HEADER VIRAL PROTEIN 14-AUG-23 8TTO TITLE STRUCTURE OF HACHIMAN ANTI-DEFENSE 1 (HAD1) COMPND MOL_ID: 1; COMPND 2 MOLECULE: HACHIMAN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: PROPHAGE SEQUENCE ISOLATED AFTER INTEGRATION INTO COMPND 6 BACILLUS TOYONENSIS AFS058541 GENOME SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNIDENTIFIED; SOURCE 3 ORGANISM_TAXID: 32644; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS IMMUNE EVASION, ANTI-DEFENSE, PHAGE, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.E.RAGUCCI,S.P.ANTINE,P.J.KRANZSUCH REVDAT 3 17-JAN-24 8TTO 1 JRNL REVDAT 2 06-DEC-23 8TTO 1 JRNL REVDAT 1 22-NOV-23 8TTO 0 JRNL AUTH E.YIRMIYA,A.LEAVITT,A.LU,A.E.RAGUCCI,C.AVRAHAM,I.OSTERMAN, JRNL AUTH 2 J.GARB,S.P.ANTINE,S.E.MOONEY,S.J.HOBBS,P.J.KRANZUSCH, JRNL AUTH 3 G.AMITAI,R.SOREK JRNL TITL PHAGES OVERCOME BACTERIAL IMMUNITY VIA DIVERSE ANTI-DEFENCE JRNL TITL 2 PROTEINS. JRNL REF NATURE V. 625 352 2024 JRNL REFN ESSN 1476-4687 JRNL PMID 37992756 JRNL DOI 10.1038/S41586-023-06869-W REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.45 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.980 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 13350 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1333 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.4500 - 4.3100 0.98 1216 134 0.1750 0.1952 REMARK 3 2 4.3100 - 3.4200 0.98 1206 134 0.1703 0.2116 REMARK 3 3 3.4200 - 2.9900 0.98 1225 136 0.2137 0.2637 REMARK 3 4 2.9900 - 2.7100 0.98 1200 133 0.2308 0.2834 REMARK 3 5 2.7100 - 2.5200 0.98 1199 133 0.2445 0.2799 REMARK 3 6 2.5200 - 2.3700 0.98 1211 135 0.2474 0.2842 REMARK 3 7 2.3700 - 2.2500 0.97 1202 133 0.2552 0.3131 REMARK 3 8 2.2500 - 2.1500 0.96 1191 132 0.2674 0.3406 REMARK 3 9 2.1500 - 2.0700 0.96 1172 130 0.2892 0.3179 REMARK 3 10 2.0700 - 2.0000 0.95 1195 133 0.3237 0.3358 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.296 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.055 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.25 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.001 1385 REMARK 3 ANGLE : 0.400 1865 REMARK 3 CHIRALITY : 0.041 217 REMARK 3 PLANARITY : 0.002 211 REMARK 3 DIHEDRAL : 9.971 511 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 17 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.6689 43.5131 0.4374 REMARK 3 T TENSOR REMARK 3 T11: 0.2491 T22: 0.2834 REMARK 3 T33: 0.2467 T12: 0.0155 REMARK 3 T13: 0.0028 T23: -0.0510 REMARK 3 L TENSOR REMARK 3 L11: 2.8188 L22: 2.2193 REMARK 3 L33: 0.5518 L12: 0.3222 REMARK 3 L13: 0.8285 L23: 0.1216 REMARK 3 S TENSOR REMARK 3 S11: -0.0245 S12: -0.1994 S13: 0.1611 REMARK 3 S21: 0.1320 S22: 0.0396 S23: -0.0876 REMARK 3 S31: 0.0392 S32: -0.2330 S33: 0.0002 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 24 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.5567 57.4478 7.2890 REMARK 3 T TENSOR REMARK 3 T11: 0.3597 T22: 0.3529 REMARK 3 T33: 0.3371 T12: 0.0027 REMARK 3 T13: -0.0084 T23: -0.0169 REMARK 3 L TENSOR REMARK 3 L11: 1.1244 L22: 0.8804 REMARK 3 L33: 1.2454 L12: 0.9194 REMARK 3 L13: 0.5307 L23: 0.0793 REMARK 3 S TENSOR REMARK 3 S11: 0.3807 S12: 