J 7 HOH 22 422 154 HOH HOH A . J 7 HOH 23 423 148 HOH HOH A . J 7 HOH 24 424 137 HOH HOH A . J 7 HOH 25 425 123 HOH HOH A . J 7 HOH 26 426 36 HOH HOH A . J 7 HOH 27 427 174 HOH HOH A . J 7 HOH 28 428 199 HOH HOH A . J 7 HOH 29 429 16 HOH HOH A . J 7 HOH 30 430 190 HOH HOH A . J 7 HOH 31 431 113 HOH HOH A . J 7 HOH 32 432 86 HOH HOH A . J 7 HOH 33 433 144 HOH HOH A . J 7 HOH 34 434 41 HOH HOH A . J 7 HOH 35 435 43 HOH HOH A . J 7 HOH 36 436 98 HOH HOH A . J 7 HOH 37 437 55 HOH HOH A . J 7 HOH 38 438 60 HOH HOH A . J 7 HOH 39 439 58 HOH HOH A . J 7 HOH 40 440 59 HOH HOH A . J 7 HOH 41 441 13 HOH HOH A . J 7 HOH 42 442 56 HOH HOH A . J 7 HOH 43 443 72 HOH HOH A . J 7 HOH 44 444 8 HOH HOH A . J 7 HOH 45 445 42 HOH HOH A . J 7 HOH 46 446 95 HOH HOH A . J 7 HOH 47 447 187 HOH HOH A . J 7 HOH 48 448 73 HOH HOH A . J 7 HOH 49 449 106 HOH HOH A . J 7 HOH 50 450 77 HOH HOH A . J 7 HOH 51 451 104 HOH HOH A . J 7 HOH 52 452 202 HOH HOH A . J 7 HOH 53 453 9 HOH HOH A . J 7 HOH 54 454 151 HOH HOH A . J 7 HOH 55 455 34 HOH HOH A . J 7 HOH 56 456 23 HOH HOH A . J 7 HOH 57 457 49 HOH HOH A . J 7 HOH 58 458 35 HOH HOH A . J 7 HOH 59 459 110 HOH HOH A . J 7 HOH 60 460 186 HOH HOH A . J 7 HOH 61 461 105 HOH HOH A . J 7 HOH 62 462 101 HOH HOH A . J 7 HOH 63 463 51 HOH HOH A . J 7 HOH 64 464 117 HOH HOH A . J 7 HOH 65 465 39 HOH HOH A . J 7 HOH 66 466 62 HOH HOH A . J 7 HOH 67 467 167 HOH HOH A . J 7 HOH 68 468 19 HOH HOH A . J 7 HOH 69 469 124 HOH HOH A . J 7 HOH 70 470 22 HOH HOH A . J 7 HOH 71 471 26 HOH HOH A . J 7 HOH 72 472 115 HOH HOH A . J 7 HOH 73 473 118 HOH HOH A . J 7 HOH 74 474 4 HOH HOH A . J 7 HOH 75 475 38 HOH HOH A . J 7 HOH 76 476 3 HOH HOH A . J 7 HOH 77 477 74 HOH HOH A . J 7 HOH 78 478 169 HOH HOH A . J 7 HOH 79 479 136 HOH HOH A . J 7 HOH 80 480 163 HOH HOH A . J 7 HOH 81 481 201 HOH HOH A . J 7 HOH 82 482 11 HOH HOH A . J 7 HOH 83 483 147 HOH HOH A . J 7 HOH 84 484 79 HOH HOH A . J 7 HOH 85 485 65 HOH HOH A . J 7 HOH 86 486 87 HOH HOH A . J 7 HOH 87 487 160 HOH HOH A . J 7 HOH 88 488 2 HOH HOH A . J 7 HOH 89 489 48 HOH HOH A . J 7 HOH 90 490 40 HOH HOH A . J 7 HOH 91 491 191 HOH HOH A . J 7 HOH 92 492 158 HOH HOH A . J 7 HOH 93 493 10 HOH HOH A . J 7 HOH 94 494 102 HOH HOH A . J 7 HOH 95 495 76 HOH HOH A . J 7 HOH 96 496 18 HOH HOH A . J 7 HOH 97 497 161 HOH HOH A . J 7 HOH 98 498 37 HOH HOH A . J 7 HOH 99 499 193 HOH HOH A . J 7 HOH 100 500 91 HOH HOH A . J 7 HOH 101 501 21 HOH HOH A . J 7 HOH 102 502 25 HOH HOH A . J 7 HOH 103 503 68 HOH HOH A . J 7 HOH 104 504 152 HOH HOH A . J 7 HOH 105 505 20 HOH HOH A . J 7 HOH 106 506 67 HOH HOH A . J 7 HOH 107 507 30 HOH HOH A . J 7 HOH 108 508 103 HOH HOH A . J 7 HOH 109 509 109 HOH HOH A . J 7 HOH 110 510 52 HOH HOH A . J 7 HOH 111 511 185 HOH HOH A . J 7 HOH 112 512 172 HOH HOH A . J 7 HOH 113 513 53 HOH HOH A . J 7 HOH 114 514 178 HOH HOH A . J 7 HOH 115 515 188 HOH