HEADER SIGNALING PROTEIN/PROTEIN BINDING 25-JUL-23 8TK9 TITLE ZIG-4-INS-6 COMPLEX, TETRAGONAL FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZWEI IG DOMAIN PROTEIN ZIG-4; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: PROBABLE INSULIN-LIKE PEPTIDE BETA-TYPE 5; COMPND 7 CHAIN: B; COMPND 8 SYNONYM: INS-6; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 3 ORGANISM_TAXID: 6239; SOURCE 4 GENE: ZIG-4; SOURCE 5 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 7 EXPRESSION_SYSTEM_CELL_LINE: HIGH FIVE CELLS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 11 ORGANISM_TAXID: 6239; SOURCE 12 GENE: INS-6; SOURCE 13 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 15 EXPRESSION_SYSTEM_CELL_LINE: HIGH FIVE CELLS; SOURCE 16 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS NEUROPEPTIDE, SIGNALING PROTEIN, PROTEIN BINDING, SIGNALING PROTEIN- KEYWDS 2 PROTEIN BINDING COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.CHENG,E.BALTRUSAITIS,Z.AZIZ,W.I.NAWROCKA,E.OZKAN REVDAT 2 16-OCT-24 8TK9 1 JRNL REVDAT 1 28-AUG-24 8TK9 0 JRNL AUTH W.I.NAWROCKA,S.CHENG,B.HAO,M.C.ROSEN,E.CORTES, JRNL AUTH 2 E.E.BALTRUSAITIS,Z.AZIZ,I.A.KOVACS,E.OZKAN JRNL TITL NEMATODE EXTRACELLULAR PROTEIN INTERACTOME EXPANDS JRNL TITL 2 CONNECTIONS BETWEEN SIGNALING PATHWAYS. JRNL REF BIORXIV 2024 JRNL REFN ISSN 2692-8205 JRNL PMID 39026773 JRNL DOI 10.1101/2024.07.08.602367 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21RC1_5015 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.28 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 73784 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.146 REMARK 3 R VALUE (WORKING SET) : 0.145 REMARK 3 FREE R VALUE : 0.169 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 3747 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.2800 - 3.9100 1.00 2849 150 0.1624 0.1673 REMARK 3 2 3.9100 - 3.1100 1.00 2705 126 0.1487 0.1497 REMARK 3 3 3.1000 - 2.7100 1.00 2677 145 0.1617 0.1786 REMARK 3 4 2.7100 - 2.4600 1.00 2644 132 0.1479 0.1799 REMARK 3 5 2.4600 - 2.2900 1.00 2652 121 0.1379 0.1670 REMARK 3 6 2.2900 - 2.1500 1.00 2613 135 0.1269 0.1734 REMARK 3 7 2.1500 - 2.0500 1.00 2608 155 0.1238 0.1493 REMARK 3 8 2.0500 - 1.9600 0.99 2565 142 0.1204 0.1535 REMARK 3 9 1.9600 - 1.8800 1.00 2605 142 0.1184 0.1581 REMARK 3 10 1.8800 - 1.8200 1.00 2556 153 0.1281 0.1655 REMARK 3 11 1.8200 - 1.7600 1.00 2601 143 0.1241 0.1538 REMARK 3 12 1.7600 - 1.7100 1.00 2579 138 0.1140 0.1506 REMARK 3 13 1.7100 - 1.6600 1.00 2577 148 0.1100 0.1592 REMARK 3 14 1.6600 - 1.6200 1.00 2548 159 0.1060 0.1518 REMARK 3 15 1.6200 - 1.5900 1.00 2562 145 0.1046 0.1573 REMARK 3 16 1.5900 - 1.5500 1.00 2553 142 0.1124 0.1916 REMARK 3 17 1.5500 - 1.5200 1.00 2592 130 0.1279 0.1572 REMARK 3 18 1.5200 - 1.4900 1.00 2604 128 0.1387 0.2253 REMARK 3 19 