0.4753 S13: -0.0564 REMARK 3 S21: -0.5169 S22: -0.0964 S23: 0.0794 REMARK 3 S31: -0.0924 S32: -0.0519 S33: -0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 35 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.9854 38.8926 -4.1131 REMARK 3 T TENSOR REMARK 3 T11: 0.3755 T22: 0.2166 REMARK 3 T33: 0.2661 T12: 0.0027 REMARK 3 T13: -0.0041 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 1.2092 L22: 1.8998 REMARK 3 L33: 0.5675 L12: 1.5111 REMARK 3 L13: -0.2945 L23: -0.1225 REMARK 3 S TENSOR REMARK 3 S11: 0.1494 S12: -0.1593 S13: -0.0719 REMARK 3 S21: 0.1860 S22: -0.3462 S23: -0.8732 REMARK 3 S31: 0.1095 S32: -0.1741 S33: -0.0215 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 4 THROUGH 11 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.7321 36.4041 -0.2819 REMARK 3 T TENSOR REMARK 3 T11: 0.2893 T22: 0.2477 REMARK 3 T33: 0.3133 T12: -0.0165 REMARK 3 T13: 0.0625 T23: 0.0349 REMARK 3 L TENSOR REMARK 3 L11: 0.8660 L22: 0.2729 REMARK 3 L33: 0.3182 L12: -0.2272 REMARK 3 L13: -0.5061 L23: 0.2058 REMARK 3 S TENSOR REMARK 3 S11: 0.2061 S12: -0.3537 S13: 0.3224 REMARK 3 S21: -0.4868 S22: -0.0600 S23: 0.3096 REMARK 3 S31: -0.3112 S32: 0.2705 S33: -0.0015 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 12 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.6022 32.9657 5.7180 REMARK 3 T TENSOR REMARK 3 T11: 0.2832 T22: 0.3825 REMARK 3 T33: 0.2668 T12: -0.0597 REMARK 3 T13: -0.0139 T23: 0.0277 REMARK 3 L TENSOR REMARK 3 L11: 0.5281 L22: 0.6815 REMARK 3 L33: 0.5362 L12: 0.1313 REMARK 3 L13: 0.4336 L23: -0.3504 REMARK 3 S TENSOR REMARK 3 S11: 0.0863 S12: -0.0787 S13: -0.1341 REMARK 3 S21: 0.5081 S22: 0.0138 S23: 0.1304 REMARK 3 S31: -0.1650 S32: -0.2206 S33: -0.0001 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 24 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.7611 19.5852 13.1633 REMARK 3 T TENSOR REMARK 3 T11: 0.2936 T22: 0.3425 REMARK 3 T33: 0.3328 T12: -0.0123 REMARK 3 T13: -0.0467 T23: -0.0073 REMARK 3 L TENSOR REMARK 3 L11: 0.1637 L22: 1.3489 REMARK 3 L33: 0.3161 L12: -0.2301 REMARK 3 L13: 0.2150 L23: -0.5076 REMARK 3 S TENSOR REMARK 3 S11: -0.0533 S12: -0.2616 S13: -1.3393 REMARK 3 S21: 0.6120 S22: 0.0603 S23: -0.1331 REMARK 3 S31: 0.0561 S32: -0.5741 S33: 0.0552 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 29 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.4098 24.4100 6.6345 REMARK 3 T TENSOR REMARK 3 T11: 0.3022 T22: 0.2878 REMARK 3 T33: 0.2526 T12: -0.0354 REMARK 3 T13: 0.0195 T23: 0.0442 REMARK 3 L TENSOR REMARK 3 L11: 1.1150 L22: 0.1798 REMARK 3 L33: 0.3909 L12: 0.2662 REMARK 3 L13: -0.0391 L23: 0.2050 REMARK 3 S TENSOR REMARK 3 S11: 0.0746 S12: 0.6494 S13: -0.0710 REMARK 3 S21: 0.3265 S22: 0.0965 S23: -0.2182 REMARK 3 S31: -0.1405 S32: 0.3707 S33: -0.0017 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 35 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.9335 38.8648 -3.6117 REMARK 3 T TENSOR REMARK 3 T11: 0.2921 T22: 0.2388 REMARK 3 T33: 0.3105 T12: -0.0521 REMARK 3 T13: 0.0194 T23: -0.0166 REMARK 3 L TENSOR REMARK 3 L11: 2.7106 L22: 0.3637 REMARK 3 L33: 2.5298 L12: 0.4751 REMARK 3 L13: -0.0215 L23: 0.4653 