HOH A . J 7 HOH 116 516 175 HOH HOH A . J 7 HOH 117 517 107 HOH HOH A . J 7 HOH 118 518 153 HOH HOH A . J 7 HOH 119 519 71 HOH HOH A . J 7 HOH 120 520 173 HOH HOH A . J 7 HOH 121 521 54 HOH HOH A . J 7 HOH 122 522 180 HOH HOH A . J 7 HOH 123 523 127 HOH HOH A . J 7 HOH 124 524 119 HOH HOH A . J 7 HOH 125 525 97 HOH HOH A . J 7 HOH 126 526 78 HOH HOH A . J 7 HOH 127 527 128 HOH HOH A . J 7 HOH 128 528 207 HOH HOH A . J 7 HOH 129 529 179 HOH HOH A . J 7 HOH 130 530 184 HOH HOH A . J 7 HOH 131 531 114 HOH HOH A . J 7 HOH 132 532 198 HOH HOH A . J 7 HOH 133 533 195 HOH HOH A . J 7 HOH 134 534 182 HOH HOH A . J 7 HOH 135 535 192 HOH HOH A . J 7 HOH 136 536 14 HOH HOH A . J 7 HOH 137 537 50 HOH HOH A . J 7 HOH 138 538 116 HOH HOH A . J 7 HOH 139 539 162 HOH HOH A . J 7 HOH 140 540 125 HOH HOH A . J 7 HOH 141 541 197 HOH HOH A . J 7 HOH 142 542 156 HOH HOH A . J 7 HOH 143 543 131 HOH HOH A . J 7 HOH 144 544 209 HOH HOH A . J 7 HOH 145 545 194 HOH HOH A . J 7 HOH 146 546 64 HOH HOH A . J 7 HOH 147 547 90 HOH HOH A . J 7 HOH 148 548 189 HOH HOH A . J 7 HOH 149 549 206 HOH HOH A . J 7 HOH 150 550 149 HOH HOH A . J 7 HOH 151 551 15 HOH HOH A . J 7 HOH 152 552 150 HOH HOH A . J 7 HOH 153 553 208 HOH HOH A . J 7 HOH 154 554 129 HOH HOH A . J 7 HOH 155 555 75 HOH HOH A . J 7 HOH 156 556 57 HOH HOH A . J 7 HOH 157 557 143 HOH HOH A . J 7 HOH 158 558 134 HOH HOH A . J 7 HOH 159 559 138 HOH HOH A . J 7 HOH 160 560 6 HOH HOH A . J 7 HOH 161 561 47 HOH HOH A . J 7 HOH 162 562 177 HOH HOH A . J 7 HOH 163 563 112 HOH HOH A . J 7 HOH 164 564 24 HOH HOH A . J 7 HOH 165 565 69 HOH HOH A . J 7 HOH 166 566 205 HOH HOH A . J 7 HOH 167 567 108 HOH HOH A . J 7 HOH 168 568 204 HOH HOH A . J 7 HOH 169 569 70 HOH HOH A . J 7 HOH 170 570 63 HOH HOH A . J 7 HOH 171 571 176 HOH HOH A . J 7 HOH 172 572 203 HOH HOH A . J 7 HOH 173 573 164 HOH HOH A . J 7 HOH 174 574 170 HOH HOH A . J 7 HOH 175 575 132 HOH HOH A . J 7 HOH 176 576 85 HOH HOH A . J 7 HOH 177 577 92 HOH HOH A . J 7 HOH 178 578 5 HOH HOH A . J 7 HOH 179 579 140 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id O _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id J _pdbx_struct_conn_angle.ptnr1_label_comp_id HOH _pdbx_struct_conn_angle.ptnr1_label_seq_id . _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id A _pdbx_struct_conn_angle.ptnr1_auth_comp_id HOH _pdbx_struct_conn_angle.ptnr1_auth_seq_id 420 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id K _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id I _pdbx_struct_conn_angle.ptnr2_label_comp_id K _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id A _pdbx_struct_conn_angle.ptnr2_auth_comp_id K _pdbx_struct_conn_angle.ptnr2_auth_seq_id 308 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id O _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id J _pdbx_struct_conn_angle.ptnr3_label_comp_id HOH _pdbx_struct_conn_angle.ptnr3_label_seq_id . _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id A _pdbx_struct_conn_angle.ptnr3_auth_comp_id HOH _pdbx_struct_conn_angle.ptnr3_auth_seq_id 496 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 99.3 _pdbx_struct_conn_angle.value_esd ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -x,y+1/2,-z # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NZ A LYS 41 ? ? O A HOH 401 ? ? 2.05 2 1 O A HOH 554 ? ? O A HOH 555 ? ? 2.06 3 1 O A HOH 494 ? ? O A HOH 516 ? ? 2.18 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 425 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 564 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 1_655 _pdbx_validate_symm_contact.dist 2.05 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 15 ? ? -130.21 -43.16 2 1 HIS A 16 ? ? -142.89 58.71 3 1 TRP A 168 ? ? -172.06 148.17 4 1 ARG A 184 ? ? -38.90 127.92 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG A 4 ? ? 0.079 'SIDE CHAIN' 2 1 ARG A 115 ? ? 0.077 'SIDE CHAIN' 3 1 ARG A 184 ? ? 0.100 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -19 ? A MET 1 2 1 Y 1 A GLY -18 ? A GLY 2 3 1 Y 1 A SER -17 ? A SER 3 4 1 Y 1 A SER -16 ? A SER 4 5 1 Y 1 A HIS -15 ? A HIS 5 6 1 Y 1 A HIS -14 ? A HIS 6 7 1 Y 1 A HIS -13 ? A HIS 7 8 1 Y 1 A HIS -12 ? A HIS 8 9 1 Y 1 A HIS -11 ? A HIS 9 10 1 Y 1 A HIS -10 ? A HIS 10 11 1 Y 1 A SER -9 ? A SER 11 12 1 Y 1 A SER -8 ? A SER 12 13 1 Y 1 A GLY -7 ? A GLY 13 14 1 Y 1 A LEU -6 ? A LEU 14 15 1 Y 1 A VAL -5 ? A VAL 15 16 1 Y 1 A PRO -4 ? A PRO 16 17 1 Y 1 A ARG -3 ? A ARG 17 18 1 Y 1 A GLY -2 ? A GLY 18 19 1 Y 1 A SER -1 ? A SER 19 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLU N N N N 88 GLU CA C N S 89 GLU C C N N 90 GLU O O N N 91 GLU CB C N N 92 GLU CG C N N 93 GLU CD C N N 94 GLU OE1 O N N 95 GLU OE2 O N N 96 GLU OXT O N N 97 GLU H H N N 98 GLU H2 H N N 99 GLU HA H N N 100 GLU HB2 H N N 101 GLU HB3 H N N 102 GLU HG2 H N N 103 GLU HG3 H N N 104 GLU HE2 H N N 105 GLU HXT H N N 106 GLY N N N N 107 GLY CA C N N 108 GLY C C N N 109 GLY O O N N 110 GLY OXT O N N 111 GLY H H N N 112 GLY H2 H N N 113 GLY HA2 H N N 114 GLY HA3 H N N 115 GLY HXT H N N 116 GOL C1 C N N 117 GOL O1 O N N 118 GOL C2 C N N 119 GOL O2 O N N 120 GOL C3 C N N 121 GOL O3 O N N 122 GOL H11 H N N 123 GOL H12 H N N 124 GOL HO1 H N N 125 GOL H2 H N N 126 GOL HO2 H N N 127 GOL H31 H N N 128 GOL H32 H N N 129 GOL HO3 H N N 130 HIS N N N N 131 HIS CA C N S 132 HIS C C N N 133 HIS O O N N 134 HIS CB C N N 135 HIS CG C Y N 136 HIS ND1 N Y N 137 HIS CD2 C Y N 138 HIS CE1 C Y N 139 HIS NE2 N Y N 140 HIS OXT O N N 141 HIS H H N N 142 HIS H2 H N N 143 HIS HA H N N 144 HIS HB2 H N N 145 HIS HB3 H N N 146 HIS HD1 H N N 147 HIS HD2 H N N 148 HIS HE1 H N N 149 HIS HE2 H N N 150 HIS HXT H N N 151 HOH O O N N 152 HOH H1 H N N 153 HOH H2 H N N 154 HQG C1B C N R 155 HQG C1D C