HEADER IMMUNE SYSTEM 27-JUL-23 8TLZ TITLE PRECLINICAL CHARACTERIZATION OF PAN-NKG2D LIGAND-BINDING NKG2D TITLE 2 RECEPTOR DECOYS COMPND MOL_ID: 1; COMPND 2 MOLECULE: MHC CLASS I POLYPEPTIDE-RELATED SEQUENCE A; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MICA; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS MODIFIED MICA, LIGAND NKG2D, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR P.B.RUPERT,R.STRONG REVDAT 1 17-APR-24 8TLZ 0 JRNL AUTH P.B.RUPERT,M.BUERGER,E.J.GIRARD,M.FRUTOSO,D.PARRILLA,K.NG, JRNL AUTH 2 T.GOOLEY,V.GROH,R.K.STRONG JRNL TITL PRECLINICAL CHARACTERIZATION OF PAN-NKG2D LIGAND-BINDING JRNL TITL 2 NKG2D RECEPTOR DECOYS. JRNL REF HELIYON V. 10 28583 2024 JRNL REFN ESSN 2405-8440 JRNL PMID 38586421 JRNL DOI 10.1016/J.HELIYON.2024.E28583 REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0155 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 110.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 19230 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.233 REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1054 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.82 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1379 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.70 REMARK 3 BIN R VALUE (WORKING SET) : 0.3030 REMARK 3 BIN FREE R VALUE SET COUNT : 63 REMARK 3 BIN FREE R VALUE : 0.3260 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2637 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 116 REMARK 3 SOLVENT ATOMS : 50 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 76.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.24000 REMARK 3 B22 (A**2) : -1.24000 REMARK 3 B33 (A**2) : 4.02000 REMARK 3 B12 (A**2) : -0.62000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.383 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.289 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.217 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 22.302 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.930 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.910 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2825 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2513 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3828 ; 1.241 ; 1.979 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5777 ; 0.845 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 327 ; 5.611 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 143 ;33.014 ;23.357 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 458 ;12.224 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 25 ;17.382 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 427 ; 0.066 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3140 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 679 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1314 ; 1.280 ; 5.596 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1313 ; 1.280 ; 5.595 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1636 ; 2.263 ; 8.379 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1637 ; 2.263 ; 8.380 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1511 ; 1.665 ; 6.042 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1508 ; 1.661 ; 6.035 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2190 ; 2.867 ; 9.002 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2897 ; 4.478 ;63.622 