data_8TR9 # _entry.id 8TR9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.395 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8TR9 pdb_00008tr9 10.2210/pdb8tr9/pdb WWPDB D_1000276487 ? ? EMDB EMD-41574 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-07-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8TR9 _pdbx_database_status.recvd_initial_deposition_date 2023-08-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'cryo-EM structure of transglutaminase 2 bound to GDP' _pdbx_database_related.db_id EMD-41574 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email rac1@cornell.edu _pdbx_contact_author.name_first Richard _pdbx_contact_author.name_last Cerione _pdbx_contact_author.name_mi A _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-4512-5897 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Aplin, C.' 1 0000-0002-0211-8016 'Cerione, R.A.' 2 0000-0003-4512-5897 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Conformational activation and inhibition of transglutaminase 2 determined by static and time resolved small-angle X-ray scattering and cryoelectron microscopy ; _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Aplin, C.' 1 0000-0002-0211-8016 primary 'Zielinski, K.A.' 2 0000-0002-9907-5058 primary 'Pabit, S.' 3 0000-0002-2102-2474 primary 'Ogunribido, D.' 4 ? primary 'Katt, W.P.' 5 0000-0001-5104-7667 primary 'Pollack, L.' 6 0000-0002-9366-4396 primary 'Cerione, R.A.' 7 0000-0003-4512-5897 primary 'Milano, S.K.' 8 0000-0003-3624-0113 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein-glutamine gamma-glutamyltransferase 2' 77412.680 1 2.3.2.13,3.4.-.-,3.5.1.44,2.3.1.- ? ? ? 2 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Erythrocyte transglutaminase,Heart G alpha(h),hhG alpha(h),Isopeptidase TGM2,Protein G alpha(h),G(h),Protein-glutamine deamidase TGM2,Protein-glutamine dopaminyltransferase TGM2,Protein-glutamine histaminyltransferase TGM2,Protein-glutamine noradrenalinyltransferase TGM2,Protein-glutamine serotonyltransferase TGM2,Tissue transglutaminase,tTG,tTgase,Transglutaminase C,TG(C),TGC,TGase C,Transglutaminase H,TGase H,Transglutaminase II,TGase II,Transglutaminase-2,TG2,TGase-2,hTG2 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MAEELVLERCDLELETNGRDHHTADLCREKLVVRRGQPFWLTLHFEGRNYEASVDSLTFSVVTGPAPSQEAGTKARFPLR DAVEEGDWTATVVDQQDCTLSLQLTTPANAPIGLYRLSLEASTGYQGSSFVLGHFILLFNAWCPADAVYLDSEEERQEYV LTQQGFIYQGSAKFIKNIPWNFGQFEDGILDICLILLDVNPKFLKNAGRDCSRRSSPVYVGRVVSGMVNCNDDQGVLLGR WDNNYGDGVSPMSWIGSVDILRRWKNHGCQRVKYGQCWVFAAVACTVLRCLGIPTRVVTNYNSAHDQNSNLLIEYFRNEF GEIQGDKSEMIWNFHCWVESWMTRPDLQPGYEGWQALDPTPQEKSEGTYCCGPVPVRAIKEGDLSTKYDAPFVFAEVNAD VVDWIQQDDGSVHKSINRSLIVGLKISTKSVGRDEREDITHTYKYPEGSSEEREAFTRANHLNKLAEKEETGMAMRIRVG QSMNMGSDFDVFAHITNNTAEEYVCRLLLCARTVSYNGILGPECGTKYLLNLNLEPFSEKSVPLCILYEKYRDCLTESNL IKVRALLVEPVINSYLLAERDLYLENPEIKIRILGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEIPD PVEAGEEVKVRMDLLPLHMGLHKLVVNFESDKLKAVKGFRNVIIGPA ; _entity_poly.pdbx_seq_one_letter_code_can ;MAEELVLERCDLELETNGRDHHTADLCREKLVVRRGQPFWLTLHFEGRNYEASVDSLTFSVVTGPAPSQEAGTKARFPLR DAVEEGDWTATVVDQQDCTLSLQLTTPANAPIGLYRLSLEASTGYQGSSFVLGHFILLFNAWCPADAVYLDSEEERQEYV LTQQGFIYQGSAKFIKNIPWNFGQFEDGILDICLILLDVNPKFLKNAGRDCSRRSSPVYVGRVVSGMVNCNDDQGVLLGR WDNNYGDGVSPMSWIGSVDILRRWKNHGCQRVKYGQCWVFAAVACTVLRCLGIPTRVVTNYNSAHDQNSNLLIEYFRNEF GEIQGDKSEMIWNFHCWVESWMTRPDLQPGYEGWQALDPTPQEKSEGTYCCGPVPVRAIKEGDLSTKYDAPFVFAEVNAD VVDWIQQDDGSVHKSINRSLIVGLKISTKSVGRDEREDITHTYKYPEGSSEEREAFTRANHLNKLAEKEETGMAMRIRVG QSMNMGSDFDVFAHITNNTAEEYVCRLLLCARTVSYNGILGPECGTKYLLNLNLEPFSEKSVPLCILYEKYRDCLTESNL IKVRALLVEPVINSYLLAERDLYLENPEIKIRILGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEIPD PVEAGEEVKVRMDLLPLHMGLHKLVVNFESDKLKAVKGFRNVIIGPA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name "GUANOSINE-5'-DIPHOSPHATE" _pdbx_entity_nonpoly.comp_id GDP # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 GLU n 1 4 GLU n 1 5 LEU n 1 6 VAL n 1 7 LEU n 1 8 GLU n 1 9 ARG n 1 10 CYS n 1 11 ASP n 1 12 LEU n 1 13 GLU n 1 14 LEU n 1 15 GLU n 1 16 THR n 1 17 ASN n 1 18 GLY n 1 19 ARG n 1 20 ASP n 1 21 HIS n 1 22 HIS n 1 23 THR n 1 24 ALA n 1 25 ASP n 1 26 LEU n 1 27 CYS n 1 28 ARG n 1 29 GLU n 1 30 LYS n 1 31 LEU n 1 32 VAL n 1 33 VAL n 1 34 ARG n 1 35 ARG n 1 36 GLY n 1 37 GLN n 1 38 PRO n 1 39 PHE n 1 40 TRP n 1 41 LEU n 1 42 THR n 1 43 LEU n 1 44 HIS n 1 45 PHE n 1 46 GLU n 1 47 GLY n 1 48 ARG n 1 49 ASN n 1 50 TYR n 1 51 GLU n 1 52 ALA n 1 53 SER n 1 54 VAL n 1 55 ASP n 1 56 SER n 1 57 LEU n 1 58 THR n 1 59 PHE n 1 60 SER n 1 61 VAL n 1 62 VAL n 1 63 THR n 1 64 GLY n 1 65 PRO n 1 66 ALA n 1 67 PRO n 1 68 SER n 1 69 GLN n 1 70 GLU n 1 71 ALA n 1 72 GLY n 1 73 THR n 1 74 LYS n 1 75 ALA n 1 76 ARG n 1 77 PHE n 1 78 PRO n 1 79 LEU n 1 80 ARG n 1 81 ASP n 1 82 ALA n 1 83 VAL n 1 84 GLU n 1 85 GLU n 1 86 GLY n 1 87 ASP n 1 88 TRP n 1 89 THR n 1 90 ALA n 1 91 THR n 1 92 VAL n 1 93 VAL n 1 94 ASP n 1 95 GLN n 1 96 GLN n 1 97 ASP n 1 98 CYS n 1 99 THR n 1 100 LEU n 1 101 SER n 1 102 LEU n 1 103 GLN n 1 104 LEU n 1 105 THR n 1 106 THR n 1 107 PRO n 1 108 ALA n 1 109 ASN n 1 110 ALA n 1 111 PRO n 1 112 ILE n 1 113 GLY n 1 114 LEU n 1 115 TYR n 1 116 ARG n 1 117 LEU n 1 118 SER n 1 119 LEU n 1 120 GLU n 1 121 ALA n 1 122 SER n 1 123 THR n 1 124 GLY n 1 125 TYR n 1 126 GLN n 1 127 GLY n 1 128 SER n 1 129 SER n 1 130 PHE n 1 131 VAL n 1 132 LEU n 1 133 GLY n 1 134 HIS n 1 135 PHE n 1 136 ILE n 1 137 LEU n 1 138 LEU n 1 139 PHE n 1 140 ASN n 1 141 ALA n 1 142 TRP n 1 143 CYS n 1 144 PRO n 1 145 ALA n 1 146 ASP n 1 147 ALA n 1 148 VAL n 1 149 TYR n 1 150 LEU n 1 151 ASP n 1 152 SER n 1 153 GLU n 1 154 GLU n 1 155 GLU n 1 156 ARG n 1 157 GLN n 1 158 GLU n 1 159 TYR n 1 160 VAL n 1 161 LEU n 1 162 THR n 1 163 GLN n 1 164 GLN n 1 165 GLY n 1 166 PHE n 1 167 ILE n 1 168 TYR n 1 169 GLN n 1 170 GLY n 1 171 SER n 1 172 ALA n 1 173 LYS n 1 174 PHE n 1 175 ILE n 1 176 LYS n 1 177 ASN n 1 178 ILE n 1 179 PRO n 1 180 TRP n 1 181 ASN n 1 182 PHE n 1 183 GLY n 1 184 GLN n 1 185 PHE n 1 186 GLU n 1 187 ASP n 1 188 GLY n 1 189 ILE n 1 190 LEU n 1 191 ASP n 1 192 ILE n 1 193 CYS n 1 194 LEU n 1 195 ILE n 1 196 LEU n 1 197 LEU n 1 198 ASP n 1 199 VAL n 1 200 ASN n 1 201 PRO n 1 202 LYS n 1 203 PHE n 1 204 LEU n 1 205 LYS n 1 206 ASN n 1 207 ALA n 1 208 GLY n 1 209 ARG n 1 210 ASP n 1 211 CYS n 1 212 SER n 1 213 ARG n 1 214 ARG n 1 215 SER n 1 216 SER n 1 217 PRO n 1 218 VAL n 1 219 TYR n 1 220 VAL n 1 221 GLY n 1 222 ARG n 1 223 VAL n 1 224 VAL n 1 225 SER n 1 226 GLY n 1 227 MET n 1 228 VAL n 1 229 ASN n 1 230 CYS n 1 231 ASN n 1 232 ASP n 1 233 ASP n 1 234 GLN n 1 235 GLY n 1 236 VAL n 1 237 LEU n 1 238 LEU n 1 239 GLY n 1 240 ARG n 1 241 TRP n 1 242 ASP n 1 243 ASN n 1 244 ASN n 1 245 TYR n 1 246 GLY n 1 247 ASP n 1 248 GLY n 1 249 VAL n 1 250 SER n 1 251 PRO n 1 252 MET n 1 253 SER n 1 254 TRP n 1 255 ILE n 1 256 GLY n 1 257 SER n 1 258 VAL n 1 259 ASP n 1 260 ILE n 1 261 LEU n 1 262 ARG n 1 263 ARG n 1 264 TRP n 1 265 LYS n 1 266 ASN n 1 267 HIS n 1 268 GLY n 1 269 CYS n 1 270 GLN n 1 271 ARG n 1 272 VAL n 1 273 LYS n 1 274 TYR n 1 275 GLY n 1 276 GLN n 1 277 CYS n 1 278 TRP n 1 279 VAL n 1 280 PHE n 1 281 ALA n 1 282 ALA n 1 283 VAL n 1 284 ALA n 1 285 CYS n 1 286 THR n 1 287 VAL n 1 288 LEU n 1 289 ARG n 1 290 CYS n 1 291 LEU n 1 292 GLY n 1 293 ILE n 1 294 PRO n 1 295 THR n 1 296 ARG n 1 297 VAL n 1 298 VAL n 1 299 THR n 1 300 ASN n 1 301 TYR n 1 302 ASN n 1 303 SER n 1 304 ALA n 1 305 HIS n 1 306 ASP n 1 307 GLN n 1 308 ASN n 1 309 SER n 1 310 ASN n 1 311 LEU n 1 312 LEU n 1 313 ILE n 1 314 GLU n 1 315 TYR n 1 316 PHE n 1 317 ARG n 1 318 ASN n 1 319 GLU n 1 320 PHE n 1 321 GLY n 1 322 GLU n 1 323 ILE n 1 324 GLN n 1 325 GLY n 1 326 ASP n 1 327 LYS n 1 328 SER n 1 329 GLU n 1 330 MET n 1 331 ILE n 1 332 TRP n 1 