HEADER OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR 29-AUG-23 8U0Q TITLE CO-CRYSTAL STRUCTURE OF OPTIMIZED ANALOG TDI-13537 PROVIDED NEW TITLE 2 INSIGHTS INTO THE POTENCY DETERMINANTS OF THE SULFONAMIDE INHIBITOR TITLE 3 SERIES COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDROLIPOYL DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: LPD,COMPONENT OF PEROXYNITRITE REDUCTASE/PEROXIDASE COMPLEX, COMPND 5 COMPONENT OF PNR/P,DIHYDROLIPOAMIDE DEHYDROGENASE,E3 COMPONENT OF COMPND 6 ALPHA-KETOACID DEHYDROGENASE COMPLEXES; COMPND 7 EC: 1.8.1.4; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 STRAIN: ATCC 25618 / H37RV; SOURCE 5 GENE: LPDC, LPD, RV0462, MTV038.06; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS VIRTUAL SCREENING, TUBERCULOSIS, MYCOBACTERIA, LIPOAMIDE KEYWDS 2 DEHYDROGENASE, INHIBITOR, OXIDOREDUCTASE, OXIDOREDUCTASE- KEYWDS 3 OXIDOREDUCTASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.A.DEMENTIEV,M.MICHINO,J.VENDOME,J.GINN,R.BRYK,A.OLLAND REVDAT 1 03-JAN-24 8U0Q 0 JRNL AUTH M.MICHINO,A.BEAUTRAIT,N.A.BOYLES,A.NADUPALLI,A.DEMENTIEV, JRNL AUTH 2 S.SUN,J.GINN,L.BAXT,R.SUTO,R.BRYK,S.V.JEROME,D.J.HUGGINS, JRNL AUTH 3 J.VENDOME JRNL TITL SHAPE-BASED VIRTUAL SCREENING OF A BILLION-COMPOUND LIBRARY JRNL TITL 2 IDENTIFIES MYCOBACTERIAL LIPOAMIDE DEHYDROGENASE INHIBITORS. JRNL REF ACS BIO MED CHEM AU V. 3 507 2023 JRNL REFN ESSN 2694-2437 JRNL PMID 38144256 JRNL DOI 10.1021/ACSBIOMEDCHEMAU.3C00046 REMARK 2 REMARK 2 RESOLUTION. 1.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.53 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 113706 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 5677 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.5300 - 5.2500 1.00 3874 193 0.1691 0.1858 REMARK 3 2 5.2500 - 4.1700 1.00 3705 194 0.1350 0.1555 REMARK 3 3 4.1700 - 3.6400 1.00 3680 175 0.1330 0.1739 REMARK 3 4 3.6400 - 3.3100 1.00 3674 180 0.1425 0.1708 REMARK 3 5 3.3100 - 3.0700 1.00 3613 202 0.1539 0.1795 REMARK 3 6 3.0700 - 2.8900 1.00 3626 191 0.1534 0.1814 REMARK 3 7 2.8900 - 2.7400 1.00 3620 194 0.1602 0.2124 REMARK 3 8 2.7400 - 2.6300 1.00 3615 185 0.1608 0.2031 REMARK 3 9 2.6300 - 2.5200 1.00 3607 183 0.1692 0.2151 REMARK 3 10 2.5200 - 2.4400 1.00 3592 207 0.1656 0.2172 REMARK 3 11 2.4400 - 2.3600 1.00 3590 196 0.1700 0.2167 REMARK 3 12 2.3600 - 2.2900 1.00 3567 196 0.1689 0.2132 REMARK 3 13 2.2900 - 2.2300 1.00 3581 198 0.1679 0.2479 REMARK 3 14 2.2300 - 2.1800 1.00 3593 179 0.1861 0.2258 REMARK 3 15 2.1800 - 2.1300 1.00 3568 196 0.1948 0.2306 REMARK 3 16 2.1300 - 2.0800 1.00 3571 197 0.1928 0.2642 REMARK 3 17 2.0800 - 2.0400 1.00 3592 197 0.1978 0.2392 REMARK 3 18 2.0400 - 2.0000 1.00 3564 180 0.1981 0.2277 REMARK 3 19 2.0000 - 1.9700 1.00 3590 195 0.2088 0.2751 REMARK 3 20 1.9700 - 1.9300 1.00 3581 165 0.2118 0.2845 REMARK 3 21 1.9300 - 1.9000 1.00 3575 183 0.2288 0.2825 REMARK 3 22 1.9000 - 1.8700 1.00 3586 199 0.2358 0.2707 REMARK 3 23 1.8700 - 1.8500 1.00 3533 189 0.2514 0.3168 REMARK 3 24 1.8500 - 1.8200 1.00 3550 187 0.2771 0.3283 REMARK 3 25 1.8200 - 1.8000 1.00 3581 197 0.3012 0.3389 REMARK 3 26 1.8000 - 1.7700 1.00 3551 171 0.3238 0.3355 REMARK 3 27 1.7700 - 1.7500 1.00 3593 178 0.3477 0.3775 REMARK 3 28 1.7500 - 1.7300 1.00 3558 192 0.3819 0.4056 REMARK 3 29 1.7300 - 1.7100 1.00 3556 194 0.3847 0.4186 REMARK 3 30 1.7100 - 1.6900 1.00 3543 184 0.3709 0.4034 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.278 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.148 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 7449 REMARK 3 ANGLE : 1.367 10098 REMARK 3 CHIRALITY : 0.090 1149 REMARK 3 PLANARITY : 0.011 1271 REMARK 3 DIHEDRAL : 13.170 1094 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8U0Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1000277042. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-APR-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95367 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 113737 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.690 REMARK 200 RESOLUTION RANGE LOW (A) : 45.530 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 11.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.75 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-HCL, PH 8.5, 16% PEG 10000, REMARK 280 17.5% GLYCEROL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 41.66750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.90300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.96400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.90300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 41.66750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.96400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 20310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -80.