1.4900 - 1.4700 1.00 2550 129 0.1488 0.1857 REMARK 3 20 1.4700 - 1.4400 1.00 2601 130 0.1643 0.2311 REMARK 3 21 1.4400 - 1.4200 0.99 2528 137 0.1630 0.1704 REMARK 3 22 1.4200 - 1.4000 1.00 2571 139 0.1767 0.1949 REMARK 3 23 1.4000 - 1.3800 1.00 2546 135 0.1768 0.2353 REMARK 3 24 1.3800 - 1.3600 1.00 2539 136 0.1882 0.2256 REMARK 3 25 1.3600 - 1.3400 1.00 2567 137 0.2118 0.2563 REMARK 3 26 1.3400 - 1.3200 1.00 2559 137 0.2281 0.2743 REMARK 3 27 1.3200 - 1.3000 0.97 2486 133 0.2719 0.3158 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.126 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 14.952 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.37 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 2190 REMARK 3 ANGLE : 1.291 3001 REMARK 3 CHIRALITY : 0.109 338 REMARK 3 PLANARITY : 0.010 402 REMARK 3 DIHEDRAL : 17.390 803 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8TK9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1000276127. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-OCT-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20190806 REMARK 200 DATA SCALING SOFTWARE : XDS 20190806 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 73877 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 200.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : 0.04600 REMARK 200 R SYM (I) : 0.04600 REMARK 200 FOR THE DATA SET : 24.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 12.20 REMARK 200 R MERGE FOR SHELL (I) : 1.20100 REMARK 200 R SYM FOR SHELL (I) : 1.20100 REMARK 200 FOR SHELL : 1.780 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M NACL, 0.1 M SODIUM CACODYLATE, REMARK 280 PH 6.5, 2 M (NH4)2SO4, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.52900 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 37.26400 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 37.26400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 26.76450 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 37.26400 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 37.26400 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 80.29350 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 37.26400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.26400 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 26.76450 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 37.26400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.26400 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 80.29350 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 53.52900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 41 REMARK 465 SER A 42 REMARK 465 ALA A 151 REMARK 465 SER A 152 REMARK 465 SER A 156 REMARK 465 ASN A 157 REMARK 465 HIS A 251 REMARK 465 HIS A 252 REMARK 465 HIS A 253 REMARK 465 HIS A 254 REMARK 465 HIS B 115 