REMARK 3 S TENSOR REMARK 3 S11: 0.3503 S12: -0.0238 S13: 0.2409 REMARK 3 S21: -0.3068 S22: -0.3842 S23: 0.0299 REMARK 3 S31: -0.0433 S32: 0.3442 S33: -0.0052 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 3 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.8528 30.3587 22.6338 REMARK 3 T TENSOR REMARK 3 T11: 0.3118 T22: 0.3041 REMARK 3 T33: 0.3035 T12: 0.0787 REMARK 3 T13: -0.0027 T23: -0.0040 REMARK 3 L TENSOR REMARK 3 L11: 2.9057 L22: 1.6356 REMARK 3 L33: 1.3951 L12: 0.6745 REMARK 3 L13: 1.4280 L23: -0.6756 REMARK 3 S TENSOR REMARK 3 S11: -0.0512 S12: -0.3178 S13: 0.1054 REMARK 3 S21: 0.2446 S22: 0.1372 S23: -0.0500 REMARK 3 S31: 0.0326 S32: -0.0470 S33: 0.0001 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 24 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.1512 47.7563 27.9873 REMARK 3 T TENSOR REMARK 3 T11: 0.3372 T22: 0.3249 REMARK 3 T33: 0.3505 T12: 0.0090 REMARK 3 T13: -0.0225 T23: -0.0839 REMARK 3 L TENSOR REMARK 3 L11: 0.4817 L22: 3.9248 REMARK 3 L33: 0.7211 L12: -0.0068 REMARK 3 L13: -0.5241 L23: 0.7224 REMARK 3 S TENSOR REMARK 3 S11: -0.2120 S12: 0.4765 S13: 0.1666 REMARK 3 S21: -1.5604 S22: -0.2518 S23: 1.5495 REMARK 3 S31: -0.6662 S32: -0.4081 S33: -0.0158 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 29 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.9257 42.2986 30.2650 REMARK 3 T TENSOR REMARK 3 T11: 0.2513 T22: 0.3389 REMARK 3 T33: 0.3076 T12: 0.0202 REMARK 3 T13: 0.0290 T23: 0.0046 REMARK 3 L TENSOR REMARK 3 L11: -0.0101 L22: 1.3465 REMARK 3 L33: 0.3613 L12: 0.0056 REMARK 3 L13: 0.0053 L23: 0.2727 REMARK 3 S TENSOR REMARK 3 S11: 0.3697 S12: 0.2922 S13: 0.1202 REMARK 3 S21: 0.4509 S22: -0.6010 S23: -0.3935 REMARK 3 S31: 0.3742 S32: 0.2077 S33: -0.0036 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 35 THROUGH 43 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.2770 27.4455 18.2083 REMARK 3 T TENSOR REMARK 3 T11: 0.3269 T22: 0.2054 REMARK 3 T33: 0.3099 T12: 0.0592 REMARK 3 T13: -0.0255 T23: 0.0293 REMARK 3 L TENSOR REMARK 3 L11: 0.8793 L22: 0.2735 REMARK 3 L33: 2.1668 L12: -0.3364 REMARK 3 L13: -1.1166 L23: 0.7633 REMARK 3 S TENSOR REMARK 3 S11: 0.4147 S12: 0.2584 S13: -0.1569 REMARK 3 S21: -0.2050 S22: -0.5797 S23: -0.1417 REMARK 3 S31: -0.4026 S32: -0.5918 S33: -0.1853 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 3 THROUGH 11 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.4707 24.6659 22.4013 REMARK 3 T TENSOR REMARK 3 T11: 0.3458 T22: 0.2698 REMARK 3 T33: 0.3109 T12: 0.0240 REMARK 3 T13: 0.0401 T23: 0.0182 REMARK 3 L TENSOR REMARK 3 L11: 1.0673 L22: 0.3449 REMARK 3 L33: 0.1750 L12: 0.2759 REMARK 3 L13: 0.2904 L23: -0.0919 REMARK 3 S TENSOR REMARK 3 S11: -0.2003 S12: -0.7234 S13: 0.4049 REMARK 3 S21: -0.0341 S22: -0.0643 S23: -0.0794 REMARK 3 S31: -0.0241 S32: 0.1411 S33: -0.0179 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 12 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.8758 19.7753 28.0032 REMARK 3 T TENSOR REMARK 3 T11: 0.3864 T22: 0.3253 REMARK 3 T33: 0.2716 T12: -0.0289 REMARK 3 T13: 0.0046 T23: 0.0470 REMARK 3 L TENSOR REMARK 3 L11: 0.4391 L22: 1.9075 REMARK 3 L33: 0.3616 