N R 156 HQG C2A C Y N 157 HQG C2B C N R 158 HQG C2D C N R 159 HQG C3B C N S 160 HQG C3D C N S 161 HQG C4A C Y N 162 HQG C4B C N R 163 HQG C4D C N R 164 HQG C5A C Y N 165 HQG C5B C N N 166 HQG C5D C N N 167 HQG C6A C Y N 168 HQG C8A C Y N 169 HQG N1A N Y N 170 HQG N3A N Y N 171 HQG N6A N N N 172 HQG N7A N Y N 173 HQG N9A N Y N 174 HQG O1A O N N 175 HQG O1N O N N 176 HQG O1Z O N N 177 HQG O2A O N N 178 HQG O2B O N N 179 HQG O2D O N N 180 HQG O2N O N N 181 HQG O2Z O N N 182 HQG O3 O N N 183 HQG O3B O N N 184 HQG O3D O N N 185 HQG O3Z O N N 186 HQG O4B O N N 187 HQG O4D O N N 188 HQG O4Z O N N 189 HQG O5B O N N 190 HQG O5D O N N 191 HQG PA P N N 192 HQG PN P N N 193 HQG PZ P N N 194 HQG H1 H N N 195 HQG H2 H N N 196 HQG H3 H N N 197 HQG H4 H N N 198 HQG H5 H N N 199 HQG H6 H N N 200 HQG H7 H N N 201 HQG H8 H N N 202 HQG H9 H N N 203 HQG H10 H N N 204 HQG H11 H N N 205 HQG H12 H N N 206 HQG H13 H N N 207 HQG H14 H N N 208 HQG H15 H N N 209 HQG H16 H N N 210 HQG H17 H N N 211 HQG H18 H N N 212 HQG H19 H N N 213 HQG H20 H N N 214 HQG H21 H N N 215 HQG H22 H N N 216 HQG H23 H N N 217 HQG H24 H N N 218 ILE N N N N 219 ILE CA C N S 220 ILE C C N N 221 ILE O O N N 222 ILE CB C N S 223 ILE CG1 C N N 224 ILE CG2 C N N 225 ILE CD1 C N N 226 ILE OXT O N N 227 ILE H H N N 228 ILE H2 H N N 229 ILE HA H N N 230 ILE HB H N N 231 ILE HG12 H N N 232 ILE HG13 H N N 233 ILE HG21 H N N 234 ILE HG22 H N N 235 ILE HG23 H N N 236 ILE HD11 H N N 237 ILE HD12 H N N 238 ILE HD13 H N N 239 ILE HXT H N N 240 K K K N N 241 LEU N N N N 242 LEU CA C N S 243 LEU C C N N 244 LEU O O N N 245 LEU CB C N N 246 LEU CG C N N 247 LEU CD1 C N N 248 LEU CD2 C N N 249 LEU OXT O N N 250 LEU H H N N 251 LEU H2 H N N 252 LEU HA H N N 253 LEU HB2 H N N 254 LEU HB3 H N N 255 LEU HG H N N 256 LEU HD11 H N N 257 LEU HD12 H N N 258 LEU HD13 H N N 259 LEU HD21 H N N 260 LEU HD22 H N N 261 LEU HD23 H N N 262 LEU HXT H N N 263 LYS N N N N 264 LYS CA C N S 265 LYS C C N N 266 LYS O O N N 267 LYS CB C N N 268 LYS CG C N N 269 LYS CD C N N 270 LYS CE C N N 271 LYS NZ N N N 272 LYS OXT O N N 273 LYS H H N N 274 LYS H2 H N N 275 LYS HA H N N 276 LYS HB2 H N N 277 LYS HB3 H N N 278 LYS HG2 H N N 279 LYS HG3 H N N 280 LYS HD2 H N N 281 LYS HD3 H N N 282 LYS HE2 H N N 283 LYS HE3 H N N 284 LYS HZ1 H N N 285 LYS HZ2 H N N 286 LYS HZ3 H N N 287 LYS HXT H N N 288 MET N N N N 289 MET CA C N S 290 MET C C N N 291 MET O O N N 292 MET CB C N N 293 MET CG C N N 294 MET SD S N N 295 MET CE C N N 296 MET OXT O N N 297 MET H H N N 298 MET H2 H N N 299 MET HA H N N 300 MET HB2 H N N 301 MET HB3 H N N 302 MET HG2 H N N 303 MET HG3 H N N 304 MET HE1 H N N 305 MET HE2 H N N 306 MET HE3 H N N 307 MET HXT H N N 308 NO3 N N N N 309 NO3 O1 O N N 310 NO3 O2 O N N 311 NO3 O3 O N N 312 PEG C1 C N N 313 PEG O1 O N N 314 PEG C2 C N N 315 PEG O2 O N N 316 PEG C3 C N N 317 PEG C4 C N N 318 PEG O4 O N