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2897 ; 4.476 ;63.619 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A B 10190 0.10 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 175 REMARK 3 ORIGIN FOR THE GROUP (A): -52.870 28.101 10.182 REMARK 3 T TENSOR REMARK 3 T11: 0.2249 T22: 0.0628 REMARK 3 T33: 0.1920 T12: 0.0192 REMARK 3 T13: 0.1482 T23: 0.0446 REMARK 3 L TENSOR REMARK 3 L11: 2.0979 L22: 5.2040 REMARK 3 L33: 0.3452 L12: -0.5614 REMARK 3 L13: -0.0067 L23: -0.6760 REMARK 3 S TENSOR REMARK 3 S11: 0.0744 S12: -0.1108 S13: -0.1553 REMARK 3 S21: -0.1800 S22: 0.1683 S23: 0.4013 REMARK 3 S31: -0.2097 S32: -0.0535 S33: -0.2427 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 175 REMARK 3 ORIGIN FOR THE GROUP (A): -41.990 4.460 19.150 REMARK 3 T TENSOR REMARK 3 T11: 0.1524 T22: 0.1248 REMARK 3 T33: 0.0626 T12: 0.1050 REMARK 3 T13: 0.0028 T23: 0.0385 REMARK 3 L TENSOR REMARK 3 L11: 0.8840 L22: 5.8486 REMARK 3 L33: 1.4529 L12: 0.5538 REMARK 3 L13: -0.4013 L23: -0.1425 REMARK 3 S TENSOR REMARK 3 S11: -0.1539 S12: -0.1291 S13: 0.0558 REMARK 3 S21: 0.1873 S22: 0.2444 S23: -0.0873 REMARK 3 S31: 0.1540 S32: 0.1723 S33: -0.0905 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8TLZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-JUL-23. REMARK 100 THE DEPOSITION ID IS D_1000276192. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JAN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97648 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20359 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 110.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 12.30 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.20 REMARK 200 R MERGE FOR SHELL (I) : 0.75200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, DL-MALIC ACID (PH 7.0), REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.33900 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 104.67800 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 78.50850 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 130.84750 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 26.16950 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 52.33900 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 104.67800 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 130.84750 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 78.50850 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 26.16950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 45 REMARK 465 GLN A 46 REMARK 465 GLY A 47 REMARK 465 GLN A 48 REMARK 465 TRP A 49 REMARK 465 ALA A 50 REMARK 465 GLU A 51 REMARK 465 ASP A 52 REMARK 465 VAL A 53 REMARK 465 LEU A 54 REMARK 465 GLY A 55 REMARK 465 VAL A 176 REMARK 465 VAL A 177 REMARK 465 LEU A 178 REMARK 465 ARG A 179 REMARK 465 ARG A 180 REMARK 465 THR A 181 REMARK 465 VAL A 182 REMARK 465 HIS A 183 REMARK 465 HIS A 184 REMARK 465 HIS A 185 REMARK 465 HIS A 186 REMARK 465 HIS A 187 REMARK 465 HIS A 188 REMARK 465 GLN B 48 REMARK 465 TRP B 49 REMARK 465 ALA B 50 REMARK 465 GLU B 51 REMARK 465 ASP B 52 REMARK 465 VAL B 53 REMARK 465 LEU B 54 REMARK 465 GLY B 55 REMARK 465 ASN B 56 REMARK 465 LYS B 57 REMARK 465 VAL B 176 REMARK 465 VAL B 177 REMARK 465 LEU B 178 REMARK 465 ARG B 179 REMARK 465 ARG B 180 REMARK 465 THR B 181 REMARK 465 VAL B 182 REMARK 465 HIS B 183 REMARK 465 HIS B 184 REMARK 465 HIS B 185 REMARK 465 HIS B 186 REMARK 465 HIS B 