333 ASN n 1 334 PHE n 1 335 HIS n 1 336 CYS n 1 337 TRP n 1 338 VAL n 1 339 GLU n 1 340 SER n 1 341 TRP n 1 342 MET n 1 343 THR n 1 344 ARG n 1 345 PRO n 1 346 ASP n 1 347 LEU n 1 348 GLN n 1 349 PRO n 1 350 GLY n 1 351 TYR n 1 352 GLU n 1 353 GLY n 1 354 TRP n 1 355 GLN n 1 356 ALA n 1 357 LEU n 1 358 ASP n 1 359 PRO n 1 360 THR n 1 361 PRO n 1 362 GLN n 1 363 GLU n 1 364 LYS n 1 365 SER n 1 366 GLU n 1 367 GLY n 1 368 THR n 1 369 TYR n 1 370 CYS n 1 371 CYS n 1 372 GLY n 1 373 PRO n 1 374 VAL n 1 375 PRO n 1 376 VAL n 1 377 ARG n 1 378 ALA n 1 379 ILE n 1 380 LYS n 1 381 GLU n 1 382 GLY n 1 383 ASP n 1 384 LEU n 1 385 SER n 1 386 THR n 1 387 LYS n 1 388 TYR n 1 389 ASP n 1 390 ALA n 1 391 PRO n 1 392 PHE n 1 393 VAL n 1 394 PHE n 1 395 ALA n 1 396 GLU n 1 397 VAL n 1 398 ASN n 1 399 ALA n 1 400 ASP n 1 401 VAL n 1 402 VAL n 1 403 ASP n 1 404 TRP n 1 405 ILE n 1 406 GLN n 1 407 GLN n 1 408 ASP n 1 409 ASP n 1 410 GLY n 1 411 SER n 1 412 VAL n 1 413 HIS n 1 414 LYS n 1 415 SER n 1 416 ILE n 1 417 ASN n 1 418 ARG n 1 419 SER n 1 420 LEU n 1 421 ILE n 1 422 VAL n 1 423 GLY n 1 424 LEU n 1 425 LYS n 1 426 ILE n 1 427 SER n 1 428 THR n 1 429 LYS n 1 430 SER n 1 431 VAL n 1 432 GLY n 1 433 ARG n 1 434 ASP n 1 435 GLU n 1 436 ARG n 1 437 GLU n 1 438 ASP n 1 439 ILE n 1 440 THR n 1 441 HIS n 1 442 THR n 1 443 TYR n 1 444 LYS n 1 445 TYR n 1 446 PRO n 1 447 GLU n 1 448 GLY n 1 449 SER n 1 450 SER n 1 451 GLU n 1 452 GLU n 1 453 ARG n 1 454 GLU n 1 455 ALA n 1 456 PHE n 1 457 THR n 1 458 ARG n 1 459 ALA n 1 460 ASN n 1 461 HIS n 1 462 LEU n 1 463 ASN n 1 464 LYS n 1 465 LEU n 1 466 ALA n 1 467 GLU n 1 468 LYS n 1 469 GLU n 1 470 GLU n 1 471 THR n 1 472 GLY n 1 473 MET n 1 474 ALA n 1 475 MET n 1 476 ARG n 1 477 ILE n 1 478 ARG n 1 479 VAL n 1 480 GLY n 1 481 GLN n 1 482 SER n 1 483 MET n 1 484 ASN n 1 485 MET n 1 486 GLY n 1 487 SER n 1 488 ASP n 1 489 PHE n 1 490 ASP n 1 491 VAL n 1 492 PHE n 1 493 ALA n 1 494 HIS n 1 495 ILE n 1 496 THR n 1 497 ASN n 1 498 ASN n 1 499 THR n 1 500 ALA n 1 501 GLU n 1 502 GLU n 1 503 TYR n 1 504 VAL n 1 505 CYS n 1 506 ARG n 1 507 LEU n 1 508 LEU n 1 509 LEU n 1 510 CYS n 1 511 ALA n 1 512 ARG n 1 513 THR n 1 514 VAL n 1 515 SER n 1 516 TYR n 1 517 ASN n 1 518 GLY n 1 519 ILE n 1 520 LEU n 1 521 GLY n 1 522 PRO n 1 523 GLU n 1 524 CYS n 1 525 GLY n 1 526 THR n 1 527 LYS n 1 528 TYR n 1 529 LEU n 1 530 LEU n 1 531 ASN n 1 532 LEU n 1 533 ASN n 1 534 LEU n 1 535 GLU n 1 536 PRO n 1 537 PHE n 1 538 SER n 1 539 GLU n 1 540 LYS n 1 541 SER n 1 542 VAL n 1 543 PRO n 1 544 LEU n 1 545 CYS n 1 546 ILE n 1 547 LEU n 1 548 TYR n 1 549 GLU n 1 550 LYS n 1 551 TYR n 1 552 ARG n 1 553 ASP n 1 554 CYS n 1 555 LEU n 1 556 THR n 1 557 GLU n 1 558 SER n 1 559 ASN n 1 560 LEU n 1 561 ILE n 1 562 LYS n 1 563 VAL n 1 564 ARG n 1 565 ALA n 1 566 LEU n 1 567 LEU n 1 568 VAL n 1 569 GLU n 1 570 PRO n 1 571 VAL n 1 572 ILE n 1 573 ASN n 1 574 SER n 1 575 TYR n 1 576 LEU n 1 577 LEU n 1 578 ALA n 1 579 GLU n 1 580 ARG n 1 581 ASP n 1 582 LEU n 1 583 TYR n 1 584 LEU n 1 585 GLU n 1 586 ASN n 1 587 PRO n 1 588 GLU n 1 589 ILE n 1 590 LYS n 1 591 ILE n 1 592 ARG n 1 593 ILE n 1 594 LEU n 1 595 GLY n 1 596 GLU n 1 597 PRO n 1 598 LYS n 1 599 GLN n 1 600 LYS n 1 601 ARG n 1 602 LYS n 1 603 LEU n 1 604 VAL n 1 605 ALA n 1 606 GLU n 1 607 VAL n 1 608 SER n 1 609 LEU n 1 610 GLN n 1 611 ASN n 1 612 PRO n 1 613 LEU n 1 614 PRO n 1 615 VAL n 1 616 ALA n 1 617 LEU n 1 618 GLU n 1 619 GLY n 1 620 CYS n 1 621 THR n 1 622 PHE n 1 623 THR n 1 624 VAL n 1 625 GLU n 1 626 GLY n 1 627 ALA n 1 628 GLY n 1 629 LEU n 1 630 THR n 1 631 GLU n 1 632 GLU n 1 633 GLN n 1 634 LYS n 1 635 THR n 1 636 VAL n 1 637 GLU n 1 638 ILE n 1 639 PRO n 1 640 ASP n 1 641 PRO n 1 642 VAL n 1 643 GLU n 1 644 ALA n 1 645 GLY n 1 646 GLU n 1 647 GLU n 1 648 VAL n 1 649 LYS n 1 650 VAL n 1 651 ARG n 1 652 MET n 1 653 ASP n 1 654 LEU n 1 655 LEU n 1 656 PRO n 1 657 LEU n 1 658 HIS n 1 659 MET n 1 660 GLY n 1 661 LEU n 1 662 HIS n 1 663 LYS n 1 664 LEU n 1 665 VAL n 1 666 VAL n 1 667 ASN n 1 668 PHE n 1 669 GLU n 1 670 SER n 1 671 ASP n 1 672 LYS n 1 673 LEU n 1 674 LYS n 1 675 ALA n 1 676 VAL n 1 677 LYS n 1 678 GLY n 1 679 PHE n 1 680 ARG n 1 681 ASN n 1 682 VAL n 1 683 ILE n 1 684 ILE n 1 685 GLY n 1 686 PRO n 1 687 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 687 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene TGM2 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 GLU 3 3 ? ? ? A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 GLU 8 8 8 GLU GLU A . n A 1 9 ARG 9 9 9 ARG ARG A . n A 1 10 CYS 10 10 10 CYS CYS A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 ASN 17 17 17 ASN ASN A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 ARG 19 19 19 ARG ARG A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 HIS 21 21 21 HIS HIS A . n A 1 22 HIS 22 22 22 HIS HIS A . n A 1 23 THR 23 23 23 THR THR A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 CYS 27 27 27 CYS CYS A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 GLU 29 29 29 GLU GLU A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 ARG 35 35 35 ARG ARG A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 GLN 37 37 37 GLN GLN A . n A 1 38 PRO 38 38 38 PRO PRO A . n A 1 39 PHE 39 39 39 PHE PHE A . n A 1 40 TRP 40 40 40 TRP TRP A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 THR 42 42 42 THR THR A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 HIS 44 44 44 HIS HIS A . n A 1 45 PHE 45 45 45 PHE PHE A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 ARG 48 48 48 ARG ARG A . n A 1 49 ASN 49 49 49 ASN ASN A . n A 1 50 TYR 50 50 50 TYR TYR A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 SER 53 53 53 SER SER A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 SER 56 56 56 SER SER A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 THR 58 58 58 THR THR A . n A 1 59 PHE 59 59 59 PHE PHE A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 VAL 61 61 61 VAL VAL A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 THR 63 63 63 THR THR A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 PRO 65 65 65 PRO PRO A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 PRO 67 67 67 PRO PRO A . n A 1 68 SER 68 68 68 SER SER A . n A 1 69 GLN 69 69 69 GLN GLN A . n A 1 70 GLU 70 70 70 GLU GLU A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 ARG 76 76 76 ARG ARG A . n A 1 77 PHE 77 77 77 PHE PHE A . n A 1 78 PRO 78 78 78 PRO PRO A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 ARG 80 80 80 ARG ARG A . n A 1 81 ASP 81 81 81 ASP ASP A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 GLU 84 84 84 GLU GLU A . n A 1 85 GLU 85 85 85 GLU GLU A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 TRP 88 88 88 TRP TRP A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 ASP 94 94 94 ASP ASP A . n A 1 95 GLN 95 95 95 GLN GLN A . n A 1 96 GLN 96 96 96 GLN GLN A . n A 1 97 ASP 97 97 97 ASP ASP A . n A 1 98 CYS 98 98 98 CYS CYS A . n A 1 99 THR 99 99 99 THR THR A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 GLN 103 103 103 GLN GLN A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 THR 105 105 105 THR THR A . n A 1 106 THR 106 106 106 THR THR A . n A 1 107 PRO 107 107 107 PRO PRO A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 ASN 109 109 109 ASN ASN A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 PRO 111 111 111 PRO PRO A . n A 1 112 ILE 112 112 112 ILE ILE A . n A 1 113 GLY 113 113 113 GLY GLY A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 TYR 115 115 115 TYR TYR A . n A 1 116 ARG 116 116 116 ARG ARG A . n A 1 117 LEU 117 117 117 LEU LEU A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 LEU 119 119 119 LEU LEU A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 ALA 121 121 