N 319 PEG H11 H N N 320 PEG H12 H N N 321 PEG HO1 H N N 322 PEG H21 H N N 323 PEG H22 H N N 324 PEG H31 H N N 325 PEG H32 H N N 326 PEG H41 H N N 327 PEG H42 H N N 328 PEG HO4 H N N 329 PRO N N N N 330 PRO CA C N S 331 PRO C C N N 332 PRO O O N N 333 PRO CB C N N 334 PRO CG C N N 335 PRO CD C N N 336 PRO OXT O N N 337 PRO H H N N 338 PRO HA H N N 339 PRO HB2 H N N 340 PRO HB3 H N N 341 PRO HG2 H N N 342 PRO HG3 H N N 343 PRO HD2 H N N 344 PRO HD3 H N N 345 PRO HXT H N N 346 SER N N N N 347 SER CA C N S 348 SER C C N N 349 SER O O N N 350 SER CB C N N 351 SER OG O N N 352 SER OXT O N N 353 SER H H N N 354 SER H2 H N N 355 SER HA H N N 356 SER HB2 H N N 357 SER HB3 H N N 358 SER HG H N N 359 SER HXT H N N 360 THR N N N N 361 THR CA C N S 362 THR C C N N 363 THR O O N N 364 THR CB C N R 365 THR OG1 O N N 366 THR CG2 C N N 367 THR OXT O N N 368 THR H H N N 369 THR H2 H N N 370 THR HA H N N 371 THR HB H N N 372 THR HG1 H N N 373 THR HG21 H N N 374 THR HG22 H N N 375 THR HG23 H N N 376 THR HXT H N N 377 TRP N N N N 378 TRP CA C N S 379 TRP C C N N 380 TRP O O N N 381 TRP CB C N N 382 TRP CG C Y N 383 TRP CD1 C Y N 384 TRP CD2 C Y N 385 TRP NE1 N Y N 386 TRP CE2 C Y N 387 TRP CE3 C Y N 388 TRP CZ2 C Y N 389 TRP CZ3 C Y N 390 TRP CH2 C Y N 391 TRP OXT O N N 392 TRP H H N N 393 TRP H2 H N N 394 TRP HA H N N 395 TRP HB2 H N N 396 TRP HB3 H N N 397 TRP HD1 H N N 398 TRP HE1 H N N 399 TRP HE3 H N N 400 TRP HZ2 H N N 401 TRP HZ3 H N N 402 TRP HH2 H N N 403 TRP HXT H N N 404 TYR N N N N 405 TYR CA C N S 406 TYR C C N N 407 TYR O O N N 408 TYR CB C N N 409 TYR CG C Y N 410 TYR CD1 C Y N 411 TYR CD2 C Y N 412 TYR CE1 C Y N 413 TYR CE2 C Y N 414 TYR CZ C Y N 415 TYR OH O N N 416 TYR OXT O N N 417 TYR H H N N 418 TYR H2 H N N 419 TYR HA H N N 420 TYR HB2 H N N 421 TYR HB3 H N N 422 TYR HD1 H N N 423 TYR HD2 H N N 424 TYR HE1 H N N 425 TYR HE2 H N N 426 TYR HH H N N 427 TYR HXT H N N 428 VAL N N N N 429 VAL CA C N S 430 VAL C C N N 431 VAL O O N N 432 VAL CB C N N 433 VAL CG1 C N N 434 VAL CG2 C N N 435 VAL OXT O N N 436 VAL H H N N 437 VAL H2 H N N 438 VAL HA H N N 439 VAL HB H N N 440 VAL HG11 H N N 441 VAL HG12 H N N 442 VAL HG13 H N N 443 VAL HG21 H N N 444 VAL HG22 H N N 445 VAL HG23 H N N 446 VAL HXT H N N 447 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLU N CA sing N N 83 GLU N H sing N N 84 GLU N H2 sing N N 85 GLU CA C sing N N 86 GLU CA CB sing N N 87 GLU CA HA sing N N 88 GLU C O doub N N 89 GLU C OXT sing N N 90 GLU CB CG sing N N 91 GLU CB HB2 sing N N 92 GLU CB HB3 sing N N 93 GLU CG CD sing N N 94 GLU CG HG2 sing N N 95 GLU CG HG3 sing N N 96 GLU CD OE1 doub N N 97 GLU CD OE2 sing N N 98 GLU OE2 HE2 sing N N 99 GLU OXT HXT sing N N 100 GLY N CA sing N N 101 GLY N H sing N N 102 GLY N H2 sing N N 103 GLY CA C sing N N 104 GLY CA HA2 sing N N 105 GLY CA HA3 sing N N 106 GLY C O doub N N 107 GLY C OXT sing N N 