187 REMARK 465 HIS B 188 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 1 CG CD OE1 OE2 REMARK 470 GLN A 39 CG CD OE1 NE2 REMARK 470 LYS A 40 CG CD CE NZ REMARK 470 ARG A 42 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 56 CG OD1 ND2 REMARK 470 LYS A 57 CG CD CE NZ REMARK 470 ARG A 61 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 84 CG CD CE NZ REMARK 470 GLU B 1 CG CD OE1 OE2 REMARK 470 LYS B 40 CG CD CE NZ REMARK 470 ARG B 42 CG CD NE CZ NH1 NH2 REMARK 470 THR B 58 OG1 CG2 REMARK 470 LYS B 81 CG CD CE NZ REMARK 470 ASP B 82 CG OD1 OD2 REMARK 470 GLN B 83 CG CD OE1 NE2 REMARK 470 LYS B 84 CG CD CE NZ REMARK 470 GLN B 131 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 82 -105.34 -111.58 REMARK 500 LYS A 84 47.71 -107.56 REMARK 500 SER A 174 -74.76 -84.25 REMARK 500 GLN B 46 52.01 -152.61 REMARK 500 LYS B 81 24.52 46.86 REMARK 500 LYS B 84 -177.74 -67.35 REMARK 500 GLU B 85 -179.20 -67.63 REMARK 500 SER B 174 -74.76 -84.24 REMARK 500 REMARK 500 REMARK: NULL DBREF 8TLZ A 1 182 UNP Q29983 MICA_HUMAN 24 205 DBREF 8TLZ B 1 182 UNP Q29983 MICA_HUMAN 24 205 SEQADV 8TLZ TRP A 69 UNP Q29983 ASN 92 CONFLICT SEQADV 8TLZ LEU A 125 UNP Q29983 LYS 148 CONFLICT SEQADV 8TLZ GLU A 152 UNP Q29983 LYS 175 CONFLICT SEQADV 8TLZ ASP A 154 UNP Q29983 LYS 177 CONFLICT SEQADV 8TLZ ARG A 161 UNP Q29983 HIS 184 CONFLICT SEQADV 8TLZ SER A 166 UNP Q29983 GLN 189 CONFLICT SEQADV 8TLZ HIS A 183 UNP Q29983 EXPRESSION TAG SEQADV 8TLZ HIS A 184 UNP Q29983 EXPRESSION TAG SEQADV 8TLZ HIS A 185 UNP Q29983 EXPRESSION TAG SEQADV 8TLZ HIS A 186 UNP Q29983 EXPRESSION TAG SEQADV 8TLZ HIS A 187 UNP Q29983 EXPRESSION TAG SEQADV 8TLZ HIS A 188 UNP Q29983 EXPRESSION TAG SEQADV 8TLZ TRP B 69 UNP Q29983 ASN 92 CONFLICT SEQADV 8TLZ LEU B 125 UNP Q29983 LYS 148 CONFLICT SEQADV 8TLZ GLU B 152 UNP Q29983 LYS 175 CONFLICT SEQADV 8TLZ ASP B 154 UNP Q29983 LYS 177 CONFLICT SEQADV 8TLZ ARG B 161 UNP Q29983 HIS 184 CONFLICT SEQADV 8TLZ SER B 166 UNP Q29983 GLN 189 CONFLICT SEQADV 8TLZ HIS B 183 UNP Q29983 EXPRESSION TAG SEQADV 8TLZ HIS B 184 UNP Q29983 EXPRESSION TAG SEQADV 8TLZ HIS B 185 UNP Q29983 EXPRESSION TAG SEQADV 8TLZ HIS B 186 UNP Q29983 EXPRESSION TAG SEQADV 8TLZ HIS B 187 UNP Q29983 EXPRESSION TAG SEQADV 8TLZ HIS B 188 UNP Q29983 EXPRESSION TAG SEQRES 1 A 188 GLU PRO HIS SER LEU ARG TYR ASN LEU THR VAL LEU SER SEQRES 2 A 188 TRP ASP GLY SER VAL GLN SER GLY PHE LEU THR GLU VAL SEQRES 3 A 188 HIS LEU ASP GLY GLN PRO PHE LEU ARG CYS ASP ARG GLN SEQRES 4 A 188 LYS CYS ARG ALA LYS PRO GLN GLY GLN TRP ALA GLU ASP SEQRES 5 A 188 VAL LEU GLY ASN LYS THR TRP ASP ARG GLU THR ARG ASP SEQRES 6 A 188 LEU THR GLY TRP GLY LYS ASP LEU ARG MET THR LEU ALA SEQRES 7 A 188 HIS ILE LYS ASP GLN LYS GLU GLY LEU HIS SER LEU GLN SEQRES 8 A 188 GLU ILE ARG VAL CYS GLU ILE HIS GLU ASP ASN SER THR SEQRES 9 A 188 ARG SER SER GLN HIS PHE TYR TYR ASP GLY GLU LEU PHE SEQRES 10 A 188 LEU SER GLN ASN LEU GLU THR LEU GLU TRP THR MET PRO SEQRES 11 A 188 GLN SER SER ARG ALA GLN THR LEU ALA MET ASN VAL ARG SEQRES 12 A 188 ASN PHE LEU LYS GLU ASP ALA MET GLU THR ASP THR HIS SEQRES 13 A 188 TYR HIS ALA MET ARG ALA ASP CYS LEU SER GLU LEU ARG SEQRES 14 A 188 ARG TYR LEU LYS SER GLY VAL VAL LEU ARG ARG THR VAL SEQRES 15 A 188 HIS HIS HIS HIS HIS HIS SEQRES 1 B 188 GLU PRO HIS SER LEU ARG TYR ASN LEU THR VAL LEU SER SEQRES 2 B 188 TRP ASP GLY SER VAL GLN SER GLY PHE LEU THR GLU VAL