HEADER BIOSYNTHETIC PROTEIN 10-AUG-23 8TRW TITLE STRUCTURE OF HUMAN LIAS COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIPOYL SYNTHASE, MITOCHONDRIAL; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: LIAS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 561 KEYWDS LIPOYL SYNTHASE, LIAS, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR O.A.ESAKOVA,D.M.WARUI,S.S.NETI,J.N.ALUMASA,S.J.BOOKER REVDAT 2 04-MAR-26 8TRW 1 JRNL REVDAT 1 11-JUN-25 8TRW 0 JRNL AUTH O.A.ESAKOVA,D.M.WARUI,S.S.NETI,J.N.ALUMASA,S.J.BOOKER JRNL TITL STRUCTURAL BASIS FOR CATALYSIS BY HUMAN LIPOYL SYNTHASE. JRNL REF NAT COMMUN V. 16 6355 2025 JRNL REFN ESSN 2041-1723 JRNL PMID 40640146 JRNL DOI 10.1038/S41467-025-61393-X REMARK 2 REMARK 2 RESOLUTION. 1.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.54 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.08 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 79.0 REMARK 3 NUMBER OF REFLECTIONS : 75051 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.152 REMARK 3 FREE R VALUE : 0.180 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.220 REMARK 3 FREE R VALUE TEST SET COUNT : 3168 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 27.0800 - 4.3600 0.88 3506 152 0.1524 0.1675 REMARK 3 2 4.3600 - 3.4600 0.94 3724 167 0.1351 0.1848 REMARK 3 3 3.4600 - 3.0300 0.95 3743 163 0.1514 0.1774 REMARK 3 4 3.0300 - 2.7500 0.96 3813 172 0.1551 0.1943 REMARK 3 5 2.7500 - 2.5500 0.96 3786 170 0.1596 0.1998 REMARK 3 6 2.5500 - 2.4000 0.97 3838 172 0.1532 0.1632 REMARK 3 7 2.4000 - 2.2800 0.97 3774 170 0.1400 0.1833 REMARK 3 8 2.2800 - 2.1800 0.97 3874 166 0.1495 0.1872 REMARK 3 9 2.1800 - 2.1000 0.98 3838 176 0.1447 0.1713 REMARK 3 10 2.1000 - 2.0300 0.97 3865 170 0.1525 0.1960 REMARK 3 11 2.0300 - 1.9600 0.95 3754 164 0.1451 0.1782 REMARK 3 12 1.9600 - 1.9100 0.93 3654 157 0.1418 0.1493 REMARK 3 13 1.9100 - 1.8600 0.89 3517 149 0.1516 0.1678 REMARK 3 14 1.8600 - 1.8100 0.85 3347 153 0.1513 0.1573 REMARK 3 15 1.8100 - 1.7700 0.79 3139 142 0.1548 0.1792 REMARK 3 16 1.7700 - 1.7300 0.72 2848 124 0.1540 0.1733 REMARK 3 17 1.7300 - 1.7000 0.64 2547 106 0.1699 0.1843 REMARK 3 18 1.7000 - 1.6700 0.59 2344 102 0.1758 0.2084 REMARK 3 19 1.6700 - 1.6400 0.55 2200 95 0.1806 0.1897 REMARK 3 20 1.6400 - 1.6100 0.51 2024 89 0.1959 0.1952 REMARK 3 21 1.6100 - 1.5800 0.45 1794 80 0.2132 0.1904 REMARK 3 22 1.5800 - 1.5600 0.42 1632 70 0.2346 0.2933 REMARK 3 23 1.5600 - 1.5400 0.33 1322 59 0.2502 0.2332 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.160 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2548 REMARK 3 ANGLE : 1.182 3482 REMARK 3 CHIRALITY : 0.079 393 REMARK 3 PLANARITY : 0.013 440 REMARK 3 DIHEDRAL : 24.084 990 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 46.0838 15.7920 36.7668 REMARK 3 T TENSOR REMARK 3 T11: 0.0954 T22: 0.0771 REMARK 3 T33: 0.0871 T12: -0.0143 REMARK 3 T13: -0.0025 T23: 0.0177 REMARK 3 L TENSOR REMARK 3 L11: 1.4306 L22: 0.5425 REMARK 3 L33: 0.7364 L12: -0.2132 REMARK 3 L13: -0.1237 L23: -0.1326 REMARK 3 S TENSOR REMARK 3 S11: -0.0245 S12: -0.0473 S13: -0.0699 REMARK 3 S21: 0.0094 S22: 0.0106 S23: -0.0287 REMARK 3 S31: 0.0448 S32: 0.0141 S33: 0.0073 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8TRW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1000276530. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-OCT-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 199757 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.540 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.54 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.57 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.5, 0.2 M SODIUM REMARK 280 SULFATE, 30% (W/V) PEG 3350, 3% (W/V) D-(+)-TREHALOSE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 34.17650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 44.39450 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 54.08300 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 34.17650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 44.39450 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 54.08300 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 34.17650 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 44.39450 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 54.08300 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 34.17650 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 44.39450 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 54.08300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 579 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 725 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 729 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 802 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 LEU A 3 REMARK 465 ARG A 4 REMARK 465 CYS A 5 REMARK 465 GLY A 6 REMARK 465 ASP A 7 REMARK 465 ALA A 8 REMARK 465 ALA A 9 REMARK 465 ARG A 10 REMARK 465 THR A 11 REMARK 465 LEU A 12 REMARK 465 GLY A 13 REMARK 465 PRO A 14 REMARK 465 ARG A 15 REMARK 465 VAL A 16 REMARK 465 PHE A 17 REMARK 465 GLY A 18 REMARK 465 ARG A 19 REMARK 465 TYR A 20 REMARK 465 PHE A 21 REMARK 465 CYS A 22 REMARK 465 SER A 23 REMARK 465 PRO A 24 REMARK 465 VAL A 25 REMARK 465 ARG A 26 REMARK 465 PRO A 27 REMARK 465 LEU A 28 REMARK 465 SER A 29 REMARK 465 SER A 30 REMARK 465 LEU A 31 REMARK 465 PRO A 32 REMARK 465 ASP A 33 REMARK 465 LYS A 34 REMARK 465 LYS A 35 REMARK 465 LYS A 36 REMARK 465 GLU A 37 REMARK 465 LEU A 38 REMARK 465 LEU A 39 REMARK 465 GLN A 40 REMARK 465 ASN A 41 REMARK 465 GLY A 42 REMARK 465 PRO A 43 REMARK 465 ASP A 44 REMARK 465 LEU A 45 REMARK 465 GLN A 46 REMARK 465 ASP A 47 REMARK 465 PHE A 48 REMARK 465 VAL A 49 REMARK 465 SER A 50 REMARK 465 GLY A 51 REMARK 465 ASP A 52 REMARK 465 LEU A 53 REMARK 465 ALA A 54 REMARK 465 ASP A 