108 GLY OXT HXT sing N N 109 GOL C1 O1 sing N N 110 GOL C1 C2 sing N N 111 GOL C1 H11 sing N N 112 GOL C1 H12 sing N N 113 GOL O1 HO1 sing N N 114 GOL C2 O2 sing N N 115 GOL C2 C3 sing N N 116 GOL C2 H2 sing N N 117 GOL O2 HO2 sing N N 118 GOL C3 O3 sing N N 119 GOL C3 H31 sing N N 120 GOL C3 H32 sing N N 121 GOL O3 HO3 sing N N 122 HIS N CA sing N N 123 HIS N H sing N N 124 HIS N H2 sing N N 125 HIS CA C sing N N 126 HIS CA CB sing N N 127 HIS CA HA sing N N 128 HIS C O doub N N 129 HIS C OXT sing N N 130 HIS CB CG sing N N 131 HIS CB HB2 sing N N 132 HIS CB HB3 sing N N 133 HIS CG ND1 sing Y N 134 HIS CG CD2 doub Y N 135 HIS ND1 CE1 doub Y N 136 HIS ND1 HD1 sing N N 137 HIS CD2 NE2 sing Y N 138 HIS CD2 HD2 sing N N 139 HIS CE1 NE2 sing Y N 140 HIS CE1 HE1 sing N N 141 HIS NE2 HE2 sing N N 142 HIS OXT HXT sing N N 143 HOH O H1 sing N N 144 HOH O H2 sing N N 145 HQG N1A C2A doub Y N 146 HQG N1A C6A sing Y N 147 HQG C2A N3A sing Y N 148 HQG N6A C6A sing N N 149 HQG N3A C4A doub Y N 150 HQG C6A C5A doub Y N 151 HQG C4A C5A sing Y N 152 HQG C4A N9A sing Y N 153 HQG C5A N7A sing Y N 154 HQG O4B C1B sing N N 155 HQG O4B C4B sing N N 156 HQG N9A C1B sing N N 157 HQG N9A C8A sing Y N 158 HQG N7A C8A doub Y N 159 HQG C1B C2B sing N N 160 HQG C4B C5B sing N N 161 HQG C4B C3B sing N N 162 HQG C5B O5B sing N N 163 HQG O3B C3B sing N N 164 HQG O5B PA sing N N 165 HQG C2B C3B sing N N 166 HQG C2B O2B sing N N 167 HQG O2A PA doub N N 168 HQG PA O1A sing N N 169 HQG PA O3 sing N N 170 HQG O3 PN sing N N 171 HQG O2N PN doub N N 172 HQG PN O1N sing N N 173 HQG PN O5D sing N N 174 HQG O5D C5D sing N N 175 HQG C5D C4D sing N N 176 HQG O4D C4D sing N N 177 HQG O4D C1D sing N N 178 HQG C4D C3D sing N N 179 HQG O1Z PZ doub N N 180 HQG C1D C2D sing N N 181 HQG C1D O4Z sing N N 182 HQG C2D C3D sing N N 183 HQG C2D O2D sing N N 184 HQG C3D O3D sing N N 185 HQG O4Z PZ sing N N 186 HQG PZ O2Z sing N N 187 HQG PZ O3Z sing N N 188 HQG C1B H1 sing N N 189 HQG C1D H2 sing N N 190 HQG C2A H3 sing N N 191 HQG C2B H4 sing N N 192 HQG C2D H5 sing N N 193 HQG C3B H6 sing N N 194 HQG C3D H7 sing N N 195 HQG C4B H8 sing N N 196 HQG C4D H9 sing N N 197 HQG C5B H10 sing N N 198 HQG C5B H11 sing N N 199 HQG C5D H12 sing N N 200 HQG C5D H13 sing N N 201 HQG C8A H14 sing N N 202 HQG N6A H15 sing N N 203 HQG N6A H16 sing N N 204 HQG O1A H17 sing N N 205 HQG O1N H18 sing N N 206 HQG O2B H19 sing N N 207 HQG O2D H20 sing N N 208 HQG O2Z H21 sing N N 209 HQG O3B H22 sing N N 210 HQG O3D H23 sing N N 211 HQG O3Z H24 sing N N 212 ILE N CA sing N N 213 ILE N H sing N N 214 ILE N H2 sing N N 215 ILE CA C sing N N 216 ILE CA CB sing N N 217 ILE CA HA sing N N 218 ILE C O doub N N 219 ILE C OXT sing N N 220 ILE CB CG1 sing N N 221 ILE CB CG2 sing N N 222 ILE CB HB sing N N 223 ILE CG1 CD1 sing N N 224 ILE CG1 HG12 sing N N 225 ILE CG1 HG13 sing N N 226 ILE CG2 HG21 