L12: 0.1872 REMARK 3 L13: 0.3908 L23: -0.0574 REMARK 3 S TENSOR REMARK 3 S11: -0.0513 S12: -0.3917 S13: 0.0499 REMARK 3 S21: 0.7931 S22: 0.1705 S23: 0.3397 REMARK 3 S31: -0.0447 S32: -0.2624 S33: 0.0004 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 24 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.2102 7.1111 35.7641 REMARK 3 T TENSOR REMARK 3 T11: 0.2441 T22: 0.3532 REMARK 3 T33: 0.3473 T12: -0.0506 REMARK 3 T13: -0.0264 T23: 0.0615 REMARK 3 L TENSOR REMARK 3 L11: 0.1279 L22: 0.8903 REMARK 3 L33: 1.3482 L12: -0.0532 REMARK 3 L13: 0.1488 L23: 0.9482 REMARK 3 S TENSOR REMARK 3 S11: -0.5315 S12: -0.1154 S13: -0.5480 REMARK 3 S21: -0.2018 S22: 0.1193 S23: 0.1403 REMARK 3 S31: -0.3216 S32: -0.2546 S33: -0.0355 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 29 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.0023 11.5277 28.5799 REMARK 3 T TENSOR REMARK 3 T11: 0.1544 T22: 0.3167 REMARK 3 T33: 0.2806 T12: -0.0330 REMARK 3 T13: 0.0015 T23: 0.0611 REMARK 3 L TENSOR REMARK 3 L11: 0.5937 L22: 8.7757 REMARK 3 L33: 5.3226 L12: 1.4904 REMARK 3 L13: 0.1167 L23: -4.8442 REMARK 3 S TENSOR REMARK 3 S11: 0.2718 S12: 0.1928 S13: -0.3344 REMARK 3 S21: -1.2389 S22: -0.3094 S23: -0.2801 REMARK 3 S31: 0.7397 S32: 0.6790 S33: 0.0892 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 35 THROUGH 43 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.5942 23.9400 19.6836 REMARK 3 T TENSOR REMARK 3 T11: 0.2553 T22: 0.2106 REMARK 3 T33: 0.2320 T12: 0.0011 REMARK 3 T13: -0.0034 T23: 0.0102 REMARK 3 L TENSOR REMARK 3 L11: 0.7051 L22: 1.1229 REMARK 3 L33: 2.1148 L12: -0.0411 REMARK 3 L13: -1.0733 L23: -0.1829 REMARK 3 S TENSOR REMARK 3 S11: 0.3329 S12: -0.1040 S13: -0.0307 REMARK 3 S21: 0.7642 S22: -0.5781 S23: -0.2389 REMARK 3 S31: -0.2879 S32: 0.3675 S33: -0.0401 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8TTO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-SEP-23. REMARK 100 THE DEPOSITION ID IS D_1000276620. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUN-23 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00011 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13372 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 37.450 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 1.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES PH 6.2, 30% PEG 4000, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 ARG A 2 REMARK 465 GLU A 45 REMARK 465 GLU A 46 REMARK 465 THR A 47 REMARK 465 ASN A 48 REMARK 465 GLU A 49 REMARK 465 THR A 50 REMARK 465 LYS A 51 REMARK 465 THR A 52 REMARK 465 ASN A 53 REMARK 465 SER B 1 REMARK 465 ARG B 2 REMARK 465 LYS B 3 REMARK 465 GLU B 45 REMARK 465 GLU B 46 REMARK 465 THR B 47 REMARK 465 ASN B 48 REMARK 465 GLU B 49 REMARK 465 THR B 50 REMARK 465 LYS B 51 REMARK 465 THR B 52 REMARK 465 ASN B 53 REMARK 465 SER C 1 REMARK 465 ARG C 2 REMARK 465 GLU C 44 REMARK 465 GLU C 45 REMARK 465 GLU C 46 REMARK 465 THR C 47 REMARK 465 ASN C 48 REMARK 465 GLU C 49 REMARK 465 THR C 50 REMARK 465 LYS C 51 REMARK 465 THR C 52 REMARK 465 ASN C 53 REMARK 465 SER D 1 REMARK 465 ARG D 2 REMARK 465 GLU D 44 REMARK 465 GLU D 45 