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 64 CG CD CE NZ REMARK 470 LYS A 88 CG CD CE NZ REMARK 470 LYS B 67 CG CD CE NZ REMARK 470 LYS B 216 CG CD CE NZ REMARK 470 LYS B 224 CG CD CE NZ REMARK 470 LYS B 289 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 842 O HOH A 851 2.01 REMARK 500 O3 GOL A 520 O HOH A 601 2.05 REMARK 500 OE1 GLU A 169 O HOH A 602 2.05 REMARK 500 O HOH B 685 O HOH B 806 2.10 REMARK 500 OG SER A 72 O HOH A 603 2.11 REMARK 500 O3 GOL A 519 O HOH A 604 2.13 REMARK 500 O1 GOL A 507 O HOH A 605 2.14 REMARK 500 O HOH A 672 O HOH A 840 2.15 REMARK 500 O HOH A 648 O HOH A 841 2.15 REMARK 500 O HOH B 702 O HOH B 807 2.15 REMARK 500 OD2 ASP A 65 O HOH A 606 2.15 REMARK 500 O HOH B 858 O HOH B 859 2.16 REMARK 500 O HOH A 617 O HOH A 868 2.17 REMARK 500 O HOH A 805 O HOH A 864 2.18 REMARK 500 O HOH A 620 O HOH A 824 2.18 REMARK 500 O HOH A 799 O HOH A 809 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE B 62 O - C - N ANGL. DEV. = 10.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 35 -53.55 -140.18 REMARK 500 VAL A 44 15.88 -140.75 REMARK 500 ALA A 141 54.81 -141.13 REMARK 500 ALA A 179 45.30 -106.12 REMARK 500 ALA A 266 49.10 -143.29 REMARK 500 LYS B 35 -49.74 -144.60 REMARK 500 VAL B 44 16.57 -141.58 REMARK 500 THR B 63 -66.69 -121.05 REMARK 500 ASP B 117 -176.12 -170.10 REMARK 500 SER B 155 -168.51 -164.84 REMARK 500 ALA B 179 43.60 -105.89 REMARK 500 LEU B 314 98.53 -162.15 REMARK 500 REMARK 500 REMARK: NULL DBREF 8U0Q A 1 464 UNP P9WHH9 DLDH_MYCTU 1 464 DBREF 8U0Q B 1 464 UNP P9WHH9 DLDH_MYCTU 1 464 SEQADV 8U0Q GLY A -1 UNP P9WHH9 EXPRESSION TAG SEQADV 8U0Q SER A 0 UNP P9WHH9 EXPRESSION TAG SEQADV 8U0Q GLY B -1 UNP P9WHH9 EXPRESSION TAG SEQADV 8U0Q SER B 0 UNP P9WHH9 EXPRESSION TAG SEQRES 1 A 466 GLY SER MET THR HIS TYR ASP VAL VAL VAL LEU GLY ALA SEQRES 2 A 466 GLY PRO GLY GLY TYR VAL ALA ALA ILE ARG ALA ALA GLN SEQRES 3 A 466 LEU GLY LEU SER THR ALA ILE VAL GLU PRO LYS TYR TRP SEQRES 4 A 466 GLY GLY VAL CYS LEU ASN VAL GLY CYS ILE PRO SER LYS SEQRES 5 A 466 ALA LEU LEU ARG ASN ALA GLU LEU VAL HIS ILE PHE THR SEQRES 6 A 466 LYS ASP ALA LYS ALA PHE GLY ILE SER GLY GLU VAL THR SEQRES 7 A 466 PHE ASP TYR GLY ILE ALA TYR ASP ARG SER ARG LYS VAL SEQRES 8 A 466 ALA GLU GLY ARG VAL ALA GLY VAL HIS PHE LEU MET LYS SEQRES 9 A 466 LYS ASN LYS ILE THR GLU ILE HIS GLY TYR GLY THR PHE SEQRES 10 A 466 ALA ASP ALA ASN THR LEU LEU VAL ASP LEU ASN ASP GLY SEQRES 11 A 466 GLY THR GLU SER VAL THR PHE ASP ASN ALA ILE ILE ALA SEQRES 12 A 466 THR GLY SER SER THR ARG LEU VAL PRO GLY THR SER LEU