121 ALA ALA A . n A 1 122 SER 122 122 122 SER SER A . n A 1 123 THR 123 123 123 THR THR A . n A 1 124 GLY 124 124 124 GLY GLY A . n A 1 125 TYR 125 125 125 TYR TYR A . n A 1 126 GLN 126 126 126 GLN GLN A . n A 1 127 GLY 127 127 127 GLY GLY A . n A 1 128 SER 128 128 128 SER SER A . n A 1 129 SER 129 129 129 SER SER A . n A 1 130 PHE 130 130 130 PHE PHE A . n A 1 131 VAL 131 131 131 VAL VAL A . n A 1 132 LEU 132 132 132 LEU LEU A . n A 1 133 GLY 133 133 133 GLY GLY A . n A 1 134 HIS 134 134 134 HIS HIS A . n A 1 135 PHE 135 135 135 PHE PHE A . n A 1 136 ILE 136 136 136 ILE ILE A . n A 1 137 LEU 137 137 137 LEU LEU A . n A 1 138 LEU 138 138 138 LEU LEU A . n A 1 139 PHE 139 139 139 PHE PHE A . n A 1 140 ASN 140 140 140 ASN ASN A . n A 1 141 ALA 141 141 141 ALA ALA A . n A 1 142 TRP 142 142 142 TRP TRP A . n A 1 143 CYS 143 143 143 CYS CYS A . n A 1 144 PRO 144 144 144 PRO PRO A . n A 1 145 ALA 145 145 145 ALA ALA A . n A 1 146 ASP 146 146 146 ASP ASP A . n A 1 147 ALA 147 147 147 ALA ALA A . n A 1 148 VAL 148 148 148 VAL VAL A . n A 1 149 TYR 149 149 149 TYR TYR A . n A 1 150 LEU 150 150 150 LEU LEU A . n A 1 151 ASP 151 151 151 ASP ASP A . n A 1 152 SER 152 152 152 SER SER A . n A 1 153 GLU 153 153 153 GLU GLU A . n A 1 154 GLU 154 154 154 GLU GLU A . n A 1 155 GLU 155 155 155 GLU GLU A . n A 1 156 ARG 156 156 156 ARG ARG A . n A 1 157 GLN 157 157 157 GLN GLN A . n A 1 158 GLU 158 158 158 GLU GLU A . n A 1 159 TYR 159 159 159 TYR TYR A . n A 1 160 VAL 160 160 160 VAL VAL A . n A 1 161 LEU 161 161 161 LEU LEU A . n A 1 162 THR 162 162 162 THR THR A . n A 1 163 GLN 163 163 163 GLN GLN A . n A 1 164 GLN 164 164 164 GLN GLN A . n A 1 165 GLY 165 165 165 GLY GLY A . n A 1 166 PHE 166 166 166 PHE PHE A . n A 1 167 ILE 167 167 167 ILE ILE A . n A 1 168 TYR 168 168 168 TYR TYR A . n A 1 169 GLN 169 169 169 GLN GLN A . n A 1 170 GLY 170 170 170 GLY GLY A . n A 1 171 SER 171 171 171 SER SER A . n A 1 172 ALA 172 172 172 ALA ALA A . n A 1 173 LYS 173 173 173 LYS LYS A . n A 1 174 PHE 174 174 174 PHE PHE A . n A 1 175 ILE 175 175 175 ILE ILE A . n A 1 176 LYS 176 176 176 LYS LYS A . n A 1 177 ASN 177 177 177 ASN ASN A . n A 1 178 ILE 178 178 178 ILE ILE A . n A 1 179 PRO 179 179 179 PRO PRO A . n A 1 180 TRP 180 180 180 TRP TRP A . n A 1 181 ASN 181 181 181 ASN ASN A . n A 1 182 PHE 182 182 182 PHE PHE A . n A 1 183 GLY 183 183 183 GLY GLY A . n A 1 184 GLN 184 184 184 GLN GLN A . n A 1 185 PHE 185 185 185 PHE PHE A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 ASP 187 187 187 ASP ASP A . n A 1 188 GLY 188 188 188 GLY GLY A . n A 1 189 ILE 189 189 189 ILE ILE A . n A 1 190 LEU 190 190 190 LEU LEU A . n A 1 191 ASP 191 191 191 ASP ASP A . n A 1 192 ILE 192 192 192 ILE ILE A . n A 1 193 CYS 193 193 193 CYS CYS A . n A 1 194 LEU 194 194 194 LEU LEU A . n A 1 195 ILE 195 195 195 ILE ILE A . n A 1 196 LEU 196 196 196 LEU LEU A . n A 1 197 LEU 197 197 197 LEU LEU A . n A 1 198 ASP 198 198 198 ASP ASP A . n A 1 199 VAL 199 199 199 VAL VAL A . n A 1 200 ASN 200 200 200 ASN ASN A . n A 1 201 PRO 201 201 201 PRO PRO A . n A 1 202 LYS 202 202 202 LYS LYS A . n A 1 203 PHE 203 203 203 PHE PHE A . n A 1 204 LEU 204 204 204 LEU LEU A . n A 1 205 LYS 205 205 205 LYS LYS A . n A 1 206 ASN 206 206 206 ASN ASN A . n A 1 207 ALA 207 207 207 ALA ALA A . n A 1 208 GLY 208 208 208 GLY GLY A . n A 1 209 ARG 209 209 209 ARG ARG A . n A 1 210 ASP 210 210 210 ASP ASP A . n A 1 211 CYS 211 211 211 CYS CYS A . n A 1 212 SER 212 212 212 SER SER A . n A 1 213 ARG 213 213 213 ARG ARG A . n A 1 214 ARG 214 214 214 ARG ARG A . n A 1 215 SER 215 215 215 SER SER A . n A 1 216 SER 216 216 216 SER SER A . n A 1 217 PRO 217 217 217 PRO PRO A . n A 1 218 VAL 218 218 218 VAL VAL A . n A 1 219 TYR 219 219 219 TYR TYR A . n A 1 220 VAL 220 220 220 VAL VAL A . n A 1 221 GLY 221 221 221 GLY GLY A . n A 1 222 ARG 222 222 222 ARG ARG A . n A 1 223 VAL 223 223 223 VAL VAL A . n A 1 224 VAL 224 224 224 VAL VAL A . n A 1 225 SER 225 225 225 SER SER A . n A 1 226 GLY 226 226 226 GLY GLY A . n A 1 227 MET 227 227 227 MET MET A . n A 1 228 VAL 228 228 228 VAL VAL A . n A 1 229 ASN 229 229 229 ASN ASN A . n A 1 230 CYS 230 230 230 CYS CYS A . n A 1 231 ASN 231 231 231 ASN ASN A . n A 1 232 ASP 232 232 232 ASP ASP A . n A 1 233 ASP 233 233 233 ASP ASP A . n A 1 234 GLN 234 234 234 GLN GLN A . n A 1 235 GLY 235 235 235 GLY GLY A . n A 1 236 VAL 236 236 236 VAL VAL A . n A 1 237 LEU 237 237 237 LEU LEU A . n A 1 238 LEU 238 238 238 LEU LEU A . n A 1 239 GLY 239 239 239 GLY GLY A . n A 1 240 ARG 240 240 240 ARG ARG A . n A 1 241 TRP 241 241 241 TRP TRP A . n A 1 242 ASP 242 242 242 ASP ASP A . n A 1 243 ASN 243 243 243 ASN ASN A . n A 1 244 ASN 244 244 244 ASN ASN A . n A 1 245 TYR 245 245 245 TYR TYR A . n A 1 246 GLY 246 246 246 GLY GLY A . n A 1 247 ASP 247 247 247 ASP ASP A . n A 1 248 GLY 248 248 248 GLY GLY A . n A 1 249 VAL 249 249 249 VAL VAL A . n A 1 250 SER 250 250 250 SER SER A . n A 1 251 PRO 251 251 251 PRO PRO A . n A 1 252 MET 252 252 252 MET MET A . n A 1 253 SER 253 253 253 SER SER A . n A 1 254 TRP 254 254 254 TRP TRP A . n A 1 255 ILE 255 255 255 ILE ILE A . n A 1 256 GLY 256 256 256 GLY GLY A . n A 1 257 SER 257 257 257 SER SER A . n A 1 258 VAL 258 258 258 VAL VAL A . n A 1 259 ASP 259 259 259 ASP ASP A . n A 1 260 ILE 260 260 260 ILE ILE A . n A 1 261 LEU 261 261 261 LEU LEU A . n A 1 262 ARG 262 262 262 ARG ARG A . n A 1 263 ARG 263 263 263 ARG ARG A . n A 1 264 TRP 264 264 264 TRP TRP A . n A 1 265 LYS 265 265 265 LYS LYS A . n A 1 266 ASN 266 266 266 ASN ASN A . n A 1 267 HIS 267 267 267 HIS HIS A . n A 1 268 GLY 268 268 268 GLY GLY A . n A 1 269 CYS 269 269 269 CYS CYS A . n A 1 270 GLN 270 270 270 GLN GLN A . n A 1 271 ARG 271 271 271 ARG ARG A . n A 1 272 VAL 272 272 272 VAL VAL A . n A 1 273 LYS 273 273 273 LYS LYS A . n A 1 274 TYR 274 274 274 TYR TYR A . n A 1 275 GLY 275 275 275 GLY GLY A . n A 1 276 GLN 276 276 276 GLN GLN A . n A 1 277 CYS 277 277 277 CYS CYS A . n A 1 278 TRP 278 278 278 TRP TRP A . n A 1 279 VAL 279 279 279 VAL VAL A . n A 1 280 PHE 280 280 280 PHE PHE A . n A 1 281 ALA 281 281 281 ALA ALA A . n A 1 282 ALA 282 282 282 ALA ALA A . n A 1 283 VAL 283 283 283 VAL VAL A . n A 1 284 ALA 284 284 284 ALA ALA A . n A 1 285 CYS 285 285 285 CYS CYS A . n A 1 286 THR 286 286 286 THR THR A . n A 1 287 VAL 287 287 287 VAL VAL A . n A 1 288 LEU 288 288 288 LEU LEU A . n A 1 289 ARG 289 289 289 ARG ARG A . n A 1 290 CYS 290 290 290 CYS CYS A . n A 1 291 LEU 291 291 291 LEU LEU A . n A 1 292 GLY 292 292 292 GLY GLY A . n A 1 293 ILE 293 293 293 ILE ILE A . n A 1 294 PRO 294 294 294 PRO PRO A . n A 1 295 THR 295 295 295 THR THR A . n A 1 296 ARG 296 296 296 ARG ARG A . n A 1 297 VAL 297 297 297 VAL VAL A . n A 1 298 VAL 298 298 298 VAL VAL A . n A 1 299 THR 299 299 299 THR THR A . n A 1 300 ASN 300 300 300 ASN ASN A . n A 1 301 TYR 301 301 301 TYR TYR A . n A 1 302 ASN 302 302 302 ASN ASN A . n A 1 303 SER 303 303 303 SER SER A . n A 1 304 ALA 304 304 304 ALA ALA A . n A 1 305 HIS 305 305 305 HIS HIS A . n A 1 306 ASP 306 306 306 ASP ASP A . n A 1 307 GLN 307 307 307 GLN GLN A . n A 1 308 ASN 308 308 308 ASN ASN A . n A 1 309 SER 309 309 309 SER SER A . n A 1 310 ASN 310 310 310 ASN ASN A . n A 1 311 LEU 311 311 311 LEU LEU A . n A 1 312 LEU 312 312 312 LEU LEU A . n A 1 313 ILE 313 313 313 ILE ILE A . n A 1 314 GLU 314 314 314 GLU GLU A . n A 1 315 TYR 315 315 315 TYR TYR A . n A 1 316 PHE 316 316 316 PHE PHE A . n A 1 317 ARG 317 317 317 ARG ARG A . n A 1 318 ASN 318 318 318 ASN ASN A . n A 1 319 GLU 319 319 319 GLU GLU A . n A 1 320 PHE 320 320 320 PHE PHE A . n A 1 321 GLY 321 321 321 GLY GLY A . n A 1 322 GLU 322 322 322 GLU GLU A . n A 1 323 ILE 323 323 323 ILE ILE A . n A 1 324 GLN 324 324 324 GLN GLN A . n