sing N N 227 ILE CG2 HG22 sing N N 228 ILE CG2 HG23 sing N N 229 ILE CD1 HD11 sing N N 230 ILE CD1 HD12 sing N N 231 ILE CD1 HD13 sing N N 232 ILE OXT HXT sing N N 233 LEU N CA sing N N 234 LEU N H sing N N 235 LEU N H2 sing N N 236 LEU CA C sing N N 237 LEU CA CB sing N N 238 LEU CA HA sing N N 239 LEU C O doub N N 240 LEU C OXT sing N N 241 LEU CB CG sing N N 242 LEU CB HB2 sing N N 243 LEU CB HB3 sing N N 244 LEU CG CD1 sing N N 245 LEU CG CD2 sing N N 246 LEU CG HG sing N N 247 LEU CD1 HD11 sing N N 248 LEU CD1 HD12 sing N N 249 LEU CD1 HD13 sing N N 250 LEU CD2 HD21 sing N N 251 LEU CD2 HD22 sing N N 252 LEU CD2 HD23 sing N N 253 LEU OXT HXT sing N N 254 LYS N CA sing N N 255 LYS N H sing N N 256 LYS N H2 sing N N 257 LYS CA C sing N N 258 LYS CA CB sing N N 259 LYS CA HA sing N N 260 LYS C O doub N N 261 LYS C OXT sing N N 262 LYS CB CG sing N N 263 LYS CB HB2 sing N N 264 LYS CB HB3 sing N N 265 LYS CG CD sing N N 266 LYS CG HG2 sing N N 267 LYS CG HG3 sing N N 268 LYS CD CE sing N N 269 LYS CD HD2 sing N N 270 LYS CD HD3 sing N N 271 LYS CE NZ sing N N 272 LYS CE HE2 sing N N 273 LYS CE HE3 sing N N 274 LYS NZ HZ1 sing N N 275 LYS NZ HZ2 sing N N 276 LYS NZ HZ3 sing N N 277 LYS OXT HXT sing N N 278 MET N CA sing N N 279 MET N H sing N N 280 MET N H2 sing N N 281 MET CA C sing N N 282 MET CA CB sing N N 283 MET CA HA sing N N 284 MET C O doub N N 285 MET C OXT sing N N 286 MET CB CG sing N N 287 MET CB HB2 sing N N 288 MET CB HB3 sing N N 289 MET CG SD sing N N 290 MET CG HG2 sing N N 291 MET CG HG3 sing N N 292 MET SD CE sing N N 293 MET CE HE1 sing N N 294 MET CE HE2 sing N N 295 MET CE HE3 sing N N 296 MET OXT HXT sing N N 297 NO3 N O1 doub N N 298 NO3 N O2 sing N N 299 NO3 N O3 sing N N 300 PEG C1 O1 sing N N 301 PEG C1 C2 sing N N 302 PEG C1 H11 sing N N 303 PEG C1 H12 sing N N 304 PEG O1 HO1 sing N N 305 PEG C2 O2 sing N N 306 PEG C2 H21 sing N N 307 PEG C2 H22 sing N N 308 PEG O2 C3 sing N N 309 PEG C3 C4 sing N N 310 PEG C3 H31 sing N N 311 PEG C3 H32 sing N N 312 PEG C4 O4 sing N N 313 PEG C4 H41 sing N N 314 PEG C4 H42 sing N N 315 PEG O4 HO4 sing N N 316 PRO N CA sing N N 317 PRO N CD sing N N 318 PRO N H sing N N 319 PRO CA C sing N N 320 PRO CA CB sing N N 321 PRO CA HA sing N N 322 PRO C O doub N N 323 PRO C OXT sing N N 324 PRO CB CG sing N N 325 PRO CB HB2 sing N N 326 PRO CB HB3 sing N N 327 PRO CG CD sing N N 328 PRO CG HG2 sing N N 329 PRO CG HG3 sing N N 330 PRO CD HD2 sing N N 331 PRO CD HD3 sing N N 332 PRO OXT HXT sing N N 333 SER N CA sing N N 334 SER N H sing N N 335 SER N H2 sing N N 336 SER CA C sing N N 337 SER CA CB sing N N 338 SER CA HA sing N N 339 SER C O doub N N 340 SER C OXT sing N N 341 SER CB OG sing N N 342 SER CB HB2 sing N N 343 SER CB HB3 sing N N 344 SER OG HG sing N N 345 SER OXT HXT sing N N 346 THR N CA sing N N 347 THR N H sing N N 348 THR N H2 sing N N 349 