SEQRES 13 A 466 SER ALA ASN VAL VAL THR TYR GLU GLU GLN ILE LEU SER SEQRES 14 A 466 ARG GLU LEU PRO LYS SER ILE ILE ILE ALA GLY ALA GLY SEQRES 15 A 466 ALA ILE GLY MET GLU PHE GLY TYR VAL LEU LYS ASN TYR SEQRES 16 A 466 GLY VAL ASP VAL THR ILE VAL GLU PHE LEU PRO ARG ALA SEQRES 17 A 466 LEU PRO ASN GLU ASP ALA ASP VAL SER LYS GLU ILE GLU SEQRES 18 A 466 LYS GLN PHE LYS LYS LEU GLY VAL THR ILE LEU THR ALA SEQRES 19 A 466 THR LYS VAL GLU SER ILE ALA ASP GLY GLY SER GLN VAL SEQRES 20 A 466 THR VAL THR VAL THR LYS ASP GLY VAL ALA GLN GLU LEU SEQRES 21 A 466 LYS ALA GLU LYS VAL LEU GLN ALA ILE GLY PHE ALA PRO SEQRES 22 A 466 ASN VAL GLU GLY TYR GLY LEU ASP LYS ALA GLY VAL ALA SEQRES 23 A 466 LEU THR ASP ARG LYS ALA ILE GLY VAL ASP ASP TYR MET SEQRES 24 A 466 ARG THR ASN VAL GLY HIS ILE TYR ALA ILE GLY ASP VAL SEQRES 25 A 466 ASN GLY LEU LEU GLN LEU ALA HIS VAL ALA GLU ALA GLN SEQRES 26 A 466 GLY VAL VAL ALA ALA GLU THR ILE ALA GLY ALA GLU THR SEQRES 27 A 466 LEU THR LEU GLY ASP HIS ARG MET LEU PRO ARG ALA THR SEQRES 28 A 466 PHE CYS GLN PRO ASN VAL ALA SER PHE GLY LEU THR GLU SEQRES 29 A 466 GLN GLN ALA ARG ASN GLU GLY TYR ASP VAL VAL VAL ALA SEQRES 30 A 466 LYS PHE PRO PHE THR ALA ASN ALA LYS ALA HIS GLY VAL SEQRES 31 A 466 GLY ASP PRO SER GLY PHE VAL LYS LEU VAL ALA ASP ALA SEQRES 32 A 466 LYS HIS GLY GLU LEU LEU GLY GLY HIS LEU VAL GLY HIS SEQRES 33 A 466 ASP VAL ALA GLU LEU LEU PRO GLU LEU THR LEU ALA GLN SEQRES 34 A 466 ARG TRP ASP LEU THR ALA SER GLU LEU ALA ARG ASN VAL SEQRES 35 A 466 HIS THR HIS PRO THR MET SER GLU ALA LEU GLN GLU CYS SEQRES 36 A 466 PHE HIS GLY LEU VAL GLY HIS MET ILE ASN PHE SEQRES 1 B 466 GLY SER MET THR HIS TYR ASP VAL VAL VAL LEU GLY ALA SEQRES 2 B 466 GLY PRO GLY GLY TYR VAL ALA ALA ILE ARG ALA ALA GLN SEQRES 3 B 466 LEU GLY LEU SER THR ALA ILE VAL GLU PRO LYS TYR TRP SEQRES 4 B 466 GLY GLY VAL CYS LEU ASN VAL GLY CYS ILE PRO SER LYS SEQRES 5 B 466 ALA LEU LEU ARG ASN ALA GLU LEU VAL HIS ILE PHE THR SEQRES 6 B 466 LYS ASP ALA LYS ALA PHE GLY ILE SER GLY GLU VAL THR SEQRES 7 B 466 PHE ASP TYR GLY ILE ALA TYR ASP ARG SER ARG LYS VAL SEQRES 8 B 466 ALA GLU GLY ARG VAL ALA GLY VAL HIS PHE LEU MET LYS SEQRES 9 B 466 LYS ASN LYS ILE THR GLU ILE HIS GLY TYR GLY THR PHE SEQRES 10 B 466 ALA ASP ALA ASN THR LEU LEU VAL ASP LEU ASN ASP GLY SEQRES 11 B 466 GLY THR GLU SER VAL THR PHE ASP ASN ALA ILE ILE ALA SEQRES 12 B 466 THR GLY SER SER THR ARG LEU VAL PRO GLY THR SER LEU SEQRES 13 B 466 