55 REMARK 465 ARG A 56 REMARK 465 SER A 57 REMARK 465 THR A 58 REMARK 465 TRP A 59 REMARK 465 ASP A 60 REMARK 465 GLU A 61 REMARK 465 TYR A 62 REMARK 465 LYS A 63 REMARK 465 GLY A 64 REMARK 465 ASN A 65 REMARK 465 LEU A 66 REMARK 465 LYS A 67 REMARK 465 ARG A 68 REMARK 465 GLN A 69 REMARK 465 LYS A 70 REMARK 465 GLY A 71 REMARK 465 GLU A 72 REMARK 465 ARG A 73 REMARK 465 LEU A 74 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 599 O HOH A 773 2.13 REMARK 500 O HOH A 552 O HOH A 589 2.14 REMARK 500 O HOH A 621 O HOH A 770 2.17 REMARK 500 O HOH A 789 O HOH A 799 2.18 REMARK 500 O HOH A 749 O HOH A 756 2.18 REMARK 500 OD2 ASP A 183 O HOH A 501 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU A 298 O HOH A 825 7655 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 239 -43.80 70.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 865 DISTANCE = 6.35 ANGSTROMS REMARK 525 HOH A 866 DISTANCE = 6.42 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 404 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 106 SG REMARK 620 2 SF4 A 404 S1 108.2 REMARK 620 3 SF4 A 404 S3 118.0 106.2 REMARK 620 4 SF4 A 404 S4 113.6 104.7 105.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 404 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 111 SG REMARK 620 2 SF4 A 404 S1 108.2 REMARK 620 3 SF4 A 404 S2 110.8 105.9 REMARK 620 4 SF4 A 404 S3 120.8 105.6 104.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 404 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 117 SG REMARK 620 2 SF4 A 404 S1 112.5 REMARK 620 3 SF4 A 404 S2 109.4 105.8 REMARK 620 4 SF4 A 404 S4 117.0 104.6 106.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 403 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 137 SG REMARK 620 2 SF4 A 403 S1 114.0 REMARK 620 3 SF4 A 403 S3 114.7 105.4 REMARK 620 4 SF4 A 403 S4 111.2 106.5 104.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 403 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 141 SG REMARK 620 2 SF4 A 403 S2 113.2 REMARK 620 3 SF4 A 403 S3 106.1 108.1 REMARK 620 4 SF4 A 403 S4 120.4 103.9 104.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 403 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 144 SG REMARK 620 2 SF4 A 403 S1 119.8 REMARK 620 3 SF4 A 403 S2 110.3 105.0 REMARK 620 4 SF4 A 403 S3 108.2 105.0 107.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 404 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 352 OG REMARK 620 2 SF4 A 404 S2 115.7 REMARK 620 3 SF4 A 404 S3 118.3 103.6 REMARK 620 4 SF4 A 404 S4 106.6 108.4 103.