A 1 325 GLY 325 325 325 GLY GLY A . n A 1 326 ASP 326 326 326 ASP ASP A . n A 1 327 LYS 327 327 327 LYS LYS A . n A 1 328 SER 328 328 328 SER SER A . n A 1 329 GLU 329 329 329 GLU GLU A . n A 1 330 MET 330 330 330 MET MET A . n A 1 331 ILE 331 331 331 ILE ILE A . n A 1 332 TRP 332 332 332 TRP TRP A . n A 1 333 ASN 333 333 333 ASN ASN A . n A 1 334 PHE 334 334 334 PHE PHE A . n A 1 335 HIS 335 335 335 HIS HIS A . n A 1 336 CYS 336 336 336 CYS CYS A . n A 1 337 TRP 337 337 337 TRP TRP A . n A 1 338 VAL 338 338 338 VAL VAL A . n A 1 339 GLU 339 339 339 GLU GLU A . n A 1 340 SER 340 340 340 SER SER A . n A 1 341 TRP 341 341 341 TRP TRP A . n A 1 342 MET 342 342 342 MET MET A . n A 1 343 THR 343 343 343 THR THR A . n A 1 344 ARG 344 344 344 ARG ARG A . n A 1 345 PRO 345 345 345 PRO PRO A . n A 1 346 ASP 346 346 346 ASP ASP A . n A 1 347 LEU 347 347 347 LEU LEU A . n A 1 348 GLN 348 348 348 GLN GLN A . n A 1 349 PRO 349 349 349 PRO PRO A . n A 1 350 GLY 350 350 350 GLY GLY A . n A 1 351 TYR 351 351 351 TYR TYR A . n A 1 352 GLU 352 352 352 GLU GLU A . n A 1 353 GLY 353 353 353 GLY GLY A . n A 1 354 TRP 354 354 354 TRP TRP A . n A 1 355 GLN 355 355 355 GLN GLN A . n A 1 356 ALA 356 356 356 ALA ALA A . n A 1 357 LEU 357 357 357 LEU LEU A . n A 1 358 ASP 358 358 358 ASP ASP A . n A 1 359 PRO 359 359 359 PRO PRO A . n A 1 360 THR 360 360 360 THR THR A . n A 1 361 PRO 361 361 361 PRO PRO A . n A 1 362 GLN 362 362 362 GLN GLN A . n A 1 363 GLU 363 363 363 GLU GLU A . n A 1 364 LYS 364 364 364 LYS LYS A . n A 1 365 SER 365 365 365 SER SER A . n A 1 366 GLU 366 366 366 GLU GLU A . n A 1 367 GLY 367 367 367 GLY GLY A . n A 1 368 THR 368 368 368 THR THR A . n A 1 369 TYR 369 369 369 TYR TYR A . n A 1 370 CYS 370 370 370 CYS CYS A . n A 1 371 CYS 371 371 371 CYS CYS A . n A 1 372 GLY 372 372 372 GLY GLY A . n A 1 373 PRO 373 373 373 PRO PRO A . n A 1 374 VAL 374 374 374 VAL VAL A . n A 1 375 PRO 375 375 375 PRO PRO A . n A 1 376 VAL 376 376 376 VAL VAL A . n A 1 377 ARG 377 377 377 ARG ARG A . n A 1 378 ALA 378 378 378 ALA ALA A . n A 1 379 ILE 379 379 379 ILE ILE A . n A 1 380 LYS 380 380 380 LYS LYS A . n A 1 381 GLU 381 381 381 GLU GLU A . n A 1 382 GLY 382 382 382 GLY GLY A . n A 1 383 ASP 383 383 383 ASP ASP A . n A 1 384 LEU 384 384 384 LEU LEU A . n A 1 385 SER 385 385 385 SER SER A . n A 1 386 THR 386 386 386 THR THR A . n A 1 387 LYS 387 387 387 LYS LYS A . n A 1 388 TYR 388 388 388 TYR TYR A . n A 1 389 ASP 389 389 389 ASP ASP A . n A 1 390 ALA 390 390 390 ALA ALA A . n A 1 391 PRO 391 391 391 PRO PRO A . n A 1 392 PHE 392 392 392 PHE PHE A . n A 1 393 VAL 393 393 393 VAL VAL A . n A 1 394 PHE 394 394 394 PHE PHE A . n A 1 395 ALA 395 395 395 ALA ALA A . n A 1 396 GLU 396 396 396 GLU GLU A . n A 1 397 VAL 397 397 397 VAL VAL A . n A 1 398 ASN 398 398 398 ASN ASN A . n A 1 399 ALA 399 399 399 ALA ALA A . n A 1 400 ASP 400 400 400 ASP ASP A . n A 1 401 VAL 401 401 401 VAL VAL A . n A 1 402 VAL 402 402 402 VAL VAL A . n A 1 403 ASP 403 403 403 ASP ASP A . n A 1 404 TRP 404 404 404 TRP TRP A . n A 1 405 ILE 405 405 405 ILE ILE A . n A 1 406 GLN 406 406 406 GLN GLN A . n A 1 407 GLN 407 407 407 GLN GLN A . n A 1 408 ASP 408 408 408 ASP ASP A . n A 1 409 ASP 409 409 409 ASP ASP A . n A 1 410 GLY 410 410 410 GLY GLY A . n A 1 411 SER 411 411 411 SER SER A . n A 1 412 VAL 412 412 412 VAL VAL A . n A 1 413 HIS 413 413 413 HIS HIS A . n A 1 414 LYS 414 414 414 LYS LYS A . n A 1 415 SER 415 415 415 SER SER A . n A 1 416 ILE 416 416 416 ILE ILE A . n A 1 417 ASN 417 417 417 ASN ASN A . n A 1 418 ARG 418 418 418 ARG ARG A . n A 1 419 SER 419 419 419 SER SER A . n A 1 420 LEU 420 420 420 LEU LEU A . n A 1 421 ILE 421 421 421 ILE ILE A . n A 1 422 VAL 422 422 422 VAL VAL A . n A 1 423 GLY 423 423 423 GLY GLY A . n A 1 424 LEU 424 424 424 LEU LEU A . n A 1 425 LYS 425 425 425 LYS LYS A . n A 1 426 ILE 426 426 426 ILE ILE A . n A 1 427 SER 427 427 427 SER SER A . n A 1 428 THR 428 428 428 THR THR A . n A 1 429 LYS 429 429 429 LYS LYS A . n A 1 430 SER 430 430 430 SER SER A . n A 1 431 VAL 431 431 431 VAL VAL A . n A 1 432 GLY 432 432 432 GLY GLY A . n A 1 433 ARG 433 433 433 ARG ARG A . n A 1 434 ASP 434 434 434 ASP ASP A . n A 1 435 GLU 435 435 435 GLU GLU A . n A 1 436 ARG 436 436 436 ARG ARG A . n A 1 437 GLU 437 437 437 GLU GLU A . n A 1 438 ASP 438 438 438 ASP ASP A . n A 1 439 ILE 439 439 439 ILE ILE A . n A 1 440 THR 440 440 440 THR THR A . n A 1 441 HIS 441 441 441 HIS HIS A . n A 1 442 THR 442 442 442 THR THR A . n A 1 443 TYR 443 443 443 TYR TYR A . n A 1 444 LYS 444 444 444 LYS LYS A . n A 1 445 TYR 445 445 445 TYR TYR A . n A 1 446 PRO 446 446 446 PRO PRO A . n A 1 447 GLU 447 447 447 GLU GLU A . n A 1 448 GLY 448 448 448 GLY GLY A . n A 1 449 SER 449 449 449 SER SER A . n A 1 450 SER 450 450 450 SER SER A . n A 1 451 GLU 451 451 451 GLU GLU A . n A 1 452 GLU 452 452 452 GLU GLU A . n A 1 453 ARG 453 453 453 ARG ARG A . n A 1 454 GLU 454 454 454 GLU GLU A . n A 1 455 ALA 455 455 455 ALA ALA A . n A 1 456 PHE 456 456 456 PHE PHE A . n A 1 457 THR 457 457 457 THR THR A . n A 1 458 ARG 458 458 458 ARG ARG A . n A 1 459 ALA 459 459 459 ALA ALA A . n A 1 460 ASN 460 460 460 ASN ASN A . n A 1 461 HIS 461 461 461 HIS HIS A . n A 1 462 LEU 462 462 462 LEU LEU A . n A 1 463 ASN 463 463 463 ASN ASN A . n A 1 464 LYS 464 464 464 LYS LYS A . n A 1 465 LEU 465 465 465 LEU LEU A . n A 1 466 ALA 466 466 466 ALA ALA A . n A 1 467 GLU 467 467 467 GLU GLU A . n A 1 468 LYS 468 468 468 LYS LYS A . n A 1 469 GLU 469 469 469 GLU GLU A . n A 1 470 GLU 470 470 470 GLU GLU A . n A 1 471 THR 471 471 471 THR THR A . n A 1 472 GLY 472 472 472 GLY GLY A . n A 1 473 MET 473 473 473 MET MET A . n A 1 474 ALA 474 474 474 ALA ALA A . n A 1 475 MET 475 475 475 MET MET A . n A 1 476 ARG 476 476 476 ARG ARG A . n A 1 477 ILE 477 477 477 ILE ILE A . n A 1 478 ARG 478 478 478 ARG ARG A . n A 1 479 VAL 479 479 479 VAL VAL A . n A 1 480 GLY 480 480 480 GLY GLY A . n A 1 481 GLN 481 481 481 GLN GLN A . n A 1 482 SER 482 482 482 SER SER A . n A 1 483 MET 483 483 483 MET MET A . n A 1 484 ASN 484 484 484 ASN ASN A . n A 1 485 MET 485 485 485 MET MET A . n A 1 486 GLY 486 486 486 GLY GLY A . n A 1 487 SER 487 487 487 SER SER A . n A 1 488 ASP 488 488 488 ASP ASP A . n A 1 489 PHE 489 489 489 PHE PHE A . n A 1 490 ASP 490 490 490 ASP ASP A . n A 1 491 VAL 491 491 491 VAL VAL A . n A 1 492 PHE 492 492 492 PHE PHE A . n A 1 493 ALA 493 493 493 ALA ALA A . n A 1 494 HIS 494 494 494 HIS HIS A . n A 1 495 ILE 495 495 495 ILE ILE A . n A 1 496 THR 496 496 496 THR THR A . n A 1 497 ASN 497 497 497 ASN ASN A . n A 1 498 ASN 498 498 498 ASN ASN A . n A 1 499 THR 499 499 499 THR THR A . n A 1 500 ALA 500 500 500 ALA ALA A . n A 1 501 GLU 501 501 501 GLU GLU A . n A 1 502 GLU 502 502 502 GLU GLU A . n A 1 503 TYR 503 503 503 TYR TYR A . n A 1 504 VAL 504 504 504 VAL VAL A . n A 1 505 CYS 505 505 505 CYS CYS A . n A 1 506 ARG 506 506 506 ARG ARG A . n A 1 507 LEU 507 507 507 LEU LEU A . n A 1 508 LEU 508 508 508 LEU LEU A . n A 1 509 LEU 509 509 509 LEU LEU A . n A 1 510 CYS 510 510 510 CYS CYS A . n A 1 511 ALA 511 511 511 ALA ALA A . n A 1 512 ARG 512 512 512 ARG ARG A . n A 1 513 THR 513 513 513 THR THR A . n A 1 514 VAL 514 514 514 VAL VAL A . n A 1 515 SER 515 515 515 SER SER A . n A 1 516 TYR 516 516 516 TYR TYR A . n A 1 517 ASN 517 517 517 ASN ASN A . n A 1 518 GLY 518 518 518 GLY GLY A . n A 1 519 ILE 519 519 519 ILE ILE A . n A 1 520 LEU 520 520 520 LEU LEU A . n A 1 521 GLY 521 521 521 GLY GLY A . n A 1 522 PRO 522 522 522 PRO PRO A . n A 1 523 GLU 523 523 523 GLU GLU A . n A 1 524 CYS 524 524 524 CYS CYS A . n A 1 525 GLY 525 525 525 GLY GLY A . n A 1 526 THR 526 526 526 THR THR A . n A 1 527 LYS 527 527 527 LYS LYS A . n A 1 528 TYR 528 