SER ALA ASN VAL VAL THR TYR GLU GLU GLN ILE LEU SER SEQRES 14 B 466 ARG GLU LEU PRO LYS SER ILE ILE ILE ALA GLY ALA GLY SEQRES 15 B 466 ALA ILE GLY MET GLU PHE GLY TYR VAL LEU LYS ASN TYR SEQRES 16 B 466 GLY VAL ASP VAL THR ILE VAL GLU PHE LEU PRO ARG ALA SEQRES 17 B 466 LEU PRO ASN GLU ASP ALA ASP VAL SER LYS GLU ILE GLU SEQRES 18 B 466 LYS GLN PHE LYS LYS LEU GLY VAL THR ILE LEU THR ALA SEQRES 19 B 466 THR LYS VAL GLU SER ILE ALA ASP GLY GLY SER GLN VAL SEQRES 20 B 466 THR VAL THR VAL THR LYS ASP GLY VAL ALA GLN GLU LEU SEQRES 21 B 466 LYS ALA GLU LYS VAL LEU GLN ALA ILE GLY PHE ALA PRO SEQRES 22 B 466 ASN VAL GLU GLY TYR GLY LEU ASP LYS ALA GLY VAL ALA SEQRES 23 B 466 LEU THR ASP ARG LYS ALA ILE GLY VAL ASP ASP TYR MET SEQRES 24 B 466 ARG THR ASN VAL GLY HIS ILE TYR ALA ILE GLY ASP VAL SEQRES 25 B 466 ASN GLY LEU LEU GLN LEU ALA HIS VAL ALA GLU ALA GLN SEQRES 26 B 466 GLY VAL VAL ALA ALA GLU THR ILE ALA GLY ALA GLU THR SEQRES 27 B 466 LEU THR LEU GLY ASP HIS ARG MET LEU PRO ARG ALA THR SEQRES 28 B 466 PHE CYS GLN PRO ASN VAL ALA SER PHE GLY LEU THR GLU SEQRES 29 B 466 GLN GLN ALA ARG ASN GLU GLY TYR ASP VAL VAL VAL ALA SEQRES 30 B 466 LYS PHE PRO PHE THR ALA ASN ALA LYS ALA HIS GLY VAL SEQRES 31 B 466 GLY ASP PRO SER GLY PHE VAL LYS LEU VAL ALA ASP ALA SEQRES 32 B 466 LYS HIS GLY GLU LEU LEU GLY GLY HIS LEU VAL GLY HIS SEQRES 33 B 466 ASP VAL ALA GLU LEU LEU PRO GLU LEU THR LEU ALA GLN SEQRES 34 B 466 ARG TRP ASP LEU THR ALA SER GLU LEU ALA ARG ASN VAL SEQRES 35 B 466 HIS THR HIS PRO THR MET SER GLU ALA LEU GLN GLU CYS SEQRES 36 B 466 PHE HIS GLY LEU VAL GLY HIS MET ILE ASN PHE HET FAD A 501 53 HET U4I A 502 29 HET GOL A 503 6 HET GOL A 504 6 HET GOL A 505 6 HET GOL A 506 6 HET GOL A 507 6 HET GOL A 508 6 HET GOL A 509 6 HET GOL A 510 6 HET GOL A 511 6 HET GOL A 512 6 HET GOL A 513 6 HET GOL A 514 6 HET GOL A 515 6 HET GOL A 516 6 HET GOL A 517 6 HET GOL A 518 6 HET GOL A 519 6 HET GOL A 520 6 HET GOL A 521 6 HET GOL A 522 6 HET U4I A 523 29 HET GOL B 501 6 HET GOL B 502 6 HET FAD B 503 53 HET GOL B 504 6 HET GOL B 505 6 HET GOL B 506 6 HET GOL B 507 6 HET GOL B 508 6 HET GOL B 509 6 HET GOL B 510 6 HET GOL B 511 6 HET GOL B 512 6 HET GOL B 513 6 HET GOL B 514 6 HET GOL B 515 6 HET GOL B 516 6 HET GOL B 517 6 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM U4I N-(3-ACETAMIDOPHENYL)-N~2~-[3-(DIFLUOROMETHYL)-5- HETNAM 2 U4I METHYLBENZENE-1-SULFONYL]-N~2~-METHYLGLYCINAMIDE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 