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 403 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DTT A 401 S1 REMARK 620 2 SF4 A 403 S1 118.7 REMARK 620 3 SF4 A 403 S2 123.0 105.2 REMARK 620 4 SF4 A 403 S4 100.4 104.3 102.0 REMARK 620 5 DTT A 401 S1 6.3 113.9 129.3 98.3 REMARK 620 6 DTT A 401 O2 73.8 87.4 73.8 168.3 77.0 REMARK 620 N 1 2 3 4 5 DBREF 8TRW A 1 368 UNP O43766 LIAS_HUMAN 1 368 SEQADV 8TRW VAL A 253 UNP O43766 ALA 253 CONFLICT SEQRES 1 A 368 MET SER LEU ARG CYS GLY ASP ALA ALA ARG THR LEU GLY SEQRES 2 A 368 PRO ARG VAL PHE GLY ARG TYR PHE CYS SER PRO VAL ARG SEQRES 3 A 368 PRO LEU SER SER LEU PRO ASP LYS LYS LYS GLU LEU LEU SEQRES 4 A 368 GLN ASN GLY PRO ASP LEU GLN ASP PHE VAL SER GLY ASP SEQRES 5 A 368 LEU ALA ASP ARG SER THR TRP ASP GLU TYR LYS GLY ASN SEQRES 6 A 368 LEU LYS ARG GLN LYS GLY GLU ARG LEU ARG LEU PRO PRO SEQRES 7 A 368 TRP LEU LYS THR GLU ILE PRO MET GLY LYS ASN TYR ASN SEQRES 8 A 368 LYS LEU LYS ASN THR LEU ARG ASN LEU ASN LEU HIS THR SEQRES 9 A 368 VAL CYS GLU GLU ALA ARG CYS PRO ASN ILE GLY GLU CYS SEQRES 10 A 368 TRP GLY GLY GLY GLU TYR ALA THR ALA THR ALA THR ILE SEQRES 11 A 368 MET LEU MET GLY ASP THR CYS THR ARG GLY CYS ARG PHE SEQRES 12 A 368 CYS SER VAL LYS THR ALA ARG ASN PRO PRO PRO LEU ASP SEQRES 13 A 368 ALA SER GLU PRO TYR ASN THR ALA LYS ALA ILE ALA GLU SEQRES 14 A 368 TRP GLY LEU ASP TYR VAL VAL LEU THR SER VAL ASP ARG SEQRES 15 A 368 ASP ASP MET PRO ASP GLY GLY ALA GLU HIS ILE ALA LYS SEQRES 16 A 368 THR VAL SER TYR LEU LYS GLU ARG ASN PRO LYS ILE LEU SEQRES 17 A 368 VAL GLU CYS LEU THR PRO ASP PHE ARG GLY ASP LEU LYS SEQRES 18 A 368 ALA ILE GLU LYS VAL ALA LEU SER GLY LEU ASP VAL TYR SEQRES 19 A 368 ALA HIS ASN VAL GLU THR VAL PRO GLU LEU GLN SER LYS SEQRES 20 A 368 VAL ARG ASP PRO ARG VAL ASN PHE ASP GLN SER LEU ARG SEQRES 21 A 368 VAL LEU LYS HIS ALA LYS LYS VAL GLN PRO ASP VAL ILE SEQRES 22 A 368 SER LYS THR SER ILE MET LEU GLY LEU GLY GLU ASN ASP SEQRES 23 A 368 GLU GLN VAL TYR ALA THR MET LYS ALA LEU ARG GLU ALA SEQRES 24 A 368 ASP VAL ASP CYS LEU THR LEU GLY GLN TYR MET GLN PRO SEQRES 25 A 368 THR ARG ARG HIS LEU LYS VAL GLU GLU TYR ILE THR PRO SEQRES 26 A 368 GLU LYS PHE LYS TYR TRP GLU LYS VAL GLY ASN GLU LEU SEQRES 27 A 368 GLY PHE HIS TYR THR ALA SER GLY PRO LEU VAL ARG SER SEQRES 28 A 368 SER TYR LYS ALA GLY GLU PHE PHE LEU LYS ASN LEU VAL SEQRES 29 A 368 ALA LYS ARG LYS HET GLC E 1 12 HET GLC E 2 11 HET DTT A 401 16 HET SO4 A 402 5 HET SF4 A 403 8 HET SF4 A 404 8 HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM DTT 2,3-DIHYDROXY-1,4-DITHIOBUTANE HETNAM SO4 SULFATE ION HETNAM SF4 IRON/SULFUR CLUSTER HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN DTT 1,4-DITHIOTHREITOL FORMUL 2 GLC 2(C6 H12 O6) FORMUL 3 DTT C4 H10 O2 S2 FORMUL 4 SO4 O4 S 2- FORMUL 5 SF4 2(FE4 S4) FORMUL 7 HOH *371(H2 O) HELIX 1 AA1 PRO A 77 LYS A 81 5 5 HELIX 2 AA2 GLY A 87 ASN A 99 1 13 HELIX 3 AA3 THR A 104 ALA A 109 1 6 HELIX 4 AA4 ASN A 113 TRP A 118 1 6 HELIX 5 AA5 SER A 158 GLY A 171 1 14 HELIX 6 AA6 GLY A 189 ASN A 204 1 16 HELIX 7 AA7 ASP A 215 GLY A 218 5 4 HELIX 8 AA8 ASP A 219 LEU A 228 1 10 HELIX 9 AA9 VAL A 241 GLU A 243 5 3 HELIX 10 AB1 LEU A 244 ARG A 249 1 6 HELIX 11 AB2 ASN A 254 GLN A 269 1 16 HELIX 12 AB3 ASN A 285 ALA A 299 1 15 HELIX 