SEQRES 3 B 188 HIS LEU ASP GLY GLN PRO PHE LEU ARG CYS ASP ARG GLN SEQRES 4 B 188 LYS CYS ARG ALA LYS PRO GLN GLY GLN TRP ALA GLU ASP SEQRES 5 B 188 VAL LEU GLY ASN LYS THR TRP ASP ARG GLU THR ARG ASP SEQRES 6 B 188 LEU THR GLY TRP GLY LYS ASP LEU ARG MET THR LEU ALA SEQRES 7 B 188 HIS ILE LYS ASP GLN LYS GLU GLY LEU HIS SER LEU GLN SEQRES 8 B 188 GLU ILE ARG VAL CYS GLU ILE HIS GLU ASP ASN SER THR SEQRES 9 B 188 ARG SER SER GLN HIS PHE TYR TYR ASP GLY GLU LEU PHE SEQRES 10 B 188 LEU SER GLN ASN LEU GLU THR LEU GLU TRP THR MET PRO SEQRES 11 B 188 GLN SER SER ARG ALA GLN THR LEU ALA MET ASN VAL ARG SEQRES 12 B 188 ASN PHE LEU LYS GLU ASP ALA MET GLU THR ASP THR HIS SEQRES 13 B 188 TYR HIS ALA MET ARG ALA ASP CYS LEU SER GLU LEU ARG SEQRES 14 B 188 ARG TYR LEU LYS SER GLY VAL VAL LEU ARG ARG THR VAL SEQRES 15 B 188 HIS HIS HIS HIS HIS HIS HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET LMR A 201 9 HET NAG B 201 14 HET GOL B 202 6 HET LMR B 203 9 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM LMR (2S)-2-HYDROXYBUTANEDIOIC ACID HETNAM GOL GLYCEROL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN LMR L-MALATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 NAG 5(C8 H15 N O6) FORMUL 3 BMA 2(C6 H12 O6) FORMUL 5 LMR 2(C4 H6 O5) FORMUL 7 GOL C3 H8 O3 FORMUL 9 HOH *50(H2 O) HELIX 1 AA1 TRP A 59 HIS A 79 1 21 HELIX 2 AA2 SER A 132 ASP A 149 1 18 HELIX 3 AA3 THR A 153 GLY A 175 1 23 HELIX 4 AA4 TRP B 59 HIS B 79 1 21 HELIX 5 AA5 SER B 132 ASP B 149 1 18 HELIX 6 AA6 THR B 153 GLY B 175 1 23 SHEET 1 AA1 5 SER A 17 VAL A 18 0 SHEET 2 AA1 5 HIS A 3 TRP A 14 -1 N TRP A 14 O SER A 17 SHEET 3 AA1 5 LEU A 23 LEU A 28 -1 O GLU A 25 N ASN A 8 SHEET 4 AA1 5 GLN A 31 ASP A 37 -1 O PHE A 33 N VAL A 26 SHEET 5 AA1 5 CYS A 41 ALA A 43 -1 O ARG A 42 N ARG A 35 SHEET 1 AA2 6 SER A 17 VAL A 18 0 SHEET 2 AA2 6 HIS A 3 TRP A 14 -1 N TRP A 14 O SER A 17 SHEET 3 AA2 6 LEU A 87 ILE A 98 -1 O ARG A 94 N TYR A 7 SHEET 4 AA2 6 THR A 104 TYR A 112 -1 O HIS A 109 N ILE A 93 SHEET 5 AA2 6 GLU A 115 ASN A 121 -1 O LEU A 118 N PHE A 110 SHEET 6 AA2 6 GLU A 126 THR A 128 -1 O THR A 128 N SER A 119 SHEET 1 AA3 5 SER B 17 VAL B 18 0 SHEET 2 AA3 5 HIS B 3 TRP B 14 -1 N TRP B 14 O SER B 17 SHEET 3 AA3 5 LEU B 23 LEU B 28 -1 O GLU B 25 N ASN B 8 SHEET 4 AA3 5 GLN B 31 ASP B 37 -1 O PHE B 33 N VAL B 26 SHEET 5 AA3 5 CYS B 41 ALA B 43 -1 O ARG B 42 N ARG B 35 SHEET 1 AA4 6 SER B 17 VAL B 18 0 SHEET 2 AA4 6 HIS B 3 TRP B 14 -1 N TRP B 14 O SER B 17 SHEET 3 AA4 6 LEU B 87 ILE B 98 -1 O ARG B 94 N TYR B 7 SHEET 4 AA4 6 THR B 104 TYR B 112 -1 O HIS B 109 N ILE B 93 SHEET 5 AA4 6 GLU B 115 ASN B 121 -1 O LEU B 118 N PHE B 110 SHEET 6 AA4 6 GLU B 126 THR B 128 -1 O THR B 128 N SER B 119 SSBOND 1 CYS A 36 CYS A 41 1555 1555 2.05 SSBOND 2 CYS A 96 CYS A 164 1555 1555 2.09 SSBOND 3 CYS B 36 CYS B 41 1555 1555 2.05 SSBOND 4 CYS B 96 CYS B 164 1555 1555 2.07 LINK ND2 ASN A 8 C1 NAG D 1 1555 1555 1.45 LINK ND2 ASN B 8 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN B 102 C1 NAG B 201 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.45 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.45 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.45 CRYST1 127.823 127.823 157.017 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007823 0.004517 0.000000 0.00000 SCALE2 0.000000 0.009034 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006369 0.00000