528 528 TYR TYR A . n A 1 529 LEU 529 529 529 LEU LEU A . n A 1 530 LEU 530 530 530 LEU LEU A . n A 1 531 ASN 531 531 531 ASN ASN A . n A 1 532 LEU 532 532 532 LEU LEU A . n A 1 533 ASN 533 533 533 ASN ASN A . n A 1 534 LEU 534 534 534 LEU LEU A . n A 1 535 GLU 535 535 535 GLU GLU A . n A 1 536 PRO 536 536 536 PRO PRO A . n A 1 537 PHE 537 537 537 PHE PHE A . n A 1 538 SER 538 538 538 SER SER A . n A 1 539 GLU 539 539 539 GLU GLU A . n A 1 540 LYS 540 540 540 LYS LYS A . n A 1 541 SER 541 541 541 SER SER A . n A 1 542 VAL 542 542 542 VAL VAL A . n A 1 543 PRO 543 543 543 PRO PRO A . n A 1 544 LEU 544 544 544 LEU LEU A . n A 1 545 CYS 545 545 545 CYS CYS A . n A 1 546 ILE 546 546 546 ILE ILE A . n A 1 547 LEU 547 547 547 LEU LEU A . n A 1 548 TYR 548 548 548 TYR TYR A . n A 1 549 GLU 549 549 549 GLU GLU A . n A 1 550 LYS 550 550 550 LYS LYS A . n A 1 551 TYR 551 551 551 TYR TYR A . n A 1 552 ARG 552 552 552 ARG ARG A . n A 1 553 ASP 553 553 553 ASP ASP A . n A 1 554 CYS 554 554 554 CYS CYS A . n A 1 555 LEU 555 555 555 LEU LEU A . n A 1 556 THR 556 556 556 THR THR A . n A 1 557 GLU 557 557 557 GLU GLU A . n A 1 558 SER 558 558 558 SER SER A . n A 1 559 ASN 559 559 559 ASN ASN A . n A 1 560 LEU 560 560 560 LEU LEU A . n A 1 561 ILE 561 561 561 ILE ILE A . n A 1 562 LYS 562 562 562 LYS LYS A . n A 1 563 VAL 563 563 563 VAL VAL A . n A 1 564 ARG 564 564 564 ARG ARG A . n A 1 565 ALA 565 565 565 ALA ALA A . n A 1 566 LEU 566 566 566 LEU LEU A . n A 1 567 LEU 567 567 567 LEU LEU A . n A 1 568 VAL 568 568 568 VAL VAL A . n A 1 569 GLU 569 569 569 GLU GLU A . n A 1 570 PRO 570 570 570 PRO PRO A . n A 1 571 VAL 571 571 571 VAL VAL A . n A 1 572 ILE 572 572 572 ILE ILE A . n A 1 573 ASN 573 573 573 ASN ASN A . n A 1 574 SER 574 574 574 SER SER A . n A 1 575 TYR 575 575 575 TYR TYR A . n A 1 576 LEU 576 576 576 LEU LEU A . n A 1 577 LEU 577 577 577 LEU LEU A . n A 1 578 ALA 578 578 578 ALA ALA A . n A 1 579 GLU 579 579 579 GLU GLU A . n A 1 580 ARG 580 580 580 ARG ARG A . n A 1 581 ASP 581 581 581 ASP ASP A . n A 1 582 LEU 582 582 582 LEU LEU A . n A 1 583 TYR 583 583 583 TYR TYR A . n A 1 584 LEU 584 584 584 LEU LEU A . n A 1 585 GLU 585 585 585 GLU GLU A . n A 1 586 ASN 586 586 586 ASN ASN A . n A 1 587 PRO 587 587 587 PRO PRO A . n A 1 588 GLU 588 588 588 GLU GLU A . n A 1 589 ILE 589 589 589 ILE ILE A . n A 1 590 LYS 590 590 590 LYS LYS A . n A 1 591 ILE 591 591 591 ILE ILE A . n A 1 592 ARG 592 592 592 ARG ARG A . n A 1 593 ILE 593 593 593 ILE ILE A . n A 1 594 LEU 594 594 594 LEU LEU A . n A 1 595 GLY 595 595 595 GLY GLY A . n A 1 596 GLU 596 596 596 GLU GLU A . n A 1 597 PRO 597 597 597 PRO PRO A . n A 1 598 LYS 598 598 598 LYS LYS A . n A 1 599 GLN 599 599 599 GLN GLN A . n A 1 600 LYS 600 600 600 LYS LYS A . n A 1 601 ARG 601 601 601 ARG ARG A . n A 1 602 LYS 602 602 602 LYS LYS A . n A 1 603 LEU 603 603 603 LEU LEU A . n A 1 604 VAL 604 604 604 VAL VAL A . n A 1 605 ALA 605 605 605 ALA ALA A . n A 1 606 GLU 606 606 606 GLU GLU A . n A 1 607 VAL 607 607 607 VAL VAL A . n A 1 608 SER 608 608 608 SER SER A . n A 1 609 LEU 609 609 609 LEU LEU A . n A 1 610 GLN 610 610 610 GLN GLN A . n A 1 611 ASN 611 611 611 ASN ASN A . n A 1 612 PRO 612 612 612 PRO PRO A . n A 1 613 LEU 613 613 613 LEU LEU A . n A 1 614 PRO 614 614 614 PRO PRO A . n A 1 615 VAL 615 615 615 VAL VAL A . n A 1 616 ALA 616 616 616 ALA ALA A . n A 1 617 LEU 617 617 617 LEU LEU A . n A 1 618 GLU 618 618 618 GLU GLU A . n A 1 619 GLY 619 619 619 GLY GLY A . n A 1 620 CYS 620 620 620 CYS CYS A . n A 1 621 THR 621 621 621 THR THR A . n A 1 622 PHE 622 622 622 PHE PHE A . n A 1 623 THR 623 623 623 THR THR A . n A 1 624 VAL 624 624 624 VAL VAL A . n A 1 625 GLU 625 625 625 GLU GLU A . n A 1 626 GLY 626 626 626 GLY GLY A . n A 1 627 ALA 627 627 627 ALA ALA A . n A 1 628 GLY 628 628 628 GLY GLY A . n A 1 629 LEU 629 629 629 LEU LEU A . n A 1 630 THR 630 630 630 THR THR A . n A 1 631 GLU 631 631 631 GLU GLU A . n A 1 632 GLU 632 632 632 GLU GLU A . n A 1 633 GLN 633 633 633 GLN GLN A . n A 1 634 LYS 634 634 634 LYS LYS A . n A 1 635 THR 635 635 635 THR THR A . n A 1 636 VAL 636 636 636 VAL VAL A . n A 1 637 GLU 637 637 637 GLU GLU A . n A 1 638 ILE 638 638 638 ILE ILE A . n A 1 639 PRO 639 639 639 PRO PRO A . n A 1 640 ASP 640 640 640 ASP ASP A . n A 1 641 PRO 641 641 641 PRO PRO A . n A 1 642 VAL 642 642 642 VAL VAL A . n A 1 643 GLU 643 643 643 GLU GLU A . n A 1 644 ALA 644 644 644 ALA ALA A . n A 1 645 GLY 645 645 645 GLY GLY A . n A 1 646 GLU 646 646 646 GLU GLU A . n A 1 647 GLU 647 647 647 GLU GLU A . n A 1 648 VAL 648 648 648 VAL VAL A . n A 1 649 LYS 649 649 649 LYS LYS A . n A 1 650 VAL 650 650 650 VAL VAL A . n A 1 651 ARG 651 651 651 ARG ARG A . n A 1 652 MET 652 652 652 MET MET A . n A 1 653 ASP 653 653 653 ASP ASP A . n A 1 654 LEU 654 654 654 LEU LEU A . n A 1 655 LEU 655 655 655 LEU LEU A . n A 1 656 PRO 656 656 656 PRO PRO A . n A 1 657 LEU 657 657 657 LEU LEU A . n A 1 658 HIS 658 658 658 HIS HIS A . n A 1 659 MET 659 659 659 MET MET A . n A 1 660 GLY 660 660 660 GLY GLY A . n A 1 661 LEU 661 661 661 LEU LEU A . n A 1 662 HIS 662 662 662 HIS HIS A . n A 1 663 LYS 663 663 663 LYS LYS A . n A 1 664 LEU 664 664 664 LEU LEU A . n A 1 665 VAL 665 665 665 VAL VAL A . n A 1 666 VAL 666 666 666 VAL VAL A . n A 1 667 ASN 667 667 667 ASN ASN A . n A 1 668 PHE 668 668 668 PHE PHE A . n A 1 669 GLU 669 669 669 GLU GLU A . n A 1 670 SER 670 670 670 SER SER A . n A 1 671 ASP 671 671 671 ASP ASP A . n A 1 672 LYS 672 672 672 LYS LYS A . n A 1 673 LEU 673 673 673 LEU LEU A . n A 1 674 LYS 674 674 674 LYS LYS A . n A 1 675 ALA 675 675 675 ALA ALA A . n A 1 676 VAL 676 676 676 VAL VAL A . n A 1 677 LYS 677 677 677 LYS LYS A . n A 1 678 GLY 678 678 678 GLY GLY A . n A 1 679 PHE 679 679 679 PHE PHE A . n A 1 680 ARG 680 680 680 ARG ARG A . n A 1 681 ASN 681 681 681 ASN ASN A . n A 1 682 VAL 682 682 682 VAL VAL A . n A 1 683 ILE 683 683 683 ILE ILE A . n A 1 684 ILE 684 684 684 ILE ILE A . n A 1 685 GLY 685 685 685 GLY GLY A . n A 1 686 PRO 686 686 686 PRO PRO A . n A 1 687 ALA 687 687 687 ALA ALA A . n # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id GDP _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 701 _pdbx_nonpoly_scheme.auth_seq_num 701 _pdbx_nonpoly_scheme.pdb_mon_id GDP _pdbx_nonpoly_scheme.auth_mon_id GDP _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8TR9 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8TR9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8TR9 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 99.32 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8TR9 _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high . _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method NONE _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.0030 ? 5568 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.4836 ? 7564 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.0418 ? 832 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.0027 ? 985 ? f_plane_restr ? ? 'ELECTRON MICROSCOPY' ? 4.3699 ? 