REMARK 465 HIS B 116 REMARK 465 HIS B 117 REMARK 465 HIS B 118 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 45 CG CD CE NZ REMARK 470 GLU A 91 CD OE1 OE2 REMARK 470 GLU A 150 CD OE1 OE2 REMARK 470 ARG A 155 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 158 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 159 CG CD CE NZ REMARK 470 ASP B 82 CG OD1 OD2 REMARK 470 HIS B 113 CG ND1 CD2 CE1 NE2 REMARK 470 HIS B 114 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 405 O HOH A 603 1.91 REMARK 500 N VAL B 59 O HOH B 301 2.09 REMARK 500 OE2 GLU A 140 O HOH A 401 2.14 REMARK 500 OE2 GLU A 61 O HOH A 402 2.15 REMARK 500 OE1 GLU A 95 O HOH A 403 2.16 REMARK 500 O HOH A 408 O HOH A 610 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 482 O HOH A 531 4454 1.93 REMARK 500 O HOH A 554 O HOH A 598 3555 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 140 CB GLU A 140 CG -0.126 REMARK 500 GLU B 64 CG GLU B 64 CD 0.133 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 68 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 73 -170.77 -67.82 REMARK 500 ASP A 107 75.91 20.19 REMARK 500 ASP A 107 79.30 20.19 REMARK 500 ASN A 203 -158.63 -150.54 REMARK 500 ASN A 233 -165.82 -127.53 REMARK 500 ASN A 233 -166.59 -127.53 REMARK 500 CYS B 111 67.85 -157.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 644 DISTANCE = 6.18 ANGSTROMS DBREF 8TK9 A 42 248 UNP G5ECB1 ZIG4_CAEEL 42 248 DBREF 8TK9 B 59 112 UNP P56174 ILB5_CAEEL 59 112 SEQADV 8TK9 GLY A 41 UNP G5ECB1 EXPRESSION TAG SEQADV 8TK9 HIS A 249 UNP G5ECB1 EXPRESSION TAG SEQADV 8TK9 HIS A 250 UNP G5ECB1 EXPRESSION TAG SEQADV 8TK9 HIS A 251 UNP G5ECB1 EXPRESSION TAG SEQADV 8TK9 HIS A 252 UNP G5ECB1 EXPRESSION TAG SEQADV 8TK9 HIS A 253 UNP G5ECB1 EXPRESSION TAG SEQADV 8TK9 HIS A 254 UNP G5ECB1 EXPRESSION TAG SEQADV 8TK9 HIS B 113 UNP P56174 EXPRESSION TAG SEQADV 8TK9 HIS B 114 UNP P56174 EXPRESSION TAG SEQADV 8TK9 HIS B 115 UNP P56174 EXPRESSION TAG SEQADV 8TK9 HIS B 116 UNP P56174 EXPRESSION TAG SEQADV 8TK9 HIS B 117 UNP P56174 EXPRESSION TAG SEQADV 8TK9 HIS B 118 UNP P56174 EXPRESSION TAG SEQRES 1 A 214 GLY SER PRO ALA LYS ILE LYS ILE VAL ALA PRO LEU GLU SEQRES 2 A 214 SER ALA LEU ILE PRO GLY GLY GLU THR TYR GLN LEU ARG SEQRES 3 A 214 CYS ASP ILE MET SER THR PRO ALA ALA THR ILE HIS TRP SEQRES 4 A 214 LYS PHE ASN GLY LYS LEU ILE GLN GLY SER ASN GLU LEU SEQRES 5 A 214 ASN VAL GLU GLU LYS LEU LEU ASN PHE GLY LYS ALA ILE SEQRES 6 A 214 VAL ASP THR GLY ILE VAL ALA SER ILE LEU THR ILE GLN SEQRES 7 A 214 CYS PRO SER ALA GLU ASN SER GLY THR TYR SER CYS VAL SEQRES 8 A 214 GLY TYR ASN GLY HIS GLN THR ILE GLU THR VAL ALA GLU SEQRES 9 A 214 VAL GLU ILE GLU GLY GLU ALA SER GLY CYS ARG SER ASN SEQRES 10 A 214 HIS LYS SER ALA PRO GLU ILE VAL PHE TRP THR ASP SER SEQRES 11 A 214 ARG PHE GLU MET THR GLY ASN