THR CA C sing N N 350 THR CA CB sing N N 351 THR CA HA sing N N 352 THR C O doub N N 353 THR C OXT sing N N 354 THR CB OG1 sing N N 355 THR CB CG2 sing N N 356 THR CB HB sing N N 357 THR OG1 HG1 sing N N 358 THR CG2 HG21 sing N N 359 THR CG2 HG22 sing N N 360 THR CG2 HG23 sing N N 361 THR OXT HXT sing N N 362 TRP N CA sing N N 363 TRP N H sing N N 364 TRP N H2 sing N N 365 TRP CA C sing N N 366 TRP CA CB sing N N 367 TRP CA HA sing N N 368 TRP C O doub N N 369 TRP C OXT sing N N 370 TRP CB CG sing N N 371 TRP CB HB2 sing N N 372 TRP CB HB3 sing N N 373 TRP CG CD1 doub Y N 374 TRP CG CD2 sing Y N 375 TRP CD1 NE1 sing Y N 376 TRP CD1 HD1 sing N N 377 TRP CD2 CE2 doub Y N 378 TRP CD2 CE3 sing Y N 379 TRP NE1 CE2 sing Y N 380 TRP NE1 HE1 sing N N 381 TRP CE2 CZ2 sing Y N 382 TRP CE3 CZ3 doub Y N 383 TRP CE3 HE3 sing N N 384 TRP CZ2 CH2 doub Y N 385 TRP CZ2 HZ2 sing N N 386 TRP CZ3 CH2 sing Y N 387 TRP CZ3 HZ3 sing N N 388 TRP CH2 HH2 sing N N 389 TRP OXT HXT sing N N 390 TYR N CA sing N N 391 TYR N H sing N N 392 TYR N H2 sing N N 393 TYR CA C sing N N 394 TYR CA CB sing N N 395 TYR CA HA sing N N 396 TYR C O doub N N 397 TYR C OXT sing N N 398 TYR CB CG sing N N 399 TYR CB HB2 sing N N 400 TYR CB HB3 sing N N 401 TYR CG CD1 doub Y N 402 TYR CG CD2 sing Y N 403 TYR CD1 CE1 sing Y N 404 TYR CD1 HD1 sing N N 405 TYR CD2 CE2 doub Y N 406 TYR CD2 HD2 sing N N 407 TYR CE1 CZ doub Y N 408 TYR CE1 HE1 sing N N 409 TYR CE2 CZ sing Y N 410 TYR CE2 HE2 sing N N 411 TYR CZ OH sing N N 412 TYR OH HH sing N N 413 TYR OXT HXT sing N N 414 VAL N CA sing N N 415 VAL N H sing N N 416 VAL N H2 sing N N 417 VAL CA C sing N N 418 VAL CA CB sing N N 419 VAL CA HA sing N N 420 VAL C O doub N N 421 VAL C OXT sing N N 422 VAL CB CG1 sing N N 423 VAL CB CG2 sing N N 424 VAL CB HB sing N N 425 VAL CG1 HG11 sing N N 426 VAL CG1 HG12 sing N N 427 VAL CG1 HG13 sing N N 428 VAL CG2 HG21 sing N N 429 VAL CG2 HG22 sing N N 430 VAL CG2 HG23 sing N N 431 VAL OXT HXT sing N N 432 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' R35-GM126945 1 'Department of Energy (DOE, United States)' 'United States' DE-AC02-06CH11357 2 'Department of Energy (DOE, United States)' 'United States' DE-SC0012704 3 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' P30-GM124165 4 'Other government' 'United States' HEI-S10OD021527 5 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-3,4-bis(oxidanyl)-5-phosphonooxy-oxolan-2-yl]methyl hydrogen phosphate ; HQG 3 'NITRATE ION' NO3 4 GLYCEROL GOL 5 'DI(HYDROXYETHYL)ETHER' PEG 6 'POTASSIUM ION' K 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1WFX _pdbx_initial_refinement_model.details '1WFX model (A.pernix Tpt1 at 2.8A) was used for isomorphous replacement' # _space_group.name_H-M_alt 'P 1 21 1' _space_group.name_Hall 'P 2yb' _space_group.IT_number 4 _space_group.crystal_system monoclinic _space_group.id 1 #