757 ? f_dihedral_angle_d ? ? # _struct.entry_id 8TR9 _struct.title 'Cryo-EM structure of transglutaminase 2 bound to GDP' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8TR9 _struct_keywords.text 'GDP, Complex, Signaling, G-protein, Cancer, cryo-EM, TRANSFERASE' _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TGM2_HUMAN _struct_ref.pdbx_db_accession P21980 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAEELVLERCDLELETNGRDHHTADLCREKLVVRRGQPFWLTLHFEGRNYEASVDSLTFSVVTGPAPSQEAGTKARFPLR DAVEEGDWTATVVDQQDCTLSLQLTTPANAPIGLYRLSLEASTGYQGSSFVLGHFILLFNAWCPADAVYLDSEEERQEYV LTQQGFIYQGSAKFIKNIPWNFGQFEDGILDICLILLDVNPKFLKNAGRDCSRRSSPVYVGRVVSGMVNCNDDQGVLLGR WDNNYGDGVSPMSWIGSVDILRRWKNHGCQRVKYGQCWVFAAVACTVLRCLGIPTRVVTNYNSAHDQNSNLLIEYFRNEF GEIQGDKSEMIWNFHCWVESWMTRPDLQPGYEGWQALDPTPQEKSEGTYCCGPVPVRAIKEGDLSTKYDAPFVFAEVNAD VVDWIQQDDGSVHKSINRSLIVGLKISTKSVGRDEREDITHTYKYPEGSSEEREAFTRANHLNKLAEKEETGMAMRIRVG QSMNMGSDFDVFAHITNNTAEEYVCRLLLCARTVSYNGILGPECGTKYLLNLNLEPFSEKSVPLCILYEKYRDCLTESNL IKVRALLVEPVINSYLLAERDLYLENPEIKIRILGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEIPD PVEAGEEVKVRMDLLPLHMGLHKLVVNFESDKLKAVKGFRNVIIGPA ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8TR9 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 687 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P21980 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 687 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 687 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'electron microscopy' ? 2 1 SAXS ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLU A 13 ? HIS A 21 ? GLU A 13 HIS A 21 1 ? 9 HELX_P HELX_P2 AA2 GLU A 153 ? LEU A 161 ? GLU A 153 LEU A 161 1 ? 9 HELX_P HELX_P3 AA3 GLY A 188 ? ASP A 198 ? GLY A 188 ASP A 198 1 ? 11 HELX_P HELX_P4 AA4 ASN A 200 ? ASN A 206 ? ASN A 200 ASN A 206 1 ? 7 HELX_P HELX_P5 AA5 ASN A 206 ? ARG A 214 ? ASN A 206 ARG A 214 1 ? 9 HELX_P HELX_P6 AA6 SER A 216 ? MET A 227 ? SER A 216 MET A 227 1 ? 12 HELX_P HELX_P7 AA7 ASN A 244 ? GLY A 248 ? ASN A 244 GLY A 248 5 ? 5 HELX_P HELX_P8 AA8 SER A 250 ? TRP A 254 ? SER A 250 TRP A 254 5 ? 5 HELX_P HELX_P9 AA9 GLY A 256 ? HIS A 267 ? GLY A 256 HIS A 267 1 ? 12 HELX_P HELX_P10 AB1 GLN A 276 ? GLY A 292 ? GLN A 276 GLY A 292 1 ? 17 HELX_P HELX_P11 AB2 VAL A 376 ? GLU A 381 ? VAL A 376 GLU A 381 1 ? 6 HELX_P HELX_P12 AB3 ASP A 389 ? ALA A 399 ? ASP A 389 ALA A 399 1 ? 11 HELX_P HELX_P13 AB4 SER A 449 ? ALA A 459 ? SER A 449 ALA A 459 1 ? 11 HELX_P HELX_P14 AB5 LEU A 547 ? ARG A 552 ? LEU A 547 ARG A 552 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 5 ? AA3 ? 4 ? AA4 ? 2 ? AA5 ? 2 ? AA6 ? 6 ? AA7 ? 7 ? AA8 ? 3 ? AA9 ? 3 ? AB1 ? 4 ? AB2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA6 4 5 ? anti-parallel AA6 5 6 ? anti-parallel AA7 1 2 ? parallel AA7 2 3 ? anti-parallel AA7 3 4 ? parallel AA7 4 5 ? anti-parallel AA7 5 6 ? anti-parallel AA7 6 7 ? anti-parallel AA8 1 2 ? anti-parallel AA8 2 3 ? anti-parallel AA9 1 2 ? anti-parallel AA9 2 3 ? anti-parallel AB1 1 2 ? anti-parallel AB1 2 3 ? anti-parallel AB1 3 4 ? anti-parallel AB2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 7 ? ASP A 11 ? LEU A 7 ASP A 11 AA1 2 PHE A 39 ? PHE A 45 ? PHE A 39 PHE A 45 AA1 3 THR A 99 ? THR A 105 ? THR A 99 THR A 105 AA1 4 THR A 89 ? GLN A 96 ? THR A 89 GLN A 96 AA2 1 LEU A 31 ? ARG A 34 ? LEU A 31 ARG A 34 AA2 2 HIS A 134 ? LEU A 138 ? HIS A 134 LEU A 138 AA2 3 GLY A 113 ? THR A 123 ? GLY A 113 THR A 123 AA2 4 ASP A 55 ? THR A 63 ? ASP A 55 THR A 63 AA2 5 ALA A 75 ? PRO A 78 ? ALA A 75 PRO A 78 AA3 1 LEU A 31 ? ARG A 34 ? LEU A 31 ARG A 34 AA3 2 HIS A 134 ? LEU A 138 ? HIS A 134 LEU A 138 AA3 3 GLY A 113 ? THR A 123 ? GLY A 113 THR A 123 AA3 4 GLN A 126 ? SER A 129 ? GLN A 126 SER A 129 AA4 1 GLN A 164 ? GLY A 170 ? GLN A 164 GLY A 170 AA4 2 ILE A 175 ? ASN A 181 ? ILE A 175 ASN A 181 AA5 1 LEU A 237 ? GLY A 239 ? LEU A 237 GLY A 239 AA5 2 VAL A 272 ? GLY A 275 ? VAL A 272 GLY A 275 AA6 1 VAL A 374 ? PRO A 375 ? VAL A 374 PRO A 375 AA6 2 GLY A 353 ? LEU A 357 ? GLY A 353 LEU A 357 AA6 3 TRP A 332 ? MET A 342 ? TRP A 332 MET A 342 AA6 4 THR A 295 ? SER A 303 ? THR A 295 SER A 303 AA6 5 ILE A 426 ? LYS A 429 ? ILE A 426 LYS A 429 AA6 6 ARG A 436 ? ASP A 438 ? ARG A 436 ASP A 438 AA7 1 LEU A 312 ? ARG A 317 ? LEU A 312 ARG A 317 AA7 2 ASP A 400 ? GLN A 406 ? ASP A 400 GLN A 406 AA7 3 VAL A 412 ? ASN A 417 ? VAL A 412 ASN A 417 AA7 4 TYR A 575 ? TYR A 583 ? TYR A 575 TYR A 583 AA7 5 LEU A 560 ? VAL A 568 ? LEU A 560 VAL A 568 AA7 6 TYR A 503 ? VAL A 514 ? TYR A 503 VAL A 514 AA7 7 LEU A 520 ? LEU A 534 ? LEU A 520 LEU A 534 AA8 1 ALA A 474 ? ARG A 478 ? ALA A 474 ARG A 478 AA8 2 PHE A 489 ? THR A 496 ? PHE A 489 THR A 496 AA8 3 GLU A 539 ? ILE A 546 ? GLU A 539 ILE A 546 AA9 1 LYS A 590 ? LEU A 594 ? LYS A 590 LEU A 594 AA9 2 LEU A 603 ? GLN A 610 ? LEU A 603 GLN A 610 AA9 3 GLU A 647 ? LEU A 654 ? GLU A 647 LEU A 654 AB1 1 LYS A 634 ? GLU A 637 ? LYS A 634 GLU A 637 AB1 2 THR A 621 ? GLU A 625 ? THR A 621 GLU A 625 AB1 3 VAL A 665 ? PHE A 668 ? VAL A 665 PHE A 668 AB1 4 VAL A 676 ? GLY A 678 ? VAL A 676 GLY A 678 AB2 1 GLY A 660 ? LYS A 663 ? GLY A 660 LYS A 663 AB2 2 ASN A 681 ? ILE A 684 ? ASN A 681 ILE A 684 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ASP A 11 ? N ASP A 11 O THR A 42 ? O THR A 42 AA1 2 3 N LEU A 41 ? N LEU A 41 O LEU A 102 ? O LEU A 102 AA1 3 4 O SER A 101 ? O SER A 101 N ASP A 94 ? N ASP A 94 AA2 1 2 N VAL A 33 ? N VAL A 33 O ILE A 136 ? O ILE A 136 AA2 2 3 O PHE A 135 ? O PHE A 135 N TYR A 115 ? N TYR A 115 AA2 3 4 O SER A 122 ? O SER A 122 N SER A 56 ? N SER A 56 AA2 4 5 N VAL A 61 ? N VAL A 61 O ALA A 75 ? O ALA A 75 AA3 1 2 N VAL A 33 ? N VAL A 33 O ILE A 136 ? O ILE A 136 AA3 2 3 O PHE A 135 ? O PHE A 135 N TYR A 115 ? N TYR A 115 AA3 3 4 N THR A 123 ? N THR A 123 O GLN A 126 ? O GLN A 126 AA4 1 2 N ILE A 167 ? N ILE A 167 O ILE A 178 ? O ILE A 178 AA5 1 2 N LEU A 238 ? N LEU A 238 O VAL A 272 ? O VAL A 272 AA6 1 2 O VAL A 374 ? O VAL A 374 N ALA A 356 ? N ALA A 356 AA6 2 3 O GLY A 353 ? O GLY A 353 N MET A 342 ? N MET A 342 AA6 3 4 O ASN A 333 ? O ASN A 333 N ASN A 302 ? N ASN A 302 AA6 4 5 N THR A 299 ? N THR A 299 O SER A 427 ? O SER A 427 AA6 5 6 N THR A 428 ? N THR A 428 O GLU A 437 ? O GLU A 437 AA7 1 2 N ILE A 313 ? N ILE A 313 O ASP A 400 ? O ASP A 400 AA7 2 3 N ILE A 405 ? N ILE A 405 O HIS A 413 ? O HIS A 413 AA7 3 4 N ILE A 416 ? N ILE A 416 O TYR A 575 ? O TYR A 575 AA7 4 5 O LEU A 582 ? O LEU A 582 N ILE A 561 ? N ILE A 561 AA7 5 6 O ARG A 564 ? O ARG A 564 N CYS A 510 ? N CYS A 510 AA7 6 7 N ALA A 511 ? N ALA A 511 O CYS A 524 ? O CYS A 524 AA8 1 2 N ARG A 476 ? N ARG A 476 O HIS A 494 ? O HIS A 494 AA8 2 3 N ILE A 495 ? N ILE A 495 O LYS A 540 ? O LYS A 540 AA9 1 2 N LEU A 594 ? N LEU A 594 O VAL A 604 ? O VAL A 604 AA9 2 3 N VAL A 607 ? N VAL A 607 O VAL A 650 ? O VAL A 650 AB1 1 2 O LYS A 634 ? O LYS A 634 N VAL A 624 ? N VAL A 624 AB1 2 3 N GLU A 625 ? N GLU A 625 O VAL A 665 ? O VAL A 665 AB1 3 4 N VAL A 666 ? N VAL A 666 O GLY A 678 ? O GLY A 678 AB2 1 2 N GLY A 660 ? N GLY A 660 O ILE A 684 ? O ILE A 684 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 49 ? ? 59.01 -114.01 2 1 GLU A 85 ? ? -100.63 65.48 3 1 TYR A 274 ? ? 60.67 66.36 4 1 ALA A 304 ? ? -93.55 54.78 5 1 LEU A 462 ? ? -66.42 0.62 6 1 LYS A 674 ? ? -78.85 -167.29 # _space_group_symop.id 1 _space_group_symop.operation_xyz x,y,z # _pdbx_entry_details.entry_id 8TR9 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification ? # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8TR9 _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 8TR9 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.20 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 136297 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.5 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Transglutaminase 2 bound to GDP' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 8TR9 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TALOS ARCTICA' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 200 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1200 _em_imaging.nominal_defocus_max 2400 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material GOLD _em_sample_support.grid_mesh_size 200 _em_sample_support.grid_type 'UltrAuFoil R1.2/1.3' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 8TR9 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8TR9 _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A GLU 3 ? A GLU 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GDP PB P N N 88 GDP O1B O N N 89 GDP O2B O N N 90 GDP O3B O N N 91 GDP O3A O N N 92 GDP PA P N N 93 GDP O1A O N N 94 GDP O2A O N N 95 GDP "O5'" O N N 96 GDP "C5'" C N N 97 GDP "C4'" C N R 98 GDP "O4'" O N N 99 GDP "C3'" C N S 100 GDP "O3'" O N N 101 GDP "C2'" C N R 102 GDP "O2'" O N N 103 GDP "C1'" C N R 104 GDP N9 N Y N 105 GDP C8 C Y N 106 GDP N7 N Y N 107 GDP C5 C Y N 108 GDP C6 C N N 109 GDP O6 O N N 110 GDP N1 N N N 111 GDP C2 C N N 112 GDP N2 N N N 113 GDP N3 N N N 114 GDP C4 C Y N 115 GDP HOB2 H N N 116 GDP HOB3 H N N 117 GDP HOA2 H N N 118 GDP "H5'" H N N 119 GDP "H5''" H N N 120 GDP "H4'" H N N 121 GDP "H3'" H N N 122 GDP "HO3'" H N N 123 GDP "H2'" H N N 124 GDP "HO2'" H N N 125 GDP "H1'" H N N 126 GDP H8 H N N 127 GDP HN1 H N N 128 GDP HN21 H N N 129 GDP HN22 H N N 130 GLN N N N N 131 GLN CA C N S 132 GLN C C N N 133 GLN O O N N 134 GLN CB C N N 135 GLN CG C N N 136 GLN CD C N N 137 GLN OE1 O N N 138 GLN NE2 N N N 139 GLN OXT O N N 140 GLN H H N N 141 GLN H2 H N N 142 GLN HA H N N 143 GLN HB2 H N N 144 GLN HB3 H N N 145 GLN HG2 H N N 146 GLN HG3 H N N 147 GLN HE21 H N N 148 GLN HE22 H N N 149 GLN HXT H N N 150 GLU N N N N 151 GLU CA C N S 152 GLU C C N N 153 GLU O O N N 154 GLU CB C N N 155 GLU CG C N N 156 GLU CD C N N 157 GLU OE1 O N N 158 GLU OE2 O N N 159 GLU OXT O N N 160 GLU H H N N 161 GLU H2 H N N 162 GLU HA H N N 163 GLU HB2 H N N 164 GLU HB3 H N N 165 GLU HG2 H N N 166 GLU HG3 H N N 167 GLU HE2 H N N 168 GLU HXT H N N 169 GLY N N N N 170 GLY CA C N N 171 GLY C C N N 172 GLY O O N N 173 GLY OXT O N N 174 GLY H H N N 175 GLY H2 H N N 176 GLY HA2 H N N 177 GLY HA3 H N N 178 GLY HXT H N N 179 HIS N N N N 180 HIS CA C N S 181 HIS C C N N 182 HIS O O N N 183 HIS CB C N N 184 HIS CG C Y N 185 HIS ND1 N Y N 186 HIS CD2 C Y N 187 HIS CE1 C Y N 188 HIS NE2 N Y N 189 HIS OXT O N N 190 HIS H H N N 191 HIS H2 H N N 192 HIS HA H N N 193 HIS HB2 H N N 194 HIS HB3 H N N 195 HIS HD1 H N N 196 HIS HD2 H N N 197 HIS HE1 H N N 198 HIS HE2 H N N 199 HIS HXT H N N 200 ILE N N N N 201 ILE CA C N S 202 ILE C C N N 203 ILE O O N N 204 ILE CB C N S 205 ILE CG1 C N N 206 ILE CG2 C N N 207 ILE CD1 C N N 208 ILE OXT O N N 209 ILE H H N N 210 ILE H2 H N N 211 ILE HA H N N 212 ILE HB H N N 213 ILE HG12 H N N 214 ILE HG13 H N N 215 ILE HG21 H N N 216 ILE HG22 H N N 217 ILE HG23 H N N 218 ILE HD11 H N N 219 ILE HD12 H N N 220 ILE HD13 H N N 221 ILE HXT H N N 222 LEU N N N N 223 LEU CA C N S 224 LEU C C N N 225 LEU O O N N 226 LEU CB C N N 227 LEU CG C N N 228 LEU CD1 C N N 229 LEU CD2 C N N 230 LEU OXT O N N 231 LEU H H N N 232 LEU H2 H N N 233 LEU HA H N N 234 LEU HB2 H N N 235 LEU HB3 H N N 236 LEU HG H N N 237 LEU HD11 H N N 238 LEU HD12 H N N 239 LEU HD13 H N N 240 LEU HD21 H N N 241 LEU HD22 H N N 242 LEU HD23 H N N 243 LEU HXT H N N 244 LYS N N N N 245 LYS CA C N S 246 LYS C C N N 247 LYS O O N N 248 LYS CB C N N 249 LYS CG C N N 250 LYS CD C N N 251 LYS CE C N N 252 LYS NZ N N N 253 LYS OXT O N N 254 LYS H H N N 255 LYS H2 H N N 256 LYS HA H N N 257 LYS HB2 H N N 258 LYS HB3 H N N 259 LYS HG2 H N N 260 LYS HG3 H N N 261 LYS HD2 H N N 262 LYS HD3 H N N 263 LYS HE2 H N N 264 LYS HE3 H N N 265 LYS HZ1 H N N 266 LYS HZ2 H N N 267 LYS HZ3 H N N 268 LYS HXT H N N 269 MET N N N N 270 MET CA C N S 271 MET C C N N 272 MET O O N N 273 MET CB C N N 274 MET CG C N N 275 MET SD S N N 276 MET CE C N N 277 MET OXT O N N 278 MET H H N N 279 MET H2 H N N 280 MET HA H N N 281 MET HB2 H N N 282 MET HB3 H N N 283 MET HG2 H N N 284 MET HG3 H N N 285 MET HE1 H N N 286 MET HE2 H N N 287 MET HE3 H N N 288 MET HXT H N N 289 PHE N N N N 290 PHE CA C N S 291 PHE C C N N 292 PHE O O N N 293 PHE CB C N N 294 PHE CG C Y N 295 PHE CD1 C Y N 296 PHE CD2 C Y N 297 PHE CE1 C Y N 298 PHE CE2 C Y N 299 PHE CZ C Y N 300 PHE OXT O N N 301 PHE H H N N 302 PHE H2 H N N 303 PHE HA H N N 304 PHE HB2 H N N 305 PHE HB3 H N N 306 PHE HD1 H N N 307 PHE HD2 H N N 308 PHE HE1 H N N 309 PHE HE2 H N N 310 PHE HZ H N N 311 PHE HXT H N N 312 PRO N N N N 313 PRO CA C N S 314 PRO C C N N 315 PRO O O N N 316 PRO CB C N N 317 PRO CG C N N 318 PRO CD C N N 319 PRO OXT O N N 320 PRO H H N N 321 PRO HA H N N 322 PRO HB2 H N N 323 PRO HB3 H N N 324 PRO HG2 H N N 325 PRO HG3 H N N 326 PRO HD2 H N N 327 PRO HD3 H N N 328 PRO HXT H N N 329 SER N N N N 330 SER CA C N S 331 SER C C N N 332 SER O O N N 333 SER CB C N N 334 SER OG O N N 335 SER OXT O N N 336 SER H H N N 337 SER H2 H N N 338 SER HA H N N 339 SER HB2 H N N 340 SER HB3 H N N 341 SER HG H N N 342 SER HXT H N N 343 THR N N N N 344 THR CA C N S 345 THR C C N N 346 THR O O N N 347 THR CB C N R 348 THR OG1 O N N 349 THR CG2 C N N 350 THR OXT O N N 351 THR H H N N 352 THR H2 H N N 353 THR HA H N N 354 THR HB H N N 355 THR HG1 H N N 356 THR HG21 H N N 357 THR HG22 H N N 358 THR HG23 H N N 359 THR HXT H N N 360 TRP N N N N 361 TRP CA C N S 362 TRP C C N N 363 TRP O O N N 364 TRP CB C N N 365 TRP CG C Y N 366 TRP CD1 C Y N 367 TRP CD2 C Y N 368 TRP NE1 N Y N 369 TRP CE2 C Y N 370 TRP CE3 C Y N 371 TRP CZ2 C Y N 372 TRP CZ3 C Y N 373 TRP CH2 C Y N 374 TRP OXT O N N 375 TRP H H N N 376 TRP H2 H N N 377 TRP HA H N N 378 TRP HB2 H N N 379 TRP HB3 H N N 380 TRP HD1 H N N 381 TRP HE1 H N N 382 TRP HE3 H N N 383 TRP HZ2 H N N 384 TRP HZ3 H N N 385 TRP HH2 H N N 386 TRP HXT H N N 387 TYR N N N N 388 TYR CA C N S 389 TYR C C N N 390 TYR O O N N 391 TYR CB C N N 392 TYR CG C Y N 393 TYR CD1 C Y N 394 TYR CD2 C Y N 395 TYR CE1 C Y N 396 TYR CE2 C Y N 397 TYR CZ C Y N 398 TYR OH O N N 399 TYR OXT O N N 400 TYR H H N N 401 TYR H2 H N N 402 TYR HA H N N 403 TYR HB2 H N N 404 TYR HB3 H N N 405 TYR HD1 H N N 406 TYR HD2 H N N 407 TYR HE1 H N N 408 TYR HE2 H N N 409 TYR HH H N N 410 TYR HXT H N N 411 VAL N N N N 412 VAL CA C N S 413 VAL C C N N 414 VAL O O N N 415 VAL CB C N N 416 VAL CG1 C N N 417 VAL CG2 C N N 418 VAL OXT O N N 419 VAL H H N N 420 VAL H2 H N N 421 VAL HA H N N 422 VAL HB H N N 423 VAL HG11 H N N 424 VAL HG12 H N N 425 VAL HG13 H N N 426 VAL HG21 H N N 427 VAL HG22 H N N 428 VAL HG23 H N N 429 VAL HXT H N N 430 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GDP PB O1B doub N N 83 GDP PB O2B sing N N 84 GDP PB O3B sing N N 85 GDP PB O3A sing N N 86 GDP O2B HOB2 sing N N 87 GDP O3B HOB3 sing N N 88 GDP O3A PA sing N N 89 GDP PA O1A doub N N 90 GDP PA O2A sing N N 91 GDP PA "O5'" sing N N 92 GDP O2A HOA2 sing N N 93 GDP "O5'" "C5'" sing N N 94 GDP "C5'" "C4'" sing N N 95 GDP "C5'" "H5'" sing N N 96 GDP "C5'" "H5''" sing N N 97 GDP "C4'" "O4'" sing N N 98 GDP "C4'" "C3'" sing N N 99 GDP "C4'" "H4'" sing N N 100 GDP "O4'" "C1'" sing N N 101 GDP "C3'" "O3'" sing N N 102 GDP "C3'" "C2'" sing N N 103 GDP "C3'" "H3'" sing N N 104 GDP "O3'" "HO3'" sing N N 105 GDP "C2'" "O2'" sing N N 106 GDP "C2'" "C1'" sing N N 107 GDP "C2'" "H2'" sing N N 108 GDP "O2'" "HO2'" sing N N 109 GDP "C1'" N9 sing N N 110 GDP "C1'" "H1'" sing N N 111 GDP N9 C8 sing Y N 112 GDP N9 C4 sing Y N 113 GDP C8 N7 doub Y N 114 GDP C8 H8 sing N N 115 GDP N7 C5 sing Y N 116 GDP C5 C6 sing N N 117 GDP C5 C4 doub Y N 118 GDP C6 O6 doub N N 119 GDP C6 N1 sing N N 120 GDP N1 C2 sing N N 121 GDP N1 HN1 sing N N 122 GDP C2 N2 sing N N 123 GDP C2 N3 doub N N 124 GDP N2 HN21 sing N N 125 GDP N2 HN22 sing N N 126 GDP N3 C4 sing N N 127 GLN N CA sing N N 128 GLN N H sing N N 129 GLN N H2 sing N N 130 GLN CA C sing N N 131 GLN CA CB sing N N 132 GLN CA HA sing N N 133 GLN C O doub N N 134 GLN C OXT sing N N 135 GLN CB CG sing N N 136 GLN CB HB2 sing N N 137 GLN CB HB3 sing N N 138 GLN CG CD sing N N 139 GLN CG HG2 sing N N 140 GLN CG HG3 sing N N 141 GLN CD OE1 doub N N 142 GLN CD NE2 sing N N 143 GLN NE2 HE21 sing N N 144 GLN NE2 HE22 sing N N 145 GLN OXT HXT sing N N 146 GLU N CA sing N