FAD 2(C27 H33 N9 O15 P2) FORMUL 4 U4I 2(C19 H21 F2 N3 O4 S) FORMUL 5 GOL 36(C3 H8 O3) FORMUL 43 HOH *547(H2 O) HELIX 1 AA1 GLY A 12 LEU A 25 1 14 HELIX 2 AA2 GLY A 38 GLY A 45 1 8 HELIX 3 AA3 GLY A 45 ALA A 66 1 22 HELIX 4 AA4 LYS A 67 PHE A 69 5 3 HELIX 5 AA5 ASP A 78 ASN A 104 1 27 HELIX 6 AA6 THR A 160 LEU A 166 1 7 HELIX 7 AA7 GLY A 180 TYR A 193 1 14 HELIX 8 AA8 ASP A 211 GLY A 226 1 16 HELIX 9 AA9 GLY A 277 GLY A 282 1 6 HELIX 10 AB1 GLY A 308 GLY A 312 5 5 HELIX 11 AB2 LEU A 316 GLY A 333 1 18 HELIX 12 AB3 ASP A 341 MET A 344 5 4 HELIX 13 AB4 THR A 361 GLU A 368 1 8 HELIX 14 AB5 ASN A 382 GLY A 389 1 8 HELIX 15 AB6 ASP A 415 GLU A 418 5 4 HELIX 16 AB7 LEU A 419 TRP A 429 1 11 HELIX 17 AB8 THR A 432 ALA A 437 1 6 HELIX 18 AB9 SER A 447 GLY A 459 1 13 HELIX 19 AC1 GLY B 12 LEU B 25 1 14 HELIX 20 AC2 GLY B 38 GLY B 45 1 8 HELIX 21 AC3 GLY B 45 ASP B 65 1 21 HELIX 22 AC4 ASP B 78 ASN B 104 1 27 HELIX 23 AC5 THR B 160 LEU B 166 1 7 HELIX 24 AC6 GLY B 180 TYR B 193 1 14 HELIX 25 AC7 ASP B 211 GLY B 226 1 16 HELIX 26 AC8 GLY B 277 GLY B 282 1 6 HELIX 27 AC9 GLY B 308 GLY B 312 5 5 HELIX 28 AD1 LEU B 316 GLY B 333 1 18 HELIX 29 AD2 ASP B 341 LEU B 345 5 5 HELIX 30 AD3 THR B 361 GLU B 368 1 8 HELIX 31 AD4 ASN B 382 GLY B 389 1 8 HELIX 32 AD5 ASP B 415 LEU B 419 5 5 HELIX 33 AD6 LEU B 420 TRP B 429 1 10 HELIX 34 AD7 THR B 432 ALA B 437 1 6 HELIX 35 AD8 SER B 447 GLY B 459 1 13 SHEET 1 AA1 6 THR A 107 ILE A 109 0 SHEET 2 AA1 6 THR A 29 VAL A 32 1 N ILE A 31 O ILE A 109 SHEET 3 AA1 6 THR A 2 LEU A 9 1 N VAL A 8 O VAL A 32 SHEET 4 AA1 6 THR A 130 ILE A 140 1 O ILE A 139 N LEU A 9 SHEET 5 AA1 6 THR A 120 LEU A 125 -1 N VAL A 123 O GLU A 131 SHEET 6 AA1 6 GLY A 111 ASP A 117 -1 N THR A 114 O LEU A 122 SHEET 1 AA2 5 THR A 107 ILE A 109 0 SHEET 2 AA2 5 THR A 29 VAL A 32 1 N ILE A 31 O ILE A 109 SHEET 3 AA2 5 THR A 2 LEU A 9 1 N VAL A 8 O VAL A 32 SHEET 4 AA2 5 THR A 130 ILE A 140 1 O ILE A 139 N LEU A 9 SHEET 5 AA2 5 ILE A 304 ALA A 306 1 O TYR A 305 N ILE A 140 SHEET 1 AA3 2 ILE A 71 SER A 72 0 SHEET 2 AA3 2 THR B 76 PHE B 77 -1 O THR B 76 N SER A 72 SHEET 1 AA4 2 THR A 76 PHE A 77 0 SHEET 2 AA4 2 ILE B 71 SER B 72 -1 O SER B 72 N THR A 76 SHEET 1 AA5 2 SER A 144 THR A 146 0 SHEET 2 AA5 2 PHE A 269 PRO A 271 -1 O ALA A 270 N SER A 145 SHEET 1 AA6 5 VAL A 158 VAL A 159 0 SHEET 2 AA6 5 LYS A 262 GLN A 265 1 O GLN A 265 N VAL A 159 SHEET 3 AA6 5 SER A 173 ALA A 177 1 N ALA A 177 O LEU A 