VAL ALA THR LEU VAL CYS SEQRES 12 A 214 ARG ALA ASN GLN GLN VAL ASP TRP VAL TRP MET SER ASN SEQRES 13 A 214 ASP GLU LEU VAL LYS ASN ASN ASP LYS PHE THR VAL LEU SEQRES 14 A 214 SER ASN GLY ASP LEU VAL ILE LYS ASN ILE VAL TRP ASP SEQRES 15 A 214 ASP MET GLY THR TYR THR CYS ILE ALA ARG ASN GLN PHE SEQRES 16 A 214 GLY GLU ALA ARG GLN GLU THR PHE LEU TYR PRO THR ALA SEQRES 17 A 214 HIS HIS HIS HIS HIS HIS SEQRES 1 B 60 VAL PRO ALA PRO GLY GLU THR ARG ALA CYS GLY ARG LYS SEQRES 2 B 60 LEU ILE SER LEU VAL MET ALA VAL CYS GLY ASP LEU CYS SEQRES 3 B 60 ASN PRO GLN GLU GLY LYS ASP ILE ALA THR GLU CYS CYS SEQRES 4 B 60 GLY ASN GLN CYS SER ASP ASP TYR ILE ARG SER ALA CYS SEQRES 5 B 60 CYS PRO HIS HIS HIS HIS HIS HIS HET GOL A 301 6 HET SO4 B 201 5 HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL C3 H8 O3 FORMUL 4 SO4 O4 S 2- FORMUL 5 HOH *305(H2 O) HELIX 1 AA1 ASN A 93 ASN A 100 1 8 HELIX 2 AA2 SER A 121 SER A 125 5 5 HELIX 3 AA3 VAL A 220 MET A 224 5 5 HELIX 4 AA4 ALA B 61 GLY B 81 1 21 HELIX 5 AA5 ASP B 82 CYS B 84 5 3 HELIX 6 AA6 ASN B 85 ASN B 99 1 15 HELIX 7 AA7 SER B 102 ALA B 109 1 8 SHEET 1 AA1 8 LYS A 45 ALA A 50 0 SHEET 2 AA1 8 TYR A 63 THR A 72 -1 O ASP A 68 N VAL A 49 SHEET 3 AA1 8 THR A 108 ILE A 117 -1 O ILE A 117 N TYR A 63 SHEET 4 AA1 8 ILE A 164 MET A 174 -1 O PHE A 172 N THR A 108 SHEET 5 AA1 8 GLY A 236 THR A 247 1 O TYR A 245 N ARG A 171 SHEET 6 AA1 8 GLY A 225 ASN A 233 -1 N ALA A 231 O ALA A 238 SHEET 7 AA1 8 ASP A 190 SER A 195 -1 N VAL A 192 O ILE A 230 SHEET 8 AA1 8 GLU A 198 LEU A 199 -1 O GLU A 198 N SER A 195 SHEET 1 AA2 7 LYS A 45 ALA A 50 0 SHEET 2 AA2 7 TYR A 63 THR A 72 -1 O ASP A 68 N VAL A 49 SHEET 3 AA2 7 THR A 108 ILE A 117 -1 O ILE A 117 N TYR A 63 SHEET 4 AA2 7 ILE A 164 MET A 174 -1 O PHE A 172 N THR A 108 SHEET 5 AA2 7 ALA A 179 ALA A 185 -1 O ARG A 184 N PHE A 166 SHEET 6 AA2 7 ASP A 213 ILE A 216 -1 O ILE A 216 N ALA A 179 SHEET 7 AA2 7 PHE A 206 VAL A 208 -1 N THR A 207 O VAL A 215 SHEET 1 AA3 5 ALA A 55 PRO A 58 0 SHEET 2 AA3 5 THR A 138 GLU A 148 1 O GLU A 146 N ILE A 57 SHEET 3 AA3 5 GLY A 126 TYR A 133 -1 N GLY A 132 O ILE A 139 SHEET 4 AA3 5 THR A 76 PHE A 81 -1 N HIS A 78 O VAL A 131 SHEET 5 AA3 5 LYS A 84 GLN A 87 -1 O ILE A 86 N TRP A 79 SSBOND 1 CYS A 67 CYS A 130 1555 1555 2.08 SSBOND 2 CYS A 119 CYS A 154 1555 1555 2.06 SSBOND 3 CYS A 183 CYS A 229 1555 1555 2.04 SSBOND 4 CYS B 68 CYS B 97 1555 1555 2.07 SSBOND 5 CYS B 80 CYS B 111 1555 1555 2.05 SSBOND 6 CYS B 84 CYS B 110 1555 1555 2.02 SSBOND 7 CYS B 96 CYS B 101 1555 1555 2.10 CISPEP 1 THR A 72 PRO A 73 0 -6.01 CISPEP 2 THR A 72 PRO A 73 0 -13.18 CRYST1 74.528 74.528 107.058 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013418 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013418 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009341 0.00000