REMARK 465 GLU D 46 REMARK 465 THR D 47 REMARK 465 ASN D 48 REMARK 465 GLU D 49 REMARK 465 THR D 50 REMARK 465 LYS D 51 REMARK 465 THR D 52 REMARK 465 ASN D 53 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 109 O HOH B 124 1.80 REMARK 500 O HOH B 123 O HOH B 134 1.84 REMARK 500 O LYS A 3 O HOH A 101 1.88 REMARK 500 O HOH C 138 O HOH C 141 1.90 REMARK 500 O HOH C 115 O HOH C 147 1.96 REMARK 500 O HOH A 129 O HOH A 138 2.04 REMARK 500 O HOH C 119 O HOH C 140 2.05 REMARK 500 O HOH C 137 O HOH C 142 2.05 REMARK 500 O HOH C 124 O HOH C 138 2.16 REMARK 500 O HOH D 103 O HOH D 124 2.18 REMARK 500 OE2 GLU C 4 O HOH C 101 2.18 REMARK 500 N GLU C 4 O HOH C 102 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 116 O HOH C 127 1454 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 14 -73.79 -117.24 REMARK 500 ASN B 14 -70.30 -116.36 REMARK 500 LYS B 24 71.39 -106.41 REMARK 500 ASN C 14 -64.40 -128.82 REMARK 500 ASN D 14 -74.93 -117.19 REMARK 500 REMARK 500 REMARK: NULL DBREF 8TTO A 1 53 PDB 8TTO 8TTO 1 53 DBREF 8TTO B 1 53 PDB 8TTO 8TTO 1 53 DBREF 8TTO C 1 53 PDB 8TTO 8TTO 1 53 DBREF 8TTO D 1 53 PDB 8TTO 8TTO 1 53 SEQRES 1 A 53 SER ARG LYS GLU ILE ILE LEU THR VAL TRP THR ASN GLY SEQRES 2 A 53 ASN ALA ILE ARG LYS TYR THR GLY GLN ASP LYS THR ILE SEQRES 3 A 53 SER LYS TYR LYS LEU LYS ASP TRP TYR LYS ALA THR ALA SEQRES 4 A 53 VAL ILE THR LYS GLU GLU GLU THR ASN GLU THR LYS THR SEQRES 5 A 53 ASN SEQRES 1 B 53 SER ARG LYS GLU ILE ILE LEU THR VAL TRP THR ASN GLY SEQRES 2 B 53 ASN ALA ILE ARG LYS TYR THR GLY GLN ASP LYS THR ILE SEQRES 3 B 53 SER LYS TYR LYS LEU LYS ASP TRP TYR LYS ALA THR ALA SEQRES 4 B 53 VAL ILE THR LYS GLU GLU GLU THR ASN GLU THR LYS THR SEQRES 5 B 53 ASN SEQRES 1 C 53 SER ARG LYS GLU ILE ILE LEU THR VAL TRP THR ASN GLY SEQRES 2 C 53 ASN ALA ILE ARG LYS TYR THR GLY GLN ASP LYS THR ILE SEQRES 3 C 53 SER LYS TYR LYS LEU LYS ASP TRP TYR LYS ALA THR ALA SEQRES 4 C 53 VAL ILE THR LYS GLU GLU GLU THR ASN GLU THR LYS THR SEQRES 5 C 53 ASN SEQRES 1 D 53 SER ARG LYS GLU ILE ILE LEU THR VAL TRP THR ASN GLY SEQRES 2 D 53 ASN ALA ILE ARG LYS TYR THR GLY GLN ASP LYS THR ILE SEQRES 3 D 53 SER LYS TYR LYS LEU LYS ASP TRP TYR LYS ALA THR ALA SEQRES 4 D 53 VAL ILE THR LYS GLU GLU GLU THR ASN GLU THR LYS THR SEQRES 5 D 53 ASN FORMUL 5 HOH *172(H2 O) SHEET 1 AA1 6 ILE A 16 LYS A 18 0 SHEET 2 AA1 6 GLU A 4 THR A 11 -1 N TRP A 10 O ARG A 17 SHEET 3 AA1 6 TYR A 35 LYS A 43 -1 O ILE A 41 N ILE A 5 SHEET 4 AA1 6 TYR B 35 LYS B 43 -1 O THR B 38 N THR A 42 SHEET 5 AA1 6 ILE B 5 THR B 11 -1 N LEU B 7 O ALA B 39 SHEET 6 AA1 6 ILE B 16 LYS B 18 -1 O ARG B 17 N TRP B 10 SHEET 1 AA2 6 ILE C 16 LYS C 18 0 SHEET 2 AA2 6 GLU C 4 THR C 11 -1 N TRP C 10 O ARG C 17 SHEET 3 AA2 6 TYR C 35 THR C 42 -1 O ALA C 39 N LEU C 7 SHEET 4 AA2 6 TYR D 35 THR D 42 -1 O THR D 42 N THR C 38 SHEET 5 AA2 6 GLU D 4 THR D 11 -1 N LEU D 7 O ALA D 39 SHEET 6 AA2 6 ILE D 16 LYS D 18 -1 O ARG D 17 N TRP D 10 CRYST1 30.938 40.181 45.291 75.22 89.42 74.91 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.032323 -0.008715 0.002022 0.00000 SCALE2 0.000000 0.025776 -0.006984 0.00000 SCALE3 0.000000 0.000000 0.022877 0.00000