264 SHEET 4 AA6 5 ASP A 196 VAL A 200 1 O THR A 198 N ILE A 176 SHEET 5 AA6 5 THR A 228 LEU A 230 1 O LEU A 230 N ILE A 199 SHEET 1 AA7 3 LYS A 234 ASP A 240 0 SHEET 2 AA7 3 VAL A 245 LYS A 251 -1 O THR A 248 N GLU A 236 SHEET 3 AA7 3 VAL A 254 ALA A 260 -1 O LEU A 258 N VAL A 247 SHEET 1 AA8 5 PRO A 346 THR A 349 0 SHEET 2 AA8 5 ASN A 354 GLY A 359 -1 O SER A 357 N ARG A 347 SHEET 3 AA8 5 LEU A 406 GLY A 413 -1 O LEU A 411 N ALA A 356 SHEET 4 AA8 5 PHE A 394 ASP A 400 -1 N VAL A 398 O LEU A 407 SHEET 5 AA8 5 VAL A 372 PRO A 378 -1 N VAL A 373 O ALA A 399 SHEET 1 AA9 6 THR B 107 ILE B 109 0 SHEET 2 AA9 6 THR B 29 VAL B 32 1 N ILE B 31 O ILE B 109 SHEET 3 AA9 6 THR B 2 LEU B 9 1 N VAL B 8 O VAL B 32 SHEET 4 AA9 6 THR B 130 ILE B 140 1 O ILE B 139 N LEU B 9 SHEET 5 AA9 6 THR B 120 LEU B 125 -1 N VAL B 123 O GLU B 131 SHEET 6 AA9 6 GLY B 111 ASP B 117 -1 N THR B 114 O LEU B 122 SHEET 1 AB1 5 THR B 107 ILE B 109 0 SHEET 2 AB1 5 THR B 29 VAL B 32 1 N ILE B 31 O ILE B 109 SHEET 3 AB1 5 THR B 2 LEU B 9 1 N VAL B 8 O VAL B 32 SHEET 4 AB1 5 THR B 130 ILE B 140 1 O ILE B 139 N LEU B 9 SHEET 5 AB1 5 ILE B 304 ALA B 306 1 O TYR B 305 N ILE B 140 SHEET 1 AB2 2 SER B 144 THR B 146 0 SHEET 2 AB2 2 PHE B 269 PRO B 271 -1 O ALA B 270 N SER B 145 SHEET 1 AB3 5 VAL B 158 VAL B 159 0 SHEET 2 AB3 5 LYS B 262 GLN B 265 1 O GLN B 265 N VAL B 159 SHEET 3 AB3 5 SER B 173 ALA B 177 1 N ALA B 177 O LEU B 264 SHEET 4 AB3 5 ASP B 196 VAL B 200 1 O THR B 198 N ILE B 176 SHEET 5 AB3 5 THR B 228 LEU B 230 1 O LEU B 230 N ILE B 199 SHEET 1 AB4 3 THR B 233 ASP B 240 0 SHEET 2 AB4 3 VAL B 245 LYS B 251 -1 O THR B 248 N GLU B 236 SHEET 3 AB4 3 VAL B 254 ALA B 260 -1 O ALA B 260 N VAL B 245 SHEET 1 AB5 5 ARG B 347 THR B 349 0 SHEET 2 AB5 5 ASN B 354 GLY B 359 -1 O SER B 357 N ARG B 347 SHEET 3 AB5 5 GLU B 405 GLY B 413 -1 O LEU B 411 N ALA B 356 SHEET 4 AB5 5 PHE B 394 ASP B 400 -1 N VAL B 398 O LEU B 407 SHEET 5 AB5 5 VAL B 372 PRO B 378 -1 N VAL B 373 O ALA B 399 SSBOND 1 CYS A 41 CYS A 46 1555 1555 2.12 SSBOND 2 CYS B 41 CYS B 46 1555 1555 2.14 CISPEP 1 GLN A 352 PRO A 353 0 -7.63 CISPEP 2 HIS A 443 PRO A 444 0 -7.10 CISPEP 3 GLN B 352 PRO B 353 0 2.67 CISPEP 4 GLN B 352 PRO B 353 0 2.70 CISPEP 5 HIS B 443 PRO B 444 0 -8.74 CRYST1 83.335 97.928 123.806 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012000 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010212 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008077 0.00000