N 147 GLU N H sing N N 148 GLU N H2 sing N N 149 GLU CA C sing N N 150 GLU CA CB sing N N 151 GLU CA HA sing N N 152 GLU C O doub N N 153 GLU C OXT sing N N 154 GLU CB CG sing N N 155 GLU CB HB2 sing N N 156 GLU CB HB3 sing N N 157 GLU CG CD sing N N 158 GLU CG HG2 sing N N 159 GLU CG HG3 sing N N 160 GLU CD OE1 doub N N 161 GLU CD OE2 sing N N 162 GLU OE2 HE2 sing N N 163 GLU OXT HXT sing N N 164 GLY N CA sing N N 165 GLY N H sing N N 166 GLY N H2 sing N N 167 GLY CA C sing N N 168 GLY CA HA2 sing N N 169 GLY CA HA3 sing N N 170 GLY C O doub N N 171 GLY C OXT sing N N 172 GLY OXT HXT sing N N 173 HIS N CA sing N N 174 HIS N H sing N N 175 HIS N H2 sing N N 176 HIS CA C sing N N 177 HIS CA CB sing N N 178 HIS CA HA sing N N 179 HIS C O doub N N 180 HIS C OXT sing N N 181 HIS CB CG sing N N 182 HIS CB HB2 sing N N 183 HIS CB HB3 sing N N 184 HIS CG ND1 sing Y N 185 HIS CG CD2 doub Y N 186 HIS ND1 CE1 doub Y N 187 HIS ND1 HD1 sing N N 188 HIS CD2 NE2 sing Y N 189 HIS CD2 HD2 sing N N 190 HIS CE1 NE2 sing Y N 191 HIS CE1 HE1 sing N N 192 HIS NE2 HE2 sing N N 193 HIS OXT HXT sing N N 194 ILE N CA sing N N 195 ILE N H sing N N 196 ILE N H2 sing N N 197 ILE CA C sing N N 198 ILE CA CB sing N N 199 ILE CA HA sing N N 200 ILE C O doub N N 201 ILE C OXT sing N N 202 ILE CB CG1 sing N N 203 ILE CB CG2 sing N N 204 ILE CB HB sing N N 205 ILE CG1 CD1 sing N N 206 ILE CG1 HG12 sing N N 207 ILE CG1 HG13 sing N N 208 ILE CG2 HG21 sing N N 209 ILE CG2 HG22 sing N N 210 ILE CG2 HG23 sing N N 211 ILE CD1 HD11 sing N N 212 ILE CD1 HD12 sing N N 213 ILE CD1 HD13 sing N N 214 ILE OXT HXT sing N N 215 LEU N CA sing N N 216 LEU N H sing N N 217 LEU N H2 sing N N 218 LEU CA C sing N N 219 LEU CA CB sing N N 220 LEU CA HA sing N N 221 LEU C O doub N N 222 LEU C OXT sing N N 223 LEU CB CG sing N N 224 LEU CB HB2 sing N N 225 LEU CB HB3 sing N N 226 LEU CG CD1 sing N N 227 LEU CG CD2 sing N N 228 LEU CG HG sing N N 229 LEU CD1 HD11 sing N N 230 LEU CD1 HD12 sing N N 231 LEU CD1 HD13 sing N N 232 LEU CD2 HD21 sing N N 233 LEU CD2 HD22 sing N N 234 LEU CD2 HD23 sing N N 235 LEU OXT HXT sing N N 236 LYS N CA sing N N 237 LYS N H sing N N 238 LYS N H2 sing N N 239 LYS CA C sing N N 240 LYS CA CB sing N N 241 LYS CA HA sing N N 242 LYS C O doub N N 243 LYS C OXT sing N N 244 LYS CB CG sing N N 245 LYS CB HB2 sing N N 246 LYS CB HB3 sing N N 247 LYS CG CD sing N N 248 LYS CG HG2 sing N N 249 LYS CG HG3 sing N N 250 LYS CD CE sing N N 251 LYS CD HD2 sing N N 252 LYS CD HD3 sing N N 253 LYS CE NZ sing N N 254 LYS CE HE2 sing N N 255 LYS CE HE3 sing N N 256 LYS NZ HZ1 sing N N 257 LYS NZ HZ2 sing N N 258 LYS NZ HZ3 sing N N 259 LYS OXT HXT sing N N 260 MET N CA sing N N 261 MET N H sing N N 262 MET N H2 sing N N 263 MET CA C sing N N 264 MET CA CB sing N N 265 MET CA HA sing N N 266 MET C O doub N N 267 MET C OXT sing N N 268 MET CB CG sing N N 269 MET CB HB2 sing N N 270 MET CB HB3 sing N N 271 MET CG SD sing N N 272 MET CG HG2 sing N N 273 MET CG HG3 sing N N 274 MET SD CE sing N N 275 MET CE HE1 sing N N 276 MET CE HE2 sing N N 277 MET CE HE3 sing N N 278 MET OXT HXT sing N N 279 PHE N CA sing N N 280 PHE N H sing N N 281 PHE N H2 sing N N 282 PHE CA C sing N N 283 PHE CA CB sing N N 284 PHE CA HA sing N N 285 PHE C O doub N N 286 PHE C OXT sing N N 287 PHE CB CG sing N N 288 PHE CB HB2 sing N N 289 PHE CB HB3 sing N N 290 PHE CG CD1 doub Y N 291 PHE CG CD2 sing Y N 292 PHE CD1 CE1 sing Y N 293 PHE CD1 HD1 sing N N 294 PHE CD2 CE2 doub Y N 295 PHE CD2 HD2 sing N N 296 PHE CE1 CZ doub Y N 297 PHE CE1 HE1 sing N N 298 PHE CE2 CZ sing Y N 299 PHE CE2 HE2 sing N N 300 PHE CZ HZ sing N N 301 PHE OXT HXT sing N N 302 PRO N CA sing N N 303 PRO N CD sing N N 304 PRO N H sing N N 305 PRO CA C sing N N 306 PRO CA CB sing N N 307 PRO CA HA sing N N 308 PRO C O doub N N 309 PRO C OXT sing N N 310 PRO CB CG sing N N 311 PRO CB HB2 sing N N 312 PRO CB HB3 sing N N 313 PRO CG CD sing N N 314 PRO CG HG2 sing N N 315 PRO CG HG3 sing N N 316 PRO CD HD2 sing N N 317 PRO CD HD3 sing N N 318 PRO OXT HXT sing N N 319 SER N CA sing N N 320 SER N H sing N N 321 SER N H2 sing N N 322 SER CA C sing N N 323 SER CA CB sing N N 324 SER CA HA sing N N 325 SER C O doub N N 326 SER C OXT sing N N 327 SER CB OG sing N N 328 SER CB HB2 sing N N 329 SER CB HB3 sing N N 330 SER OG HG sing N N 331 SER OXT HXT sing N N 332 THR N CA sing N N 333 THR N H sing N N 334 THR N H2 sing N N 335 THR CA C sing N N 336 THR CA CB sing N N 337 THR CA HA sing N N 338 THR C O doub N N 339 THR C OXT sing N N 340 THR CB OG1 sing N N 341 THR CB CG2 sing N N 342 THR CB HB sing N N 343 THR OG1 HG1 sing N N 344 THR CG2 HG21 sing N N 345 THR CG2 HG22 sing N N 346 THR CG2 HG23 sing N N 347 THR OXT HXT sing N N 348 TRP N CA sing N N 349 TRP N H sing N N 350 TRP N H2 sing N N 351 TRP CA C sing N N 352 TRP CA CB sing N N 353 TRP CA HA sing N N 354 TRP C O doub N N 355 TRP C OXT sing N N 356 TRP CB CG sing N N 357 TRP CB HB2 sing N N 358 TRP CB HB3 sing N N 359 TRP CG CD1 doub Y N 360 TRP CG CD2 sing Y N 361 TRP CD1 NE1 sing Y N 362 TRP CD1 HD1 sing N N 363 TRP CD2 CE2 doub Y N 364 TRP CD2 CE3 sing Y N 365 TRP NE1 CE2 sing Y N 366 TRP NE1 HE1 sing N N 367 TRP CE2 CZ2 sing Y N 368 TRP CE3 CZ3 doub Y N 369 TRP CE3 HE3 sing N N 370 TRP CZ2 CH2 doub Y N 371 TRP CZ2 HZ2 sing N N 372 TRP CZ3 CH2 sing Y N 373 TRP CZ3 HZ3 sing N N 374 TRP CH2 HH2 sing N N 375 TRP OXT HXT sing N N 376 TYR N CA sing N N 377 TYR N H sing N N 378 TYR N H2 sing N N 379 TYR CA C sing N N 380 TYR CA CB sing N N 381 TYR CA HA sing N N 382 TYR C O doub N N 383 TYR C OXT sing N N 384 TYR CB CG sing N N 385 TYR CB HB2 sing N N 386 TYR CB HB3 sing N N 387 TYR CG CD1 doub Y N 388 TYR CG CD2 sing Y N 389 TYR CD1 CE1 sing Y N 390 TYR CD1 HD1 sing N N 391 TYR CD2 CE2 doub Y N 392 TYR CD2 HD2 sing N N 393 TYR CE1 CZ doub Y N 394 TYR CE1 HE1 sing N N 395 TYR CE2 CZ sing Y N 396 TYR CE2 HE2 sing N N 397 TYR CZ OH sing N N 398 TYR OH HH sing N N 399 TYR OXT HXT sing N N 400 VAL N CA sing N N 401 VAL N H sing N N 402 VAL N H2 sing N N 403 VAL CA C sing N N 404 VAL CA CB sing N N 405 VAL CA HA sing N N 406 VAL C O doub N N 407 VAL C OXT sing N N 408 VAL CB CG1 sing N N 409 VAL CB CG2 sing N N 410 VAL CB HB sing N N 411 VAL CG1 HG11 sing N N 412 VAL CG1 HG12 sing N N 413 VAL CG1 HG13 sing N N 414 VAL CG2 HG21 sing N N 415 VAL CG2 HG22 sing N N 416 VAL CG2 HG23 sing N N 417 VAL OXT HXT sing N N 418 # _em_admin.current_status REL _em_admin.deposition_date 2023-08-09 _em_admin.deposition_site RCSB _em_admin.entry_id 8TR9 _em_admin.last_update 2024-07-31 _em_admin.map_release_date 2024-07-31 _em_admin.title 'Cryo-EM structure of transglutaminase 2 bound to GDP' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type NONE # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 469008 _em_entity_assembly_recombinant.organism 'Escherichia coli BL21(DE3)' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 51.1 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? 'VOLUME SELECTION' ? 14 1 1 1 ? ? 'SERIES ALIGNMENT' ? 15 1 1 1 ? ? 'MOLECULAR REPLACEMENT' ? 16 1 1 1 ? ? 'LATTICE DISTORTION CORRECTION' ? 17 1 1 1 ? ? 'SYMMETRY DETERMINATION' ? 18 1 1 1 ? ? 'CRYSTALLOGRAPHY MERGING' ? 19 1 1 1 ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Cancer Institute (NIH/NCI)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number R01CA201402-09 _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id GDP _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id GDP _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _space_group.crystal_system triclinic _space_group.name_H-M_alt 'P 1' _space_group.IT_number 1 _space_group.name_Hall 'P 1' _space_group.id 1 # _atom_sites.entry_id 8TR9 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_