13 AB4 THR A 324 GLY A 339 1 16 HELIX 14 AB5 LYS A 354 LEU A 363 1 10 SHEET 1 AA1 7 THR A 127 MET A 131 0 SHEET 2 AA1 7 TYR A 174 THR A 178 1 O VAL A 176 N ILE A 130 SHEET 3 AA1 7 LEU A 208 LEU A 212 1 O GLU A 210 N LEU A 177 SHEET 4 AA1 7 VAL A 233 ALA A 235 1 O ALA A 235 N CYS A 211 SHEET 5 AA1 7 ILE A 273 LEU A 280 1 O ILE A 273 N TYR A 234 SHEET 6 AA1 7 CYS A 303 GLN A 308 1 O GLY A 307 N LEU A 280 SHEET 7 AA1 7 TYR A 342 SER A 345 1 O ALA A 344 N LEU A 306 SHEET 1 AA2 2 THR A 136 CYS A 137 0 SHEET 2 AA2 2 LYS A 147 THR A 148 1 O LYS A 147 N CYS A 137 LINK O1 GLC E 1 C1 GLC E 2 1555 1555 1.39 LINK SG CYS A 106 FE2 SF4 A 404 1555 1555 2.34 LINK SG CYS A 111 FE4 SF4 A 404 1555 1555 2.32 LINK SG CYS A 117 FE3 SF4 A 404 1555 1555 2.33 LINK SG CYS A 137 FE2 SF4 A 403 1555 1555 2.31 LINK SG CYS A 141 FE1 SF4 A 403 1555 1555 2.35 LINK SG CYS A 144 FE4 SF4 A 403 1555 1555 2.36 LINK OG SER A 352 FE1 SF4 A 404 1555 1555 2.08 LINK S1 ADTT A 401 FE3 SF4 A 403 1555 1555 2.42 LINK S1 BDTT A 401 FE3 SF4 A 403 1555 1555 2.33 LINK O2 BDTT A 401 FE3 SF4 A 403 1555 1555 2.60 CRYST1 68.353 88.789 108.166 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014630 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011263 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009245 0.00000 CONECT 272 2473 CONECT 312 2475 CONECT 354 2474 CONECT 499 2465 CONECT 535 2464 CONECT 563 2467 CONECT 2283 2472 CONECT 2420 2421 2426 2430 CONECT 2421 2420 2422 2427 CONECT 2422 2421 2423 2428 CONECT 2423 2422 2424 2429 CONECT 2424 2423 2425 2430 CONECT 2425 2424 2431 CONECT 2426 2420 2432 CONECT 2427 2421 CONECT 2428 2422 CONECT 2429 2423 CONECT 2430 2420 2424 CONECT 2431 2425 CONECT 2432 2426 2433 2441 CONECT 2433 2432 2434 2438 CONECT 2434 2433 2435 2439 CONECT 2435 2434 2436 2440 CONECT 2436 2435 2437 2441 CONECT 2437 2436 2442 CONECT 2438 2433 CONECT 2439 2434 CONECT 2440 2435 CONECT 2441 2432 2436 CONECT 2442 2437 CONECT 2443 2445 2466 CONECT 2444 2446 2466 CONECT 2445 2443 2447 CONECT 2446 2444 2448 CONECT 2447 2445 2449 2451 CONECT 2448 2446 2450 2452 CONECT 2449 2447 CONECT 2450 2448 2466 CONECT 2451 2447 2453 2455 CONECT 2452 2448 2454 2456 CONECT 2453 2451 CONECT 2454 2452 CONECT 2455 2451 2457 CONECT 2456 2452 2458 CONECT 2457 2455 CONECT 2458 2456 CONECT 2459 2460 2461 2462 2463 CONECT 2460 2459 CONECT 2461 2459 CONECT 2462 2459 CONECT 2463 2459 CONECT 2464 535 2469 2470 2471 CONECT 2465 499 2468 2470 2471 CONECT 2466 2443 2444 2450 2468 CONECT 2466 2469 2471 CONECT 2467 563 2468 2469 2470 CONECT 2468 2465 2466 2467 CONECT 2469 2464 2466 2467 CONECT 2470 2464 2465 2467 CONECT 2471 2464 2465 2466 CONECT 2472 2283 2477 2478 2479 CONECT 2473 272 2476 2478 2479 CONECT 2474 354 2476 2477 2479 CONECT 2475 312 2476 2477 2478 CONECT 2476 2473 2474 2475 CONECT 2477 2472 2474 2475 CONECT 2478 2472 2473 2475 CONECT 2479 2472 2473 2474 MASTER 477 0 6 14 9 0 0 6 2746 1 68 29 END